Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_A23
(845 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9W555 Cluster: CG14813-PA; n=5; Diptera|Rep: CG14813-P... 291 1e-77
UniRef50_UPI0000D5598F Cluster: PREDICTED: similar to CG14813-PA... 287 2e-76
UniRef50_Q7ZU89 Cluster: Archain 1 like; n=2; Bilateria|Rep: Arc... 281 2e-74
UniRef50_P48444 Cluster: Coatomer subunit delta; n=40; Eumetazoa... 279 5e-74
UniRef50_A7T498 Cluster: Predicted protein; n=1; Nematostella ve... 247 2e-64
UniRef50_Q4PBN7 Cluster: Putative uncharacterized protein; n=2; ... 204 2e-51
UniRef50_Q55EZ6 Cluster: Putative uncharacterized protein; n=1; ... 200 3e-50
UniRef50_Q93Y22 Cluster: Coatomer subunit delta; n=24; Eukaryota... 198 2e-49
UniRef50_Q6C3S2 Cluster: Yarrowia lipolytica chromosome E of str... 190 5e-47
UniRef50_UPI00006A1DC9 Cluster: UPI00006A1DC9 related cluster; n... 177 3e-43
UniRef50_Q6BLD4 Cluster: Similar to ca|CA4136|CaRET2 Candida alb... 174 3e-42
UniRef50_O74496 Cluster: Coatomer delta subunit Ret2; n=17; Asco... 172 8e-42
UniRef50_A3LVB0 Cluster: Predicted protein; n=2; Pichia|Rep: Pre... 171 2e-41
UniRef50_A4RV57 Cluster: Predicted protein; n=2; Ostreococcus|Re... 164 2e-39
UniRef50_UPI00006CAFB5 Cluster: hypothetical protein TTHERM_0046... 155 1e-36
UniRef50_Q4QEP9 Cluster: Coatomer delta subunit-like protein; n=... 144 2e-33
UniRef50_A0D0F3 Cluster: Chromosome undetermined scaffold_33, wh... 144 3e-33
UniRef50_P43621 Cluster: Coatomer subunit delta; n=7; Saccharomy... 142 1e-32
UniRef50_A5K507 Cluster: Coatomer delta subunit, putative; n=4; ... 139 9e-32
UniRef50_Q5CJF6 Cluster: Delta-COP; n=2; Cryptosporidium|Rep: De... 137 3e-31
UniRef50_Q8MV47 Cluster: Coatomer delta subunit; n=3; Plasmodium... 137 4e-31
UniRef50_A2DK67 Cluster: Putative uncharacterized protein; n=1; ... 128 2e-28
UniRef50_Q4U9X7 Cluster: Coatomer delta subunit, putative; n=3; ... 99 1e-19
UniRef50_A2EXI9 Cluster: Putative uncharacterized protein; n=1; ... 94 3e-18
UniRef50_A7AT94 Cluster: Putative uncharacterized protein; n=1; ... 83 6e-15
UniRef50_Q1EQ33 Cluster: Delta2-COP; n=1; Entamoeba histolytica|... 71 3e-11
UniRef50_Q1EQ34 Cluster: Delta1-COP; n=2; Entamoeba histolytica|... 62 1e-08
UniRef50_Q01BY4 Cluster: Chromosome 03 contig 1, DNA sequence; n... 48 2e-04
UniRef50_A4S949 Cluster: Predicted protein; n=2; Ostreococcus|Re... 42 0.026
UniRef50_A5K4K8 Cluster: Adapter-related protein complex 4 mu 1 ... 40 0.079
UniRef50_A5E396 Cluster: AP-1 complex subunit mu-1; n=6; Sacchar... 39 0.18
UniRef50_A0A1F7 Cluster: Clathrin-associated adaptor complex AP-... 38 0.24
UniRef50_Q7RCE5 Cluster: Clathrin coat assembly like protein; n=... 37 0.55
UniRef50_Q3IRX8 Cluster: Probable nitrate reductase/ sulfite deh... 35 2.2
UniRef50_UPI00006CF807 Cluster: hypothetical protein TTHERM_0054... 35 3.0
UniRef50_Q4SPT3 Cluster: Chromosome 7 SCAF14536, whole genome sh... 35 3.0
UniRef50_Q0MX07 Cluster: Putative uncharacterized protein; n=1; ... 34 3.9
UniRef50_O00189 Cluster: AP-4 complex subunit mu-1; n=34; Euther... 34 3.9
UniRef50_O23685 Cluster: Clathrin assembly protein AP19 homolog;... 34 5.2
UniRef50_Q4UEZ8 Cluster: Clathrin-coat assembly protein, putativ... 34 5.2
UniRef50_O16867 Cluster: Basic helix-loop-helix neural transcrip... 34 5.2
UniRef50_Q9BXS5 Cluster: AP-1 complex subunit mu-1; n=137; Eukar... 34 5.2
UniRef50_Q677N1 Cluster: Putative uncharacterized protein; n=1; ... 33 6.8
UniRef50_A6PQ87 Cluster: Putative uncharacterized protein; n=1; ... 33 6.8
UniRef50_Q550G8 Cluster: Clathrin-adaptor medium chain apm 4; n=... 33 6.8
UniRef50_Q1JSZ4 Cluster: Clathrin coat assembly protein, putativ... 33 6.8
UniRef50_A7TF49 Cluster: Putative uncharacterized protein; n=1; ... 33 6.8
UniRef50_Q9Y7L6 Cluster: AP-2 complex subunit sigma; n=18; Eukar... 33 6.8
UniRef50_Q09718 Cluster: AP-2 complex subunit mu; n=1; Schizosac... 33 6.8
UniRef50_A1BFC9 Cluster: Carbamoyl-phosphate synthase L chain, A... 33 9.0
>UniRef50_Q9W555 Cluster: CG14813-PA; n=5; Diptera|Rep: CG14813-PA -
Drosophila melanogaster (Fruit fly)
Length = 532
Score = 291 bits (715), Expect = 1e-77
Identities = 151/260 (58%), Positives = 181/260 (69%), Gaps = 12/260 (4%)
Frame = +3
Query: 96 MVLIAATVCTKSGKALVSRQFVEMTKARIEGLLAAFPKLMTGGRQHTFVETESVRYVYQP 275
MVLIAA VCTK+GK ++SRQFVEMTKARIEGLLAAFPKLMT G+QHT+VET+SVRYVYQP
Sbjct: 1 MVLIAAAVCTKNGKVILSRQFVEMTKARIEGLLAAFPKLMTAGKQHTYVETDSVRYVYQP 60
Query: 276 LDKLYMLLITTKASNILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIVALG 455
++KLYMLLITTKASNILEDLETLRLFS+V+PEY L E E++ AFNL+FAFDEIVALG
Sbjct: 61 MEKLYMLLITTKASNILEDLETLRLFSKVIPEYSHSLDEKEIVENAFNLIFAFDEIVALG 120
Query: 456 YRESVNLAQVRSFVEMDSHEEKIYQAVRQTQXXXXXXXXXXXXXXLQRERLEAAKRGQP- 632
YRESVNLAQ+++FVEMDSHEEK+YQAVRQTQ LQR+R+EA+KRG P
Sbjct: 121 YRESVNLAQIKTFVEMDSHEEKVYQAVRQTQERDARQKMREKAKELQRQRMEASKRGGPS 180
Query: 633 -----PRXXXXXXXXXXXXXXXXXXXXXXIAEKIPT------TPARDTRTVGRSAMKLGS 779
R I + + A ++ R+A+KLG
Sbjct: 181 LGGIGSRSGGFSADGIGSSGVSSSSGASSANTGITSIDVDTKSKAAASKPASRNALKLGG 240
Query: 780 RGTDADSFVSRLRXEGDVTA 839
+ D DSFV +L+ EG+ A
Sbjct: 241 KSKDVDSFVDQLKNEGEKIA 260
>UniRef50_UPI0000D5598F Cluster: PREDICTED: similar to CG14813-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG14813-PA - Tribolium castaneum
Length = 529
Score = 287 bits (705), Expect = 2e-76
Identities = 149/257 (57%), Positives = 179/257 (69%), Gaps = 4/257 (1%)
Frame = +3
Query: 87 KNKMVLIAATVCTKSGKALVSRQFVEMTKARIEGLLAAFPKLMTGGRQHTFVETESVRYV 266
K+ VLIAA VCTK+GK +VSRQFVEMTKARIEGLLAAFPKL+ G QHTFVET+SVRYV
Sbjct: 14 KSNKVLIAAAVCTKAGKTIVSRQFVEMTKARIEGLLAAFPKLIPTGTQHTFVETDSVRYV 73
Query: 267 YQPLDKLYMLLITTKASNILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIV 446
YQPL++LYMLLITT+ASNILEDLETLRLF++V+PEYC L E E+ AF+L+FAFDEIV
Sbjct: 74 YQPLERLYMLLITTRASNILEDLETLRLFAKVIPEYCRSLEENEIAENAFSLIFAFDEIV 133
Query: 447 ALGYRESVNLAQVRSFVEMDSHEEKIYQAVRQTQXXXXXXXXXXXXXXLQRERLEAAKRG 626
ALGYRESVNL+Q+R+FVEMDSHEE++YQAVRQTQ LQR+R+EA K+G
Sbjct: 134 ALGYRESVNLSQIRTFVEMDSHEERVYQAVRQTQEREAKNKMREKAKELQRQRMEANKKG 193
Query: 627 QPPR--XXXXXXXXXXXXXXXXXXXXXXIAEKI-PTTPARDTRTVGRSAMKLGSRGTDAD 797
P I+ I P + + MKLG +G D +
Sbjct: 194 VKPSFGSSGGFGSSSGYTPAPSVGDVANISNDIKPPAYSSAPQKPSTRGMKLGGKGHDVE 253
Query: 798 SFVSRLRXEGD-VTAPV 845
SFV +L+ EG+ V APV
Sbjct: 254 SFVDQLKSEGENVIAPV 270
>UniRef50_Q7ZU89 Cluster: Archain 1 like; n=2; Bilateria|Rep:
Archain 1 like - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 512
Score = 281 bits (689), Expect = 2e-74
Identities = 139/246 (56%), Positives = 171/246 (69%), Gaps = 1/246 (0%)
Frame = +3
Query: 96 MVLIAATVCTKSGKALVSRQFVEMTKARIEGLLAAFPKLMTGGRQHTFVETESVRYVYQP 275
MVL+AA VCTK+GKA+VSRQFVEMT+ R+EGLLAAFPKLM G+QHTFVET+SVRYVYQP
Sbjct: 1 MVLLAAAVCTKAGKAIVSRQFVEMTRTRVEGLLAAFPKLMNTGKQHTFVETDSVRYVYQP 60
Query: 276 LDKLYMLLITTKASNILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIVALG 455
L+KLYM+LITTK SNILEDLETLRLFSRV+PEYC L E+E+ F+L+FAFDEIVALG
Sbjct: 61 LEKLYMVLITTKNSNILEDLETLRLFSRVIPEYCRVLEESEISEHCFDLIFAFDEIVALG 120
Query: 456 YRESVNLAQVRSFVEMDSHEEKIYQAVRQTQXXXXXXXXXXXXXXLQRERLEAAKRGQPP 635
YRE+VNLAQ+R+F EMDSHEEK+++AVR+TQ LQR R +A + G+
Sbjct: 121 YRENVNLAQIRTFTEMDSHEEKVFRAVRETQEREAKAEMKRKAKELQRARQDAERAGKKS 180
Query: 636 RXXXXXXXXXXXXXXXXXXXXXXIAEKIPTTPARDTRTVGRS-AMKLGSRGTDADSFVSR 812
I + P R G S A+KLG++G + D FV +
Sbjct: 181 PGFGGFGSSGMSSITSATIITDTIEPEKPKVAPASVRPSGSSKALKLGAKGKEVDFFVDK 240
Query: 813 LRXEGD 830
L+ EG+
Sbjct: 241 LKSEGE 246
>UniRef50_P48444 Cluster: Coatomer subunit delta; n=40;
Eumetazoa|Rep: Coatomer subunit delta - Homo sapiens
(Human)
Length = 511
Score = 279 bits (685), Expect = 5e-74
Identities = 140/249 (56%), Positives = 174/249 (69%), Gaps = 4/249 (1%)
Frame = +3
Query: 96 MVLIAATVCTKSGKALVSRQFVEMTKARIEGLLAAFPKLMTGGRQHTFVETESVRYVYQP 275
MVL+AA VCTK+GKA+VSRQFVEMT+ RIEGLLAAFPKLM G+QHTFVETESVRYVYQP
Sbjct: 1 MVLLAAAVCTKAGKAIVSRQFVEMTRTRIEGLLAAFPKLMNTGKQHTFVETESVRYVYQP 60
Query: 276 LDKLYMLLITTKASNILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIVALG 455
++KLYM+LITTK SNILEDLETLRLFSRV+PEYC L E E+ F+L+FAFDEIVALG
Sbjct: 61 MEKLYMVLITTKNSNILEDLETLRLFSRVIPEYCRALEENEISEHCFDLIFAFDEIVALG 120
Query: 456 YRESVNLAQVRSFVEMDSHEEKIYQAVRQTQXXXXXXXXXXXXXXLQRERLEAAKRGQPP 635
YRE+VNLAQ+R+F EMDSHEEK+++AVR+TQ LQ+ R +A ++G+
Sbjct: 121 YRENVNLAQIRTFTEMDSHEEKVFRAVRETQEREAKAEMRRKAKELQQARRDAERQGKKA 180
Query: 636 RXXXXXXXXXXXXXXXXXXXXXXIAE----KIPTTPARDTRTVGRSAMKLGSRGTDADSF 803
I E K+ PAR + A+KLG++G + D+F
Sbjct: 181 PGFGGFGSSAVSGGSTAAMITETIIETDKPKVAPAPARPSGP--SKALKLGAKGKEVDNF 238
Query: 804 VSRLRXEGD 830
V +L+ EG+
Sbjct: 239 VDKLKSEGE 247
>UniRef50_A7T498 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 381
Score = 247 bits (605), Expect = 2e-64
Identities = 117/151 (77%), Positives = 137/151 (90%), Gaps = 3/151 (1%)
Frame = +3
Query: 99 VLIAATVCTKSGKALVSRQFVEMTKARIEGLLAAFPKLMTGG---RQHTFVETESVRYVY 269
VL+AA +CTK+GKA++SRQFVEMT++RIEGLL+AFPKLMT G +QHTFVETESVRYVY
Sbjct: 4 VLLAAAICTKNGKAIISRQFVEMTRSRIEGLLSAFPKLMTSGSSVKQHTFVETESVRYVY 63
Query: 270 QPLDKLYMLLITTKASNILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIVA 449
QPL+KLYMLLITTK SNILEDLETLRLFSRV+PEYC + E+E+ AF L+FAFDEIVA
Sbjct: 64 QPLEKLYMLLITTKHSNILEDLETLRLFSRVIPEYCRAMEESEIGEHAFELIFAFDEIVA 123
Query: 450 LGYRESVNLAQVRSFVEMDSHEEKIYQAVRQ 542
LGYRE+VNLAQ+R+F EMDSHEEK++QAVRQ
Sbjct: 124 LGYRENVNLAQIRTFTEMDSHEEKVFQAVRQ 154
>UniRef50_Q4PBN7 Cluster: Putative uncharacterized protein; n=2;
Basidiomycota|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 554
Score = 204 bits (499), Expect = 2e-51
Identities = 97/178 (54%), Positives = 133/178 (74%)
Frame = +3
Query: 96 MVLIAATVCTKSGKALVSRQFVEMTKARIEGLLAAFPKLMTGGRQHTFVETESVRYVYQP 275
MV++AA+V T+ GK ++SRQF +M ++RIEGLLA+FPKL++ G QHT VET++VR+VYQP
Sbjct: 1 MVILAASVSTRGGKPVISRQFRDMPRSRIEGLLASFPKLISAGSQHTSVETDAVRFVYQP 60
Query: 276 LDKLYMLLITTKASNILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIVALG 455
L+ LYM+LIT K SNIL+D++TL LF+RV + C L E+ VL +F LL AFDEIV+LG
Sbjct: 61 LEDLYMILITNKNSNILQDIDTLHLFARVTSDICRSLDESSVLRYSFELLGAFDEIVSLG 120
Query: 456 YRESVNLAQVRSFVEMDSHEEKIYQAVRQTQXXXXXXXXXXXXXXLQRERLEAAKRGQ 629
YRE+VNL QVRS +EM+SHEEKI + + + + L+ +R +AA+RGQ
Sbjct: 121 YRENVNLTQVRSILEMESHEEKIQEIIERNKEMEAKEELKRRAKQLEMQRRDAARRGQ 178
>UniRef50_Q55EZ6 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 540
Score = 200 bits (489), Expect = 3e-50
Identities = 93/178 (52%), Positives = 129/178 (72%)
Frame = +3
Query: 96 MVLIAATVCTKSGKALVSRQFVEMTKARIEGLLAAFPKLMTGGRQHTFVETESVRYVYQP 275
MV++AA +CTK+GKAL+SRQF EMTK+R+EGLLAAFPKL+ GRQHTF+ETE++RYVYQP
Sbjct: 1 MVVLAAAICTKNGKALLSRQFSEMTKSRVEGLLAAFPKLIGLGRQHTFIETENIRYVYQP 60
Query: 276 LDKLYMLLITTKASNILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIVALG 455
L+ LY++LIT K SNILEDLETL L +++VPEY E ++ AF L+F FDE++A+G
Sbjct: 61 LESLYIVLITNKNSNILEDLETLHLLAKLVPEYS-NFDEYDISKNAFELIFTFDEVIAMG 119
Query: 456 YRESVNLAQVRSFVEMDSHEEKIYQAVRQTQXXXXXXXXXXXXXXLQRERLEAAKRGQ 629
Y+E V L Q++ F+ M+SHEE+ ++ + + ++R R E RG+
Sbjct: 120 YKERVTLQQIKHFISMESHEEERFRMEEKIKQKEAQILASSKAKEIERMRHEEMLRGK 177
>UniRef50_Q93Y22 Cluster: Coatomer subunit delta; n=24;
Eukaryota|Rep: Coatomer subunit delta - Arabidopsis
thaliana (Mouse-ear cress)
Length = 527
Score = 198 bits (482), Expect = 2e-49
Identities = 89/177 (50%), Positives = 131/177 (74%)
Frame = +3
Query: 96 MVLIAATVCTKSGKALVSRQFVEMTKARIEGLLAAFPKLMTGGRQHTFVETESVRYVYQP 275
MV++AA + KSGK +VSR +V+M++ RIEGLLAAFPKL+ G+QHT++ETE+VRYVYQP
Sbjct: 1 MVVLAAAIVVKSGKVIVSRHYVDMSRIRIEGLLAAFPKLVGMGKQHTYIETENVRYVYQP 60
Query: 276 LDKLYMLLITTKASNILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIVALG 455
++ L++LL+TTK SNILEDL TL L S++VPEY + L E + +F L+FAFDE+++LG
Sbjct: 61 IEALFLLLVTTKQSNILEDLATLTLLSKLVPEYSMSLDEEGISRASFELIFAFDEVISLG 120
Query: 456 YRESVNLAQVRSFVEMDSHEEKIYQAVRQTQXXXXXXXXXXXXXXLQRERLEAAKRG 626
++ESV +AQV+ + EM+SHEEK+++ V Q++ + + ++E K G
Sbjct: 121 HKESVTVAQVKQYCEMESHEEKLHKLVMQSKINDTKDVMKRKANEIDKSKIEKNKPG 177
>UniRef50_Q6C3S2 Cluster: Yarrowia lipolytica chromosome E of strain
CLIB 122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome E of
strain CLIB 122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 519
Score = 190 bits (462), Expect = 5e-47
Identities = 88/179 (49%), Positives = 131/179 (73%)
Frame = +3
Query: 96 MVLIAATVCTKSGKALVSRQFVEMTKARIEGLLAAFPKLMTGGRQHTFVETESVRYVYQP 275
MV++AA++C++ GKA++SRQF ++ K ++ GLLA FPKL+ G +QHT VE ++VRYVYQP
Sbjct: 1 MVVLAASICSRGGKAIISRQFRDLPKEKVAGLLAIFPKLIQGSKQHTTVEHDNVRYVYQP 60
Query: 276 LDKLYMLLITTKASNILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIVALG 455
L++LY++LIT + SNIL+D+ETLRL +VV + E E+L AF+LL AFDE+V+ G
Sbjct: 61 LEELYVVLITNRQSNILQDIETLRLLVQVVTSLVRVVDEREILLAAFDLLGAFDEVVSQG 120
Query: 456 YRESVNLAQVRSFVEMDSHEEKIYQAVRQTQXXXXXXXXXXXXXXLQRERLEAAKRGQP 632
YRE+++L Q+++F+EM+SHEEKI + + + + L+ +R EAAKRG P
Sbjct: 121 YRENLSLQQIQTFLEMESHEEKIQEIIERNKELEATEDRKRKAKQLEMQRKEAAKRGLP 179
>UniRef50_UPI00006A1DC9 Cluster: UPI00006A1DC9 related cluster; n=1;
Xenopus tropicalis|Rep: UPI00006A1DC9 UniRef100 entry -
Xenopus tropicalis
Length = 513
Score = 177 bits (431), Expect = 3e-43
Identities = 78/176 (44%), Positives = 130/176 (73%), Gaps = 2/176 (1%)
Frame = +3
Query: 99 VLIAATVCTKSGKALVSRQFVEMTKARIEGLLAAFPKLMTGG-RQHTFVETESVRYVYQP 275
V+++A + T++GK LV+RQFVE+T+ R+EGLLAAFPKL++ G R+HTF++TESVRYVYQP
Sbjct: 1 VVLSAALLTRNGKVLVARQFVEITRIRLEGLLAAFPKLLSSGSREHTFIDTESVRYVYQP 60
Query: 276 LDKLYMLLITTKASNILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIV-AL 452
L+ ++L+IT K SNI+EDL T+++ +++VP+ C L+E + ++ F L+F FDE++ A
Sbjct: 61 LESFFVLIITNKTSNIVEDLHTIQVLAKLVPDICAPLSEASIRDKQFELVFGFDELITAG 120
Query: 453 GYRESVNLAQVRSFVEMDSHEEKIYQAVRQTQXXXXXXXXXXXXXXLQRERLEAAK 620
G+ E++N++Q+R +EM+SHEEK++ + +++ ++ E+ E A+
Sbjct: 121 GHSENINVSQIRVNMEMESHEEKLHNMILESKRAAAKDDMKRHTARIKEEQRERAR 176
>UniRef50_Q6BLD4 Cluster: Similar to ca|CA4136|CaRET2 Candida
albicans CaRET2 Coatomer complex delta chain; n=3;
Saccharomycetales|Rep: Similar to ca|CA4136|CaRET2
Candida albicans CaRET2 Coatomer complex delta chain -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 551
Score = 174 bits (423), Expect = 3e-42
Identities = 84/172 (48%), Positives = 120/172 (69%), Gaps = 1/172 (0%)
Frame = +3
Query: 96 MVLIAATVCTKSGKALVSRQFVEMTKARIEGLLAAFPKLMTG-GRQHTFVETESVRYVYQ 272
MV++AA++CT+ GKAL+SRQF ++TK RI LLA FP L++ G QHT VE E VRYVYQ
Sbjct: 1 MVVLAASICTRGGKALLSRQFRDVTKDRITALLANFPSLISNSGSQHTTVEDEHVRYVYQ 60
Query: 273 PLDKLYMLLITTKASNILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIVAL 452
PL++ Y++LITTK SNIL+D++TL LF+ V + E E+ AF +L AFDEI+ L
Sbjct: 61 PLEEFYIVLITTKHSNILQDIDTLHLFASTVSNMLRVVDEREIFENAFQILSAFDEIINL 120
Query: 453 GYRESVNLAQVRSFVEMDSHEEKIYQAVRQTQXXXXXXXXXXXXXXLQRERL 608
G++E++ L+QV++F+EMDSHEEKI + + + + +QR+ L
Sbjct: 121 GFKENLTLSQVQTFLEMDSHEEKIQEIIERNKELEATEERKRRAKEIQRKEL 172
>UniRef50_O74496 Cluster: Coatomer delta subunit Ret2; n=17;
Ascomycota|Rep: Coatomer delta subunit Ret2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 240
Score = 172 bits (419), Expect = 8e-42
Identities = 79/176 (44%), Positives = 124/176 (70%)
Frame = +3
Query: 96 MVLIAATVCTKSGKALVSRQFVEMTKARIEGLLAAFPKLMTGGRQHTFVETESVRYVYQP 275
MV++A ++ + GKA++SRQF EM++ R+E LL++FP L++ Q+T VE+++VR+VYQP
Sbjct: 1 MVVLAVSIVNRGGKAIISRQFREMSRVRVESLLSSFPALVSEKSQNTTVESDNVRFVYQP 60
Query: 276 LDKLYMLLITTKASNILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIVALG 455
LD+LY++LIT SNIL+D++TL L S+VV C L E E+L AF + AFDE +LG
Sbjct: 61 LDELYIVLITNLQSNILQDIDTLHLLSQVVTSICSSLEEREILEYAFEIFTAFDEATSLG 120
Query: 456 YRESVNLAQVRSFVEMDSHEEKIYQAVRQTQXXXXXXXXXXXXXXLQRERLEAAKR 623
YR++V+L Q+++++EM+SHEEKI + V + + L+ ++ EAA+R
Sbjct: 121 YRDNVSLTQIKTYLEMESHEEKIQEIVSRNKEIEATEERKRRIKQLELQKKEAARR 176
>UniRef50_A3LVB0 Cluster: Predicted protein; n=2; Pichia|Rep:
Predicted protein - Pichia stipitis (Yeast)
Length = 551
Score = 171 bits (415), Expect = 2e-41
Identities = 83/177 (46%), Positives = 123/177 (69%), Gaps = 1/177 (0%)
Frame = +3
Query: 96 MVLIAATVCTKSGKALVSRQFVEMTKARIEGLLAAFPKLMTGGR-QHTFVETESVRYVYQ 272
MV++AA++CT+ GKAL+SRQF E++ RI LLA FP L++ QHT VE +SVRYVYQ
Sbjct: 1 MVVLAASICTRGGKALLSRQFRELSNDRITALLANFPSLISNSSSQHTTVEDDSVRYVYQ 60
Query: 273 PLDKLYMLLITTKASNILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIVAL 452
PL++ Y++LIT K SNIL+D++TL LF+ V + E EV + AF ++ AFDEI++L
Sbjct: 61 PLEEFYIVLITNKTSNILQDIDTLHLFASTVSNLLRNVDEREVFDHAFEIIDAFDEIISL 120
Query: 453 GYRESVNLAQVRSFVEMDSHEEKIYQAVRQTQXXXXXXXXXXXXXXLQRERLEAAKR 623
G++E++ L+Q+++F+EMDSHEEKI + + + + +QR+ E AKR
Sbjct: 121 GFKENLTLSQIQTFLEMDSHEEKIQEIIERNKELEATEERKRKAKEIQRK--ELAKR 175
>UniRef50_A4RV57 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 424
Score = 164 bits (399), Expect = 2e-39
Identities = 77/131 (58%), Positives = 108/131 (82%), Gaps = 3/131 (2%)
Frame = +3
Query: 165 MTKARIEGLLAAFPKLMTGGRQHTFVETESVRYVYQPLD--KLYMLLITTKASNILEDLE 338
MT+ R+EGLLAAFPKL+ G+QHT+VETE+VRYVYQPL+ +Y+LL+TTK SNILEDL+
Sbjct: 1 MTRVRVEGLLAAFPKLVGSGKQHTYVETENVRYVYQPLECGTMYLLLVTTKGSNILEDLD 60
Query: 339 TLRLFSRVVPEYCV-QLTETEVLNQAFNLLFAFDEIVALGYRESVNLAQVRSFVEMDSHE 515
LRL ++ +PEY Q+ E V AF+L+FAFDEI++LGY+E+V +AQV++F EM+SHE
Sbjct: 61 VLRLLAKTLPEYTQGQVDEEGVSFAAFDLIFAFDEIISLGYKENVTMAQVKTFTEMNSHE 120
Query: 516 EKIYQAVRQTQ 548
EK+++ + Q++
Sbjct: 121 EKLHKMMIQSK 131
>UniRef50_UPI00006CAFB5 Cluster: hypothetical protein
TTHERM_00467850; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00467850 - Tetrahymena
thermophila SB210
Length = 543
Score = 155 bits (377), Expect = 1e-36
Identities = 73/171 (42%), Positives = 116/171 (67%), Gaps = 1/171 (0%)
Frame = +3
Query: 96 MVLIAATVCTKSGKALVSRQFVEMTKARIEGLLAAFPKLMTGGRQHTFVETESVRYVYQP 275
MV+I+A VC K G L++RQ+ +TK ++E + FPKL+T +QHTFVETE VRYVY P
Sbjct: 1 MVIISAAVCDKQGDILIARQYQNITKHQLEENMRNFPKLITPDQQHTFVETEYVRYVYLP 60
Query: 276 LDKLYMLLITTKASNILEDLETLRLFSRVVPEYCVQ-LTETEVLNQAFNLLFAFDEIVAL 452
LD +Y++L+T K SNI+ED ET+RL ++V + C ++E VL + F++L FD++++
Sbjct: 61 LDNMYLVLLTKKNSNIIEDQETIRLLHKIVQDLCPSGVSEQNVLKRDFDILLCFDDVISF 120
Query: 453 GYRESVNLAQVRSFVEMDSHEEKIYQAVRQTQXXXXXXXXXXXXXXLQRER 605
G+RESV+L+QV+S +EM+S +EK + + + + +Q++R
Sbjct: 121 GFRESVSLSQVQSALEMESADEKFHIMLMKQKQAEQQEAAKRHQQEMQKKR 171
>UniRef50_Q4QEP9 Cluster: Coatomer delta subunit-like protein; n=7;
Trypanosomatidae|Rep: Coatomer delta subunit-like
protein - Leishmania major
Length = 536
Score = 144 bits (349), Expect = 2e-33
Identities = 67/174 (38%), Positives = 114/174 (65%), Gaps = 3/174 (1%)
Frame = +3
Query: 96 MVLIAATVCTKSGKALVSRQFVEMTKARIEGLLAAFPKLMTGG--RQHTFVETESVRYVY 269
M +I+A V K G+ +++RQF ++++ RIEGLL+AFP+L+ +Q T+++ +VRYVY
Sbjct: 1 MTVISAGVVNKQGRIVLARQFTDISRVRIEGLLSAFPRLLESSMSKQVTYIDAGTVRYVY 60
Query: 270 QPLDKLYMLLITTKASNILEDLETLRLFSRVVPEYCVQ-LTETEVLNQAFNLLFAFDEIV 446
QP+++L+++L+TT SNI+EDL TL L R++PEY + +TE + +F + FA DE+V
Sbjct: 61 QPIEELFLVLVTTTKSNIVEDLATLHLMGRLIPEYVPEGITEASLEAHSFEVFFALDEVV 120
Query: 447 ALGYRESVNLAQVRSFVEMDSHEEKIYQAVRQTQXXXXXXXXXXXXXXLQRERL 608
G RE+ + Q+R ++EMDS+EE++ +Q Q ++ +R+
Sbjct: 121 VCGKRENSTVEQIRVYLEMDSYEERMALEEKQRQIAEAKKITAEHARKMREQRM 174
>UniRef50_A0D0F3 Cluster: Chromosome undetermined scaffold_33, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_33,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 246
Score = 144 bits (348), Expect = 3e-33
Identities = 68/180 (37%), Positives = 112/180 (62%), Gaps = 2/180 (1%)
Frame = +3
Query: 96 MVLIAATVCTKSGKALVSRQFVEMTKARIEGLLAAFPKLMTGGRQHTFVETESVRYVYQP 275
MV+I+A +C K+G + RQF +T + + FPKL++ +QHTF++ E+ RY+Y P
Sbjct: 1 MVIISAAICDKNGILFIGRQFQGITTNELREQVRNFPKLISPTQQHTFIDHENQRYIYTP 60
Query: 276 LDKLYMLLITTKASNILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIVALG 455
+D +Y++LIT+K SNI+EDLE LR+ V+ + C Q++E + +F +L A D+I++ G
Sbjct: 61 IDNIYIVLITSKNSNIIEDLEVLRILKNVLSDICQQISEESIKKNSFEILLAIDDIISAG 120
Query: 456 YRESVNLAQVRSFVEMDSHEEKIYQAVRQTQXXXXXXXXXXXXXXLQRERLE--AAKRGQ 629
RES +QV++ +EM+S EEKI+ + + + ++R+R E A KR Q
Sbjct: 121 LRESTTTSQVQTALEMESSEEKIHLMLTKARENEAKEQAKKHQMEMERKRQEELAQKRNQ 180
>UniRef50_P43621 Cluster: Coatomer subunit delta; n=7;
Saccharomycetales|Rep: Coatomer subunit delta -
Saccharomyces cerevisiae (Baker's yeast)
Length = 546
Score = 142 bits (343), Expect = 1e-32
Identities = 65/153 (42%), Positives = 108/153 (70%), Gaps = 2/153 (1%)
Frame = +3
Query: 96 MVLIAATVCTKSGKALVSRQFVEMTKARIEGLLAAFPKLMTG-GRQHTFVETESVRYVYQ 272
MV++AA++ T+ GK L+SRQF +++K R+ LL+ F L++ HTFVE + VRYVY+
Sbjct: 1 MVVLAASITTRQGKPLLSRQFKDLSKDRVLELLSNFQNLVSEISSDHTFVEDKHVRYVYR 60
Query: 273 PLDKLYMLLITTKASNILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIVAL 452
P D Y++LIT + SNI++DL TL LFS+ + Y + E+ + AF +L +FDEIV++
Sbjct: 61 PFDNYYIILITNRQSNIIKDLATLNLFSQTINSYLSSFQDQEIFHNAFEILSSFDEIVSM 120
Query: 453 -GYRESVNLAQVRSFVEMDSHEEKIYQAVRQTQ 548
GY+E+++ QV++++ M+SHEE+I + + + +
Sbjct: 121 GGYKENLSFTQVQTYLSMESHEERIQEIIERNK 153
>UniRef50_A5K507 Cluster: Coatomer delta subunit, putative; n=4;
Plasmodium|Rep: Coatomer delta subunit, putative -
Plasmodium vivax
Length = 518
Score = 139 bits (336), Expect = 9e-32
Identities = 67/179 (37%), Positives = 110/179 (61%), Gaps = 2/179 (1%)
Frame = +3
Query: 96 MVLIAATVCTKSGKALVSRQFVEMTKARIEGLLAAFPKLMTGGRQ-HTFVETESVRYVYQ 272
M +++A + TKS K LVSRQF ++K ++ L F L+ R HT++ET+ VRYVYQ
Sbjct: 1 MTVLSAAISTKS-KILVSRQFQNISKCDLDSLTIPFHNLIERERSDHTYIETDKVRYVYQ 59
Query: 273 PLDKLYMLLITTKASNILEDLETLRLFSRVVPEYCV-QLTETEVLNQAFNLLFAFDEIVA 449
PLD +Y+ LIT SNI+EDLE +++ S+++ + C + E+ +L + F ++F DE++
Sbjct: 60 PLDSIYIFLITNINSNIIEDLEIIKVLSQIIQDLCQGNINESTILKKCFTIIFYIDELIK 119
Query: 450 LGYRESVNLAQVRSFVEMDSHEEKIYQAVRQTQXXXXXXXXXXXXXXLQRERLEAAKRG 626
G RE VN Q+++++EM+SHEEK+ +R+ + L++ R + K G
Sbjct: 120 NGVREIVNSNQIKTYIEMESHEEKLQTIIRENKEKEEKERRKFIASKLEKNRQKQGKAG 178
>UniRef50_Q5CJF6 Cluster: Delta-COP; n=2; Cryptosporidium|Rep:
Delta-COP - Cryptosporidium hominis
Length = 535
Score = 137 bits (332), Expect = 3e-31
Identities = 67/177 (37%), Positives = 117/177 (66%), Gaps = 6/177 (3%)
Frame = +3
Query: 96 MVLIAATVCTKSGKALVSRQFVEMTKARIEGLLAAFPKLMTG---GRQHTFVETESVRYV 266
MV+ +A++ + K L+SRQFVEMT+ +E L F K + ++T++E +++R++
Sbjct: 1 MVVFSASIVSNR-KILLSRQFVEMTRGDVEAYLNRFIKKIEQFCLSNEYTYMEIDNIRFI 59
Query: 267 YQPLDKLYMLLITTKASNILEDLETLRLFSRVVPEYCVQ---LTETEVLNQAFNLLFAFD 437
YQ +D +Y++L+T SNI+ED++TL+LF +V+ + C +TE + N F+++FAFD
Sbjct: 60 YQAIDNIYLILMTPINSNIIEDMDTLQLFCQVLYDCCNNPPPITEDLIANNCFDVIFAFD 119
Query: 438 EIVALGYRESVNLAQVRSFVEMDSHEEKIYQAVRQTQXXXXXXXXXXXXXXLQRERL 608
EIV+ GYRES+NL+Q+++ +EM+S EEK+++ +RQ + L +ER+
Sbjct: 120 EIVSFGYRESINLSQIKTCLEMESQEEKLHKLIRQNKENEEKERRRHIANRLDKERV 176
>UniRef50_Q8MV47 Cluster: Coatomer delta subunit; n=3;
Plasmodium|Rep: Coatomer delta subunit - Plasmodium
falciparum
Length = 487
Score = 137 bits (331), Expect = 4e-31
Identities = 66/177 (37%), Positives = 110/177 (62%), Gaps = 2/177 (1%)
Frame = +3
Query: 96 MVLIAATVCTKSGKALVSRQFVEMTKARIEGLLAAFPKLMTGGRQ-HTFVETESVRYVYQ 272
M +++A + TKS K LVSRQF ++K ++ L F L+ R HT++ET+ VRYVYQ
Sbjct: 1 MTVLSAVISTKS-KILVSRQFRNISKCDLDSLTIPFHNLIERERSDHTYIETDKVRYVYQ 59
Query: 273 PLDKLYMLLITTKASNILEDLETLRLFSRVVPEYCV-QLTETEVLNQAFNLLFAFDEIVA 449
PLD +Y+ LIT SNI+EDLE +++ S+++ + C + E+ +L + F ++F DE++
Sbjct: 60 PLDNIYIFLITNINSNIIEDLEIIKVLSQIIQDICQGNINESTILKKCFTIIFYIDELIK 119
Query: 450 LGYRESVNLAQVRSFVEMDSHEEKIYQAVRQTQXXXXXXXXXXXXXXLQRERLEAAK 620
G RE VN Q+++++EM+SHEEK+ +R+ + L++ R + +K
Sbjct: 120 NGVREIVNSNQIKTYIEMESHEEKLQTIIRENKEKEEKERRKFIASKLEKNRQKQSK 176
>UniRef50_A2DK67 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 502
Score = 128 bits (309), Expect = 2e-28
Identities = 64/143 (44%), Positives = 98/143 (68%)
Frame = +3
Query: 99 VLIAATVCTKSGKALVSRQFVEMTKARIEGLLAAFPKLMTGGRQHTFVETESVRYVYQPL 278
++++ + ++GK LV+RQF +++KA+I L FPKL+T Q ++VE++++RYVYQ L
Sbjct: 1 MILSVAIINQNGKPLVARQFSKVSKAQILNQLGVFPKLLTKTSQ-SYVESQNIRYVYQNL 59
Query: 279 DKLYMLLITTKASNILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIVALGY 458
DKLY +LITTK SNILEDLE L + + + ET VL+ +L+FA+DE++ GY
Sbjct: 60 DKLYFILITTKDSNILEDLELLSMLIDLTRTIIPTIDETTVLSHNLDLIFAYDEVIFDGY 119
Query: 459 RESVNLAQVRSFVEMDSHEEKIY 527
R++V++ V F+ MDS EE Y
Sbjct: 120 RQTVSVNDVSEFLLMDSKEELQY 142
>UniRef50_Q4U9X7 Cluster: Coatomer delta subunit, putative; n=3;
Theileria|Rep: Coatomer delta subunit, putative -
Theileria annulata
Length = 496
Score = 99.1 bits (236), Expect = 1e-19
Identities = 51/150 (34%), Positives = 87/150 (58%), Gaps = 2/150 (1%)
Frame = +3
Query: 105 IAATVCTKSGKALVSRQFVEMTKARIEGLLAAFPKLMTG-GRQHTFVETESVRYVYQPLD 281
I +T + LVSRQ MT+ IE + F +L+ HTFVE++ R++YQ +D
Sbjct: 3 ILSTGLASEMRILVSRQHTPMTREEIESCFSNFLRLIENKSGDHTFVESDKNRFLYQLVD 62
Query: 282 KLYMLLITTKASNILEDLETLRLFSRVVPEYCVQ-LTETEVLNQAFNLLFAFDEIVALGY 458
Y+ ++TT SNI+EDL L+ +V + E +L F++LF DE+V+
Sbjct: 63 NFYVFVMTTLDSNIIEDLIVLKTLCEIVQNLVKPVINEENILKNIFDILFYMDELVSNNQ 122
Query: 459 RESVNLAQVRSFVEMDSHEEKIYQAVRQTQ 548
E++ Q++ ++EMDS+EEK+++ V +++
Sbjct: 123 GENMTFDQIKVYIEMDSYEEKLHKKVEKSK 152
>UniRef50_A2EXI9 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 489
Score = 94.3 bits (224), Expect = 3e-18
Identities = 45/137 (32%), Positives = 84/137 (61%)
Frame = +3
Query: 117 VCTKSGKALVSRQFVEMTKARIEGLLAAFPKLMTGGRQHTFVETESVRYVYQPLDKLYML 296
+ T++G+ L+ R+F + + IEG L AFP+L+ H +++TE+ R VYQ + LY++
Sbjct: 7 IITQNGRILIVRRFTHSSDSNIEGHLGAFPQLVKNSG-HNYIDTETSRLVYQEVGDLYVI 65
Query: 297 LITTKASNILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIVALGYRESVNL 476
+ +K +NI+E L+ + LF V ++ E +++ A +L+FA+DE V G+ ++ +
Sbjct: 66 ISVSKDTNIIEALDAVTLFVDVTRSVVGEIVEDKIIVNAIDLIFAYDECVFDGFVRNIIV 125
Query: 477 AQVRSFVEMDSHEEKIY 527
+ V F++M+S E Y
Sbjct: 126 SDVSRFLKMESATEAAY 142
>UniRef50_A7AT94 Cluster: Putative uncharacterized protein; n=1;
Babesia bovis|Rep: Putative uncharacterized protein -
Babesia bovis
Length = 498
Score = 83.4 bits (197), Expect = 6e-15
Identities = 48/165 (29%), Positives = 89/165 (53%), Gaps = 14/165 (8%)
Frame = +3
Query: 96 MVLIAATVCTKSGKALVSRQFVEMTKARIEGLLAAFPKLMT-GGRQHTFVETESVRYVYQ 272
M + + +K + L+SRQ E+ +A +E L+ F +++ T+VETE +R+VYQ
Sbjct: 1 MAIYGTGIASKK-RVLLSRQHCELKRADLEMALSCFNRMVEKNDSDFTYVETEGIRFVYQ 59
Query: 273 PLDKLYMLLITTKASNILEDLETLRLFSRVVPEY-CVQLTET------------EVLNQA 413
P+D Y+ ++T+ SNI+ D+ + + +V Y CV + T V Q
Sbjct: 60 PVDDYYVFVMTSIDSNIVRDIGIVHTLAEIVQVYGCVNVLMTLLQSLLQSDIDEGVREQF 119
Query: 414 FNLLFAFDEIVALGYRESVNLAQVRSFVEMDSHEEKIYQAVRQTQ 548
F+++F DE++ E + + Q++ ++ MDS EEK + +R ++
Sbjct: 120 FDIIFYMDELITNKQPEDLTIDQIKEYILMDSQEEKKHNIIRSSK 164
>UniRef50_Q1EQ33 Cluster: Delta2-COP; n=1; Entamoeba
histolytica|Rep: Delta2-COP - Entamoeba histolytica
Length = 504
Score = 71.3 bits (167), Expect = 3e-11
Identities = 40/145 (27%), Positives = 76/145 (52%), Gaps = 1/145 (0%)
Frame = +3
Query: 96 MVLIAATVCTKSGKALVSRQFVEMTKARIEGLLAAFPKLMTGGRQHTFVETESVRYVYQP 275
M + + + ++ G L + Q ++ +LA F +L G Q TF++ E ++Y+YQP
Sbjct: 1 MTIYSIALISRGGNILTAIQNYKLKN--FSSILAQFSRLEKGS-QVTFIQLEKIKYIYQP 57
Query: 276 LDKLYMLLITTKASNILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIVAL- 452
+D +Y++LIT+ SNI+ED + L+ V+ + +TE ++ + F + E
Sbjct: 58 VDDIYVVLITSINSNIVEDTQILQCIVSVLSQRLDGITEAKICSDVFVITDVISEFCNFD 117
Query: 453 GYRESVNLAQVRSFVEMDSHEEKIY 527
G E + + + + M S EE++Y
Sbjct: 118 GTCEKLTSSDIEQNLVMQSQEEELY 142
>UniRef50_Q1EQ34 Cluster: Delta1-COP; n=2; Entamoeba
histolytica|Rep: Delta1-COP - Entamoeba histolytica
Length = 458
Score = 62.5 bits (145), Expect = 1e-08
Identities = 31/97 (31%), Positives = 61/97 (62%), Gaps = 2/97 (2%)
Frame = +3
Query: 243 ETESVRYVYQPLDKLYMLLITTKASNILEDLETLRLFSRVVPEYCVQLTETE--VLNQAF 416
ET+ VR+V++ + +Y++LITT +SN++ED E + + ++ + +LT T + F
Sbjct: 11 ETDGVRFVFRLCEDVYIVLITTLSSNVIEDTE---IMNAIIASFQQKLTITSKGITQGMF 67
Query: 417 NLLFAFDEIVALGYRESVNLAQVRSFVEMDSHEEKIY 527
+LF DE + G+ E ++++ VR+ + M S +E++Y
Sbjct: 68 EVLFILDEFLQWGFVEKISVSNVRTNLAMRSKDEEMY 104
>UniRef50_Q01BY4 Cluster: Chromosome 03 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 03 contig 1, DNA
sequence - Ostreococcus tauri
Length = 266
Score = 48.4 bits (110), Expect = 2e-04
Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Frame = -2
Query: 472 LTLSLYPRATISSKANSKLKAWFKTSVSVSC-TQYSGTTLLKSLNVSRSSRMLLAFVV 302
+T SLYP ISSKA K A ++T S +C YSG+ + S+SS+MLL FVV
Sbjct: 2 VTFSLYPSEMISSKAKIKSNAAYETPSSSTCPCVYSGSVFASNRKTSKSSKMLLPFVV 59
>UniRef50_A4S949 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 481
Score = 41.5 bits (93), Expect = 0.026
Identities = 24/83 (28%), Positives = 39/83 (46%)
Frame = +3
Query: 249 ESVRYVYQPLDKLYMLLITTKASNILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLF 428
+ V Y + LY + TT+ ++ LE L +R+V +YC LTE V A +
Sbjct: 74 DGVNYAHVKASGLYFVATTTRNASGSVILELLHRLARLVKDYCGALTEDAVRKNATLVYE 133
Query: 429 AFDEIVALGYRESVNLAQVRSFV 497
DE + GY ++ + +R V
Sbjct: 134 VIDEAMDYGYAQTTSTEMLRERV 156
>UniRef50_A5K4K8 Cluster: Adapter-related protein complex 4 mu 1
subunit, putative; n=6; Plasmodium|Rep: Adapter-related
protein complex 4 mu 1 subunit, putative - Plasmodium
vivax
Length = 496
Score = 39.9 bits (89), Expect = 0.079
Identities = 31/136 (22%), Positives = 62/136 (45%), Gaps = 2/136 (1%)
Frame = +3
Query: 96 MVLIAATVCTKSGKALVSRQFV-EMTKARIEGLLAAFPKLMTGGRQHTFVETESVRYVYQ 272
MV+ + + G +++R F +++K E + KL GG + + Y
Sbjct: 1 MVVSQFYILSPRGDTIINRDFRGDVSKGSGE-MFFRNVKLHKGGDAPPLFYLNGIHFTYL 59
Query: 273 PLDKLYMLLITTKASNILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAF-DEIVA 449
+ LY + + S+ LE L ++V ++C Q+ E EV+ F L++ DE++
Sbjct: 60 KNNSLYFVFTSLLNSSPSYVLELLYRVVKIVKDFCGQINE-EVIRANFILIYEIVDEVID 118
Query: 450 LGYRESVNLAQVRSFV 497
GY ++ + +R +
Sbjct: 119 YGYIQNSSTESIRHLI 134
>UniRef50_A5E396 Cluster: AP-1 complex subunit mu-1; n=6;
Saccharomycetales|Rep: AP-1 complex subunit mu-1 -
Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 445
Score = 38.7 bits (86), Expect = 0.18
Identities = 26/129 (20%), Positives = 54/129 (41%), Gaps = 4/129 (3%)
Frame = +3
Query: 132 GKALVSRQFV----EMTKARIEGLLAAFPKLMTGGRQHTFVETESVRYVYQPLDKLYMLL 299
GK L+SR + T + LL + G F+ + + Y++ + LY+
Sbjct: 12 GKPLLSRDYKGDIPPNTIEKFPMLLLELENTIDDGEYKPFINDQGINYIFINHNNLYICA 71
Query: 300 ITTKASNILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIVALGYRESVNLA 479
+T K NI+ + L V+ +Y L E + + + DE++ G ++ +
Sbjct: 72 LTRKNENIMTIIIFLSKMIDVMTQYFKSLEEESIRDNFVIIYELLDEMMDFGIVQTTDFK 131
Query: 480 QVRSFVEMD 506
++ ++ D
Sbjct: 132 ILKEYITQD 140
>UniRef50_A0A1F7 Cluster: Clathrin-associated adaptor complex AP-1
small chain sigma 1; n=1; Porphyra yezoensis|Rep:
Clathrin-associated adaptor complex AP-1 small chain
sigma 1 - Porphyra yezoensis
Length = 187
Score = 38.3 bits (85), Expect = 0.24
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Frame = +3
Query: 258 RYVYQPLDKLYMLLITTKASNILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAFD 437
+ +Y+ LY +L + N L LET+ L+ + +Y + E +V+ F D
Sbjct: 79 KLIYRRYASLYFVLCISDGDNELSALETVHLYVESLDKYFGHVCELDVIFNFDRAYFLAD 138
Query: 438 EIVALGYRESVNLAQV-RSFVEMDSHEEKI 524
E++ G+ + N A V R+ D +EK+
Sbjct: 139 ELLLGGHLQETNRATVLRNARAEDELDEKV 168
>UniRef50_Q7RCE5 Cluster: Clathrin coat assembly like protein; n=1;
Plasmodium yoelii yoelii|Rep: Clathrin coat assembly
like protein - Plasmodium yoelii yoelii
Length = 472
Score = 37.1 bits (82), Expect = 0.55
Identities = 34/140 (24%), Positives = 64/140 (45%), Gaps = 4/140 (2%)
Frame = +3
Query: 90 NKMVLIAATVCTKSGKALVSRQFV-EMTKARIEGLLAAFPKLMTGGRQHTFVETESVRYV 266
+KMV+ + + G +++R F ++ K E + KL G F + +
Sbjct: 89 DKMVISQFYILSPRGDTIINRDFRGDVLKGSAE-IFFRKVKLHKGDPPPLFY-LNGINFC 146
Query: 267 YQPLDKLYMLLITTKASNILED--LETLRLFSRVVPEYCVQLTETEVLNQAFNLLF-AFD 437
+ + LY +L T NI +E L ++ ++C QLTE E++ F L++ D
Sbjct: 147 FLKNNNLYFVL--TSLFNISPSYLVELLYRLLKIFKDFCGQLTE-EIIRTNFILIYEIID 203
Query: 438 EIVALGYRESVNLAQVRSFV 497
E++ GY ++ N +R +
Sbjct: 204 EVIDYGYLQNSNTEYIRYLI 223
>UniRef50_Q3IRX8 Cluster: Probable nitrate reductase/ sulfite
dehydrogenase; n=1; Natronomonas pharaonis DSM 2160|Rep:
Probable nitrate reductase/ sulfite dehydrogenase -
Natronomonas pharaonis (strain DSM 2160 / ATCC 35678)
Length = 508
Score = 35.1 bits (77), Expect = 2.2
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 7/51 (13%)
Frame = +2
Query: 605 IGGGQTWPAAALT------DVLRQWLW*LDDVLVVSI*IYCRE-DSNDTGQ 736
I GG+TW AAAL+ D +RQW++ +DD +Y R D DT Q
Sbjct: 435 IDGGETWTAAALSGQLDNPDTIRQWVYEIDDPQQDEYEVYARTIDGTDTIQ 485
>UniRef50_UPI00006CF807 Cluster: hypothetical protein
TTHERM_00543640; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00543640 - Tetrahymena
thermophila SB210
Length = 554
Score = 34.7 bits (76), Expect = 3.0
Identities = 18/53 (33%), Positives = 30/53 (56%)
Frame = +3
Query: 300 ITTKASNILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIVALGY 458
I T S IL++ ETL+ FS + Y ++ +TE+L+Q + + EI + Y
Sbjct: 162 IFTVISEILKESETLKSFSLEILNYPIKSNDTEILSQGISANKSLKEIEIVSY 214
>UniRef50_Q4SPT3 Cluster: Chromosome 7 SCAF14536, whole genome
shotgun sequence; n=9; Euteleostomi|Rep: Chromosome 7
SCAF14536, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 449
Score = 34.7 bits (76), Expect = 3.0
Identities = 24/133 (18%), Positives = 62/133 (46%), Gaps = 2/133 (1%)
Frame = +3
Query: 117 VCTKSGKALVSRQFVEMTKARIEGLLAAFPKLMTGGRQHTFVETESVRYVYQPLDKLYML 296
+ + G L+ + + + ++ + +TG + + + + +V+ LY +
Sbjct: 7 ILSSKGDHLIYKDYRGDAGSDVQNIFYEKVTALTGDQPPVVMTHKDIYFVHIRQGGLYWV 66
Query: 297 LITTKA-SNILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLF-AFDEIVALGYRESV 470
TT S+ +E L + +V +YC ++E V F L++ DE++ GY ++
Sbjct: 67 ATTTAVDSSPFTVIEFLNRLAALVKDYCGNVSEKSV-QMNFALIYELLDEVLDYGYIQTT 125
Query: 471 NLAQVRSFVEMDS 509
+ +++F++ ++
Sbjct: 126 SSDVLKNFIQTEA 138
>UniRef50_Q0MX07 Cluster: Putative uncharacterized protein; n=1;
Phyllostachys edulis|Rep: Putative uncharacterized
protein - Phyllostachys edulis
Length = 153
Score = 34.3 bits (75), Expect = 3.9
Identities = 23/75 (30%), Positives = 34/75 (45%)
Frame = -3
Query: 702 IQMETTRTSSSYQSHCRRTSVSAAAGHVWPPPISHAATP*RVRACGSLPRVLGSALRLDK 523
+Q RT S++ S S A PP + +ATP RAC + P AL + K
Sbjct: 48 LQGRQQRTRSNFGSMSTSRSTLGQAKTALPP-VFRSATPFMSRACSAAPPPPSRALEMSK 106
Query: 522 SFPRESPFQQTNGPA 478
S ++P Q ++ A
Sbjct: 107 STSVQAPAQSSSSVA 121
>UniRef50_O00189 Cluster: AP-4 complex subunit mu-1; n=34;
Eutheria|Rep: AP-4 complex subunit mu-1 - Homo sapiens
(Human)
Length = 453
Score = 34.3 bits (75), Expect = 3.9
Identities = 16/75 (21%), Positives = 39/75 (52%)
Frame = +3
Query: 285 LYMLLITTKASNILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIVALGYRE 464
LY+++ T++ + LE L + ++ +YC L E + + DE++ GY +
Sbjct: 64 LYLVVTTSENVSPFSLLELLSRLATLLGDYCGSLGEGTISRNVALVYELLDEVLDYGYVQ 123
Query: 465 SVNLAQVRSFVEMDS 509
+ + +R+F++ ++
Sbjct: 124 TTSTEMLRNFIQTEA 138
>UniRef50_O23685 Cluster: Clathrin assembly protein AP19 homolog;
n=13; Eukaryota|Rep: Clathrin assembly protein AP19
homolog - Arabidopsis thaliana (Mouse-ear cress)
Length = 162
Score = 33.9 bits (74), Expect = 5.2
Identities = 19/82 (23%), Positives = 35/82 (42%)
Frame = +3
Query: 210 LMTGGRQHTFVETESVRYVYQPLDKLYMLLITTKASNILEDLETLRLFSRVVPEYCVQLT 389
L G + FVE + VY+ LY + + N LE LE + + ++ Y +
Sbjct: 40 LNRGPKLCNFVEWRGYKVVYKRYASLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSVC 99
Query: 390 ETEVLNQAFNLLFAFDEIVALG 455
E +++ + DE++ G
Sbjct: 100 ELDLIFNFHKAYYILDELLIAG 121
>UniRef50_Q4UEZ8 Cluster: Clathrin-coat assembly protein, putative;
n=2; Theileria|Rep: Clathrin-coat assembly protein,
putative - Theileria annulata
Length = 461
Score = 33.9 bits (74), Expect = 5.2
Identities = 28/125 (22%), Positives = 53/125 (42%), Gaps = 1/125 (0%)
Frame = +3
Query: 117 VCTKSGKALVSRQFVEMTKARIEGLLAAFPKLMTGGRQHTFVETESVRYVYQPLDKLYML 296
+ + SG L+SR F T ++ + L E E + Y Y LY +
Sbjct: 8 IISHSGDVLLSRNFRNETTKNVDNF---YNYLKENSNIGPIFELEGMLYFYIRRSNLYFV 64
Query: 297 LITTKASNILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAF-DEIVALGYRESVN 473
+ T ++ +E L + + ++ L E E + F L + DEI+ GY + ++
Sbjct: 65 MSTRYITSPSYVMELLNKITNYLKDFIGILNE-ETIKSNFVLAYEILDEILDYGYIQCIS 123
Query: 474 LAQVR 488
+ Q++
Sbjct: 124 INQLK 128
>UniRef50_O16867 Cluster: Basic helix-loop-helix neural
transcription factor TAP; n=2; Sophophora|Rep: Basic
helix-loop-helix neural transcription factor TAP -
Drosophila melanogaster (Fruit fly)
Length = 398
Score = 33.9 bits (74), Expect = 5.2
Identities = 18/59 (30%), Positives = 37/59 (62%)
Frame = +3
Query: 318 NILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIVALGYRESVNLAQVRSF 494
N+ + LE LR+ +PE +LT+ E+L A N +FA ++++ G +++L ++++F
Sbjct: 169 NLNDALEKLRVTLPSLPEE-TKLTKIEILRFAHNYIFALEQVLESGGSINLDLEKLQNF 226
>UniRef50_Q9BXS5 Cluster: AP-1 complex subunit mu-1; n=137;
Eukaryota|Rep: AP-1 complex subunit mu-1 - Homo sapiens
(Human)
Length = 423
Score = 33.9 bits (74), Expect = 5.2
Identities = 24/137 (17%), Positives = 58/137 (42%), Gaps = 1/137 (0%)
Frame = +3
Query: 108 AATVCTKSGKALVSRQFV-EMTKARIEGLLAAFPKLMTGGRQHTFVETESVRYVYQPLDK 284
A V GK L+ R + ++ + +E + + G + VR+++ +
Sbjct: 5 AVYVLDLKGKVLICRNYRGDVDMSEVEHFMPILMEKEEEGMLSPILAHGGVRFMWIKHNN 64
Query: 285 LYMLLITTKASNILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIVALGYRE 464
LY++ + K + + L +V EY +L E + + + DE++ GY +
Sbjct: 65 LYLVATSKKNACVSLVFSFLYKVVQVFSEYFKELEEESIRDNFVIIYELLDELMDFGYPQ 124
Query: 465 SVNLAQVRSFVEMDSHE 515
+ + ++ ++ + H+
Sbjct: 125 TTDSKILQEYITQEGHK 141
>UniRef50_Q677N1 Cluster: Putative uncharacterized protein; n=1;
Lymphocystis disease virus - isolate China|Rep: Putative
uncharacterized protein - Lymphocystis disease virus -
isolate China
Length = 153
Score = 33.5 bits (73), Expect = 6.8
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Frame = +3
Query: 270 QPLDKLYMLLITTKASNILEDLE-TLRLFS--RVVPEYCVQLTETEVLNQAFNLLFAFDE 440
+PL++ ++ I +K SN DL+ T + F ++ +YC EVLN+ + L+ F++
Sbjct: 79 KPLNQYKLVKIHSKQSNYFIDLKKTYKYFEFVTIILQYCNPFIFDEVLNELYTLIAYFEQ 138
Query: 441 I 443
I
Sbjct: 139 I 139
>UniRef50_A6PQ87 Cluster: Putative uncharacterized protein; n=1;
Victivallis vadensis ATCC BAA-548|Rep: Putative
uncharacterized protein - Victivallis vadensis ATCC
BAA-548
Length = 389
Score = 33.5 bits (73), Expect = 6.8
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = -2
Query: 757 RPTVRVSLAGVVGIFSAIDSDGDDEDIVELPKPLPKDICERGGWPRLAASNL-SRC 593
+P + +AG GIF + D E ++ +P+ + R GW +LA NL +RC
Sbjct: 241 KPLNHLEIAGKDGIFHQAEGTIDHERLIIASPLVPEPVSVRFGWHKLANPNLVNRC 296
>UniRef50_Q550G8 Cluster: Clathrin-adaptor medium chain apm 4; n=3;
Dictyostelium discoideum|Rep: Clathrin-adaptor medium
chain apm 4 - Dictyostelium discoideum AX4
Length = 530
Score = 33.5 bits (73), Expect = 6.8
Identities = 20/84 (23%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = +3
Query: 249 ESVRYVYQPLDKLYMLLITTKASNILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLF 428
+ + Y+Y ++Y + T + E L S+++ +Y LTE E + F L++
Sbjct: 50 DGINYLYIKKREMYFVFTTRLLVSPSLGFELLNRASKIIQDYTASLTE-EAIRLNFILIY 108
Query: 429 -AFDEIVALGYRESVNLAQVRSFV 497
DE++ G +S +++FV
Sbjct: 109 ELLDELMDYGVPQSTGTETLKAFV 132
>UniRef50_Q1JSZ4 Cluster: Clathrin coat assembly protein, putative;
n=1; Toxoplasma gondii|Rep: Clathrin coat assembly
protein, putative - Toxoplasma gondii
Length = 517
Score = 33.5 bits (73), Expect = 6.8
Identities = 24/108 (22%), Positives = 49/108 (45%), Gaps = 3/108 (2%)
Frame = +3
Query: 183 EGLLAAFPK--LMTGGRQHTFVETESVRYVYQPLDKLYMLLITTKASNILEDLETLRLFS 356
+G+LA + L G + + + LY +L T + + +E L +
Sbjct: 74 QGMLAMMNRGGLGAAGEASPLFCVNGITFAFLRRSGLYFVLTTQQNPSPAVLIELLHRLT 133
Query: 357 RVVPEYCVQLTETEVLNQAFNLLFAF-DEIVALGYRESVNLAQVRSFV 497
+++ ++C L E E + + F +++ DEIV GY + + ++S V
Sbjct: 134 KIIQDFCGVLNE-EAIRKNFVMIYELLDEIVDYGYPQLTSTESLKSAV 180
>UniRef50_A7TF49 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 443
Score = 33.5 bits (73), Expect = 6.8
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +3
Query: 243 ETESVRYVYQPLDKLYMLLITTKASNILEDLETLRLFSRVVPEYCVQLTETEVLNQAFN 419
ETE + + +KL LL+ K S+++ED + + SR + + + EVL+ F+
Sbjct: 5 ETEFIETTDKLSEKLVKLLVEKKNSDVIEDDRRIHVLSRSRSRFAAPVAKDEVLSMEFH 63
>UniRef50_Q9Y7L6 Cluster: AP-2 complex subunit sigma; n=18;
Eukaryota|Rep: AP-2 complex subunit sigma -
Schizosaccharomyces pombe (Fission yeast)
Length = 143
Score = 33.5 bits (73), Expect = 6.8
Identities = 28/128 (21%), Positives = 51/128 (39%), Gaps = 3/128 (2%)
Frame = +3
Query: 126 KSGKALVSRQFVEMTKARIEGLLAAFPKLMTGGRQH---TFVETESVRYVYQPLDKLYML 296
+ GK +S+ +V L A +L++ Q F+E E+ + VY+ LY
Sbjct: 10 RHGKNRLSKYYVPFDDDEKVRLKARIHQLISQRNQKFQANFLEWENSKLVYRRYAGLYFC 69
Query: 297 LITTKASNILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIVALGYRESVNL 476
N L LE + F ++ + + E +++ + + DEI+ G N
Sbjct: 70 FCVDSTDNDLAILEMIHFFVEILDSFFGNVCELDLIFNFYKVSAILDEIILGGEIGESNK 129
Query: 477 AQVRSFVE 500
V +E
Sbjct: 130 KSVLERIE 137
>UniRef50_Q09718 Cluster: AP-2 complex subunit mu; n=1;
Schizosaccharomyces pombe|Rep: AP-2 complex subunit mu -
Schizosaccharomyces pombe (Fission yeast)
Length = 446
Score = 33.5 bits (73), Expect = 6.8
Identities = 20/76 (26%), Positives = 34/76 (44%)
Frame = +3
Query: 228 QHTFVETESVRYVYQPLDKLYMLLITTKASNILEDLETLRLFSRVVPEYCVQLTETEVLN 407
+H V S Y+Y + LY++ IT N++ LE L + + Y +L E V +
Sbjct: 43 RHPIVSIGSSTYIYTKHEDLYVVAITKGNPNVMIVLEFLESLIQDLTHYFGKLNENTVKD 102
Query: 408 QAFNLLFAFDEIVALG 455
+ DE++ G
Sbjct: 103 NVSFIFELLDEMIDYG 118
>UniRef50_A1BFC9 Cluster: Carbamoyl-phosphate synthase L chain,
ATP-binding; n=3; Bacteria|Rep: Carbamoyl-phosphate
synthase L chain, ATP-binding - Chlorobium
phaeobacteroides (strain DSM 266)
Length = 485
Score = 33.1 bits (72), Expect = 9.0
Identities = 18/79 (22%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +3
Query: 54 GVFYEN*I*EYKNKMVLIAATVCTKSGKALVSRQFVEMTKARIEGLLAAFPKLMTGGRQH 233
GV+ + I Y + ++++ T A++ + + R+EG+ P L++ R H
Sbjct: 375 GVYEGSEIPPYYDSLIMLLMTSGPDRETAIMKMESILCRNLRVEGVKTLAPMLLSIIRHH 434
Query: 234 TFVETE-SVRYVYQPLDKL 287
F+ + S R++ + +D+L
Sbjct: 435 NFIRGDFSTRFIEEHMDEL 453
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 846,515,238
Number of Sequences: 1657284
Number of extensions: 16977642
Number of successful extensions: 48058
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 46004
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48014
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 74193458591
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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