Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_B01
(755 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor ... 96 3e-22
AY453651-1|AAR89057.1| 199|Tribolium castaneum serrate protein. 78 7e-17
AJ876407-1|CAI45288.1| 590|Tribolium castaneum phosphatase prot... 22 6.1
AJ621748-1|CAF21851.1| 228|Tribolium castaneum zinc finger tran... 22 6.1
AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein pr... 21 8.0
>AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor
protein protein.
Length = 585
Score = 95.9 bits (228), Expect = 3e-22
Identities = 47/138 (34%), Positives = 64/138 (46%), Gaps = 2/138 (1%)
Frame = +3
Query: 345 CSPSPCKNGGTCASSPRGEYYCNCTTRYAGEFCQ-HLNPCHSESSSRCQNXXXXXXXXXX 521
CS +PC+N TC + + +Y C C + G+ C + C + +
Sbjct: 103 CSTNPCENQATCVQN-KNQYQCLCGVGWTGKVCDVEMVSCKDAALRKVVPLKKLCNNGTC 161
Query: 522 XXXXXSFACDCPLGFSASLCEIRVPAACDSAPCLNGATCRLTSIETYECDCPPGYTGVEC 701
S C C G+S S C+ + CDSAPC NG TC L I +Y C CP G+ G C
Sbjct: 162 EDIGNSHRCHCSDGYSGSYCQTEINE-CDSAPCQNGGTC-LDLIGSYSCKCPKGFQGQNC 219
Query: 702 S-HEDHCASXPCRNGGRC 752
+ D C PC+NGG C
Sbjct: 220 ELNVDDCKPNPCQNGGTC 237
Score = 82.6 bits (195), Expect = 3e-18
Identities = 47/139 (33%), Positives = 63/139 (45%), Gaps = 3/139 (2%)
Frame = +3
Query: 345 CSPSPCKNGGTCASSPRGEYYCNCTTRYAGEFCQ-HLNPCHSESSSRCQNXXXXXXXXXX 521
C P C N GTC G + C C + G C+ +N C S+ C N
Sbjct: 264 CRPGACHNNGTCLDKVGG-FECKCPPGFVGPRCEGDINEC---LSNPCSNAGTLDCVQLV 319
Query: 522 XXXXXSFACDCPLGFSASLCEIRVPAACDSAPCLNGATCRLTSIET-YECDCPPGYTGVE 698
+ C+C LGF CE +V C ++PC NG C T+I ++C CP G+ G
Sbjct: 320 N----DYHCNCKLGFMGRHCESKVNF-CATSPCQNGGVC--TTIHAGHKCTCPEGFYGKN 372
Query: 699 CSHEDH-CASXPCRNGGRC 752
C + C S PC+NGG C
Sbjct: 373 CEFSGYDCDSNPCQNGGVC 391
Score = 81.8 bits (193), Expect = 5e-18
Identities = 45/119 (37%), Positives = 60/119 (50%), Gaps = 1/119 (0%)
Frame = +3
Query: 402 YYCNCTTRYAGEFCQHLNPCHSESSSRCQNXXXXXXXXXXXXXXXSFACDCPLGFSASLC 581
Y C C ++G CQ + +E+S C N S+ C C GF+ S C
Sbjct: 7 YTCTCPLGFSGINCQTNDEDCTETS--CMNGGTCIDGIN------SYICTCKPGFTGSNC 58
Query: 582 EIRVPAACDSAPCLNGATCRLTSIETYECDCPPGYTGVEC-SHEDHCASXPCRNGGRCV 755
+ R+ CDS+PCLNGATC+ Y C CP GYTG +C + D C++ PC N CV
Sbjct: 59 QNRINL-CDSSPCLNGATCQ-DHTTHYTCHCPYGYTGKDCGEYVDWCSTNPCENQATCV 115
Score = 77.4 bits (182), Expect = 1e-16
Identities = 45/139 (32%), Positives = 61/139 (43%), Gaps = 3/139 (2%)
Frame = +3
Query: 345 CSPSPCKNGGTCASSPRGEYYCNCTTRYAGEFCQ-HLNPCHSESSSRCQNXXXXXXXXXX 521
C P+PC+NGGTC + C+C + G C+ +++ C C N
Sbjct: 226 CKPNPCQNGGTCHDLV-NSFSCSCPSGTLGYICEINVDDCR---PGACHN------NGTC 275
Query: 522 XXXXXSFACDCPLGFSASLCEIRVPAACDSAPCLNGATCRLTS-IETYECDCPPGYTGVE 698
F C CP GF CE + C S PC N T + Y C+C G+ G
Sbjct: 276 LDKVGGFECKCPPGFVGPRCEGDI-NECLSNPCSNAGTLDCVQLVNDYHCNCKLGFMGRH 334
Query: 699 C-SHEDHCASXPCRNGGRC 752
C S + CA+ PC+NGG C
Sbjct: 335 CESKVNFCATSPCQNGGVC 353
Score = 73.3 bits (172), Expect = 2e-15
Identities = 41/124 (33%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
Frame = +3
Query: 345 CSPSPCKNGGTCASSPRGEYYCNCTTRYAGEFCQHLNPCHSESSSRCQNXXXXXXXXXXX 524
C+ SPC+NGG C + G + C C + G+ C+ + S+ CQN
Sbjct: 342 CATSPCQNGGVCTTIHAG-HKCTCPEGFYGKNCEFSG--YDCDSNPCQNGGVCRISDGG- 397
Query: 525 XXXXSFACDCPLGFSASLCEIRVPAACDSAPCLN-GATCRLTSIETYECDCPPGYTGVEC 701
+ CDCP G + + CEI CDS PC + A C+ + Y C CPP +TG C
Sbjct: 398 ----GYICDCPSGTNGTNCEIDTINECDSNPCKHLDAICQ-DKLGDYACYCPPKHTGKNC 452
Query: 702 SHED 713
D
Sbjct: 453 EIYD 456
Score = 70.9 bits (166), Expect = 1e-14
Identities = 31/73 (42%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +3
Query: 537 SFACDCPLGFSASLCEIRVPAACDSAPCLNGATCRLTSIETYECDCPPGYTGVECSHE-D 713
S+ C CPLGFS C+ C C+NG TC + I +Y C C PG+TG C + +
Sbjct: 6 SYTCTCPLGFSGINCQTN-DEDCTETSCMNGGTC-IDGINSYICTCKPGFTGSNCQNRIN 63
Query: 714 HCASXPCRNGGRC 752
C S PC NG C
Sbjct: 64 LCDSSPCLNGATC 76
Score = 70.1 bits (164), Expect = 2e-14
Identities = 42/147 (28%), Positives = 67/147 (45%), Gaps = 10/147 (6%)
Frame = +3
Query: 345 CSPSPCKNGGTCASSPRGEYYCNCTTRYAGEFC-QHLNPCHSESSSRCQNXXXXXXXXXX 521
C SPC NG TC Y C+C Y G+ C ++++ C S++ C+N
Sbjct: 65 CDSSPCLNGATCQDHTT-HYTCHCPYGYTGKDCGEYVDWC---STNPCENQATCVQNKN- 119
Query: 522 XXXXXSFACDCPLGFSASLCEIRVPAACDSA--------PCLNGATCRLTSIETYECDCP 677
+ C C +G++ +C++ + + D+A N TC ++ C C
Sbjct: 120 -----QYQCLCGVGWTGKVCDVEMVSCKDAALRKVVPLKKLCNNGTCEDIG-NSHRCHCS 173
Query: 678 PGYTGVECSHE-DHCASXPCRNGGRCV 755
GY+G C E + C S PC+NGG C+
Sbjct: 174 DGYSGSYCQTEINECDSAPCQNGGTCL 200
Score = 63.7 bits (148), Expect = 2e-12
Identities = 40/123 (32%), Positives = 53/123 (43%), Gaps = 1/123 (0%)
Frame = +3
Query: 345 CSPSPCKNGGTCASSPRGEYYCNCTTRYAGEFCQH-LNPCHSESSSRCQNXXXXXXXXXX 521
C+ + C NGGTC Y C C + G CQ+ +N C SS C N
Sbjct: 27 CTETSCMNGGTCIDG-INSYICTCKPGFTGSNCQNRINLC---DSSPCLN------GATC 76
Query: 522 XXXXXSFACDCPLGFSASLCEIRVPAACDSAPCLNGATCRLTSIETYECDCPPGYTGVEC 701
+ C CP G++ C V C + PC N ATC + + Y+C C G+TG C
Sbjct: 77 QDHTTHYTCHCPYGYTGKDCGEYVD-WCSTNPCENQATC-VQNKNQYQCLCGVGWTGKVC 134
Query: 702 SHE 710
E
Sbjct: 135 DVE 137
Score = 44.0 bits (99), Expect = 1e-06
Identities = 13/36 (36%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = +3
Query: 651 IETYECDCPPGYTGVEC-SHEDHCASXPCRNGGRCV 755
+++Y C CP G++G+ C ++++ C C NGG C+
Sbjct: 4 VDSYTCTCPLGFSGINCQTNDEDCTETSCMNGGTCI 39
>AY453651-1|AAR89057.1| 199|Tribolium castaneum serrate protein.
Length = 199
Score = 78.2 bits (184), Expect = 7e-17
Identities = 44/145 (30%), Positives = 66/145 (45%), Gaps = 2/145 (1%)
Frame = +3
Query: 324 GVEGFVSCSPSPCKNGGTCASSPRGEYYCNCTTRYAGEFC-QHLNPCHSESSSRCQNXXX 500
GV + +PS C G C + P + C C + G++C +++N C + C+N
Sbjct: 26 GVGSGRNSAPSICGEHGHCVNLPGVGHRCQCQPGFTGKYCHENINDC---KVNPCEN--- 79
Query: 501 XXXXXXXXXXXXSFACDCPLGFSASLCEIRVPAACDSAPCLNGATCRLTSIETYECDCPP 680
+F C C G+ +LC I C PC N +C + I +EC+C
Sbjct: 80 ---GGTCVDKINAFQCICKEGWEGALCNINTD-DCSPNPCRNNGSC-VDRIADFECNCKN 134
Query: 681 GYTGVECSHED-HCASXPCRNGGRC 752
G+ G CS +D HC C+NGG C
Sbjct: 135 GWKGKTCSLKDSHCDHTTCKNGGTC 159
Score = 69.7 bits (163), Expect = 2e-14
Identities = 41/142 (28%), Positives = 60/142 (42%), Gaps = 4/142 (2%)
Frame = +3
Query: 330 EGFVSCSPSPCKNGGTCASSPRGEYYCNCTTRYAGEFCQ-HLNPCHSESSSRCQNXXXXX 506
E C +PC+NGGTC + C C + G C + + C S + C+N
Sbjct: 67 ENINDCKVNPCENGGTCVDKINA-FQCICKEGWEGALCNINTDDC---SPNPCRNNGSCV 122
Query: 507 XXXXXXXXXXSFACDCPLGFSASLCEIRVPAACDSAPCLNGATCRLTSIETYECDCPPGY 686
F C+C G+ C ++ + CD C NG TC+ +T+ C CPP +
Sbjct: 123 DRIA------DFECNCKNGWKGKTCSLK-DSHCDHTTCKNGGTCQDLG-KTFMCRCPPDW 174
Query: 687 TGVECSHEDH---CASXPCRNG 743
G S + +S PC NG
Sbjct: 175 EGTTLSQSPNRRRASSNPCHNG 196
Score = 60.9 bits (141), Expect = 1e-11
Identities = 27/71 (38%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +3
Query: 546 CDCPLGFSASLCEIRVPAACDSAPCLNGATCRLTSIETYECDCPPGYTGVECS-HEDHCA 722
C C GF+ C + C PC NG TC + I ++C C G+ G C+ + D C+
Sbjct: 54 CQCQPGFTGKYCHENIND-CKVNPCENGGTC-VDKINAFQCICKEGWEGALCNINTDDCS 111
Query: 723 SXPCRNGGRCV 755
PCRN G CV
Sbjct: 112 PNPCRNNGSCV 122
>AJ876407-1|CAI45288.1| 590|Tribolium castaneum phosphatase
protein.
Length = 590
Score = 21.8 bits (44), Expect = 6.1
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +3
Query: 435 EFCQHLNPCHSES 473
+FCQ+L+ H ES
Sbjct: 310 DFCQNLDKAHQES 322
>AJ621748-1|CAF21851.1| 228|Tribolium castaneum zinc finger
transcription factor protein.
Length = 228
Score = 21.8 bits (44), Expect = 6.1
Identities = 10/27 (37%), Positives = 12/27 (44%), Gaps = 1/27 (3%)
Frame = +3
Query: 348 SPSPCKNGGTCASSPRGEYYCN-CTTR 425
S S CKN G C + + C C R
Sbjct: 38 SISECKNNGECVINKKNRTACKACRLR 64
>AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein
protein.
Length = 392
Score = 21.4 bits (43), Expect = 8.0
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -3
Query: 405 NIRLLVTMHRYHRSYTATVN 346
N+ + +TMH YH S + N
Sbjct: 150 NVSMNMTMHGYHPSSSYPAN 169
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,843
Number of Sequences: 336
Number of extensions: 3868
Number of successful extensions: 67
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20234955
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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