Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_B03
         (806 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4XTQ6 Cluster: Putative uncharacterized protein; n=1; ...    37   0.52 
UniRef50_A7AXE7 Cluster: ClpC; n=1; Babesia bovis|Rep: ClpC - Ba...    33   8.5  

>UniRef50_Q4XTQ6 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 181

 Score = 37.1 bits (82), Expect = 0.52
 Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 2/102 (1%)
 Frame = -3

Query: 786 INLINYLFCH*XXXXXXXXXXXXX*VHALGTLYNRL-INVMKHEIVVNLIFYRVFLHSES 610
           INLI +L C                   +  +YN + IN MK    +N+IFY +   S S
Sbjct: 23  INLILFL-CEELLYIINKSMIYFNTTDYIRNVYNNVSINKMKQ---MNIIFYNILKQSPS 78

Query: 609 YFVRSVFLVFS*ALKVYKNIY-YLINSCVQYFRCLLFHLKTL 487
            F +++FL+F   +  YK ++ Y +   +  F  LLF  KT+
Sbjct: 79  IFYKNIFLLF---ISFYKKLFRYFVYLSIHNF-YLLFMKKTI 116


>UniRef50_A7AXE7 Cluster: ClpC; n=1; Babesia bovis|Rep: ClpC -
           Babesia bovis
          Length = 541

 Score = 33.1 bits (72), Expect = 8.5
 Identities = 33/115 (28%), Positives = 52/115 (45%), Gaps = 1/115 (0%)
 Frame = -3

Query: 708 HALGTLYNRLINVMKHEIVVNLIFYRVFLHSESYFVRSVFLVFS*ALKVYKNIYYLINSC 529
           H L  +Y+ LIN  K++ +  L  Y+V    +SY V    +V      +  N  Y+++  
Sbjct: 11  HYLYNVYD-LINDYKNKSIYKLFIYKVVKKKKSYVVDVDSMVHM-LQNIAHNTIYMVHDI 68

Query: 528 VQYFRCLLFHLKTLTVTYKS*LKIL*ISFV-CIKDVFTLSITR*IVLGSILFYYY 367
           V  F  +  + KT T T    L  L I+F+    D +   I    +LG IL  +Y
Sbjct: 69  VFKF-IIDINNKTNTKTTNKILNKLTINFIKLFGDKYIEKIKFVKILGKILIVFY 122


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 608,140,841
Number of Sequences: 1657284
Number of extensions: 10679423
Number of successful extensions: 17180
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 16384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17167
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 69554636255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)