Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_B01
(755 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g30900.1 68414.m03780 vacuolar sorting receptor, putative sim... 31 0.62
At1g21250.1 68414.m02656 wall-associated kinase 1 (WAK1) identic... 31 0.83
At4g33240.1 68417.m04731 phosphatidylinositol-4-phosphate 5-kina... 30 1.9
At4g13235.1 68417.m02058 hypothetical protein late embryogenesis... 29 2.5
At1g73840.1 68414.m08549 hydroxyproline-rich glycoprotein family... 29 3.3
At2g19385.1 68415.m02261 expressed protein weak similarity to Ce... 29 4.4
At5g42620.1 68418.m05188 expressed protein 28 5.8
At4g30110.1 68417.m04281 ATPase E1-E2 type family protein / halo... 28 5.8
At1g21270.1 68414.m02658 wall-associated kinase 2 (WAK2) identic... 28 5.8
At1g11410.1 68414.m01311 S-locus protein kinase, putative simila... 28 5.8
At5g59790.1 68418.m07495 expressed protein 28 7.7
At2g43610.1 68415.m05421 glycoside hydrolase family 19 protein s... 28 7.7
>At1g30900.1 68414.m03780 vacuolar sorting receptor, putative
similar to BP-80 vacuolar sorting receptor [Pisum
sativum] GI:1737222
Length = 631
Score = 31.5 bits (68), Expect = 0.62
Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 16/74 (21%)
Frame = +3
Query: 546 CDCPL-------GFSASLCEIRVPAAC--DSAPCLNGATCRLT-----SIETYECDCPPG 683
C+CP+ G + CE PA C + C + LT ++ET C CPPG
Sbjct: 444 CECPVVNGVQYKGDGYTSCEPYGPARCSINQGGCWSETKKGLTFSACSNLETSGCRCPPG 503
Query: 684 Y--TGVECSHEDHC 719
+ G++C D C
Sbjct: 504 FKGDGLKCEDIDEC 517
>At1g21250.1 68414.m02656 wall-associated kinase 1 (WAK1) identical
to wall-associated kinase 1 [Arabidopsis thaliana]
GI:3549626; expressed in leaves and stems & induced by
pathogen infection (PMID:10380805)
Length = 735
Score = 31.1 bits (67), Expect = 0.83
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 6/54 (11%)
Frame = +3
Query: 348 SPSPCKNGGTCA-SSPRGEYYCNCTTRYAGE-----FCQHLNPCHSESSSRCQN 491
S S C TC S+PR Y C C + G CQ +N C + S+ N
Sbjct: 243 STSICGGNSTCLDSTPRNGYICRCNEGFDGNPYLSAGCQDVNECTTSSTIHRHN 296
>At4g33240.1 68417.m04731 phosphatidylinositol-4-phosphate 5-kinase
family protein similar to SP|Q9Z1T6 FYVE
finger-containing phosphoinositide kinase (EC 2.7.1.68)
(1- phosphatidylinositol-4-phosphate kinase) (PIP5K)
(PtdIns(4)P-5-kinase) {Mus musculus}; contains Pfam
profiles PF01504: Phosphatidylinositol-4-phosphate
5-Kinase, PF01363: FYVE zinc finger, PF00118:
TCP-1/cpn60 chaperonin family
Length = 1756
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = +3
Query: 210 IHV*MLCYKMWSRNFV-PDYGIQLLSFVFLVTSAASRIEGVEGFVSCSPSPCKNGGTCAS 386
I V CYK W + V PD G ++S F + +A + + + S C T
Sbjct: 91 IRVCNYCYKQWEQGIVPPDNGASIISLHFSSSPSARSVAS----TTSNSSNCTIDSTAGP 146
Query: 387 SPR 395
SPR
Sbjct: 147 SPR 149
>At4g13235.1 68417.m02058 hypothetical protein late embryogenesis
abundant protein -Picea glauca,PID:g1161171
Length = 129
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +3
Query: 372 GTCASSPRGEYYCNCTTRYAGEFCQHLNP 458
G CA PR YC + G FC+ L+P
Sbjct: 51 GECAKLPRCNKYCVSNGFHLGGFCEKLSP 79
>At1g73840.1 68414.m08549 hydroxyproline-rich glycoprotein family
protein similar to proline-rich protein precursor
GB:AAC34889 [Glycine max]
Length = 388
Score = 29.1 bits (62), Expect = 3.3
Identities = 19/52 (36%), Positives = 28/52 (53%)
Frame = -2
Query: 628 PLRQGAESHAAGTLISHNEALNPKGQSQAKDGGPPPTPGLTRQVPPFWHLEL 473
P RQG + A T +SH ++ SQ ++ PP + T Q PPF HL++
Sbjct: 154 PQRQG-HLNPAVTSMSHPQS------SQVQNAPPPASHHPTSQQPPFHHLDI 198
>At2g19385.1 68415.m02261 expressed protein weak similarity to Cell
growth regulating nucleolar protein (Swiss-Prot:Q08288)
[Mus musculus]
Length = 275
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -2
Query: 586 ISHNEALNPKGQSQAKDGGPPPTPGLTRQVPPF 488
I+ E PKGQS++ +G P +++Q P F
Sbjct: 51 ITEAEKYGPKGQSKSANGTPAKPKDISKQEPDF 83
>At5g42620.1 68418.m05188 expressed protein
Length = 841
Score = 28.3 bits (60), Expect = 5.8
Identities = 20/69 (28%), Positives = 28/69 (40%)
Frame = +3
Query: 546 CDCPLGFSASLCEIRVPAACDSAPCLNGATCRLTSIETYECDCPPGYTGVECSHEDHCAS 725
C C LG+ C R +C + C C + C C G+TG++CS C
Sbjct: 618 CRCLLGYHGHDCRNR---SCPNN-CNGHGKCTTQGV----CICENGFTGIDCS-TAICDE 668
Query: 726 XPCRNGGRC 752
+GG C
Sbjct: 669 QCSLHGGVC 677
>At4g30110.1 68417.m04281 ATPase E1-E2 type family protein /
haloacid dehalogenase-like hydrolase family protein /
heavy-metal-associated domain-containing protein similar
to cadmium efflux pump protein from Geobacillus
stearothermophilus [GI:16753175], cadmium resistance
protein B from Staphylococcus aureus [GI:14020985]
Length = 951
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +3
Query: 348 SPSPCKNGGTCASSPRGEYYCNCTTRYAGEFCQH 449
S S CK+ C+S R + NC YA E C H
Sbjct: 901 SDSHCKSN--CSSRERCHHGSNCCRSYAKESCSH 932
>At1g21270.1 68414.m02658 wall-associated kinase 2 (WAK2) identical
to wall-associated kinase 2 [Arabidopsis thaliana]
GI:4826399; induced by salicylic acid or INA
(PMID:10380805)
Length = 732
Score = 28.3 bits (60), Expect = 5.8
Identities = 22/75 (29%), Positives = 26/75 (34%), Gaps = 6/75 (8%)
Frame = +3
Query: 360 CKNGGTCASSPRGE-YYCNCTTRYAGE-----FCQHLNPCHSESSSRCQNXXXXXXXXXX 521
C TC S G Y C C + G CQ +N C S S C
Sbjct: 243 CGGNSTCFDSTGGTGYNCKCLEGFEGNPYLPNGCQDINECIS-SRHNCSEHSTCENTKG- 300
Query: 522 XXXXXSFACDCPLGF 566
SF C+CP G+
Sbjct: 301 -----SFNCNCPSGY 310
>At1g11410.1 68414.m01311 S-locus protein kinase, putative similar
to receptor-like protein kinase [Arabidopsis thaliana]
gi|4008008|gb|AAC95352; contains S-locus glycoprotein
family domain, Pfam:PF00954
Length = 840
Score = 28.3 bits (60), Expect = 5.8
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +3
Query: 636 CRLTSIETYECDCPPGY 686
C TS E +EC C PGY
Sbjct: 299 CDSTSTEKFECSCLPGY 315
>At5g59790.1 68418.m07495 expressed protein
Length = 423
Score = 27.9 bits (59), Expect = 7.7
Identities = 8/28 (28%), Positives = 17/28 (60%)
Frame = -1
Query: 275 LNPIIRYKVPRPHFVAQHSHMDHTHLFQ 192
L P++ KVP +++ ++ +DH H +
Sbjct: 39 LKPVVNRKVPVVYYLCRNGQLDHPHFIE 66
>At2g43610.1 68415.m05421 glycoside hydrolase family 19 protein
similar to chitinase GI:17799 from [Brassica napus];
contains Pfam profiles PF00182: Chitinase class I,
PF00187: Chitin recognition protein
Length = 281
Score = 27.9 bits (59), Expect = 7.7
Identities = 21/65 (32%), Positives = 29/65 (44%)
Frame = +3
Query: 276 LLSFVFLVTSAASRIEGVEGFVSCSPSPCKNGGTCASSPRGEYYCNCTTRYAGEFCQHLN 455
L+ F+F +T + G +C + CK G C S YC T Y G CQ
Sbjct: 12 LIIFLFTLTI----MTGTAFSQNCGTNGCK-GNMCCSRWG---YCGTTKAYCGTGCQS-G 62
Query: 456 PCHSE 470
PC+S+
Sbjct: 63 PCNSK 67
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,470,047
Number of Sequences: 28952
Number of extensions: 322727
Number of successful extensions: 850
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 809
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 850
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1682736544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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