Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_B01
(755 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0527 + 3960982-3961290,3961371-3961464,3961898-3962084,396... 32 0.43
02_05_0044 - 25375239-25376233,25377233-25377364,25377586-25378504 32 0.43
01_03_0303 + 14792842-14792949,14793659-14793760,14794657-147948... 32 0.43
07_03_0009 + 12309789-12309842,12310337-12310505,12311039-123111... 31 0.99
04_03_0625 + 18126856-18127444,18127561-18127725,18127827-18127834 31 0.99
08_02_0421 - 16932354-16932427,16932909-16933076,16933443-16934544 31 1.3
09_04_0472 - 17895285-17896459,17897113-17897271,17897374-178977... 30 1.7
04_01_0609 + 7966263-7966366,7967945-7968706,7972607-7972851,797... 30 2.3
11_08_0004 + 27518384-27519018,27519147-27519397,27520437-275205... 29 4.0
09_04_0477 - 17932797-17933974,17934454-17934612,17934693-17934957 29 4.0
03_05_1019 + 29736644-29736709,29737156-29737515,29737595-297377... 29 4.0
10_08_0798 + 20649370-20649428,20649515-20649719 29 5.3
10_08_0026 - 14253680-14253894,14253981-14254109,14254704-142547... 29 5.3
10_01_0054 - 773395-774518,776957-777124,777455-778376 29 5.3
05_01_0126 + 858259-858489,858641-859189,859545-860162 29 5.3
04_03_0603 - 17898310-17899457,17899658-17899747,17900853-17901738 29 5.3
02_04_0206 + 20916063-20919669,20919816-20920014,20920935-209210... 29 5.3
01_03_0307 + 14879564-14879594,14880024-14880182,14880629-14881857 29 5.3
03_06_0369 + 33425251-33425778,33425864-33426051,33426152-334262... 28 7.0
02_05_0005 - 24890239-24891419,24891524-24891694,24891810-24892704 28 7.0
10_01_0083 - 1046086-1047086,1047976-1048161,1048266-1049247 28 9.2
10_01_0056 + 795258-796211 28 9.2
07_01_0479 + 3606663-3607448 28 9.2
02_05_1157 - 34533625-34533875,34535279-34536340,34536673-345368... 28 9.2
01_06_1740 - 39575614-39576981 28 9.2
01_05_0063 + 17764004-17764480 28 9.2
>03_01_0527 +
3960982-3961290,3961371-3961464,3961898-3962084,
3962194-3962449,3962561-3962773,3962856-3962942,
3963089-3963223,3963296-3963409,3963507-3963754,
3963824-3963904,3963979-3964210,3964340-3964438,
3964513-3964701,3964928-3965023
Length = 779
Score = 32.3 bits (70), Expect = 0.43
Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +3
Query: 546 CDCPL-GFSASLCEIRVPAACDSAPCLNGATCRLTSIETYECDCPPGYTGVECS 704
CDC G CE RV +C + C CR C C GY G++CS
Sbjct: 246 CDCKYDGLWGRFCETRVECSCINQ-CSGHGHCRGGF-----CQCDGGYFGIDCS 293
>02_05_0044 - 25375239-25376233,25377233-25377364,25377586-25378504
Length = 681
Score = 32.3 bits (70), Expect = 0.43
Identities = 21/69 (30%), Positives = 28/69 (40%), Gaps = 13/69 (18%)
Frame = +3
Query: 261 DYGIQLLSFVFLVTSAASRIEGVE-------------GFVSCSPSPCKNGGTCASSPRGE 401
DY ++ S +FL + S +EG E V+ S C G C + G
Sbjct: 224 DYYVRNASDLFLSWTNVSNVEGAELQFAITDQPSCGSALVNKSSYACTTGSNCQNISSGG 283
Query: 402 YYCNCTTRY 428
Y C CT RY
Sbjct: 284 YTCECTNRY 292
>01_03_0303 + 14792842-14792949,14793659-14793760,14794657-14794800,
14794906-14794986,14795078-14795147,14795267-14795337,
14795427-14795594,14796030-14796074,14796449-14796511,
14796594-14796869,14797858-14797971,14798099-14798225,
14798315-14798484,14798743-14798841,14799577-14799630,
14801487-14801522,14801741-14801844,14801952-14802186,
14802377-14802609,14802846-14803346,14803422-14803716,
14805796-14805881,14806952-14807064,14807303-14807385,
14808014-14808866,14809215-14809364,14809963-14811146
Length = 1854
Score = 32.3 bits (70), Expect = 0.43
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 5/53 (9%)
Frame = +3
Query: 540 FACDCPLGFSASL-----CEIRVPAACDSAPCLNGATCRLTSIETYECDCPPG 683
+ C+C LG+ + C + +PC GATCR T Y C CP G
Sbjct: 1391 YLCNCTLGYHGNPYITDGCIDVNECEQNQSPCPKGATCRNTE-GWYHCSCPVG 1442
>07_03_0009 +
12309789-12309842,12310337-12310505,12311039-12311175,
12311203-12311406
Length = 187
Score = 31.1 bits (67), Expect = 0.99
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = -2
Query: 610 ESHAAGTLISHNEALNPKGQSQAKD--GGPPPTPGLTRQVPPFW 485
ES G L +N+ NP+ Q + G PPP PG T+ P W
Sbjct: 129 ESWTFGVLNLNNKFANPQPQDEDLPPIGVPPPPPGPTQHQGPAW 172
>04_03_0625 + 18126856-18127444,18127561-18127725,18127827-18127834
Length = 253
Score = 31.1 bits (67), Expect = 0.99
Identities = 29/113 (25%), Positives = 44/113 (38%), Gaps = 2/113 (1%)
Frame = +3
Query: 231 YKMWSRNFVPDYGIQLLSFV-FLVTSAASRIEGVEGFVSCSPSPCKNGGTCASSPRGE-Y 404
Y M S F+ G ++ V + V +A++ +E + S + + C +S G Y
Sbjct: 120 YVMNSSQFIDTNGGRVPMVVDWAVQNASNCVEAQKDHDSYAC--ISSNSVCVNSSSGPGY 177
Query: 405 YCNCTTRYAGEFCQHLNPCHSESSSRCQNXXXXXXXXXXXXXXXSFACDCPLG 563
CNCT Y G L+ C + C+ SF C CP G
Sbjct: 178 ICNCTHGYQGN-PYLLHGC--QDIDECEEHENYHCYGTCKNILGSFECSCPAG 227
>08_02_0421 - 16932354-16932427,16932909-16933076,16933443-16934544
Length = 447
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/74 (27%), Positives = 28/74 (37%), Gaps = 2/74 (2%)
Frame = +3
Query: 360 CKNG-GTCASSPRGE-YYCNCTTRYAGEFCQHLNPCHSESSSRCQNXXXXXXXXXXXXXX 533
C++ C S G Y CNCT Y G + C + C++
Sbjct: 332 CRSAHSVCIDSSNGPGYICNCTAGYHGN-PYVVGDC--TDINECEHKDEYPCYGVCTNTA 388
Query: 534 XSFACDCPLGFSAS 575
S+AC CP G S +
Sbjct: 389 GSYACSCPKGSSGN 402
>09_04_0472 -
17895285-17896459,17897113-17897271,17897374-17897794,
17898520-17898552,17898902-17899384
Length = 756
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 6/48 (12%)
Frame = +3
Query: 360 CKNGGT-CASSPRGEYYCNCTTRYAG-----EFCQHLNPCHSESSSRC 485
C +G + C P+G Y C C+ Y G + C+ +N C ++ C
Sbjct: 278 CISGKSRCVDDPKGGYRCKCSDGYEGNPYVKDGCKDINECLDNATYPC 325
>04_01_0609 +
7966263-7966366,7967945-7968706,7972607-7972851,
7976940-7977107,7977471-7977734,7977962-7978509
Length = 696
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/68 (26%), Positives = 25/68 (36%), Gaps = 2/68 (2%)
Frame = +3
Query: 366 NGGTCASSPRG--EYYCNCTTRYAGEFCQHLNPCHSESSSRCQNXXXXXXXXXXXXXXXS 539
N CA+ G Y+CNC+ Y G P + + C+N S
Sbjct: 337 NHSKCANVTSGLDGYFCNCSEGYIG---NPYIPDGCKDVNECENNSICGAGSTCKNTEGS 393
Query: 540 FACDCPLG 563
+ CDC G
Sbjct: 394 YRCDCNFG 401
>11_08_0004 +
27518384-27519018,27519147-27519397,27520437-27520559,
27523499-27524529
Length = 679
Score = 29.1 bits (62), Expect = 4.0
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 6/79 (7%)
Frame = +3
Query: 243 SRNFVPDYGIQLLSFVFLVTSAASRIEGVEGFVSCSPSPCKNGGTCASSPRGE-YYCNCT 419
S++FV G + +S V A R G + +P+ C ++ G+ Y CNC+
Sbjct: 225 SKSFVNSTGERRVSTVL---DWAIRRNGSCSSATGAPACVSAHSYCVNATNGDGYLCNCS 281
Query: 420 TRYAGE-----FCQHLNPC 461
T YAG C ++N C
Sbjct: 282 TGYAGNPYVTGGCININEC 300
>09_04_0477 - 17932797-17933974,17934454-17934612,17934693-17934957
Length = 533
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 5/41 (12%)
Frame = +3
Query: 378 CASSPRGEYYCNCTTRYAG-----EFCQHLNPCHSESSSRC 485
C P G Y CNC+ Y G + C+ +N C + C
Sbjct: 61 CNDDPSGGYRCNCSHGYEGNPYIKDGCEDINECLDNVTYPC 101
>03_05_1019 +
29736644-29736709,29737156-29737515,29737595-29737735,
29737912-29738044,29738344-29738457,29738553-29738701,
29740815-29740907,29741019-29741079,29741180-29741512,
29742149-29742224,29742322-29742421,29743300-29743369,
29743987-29744082,29744355-29744402,29744427-29744658,
29745186-29745246,29745265-29745375
Length = 747
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +3
Query: 612 APCLNGATCRLTSIETYECDCPPGYTGVECSHEDHCASXPCRNGGRC 752
A C C+ I C+C G+TG++CS C +GG C
Sbjct: 570 AKCTGHGICKANGI----CECESGWTGIDCS-TAVCDEQCSLHGGVC 611
>10_08_0798 + 20649370-20649428,20649515-20649719
Length = 87
Score = 28.7 bits (61), Expect = 5.3
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = +3
Query: 609 SAPCLNGATCRLTSIETYECDCPPGYTGVECSHEDHCASXPCRNG 743
+ PC G CR S G CS DHC PCR G
Sbjct: 10 AVPCPGGTGCRCASSAR-----SGGGDHTTCSCGDHCGCNPCRCG 49
>10_08_0026 -
14253680-14253894,14253981-14254109,14254704-14254769,
14254887-14255133
Length = 218
Score = 28.7 bits (61), Expect = 5.3
Identities = 11/39 (28%), Positives = 16/39 (41%)
Frame = +3
Query: 345 CSPSPCKNGGTCASSPRGEYYCNCTTRYAGEFCQHLNPC 461
C C +GG C Y+C C+ + F + PC
Sbjct: 106 CVAINCGSGGECVKEEGLSYHCACSPGFVNMFNLTMFPC 144
>10_01_0054 - 773395-774518,776957-777124,777455-778376
Length = 737
Score = 28.7 bits (61), Expect = 5.3
Identities = 11/21 (52%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
Frame = +3
Query: 375 TCASSPRG-EYYCNCTTRYAG 434
TC +S G YYCNC++ Y G
Sbjct: 275 TCVNSTNGLGYYCNCSSGYEG 295
>05_01_0126 + 858259-858489,858641-859189,859545-860162
Length = 465
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +3
Query: 351 PSPCKNGGTCASSPRGEYYCNCTTRYAGEFCQHLNPC 461
P PC +G C ++ R E+ C R C +NPC
Sbjct: 305 PPPCCSG--CGTTHRVEWVMTCCHRLLCVGCAEVNPC 339
>04_03_0603 - 17898310-17899457,17899658-17899747,17900853-17901738
Length = 707
Score = 28.7 bits (61), Expect = 5.3
Identities = 18/70 (25%), Positives = 26/70 (37%), Gaps = 1/70 (1%)
Frame = +3
Query: 381 ASSPRGEYYCNCTTRYAGE-FCQHLNPCHSESSSRCQNXXXXXXXXXXXXXXXSFACDCP 557
+S + Y CNC+ Y G + Q N C E + C++ F C C
Sbjct: 267 SSGAKSAYMCNCSKGYHGNPYLQGSNGC--EDINECEHPESYPCYGECHNKDGGFDCFCR 324
Query: 558 LGFSASLCEI 587
G A + I
Sbjct: 325 DGVVACILSI 334
>02_04_0206 +
20916063-20919669,20919816-20920014,20920935-20921074,
20921184-20921263,20922759-20922875,20923089-20923136,
20923509-20923601,20923881-20923958,20924114-20924218,
20924543-20925212,20925253-20925350,20925887-20925963,
20926035-20926117,20926208-20926287,20927060-20927139,
20927698-20927743,20928709-20929181,20929234-20929579
Length = 2139
Score = 28.7 bits (61), Expect = 5.3
Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 4/72 (5%)
Frame = +3
Query: 540 FACDCPLGFSASLCEIR---VPAACDSAPCLNGATCRLTSIETYE-CDCPPGYTGVECSH 707
F D P G +AS+CE+ +CD PC S E + + PP SH
Sbjct: 609 FWMDVPKGSTASVCEVENTGTRRSCD--PCAEIEFPLQQSREKHVISESPPERDLTSSSH 666
Query: 708 EDHCASXPCRNG 743
C + PC +G
Sbjct: 667 NLPCENEPCYSG 678
>01_03_0307 + 14879564-14879594,14880024-14880182,14880629-14881857
Length = 472
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +3
Query: 348 SPSPCKNGGTCASSPRGEYYCNCTTRYAG-EFCQHLNPCHSE 470
+PSPC G TC ++ G YYC+ + G + + N C+ +
Sbjct: 18 NPSPCTKGETCRNT-IGWYYCSRPSCPLGRKLARETNTCNPD 58
>03_06_0369 +
33425251-33425778,33425864-33426051,33426152-33426251,
33426366-33426578,33426616-33426822,33426908-33427095,
33427234-33427492
Length = 560
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +1
Query: 454 TLVIASRARDARMAVLVASDPESAAAPRLSPVIVPWGSAL 573
+L++ AR AR A+ + +AAA R+ P +PW A+
Sbjct: 5 SLLLLPAARPARPALHLRDAAAAAAAARVPPPRLPWSRAV 44
>02_05_0005 - 24890239-24891419,24891524-24891694,24891810-24892704
Length = 748
Score = 28.3 bits (60), Expect = 7.0
Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Frame = +3
Query: 318 IEGVEGFVSCSPS----PCKNGGTCASSPRGEYYCNCTTRYAGEFCQHLNPCHSESS 476
++G + C S PC GTC ++P G + C+C + G + C ++ S
Sbjct: 294 LDGCQDINECEDSRFKYPCSVPGTCINTP-GGFRCSCPDKTTGN--AYFGTCEAKKS 347
>10_01_0083 - 1046086-1047086,1047976-1048161,1048266-1049247
Length = 722
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = +3
Query: 579 CEIRV--PAACDSAPCLNGATCRLTSIETYECDCPPGYTG 692
C++R+ P D PC + C+ Y+C C PG G
Sbjct: 332 CQLRIQFPELRDVYPCSSDGICK-NRPGGYDCPCKPGMKG 370
>10_01_0056 + 795258-796211
Length = 317
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 6/34 (17%)
Frame = +3
Query: 378 CASSPRGE-YYCNCTTRYAG-----EFCQHLNPC 461
C +S G YYCNC+ Y G + CQ N C
Sbjct: 281 CVNSTNGPGYYCNCSNGYEGNPYDNDGCQGKNVC 314
>07_01_0479 + 3606663-3607448
Length = 261
Score = 27.9 bits (59), Expect = 9.2
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -2
Query: 562 PKGQSQAKDGGPPPTPGLTRQVPP 491
P G A GGPPP PG + PP
Sbjct: 190 PPGVPPAFPGGPPPPPGPFMRGPP 213
>02_05_1157 -
34533625-34533875,34535279-34536340,34536673-34536837,
34536993-34537941
Length = 808
Score = 27.9 bits (59), Expect = 9.2
Identities = 18/65 (27%), Positives = 25/65 (38%), Gaps = 1/65 (1%)
Frame = +3
Query: 378 CASSPRGE-YYCNCTTRYAGEFCQHLNPCHSESSSRCQNXXXXXXXXXXXXXXXSFACDC 554
C S G Y C C+ Y G +L+ ++ CQ+ + CDC
Sbjct: 288 CVDSTNGVGYRCKCSNGYDGN--PYLDGGCTDIDE-CQHLDKYPCHGVCTNLLGGYKCDC 344
Query: 555 PLGFS 569
P GFS
Sbjct: 345 PHGFS 349
>01_06_1740 - 39575614-39576981
Length = 455
Score = 27.9 bits (59), Expect = 9.2
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +1
Query: 628 EPRVGSPLLRPTSVIALLDTQVSNARTKTI 717
EPR+G P L+P + LDT S RT TI
Sbjct: 142 EPRLGPPGLKPAKI---LDTHKSIERTSTI 168
>01_05_0063 + 17764004-17764480
Length = 158
Score = 27.9 bits (59), Expect = 9.2
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -2
Query: 607 SHAAGTLISHNEALNPKGQSQAKDGGPPPTP 515
S AA +++ E L P+ + K PPPTP
Sbjct: 18 STAAEMIVTEQEHLQPRHRRSRKRDRPPPTP 48
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,204,459
Number of Sequences: 37544
Number of extensions: 439863
Number of successful extensions: 1494
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1402
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1493
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2016060588
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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