Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_A23
(845 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_31870| Best HMM Match : No HMM Matches (HMM E-Value=.) 275 3e-74
SB_7068| Best HMM Match : ResIII (HMM E-Value=0.29) 37 0.024
SB_34511| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.095
SB_45476| Best HMM Match : Clat_adaptor_s (HMM E-Value=0) 34 0.13
SB_10023| Best HMM Match : DUF1502 (HMM E-Value=9.2) 34 0.13
SB_56070| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.17
SB_40361| Best HMM Match : ResIII (HMM E-Value=0.42) 34 0.17
SB_40233| Best HMM Match : Ion_trans_2 (HMM E-Value=1.4e-23) 34 0.17
SB_21089| Best HMM Match : DUF1502 (HMM E-Value=8.4) 34 0.17
SB_6375| Best HMM Match : DUF1388 (HMM E-Value=7.5) 34 0.17
SB_58547| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.17
SB_55648| Best HMM Match : NCD3G (HMM E-Value=5.3) 34 0.17
SB_53706| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.17
SB_29713| Best HMM Match : Lentiviral_Tat (HMM E-Value=1.1) 34 0.17
SB_12136| Best HMM Match : ResIII (HMM E-Value=0.24) 34 0.17
SB_30830| Best HMM Match : PTN_MK_N (HMM E-Value=6.8) 33 0.29
SB_29024| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.29
SB_42722| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.39
SB_14637| Best HMM Match : WCCH (HMM E-Value=3.5) 33 0.39
SB_3463| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.39
SB_52975| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.51
SB_20837| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.51
SB_22826| Best HMM Match : F5_F8_type_C (HMM E-Value=7.9e-09) 31 0.89
SB_22253| Best HMM Match : Pkinase (HMM E-Value=0) 31 0.89
SB_16527| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_42| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_29634| Best HMM Match : Endonuclease_7 (HMM E-Value=8.2) 31 1.2
SB_21771| Best HMM Match : TP2 (HMM E-Value=0.34) 30 2.1
SB_37571| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.7
SB_2298| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.7
SB_51306| Best HMM Match : Peptidase_C27 (HMM E-Value=0.78) 30 2.7
SB_32978| Best HMM Match : GATA (HMM E-Value=5.5) 30 2.7
SB_18258| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.7
SB_59524| Best HMM Match : zf-UBP (HMM E-Value=6.8) 29 3.6
SB_56953| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_37982| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_35441| Best HMM Match : ResIII (HMM E-Value=0.078) 29 3.6
SB_29795| Best HMM Match : ResIII (HMM E-Value=0.16) 29 3.6
SB_29317| Best HMM Match : Sushi (HMM E-Value=6.9e-26) 29 3.6
SB_25787| Best HMM Match : Asparaginase_2 (HMM E-Value=0.097) 29 3.6
SB_13062| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_2787| Best HMM Match : DUF1265 (HMM E-Value=3.2) 29 3.6
SB_59126| Best HMM Match : zf-A20 (HMM E-Value=4.4) 29 3.6
SB_56349| Best HMM Match : LIM (HMM E-Value=1.3) 29 3.6
SB_54646| Best HMM Match : WCCH (HMM E-Value=1.3) 29 3.6
SB_45955| Best HMM Match : SMC_hinge (HMM E-Value=2) 29 3.6
SB_35477| Best HMM Match : zf-TAZ (HMM E-Value=1.9) 29 3.6
SB_13959| Best HMM Match : WCCH (HMM E-Value=7.2) 29 3.6
SB_11212| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_368| Best HMM Match : WCCH (HMM E-Value=3.5) 29 3.6
SB_50613| Best HMM Match : 7tm_1 (HMM E-Value=0.24) 29 4.7
SB_14872| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
>SB_31870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1378
Score = 275 bits (674), Expect = 3e-74
Identities = 145/252 (57%), Positives = 173/252 (68%), Gaps = 9/252 (3%)
Frame = +3
Query: 99 VLIAATVCTKSGKALVSRQFVEMTKARIEGLLAAFPKLMTGG---RQHTFVETESVRYVY 269
VL+AA +CTK+GKA++SRQFVEMT++RIEGLL+AFPKLMT G +QHTFVETESVRYVY
Sbjct: 470 VLLAAAICTKNGKAIISRQFVEMTRSRIEGLLSAFPKLMTSGSSVKQHTFVETESVRYVY 529
Query: 270 QPLDKLYMLLITTKASNILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIVA 449
QPL+KLYMLLITTK SNILEDLETLRLFSRV+PEYC + E+E+ AF L+FAFDEIVA
Sbjct: 530 QPLEKLYMLLITTKHSNILEDLETLRLFSRVIPEYCRAMEESEIGEHAFELIFAFDEIVA 589
Query: 450 LGYRESVNLAQVRSFVEMDSHEEKIYQAVRQTQXXXXXXXXXXXXXXLQRERLEAAK--- 620
LGYRE+VNLAQ+R+F EMDSHEEK++QAVRQTQ LQ ++ AAK
Sbjct: 590 LGYRENVNLAQIRTFTEMDSHEEKVFQAVRQTQEREAKEEMKKRAKELQAAKVAAAKGRG 649
Query: 621 -RGQPPRXXXXXXXXXXXXXXXXXXXXXXIAEKIPT-TPARDTRTVGR-SAMKLGSRGTD 791
R P + + P P+ +R G AMKLGS+ D
Sbjct: 650 GRVAMPGFGGMGSGSTKSDISSGNMDTVPVIDPTPAPKPSYPSRPAGSGKAMKLGSKSKD 709
Query: 792 ADSFVSRLRXEG 827
DSFV +LR EG
Sbjct: 710 VDSFVDKLRSEG 721
>SB_7068| Best HMM Match : ResIII (HMM E-Value=0.29)
Length = 1131
Score = 36.7 bits (81), Expect = 0.024
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = -3
Query: 840 AP*RHPRCGVGTRTSPRLCRGCRAS 766
AP + P CG+GT++ RLCR CRA+
Sbjct: 170 APPKAPICGIGTQSEKRLCRTCRAN 194
>SB_34511| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2492
Score = 34.7 bits (76), Expect = 0.095
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = -3
Query: 840 AP*RHPRCGVGTRTSPRLCRGCRAS 766
AP + P CG+GTR RLCR C A+
Sbjct: 1807 APPKAPICGIGTRLKTRLCRPCGAN 1831
>SB_45476| Best HMM Match : Clat_adaptor_s (HMM E-Value=0)
Length = 141
Score = 34.3 bits (75), Expect = 0.13
Identities = 27/128 (21%), Positives = 56/128 (43%), Gaps = 2/128 (1%)
Frame = +3
Query: 126 KSGKALVSRQFVEMTKARIEGLLAAFPKLMT-GGRQHT-FVETESVRYVYQPLDKLYMLL 299
++GK +++ ++ + L+ L+T +HT FVE + + VY+ LY
Sbjct: 9 RAGKTRLAKWYMNFDDDEKQKLIEEVHALVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCF 68
Query: 300 ITTKASNILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIVALGYRESVNLA 479
+ N L LE + F V+ E+ + E +++ + + DE+ G + +
Sbjct: 69 CVDVSDNNLYYLEAIHNFVEVLNEFFHNVCELDLVFNFYKVYSVVDEMFLAGELRETSQS 128
Query: 480 QVRSFVEM 503
+V + M
Sbjct: 129 KVLKQLNM 136
>SB_10023| Best HMM Match : DUF1502 (HMM E-Value=9.2)
Length = 151
Score = 34.3 bits (75), Expect = 0.13
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = -3
Query: 840 AP*RHPRCGVGTRTSPRLCRGCRAS 766
AP + P CG+GT++ RLCR C A+
Sbjct: 63 APPKAPGCGIGTQSETRLCRPCGAN 87
>SB_56070| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 779
Score = 33.9 bits (74), Expect = 0.17
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = -3
Query: 840 AP*RHPRCGVGTRTSPRLCRGCRAS 766
AP + P CG+GT++ RLCR C A+
Sbjct: 71 APPKAPVCGIGTQSETRLCRPCGAN 95
>SB_40361| Best HMM Match : ResIII (HMM E-Value=0.42)
Length = 1127
Score = 33.9 bits (74), Expect = 0.17
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = -3
Query: 840 AP*RHPRCGVGTRTSPRLCRGCRAS 766
AP + P CG+GT++ RLCR C A+
Sbjct: 165 APPKAPCCGIGTQSETRLCRPCGAN 189
>SB_40233| Best HMM Match : Ion_trans_2 (HMM E-Value=1.4e-23)
Length = 750
Score = 33.9 bits (74), Expect = 0.17
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = -3
Query: 840 AP*RHPRCGVGTRTSPRLCRGCRAS 766
AP + P CG+GT++ RLCR C A+
Sbjct: 53 APPKAPICGIGTQSETRLCRPCGAN 77
>SB_21089| Best HMM Match : DUF1502 (HMM E-Value=8.4)
Length = 139
Score = 33.9 bits (74), Expect = 0.17
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = -3
Query: 840 AP*RHPRCGVGTRTSPRLCRGCRAS 766
AP + P CG+GT++ RLCR C A+
Sbjct: 44 APPKAPVCGIGTQSETRLCRPCGAN 68
>SB_6375| Best HMM Match : DUF1388 (HMM E-Value=7.5)
Length = 173
Score = 33.9 bits (74), Expect = 0.17
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = -3
Query: 840 AP*RHPRCGVGTRTSPRLCRGCRAS 766
AP + P CG+GT++ RLCR C A+
Sbjct: 121 APPKAPVCGIGTQSETRLCRPCGAN 145
>SB_58547| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 440
Score = 33.9 bits (74), Expect = 0.17
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = -3
Query: 840 AP*RHPRCGVGTRTSPRLCRGCRAS 766
AP + P CG+GT++ RLCR C A+
Sbjct: 158 APPKAPVCGIGTQSETRLCRPCGAN 182
>SB_55648| Best HMM Match : NCD3G (HMM E-Value=5.3)
Length = 446
Score = 33.9 bits (74), Expect = 0.17
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = -3
Query: 840 AP*RHPRCGVGTRTSPRLCRGCRAS 766
AP + P CG+GT++ RLCR C A+
Sbjct: 165 APPKAPCCGIGTQSETRLCRPCGAN 189
>SB_53706| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1172
Score = 33.9 bits (74), Expect = 0.17
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = -3
Query: 840 AP*RHPRCGVGTRTSPRLCRGCRAS 766
AP + P CG+GT++ RLCR C A+
Sbjct: 51 APPKAPICGIGTQSETRLCRPCGAN 75
>SB_29713| Best HMM Match : Lentiviral_Tat (HMM E-Value=1.1)
Length = 292
Score = 33.9 bits (74), Expect = 0.17
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = -3
Query: 840 AP*RHPRCGVGTRTSPRLCRGCRAS 766
AP + P CG+GT++ RLCR C A+
Sbjct: 125 APPKAPICGIGTQSETRLCRPCGAN 149
>SB_12136| Best HMM Match : ResIII (HMM E-Value=0.24)
Length = 1118
Score = 33.9 bits (74), Expect = 0.17
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = -3
Query: 840 AP*RHPRCGVGTRTSPRLCRGCRAS 766
AP + P CG+GT++ RLCR C A+
Sbjct: 44 APPKAPVCGIGTQSETRLCRPCGAN 68
>SB_30830| Best HMM Match : PTN_MK_N (HMM E-Value=6.8)
Length = 755
Score = 33.1 bits (72), Expect = 0.29
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = -3
Query: 840 AP*RHPRCGVGTRTSPRLCRGCRAS 766
AP P CG+GT++ RLCR C A+
Sbjct: 104 APPNAPVCGIGTQSETRLCRPCGAN 128
>SB_29024| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 998
Score = 33.1 bits (72), Expect = 0.29
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -3
Query: 840 AP*RHPRCGVGTRTSPRLCRGC 775
AP + P CGVGT++ RLCR C
Sbjct: 332 APPKAPICGVGTQSETRLCRPC 353
>SB_42722| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 432
Score = 32.7 bits (71), Expect = 0.39
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = -3
Query: 819 CGVGTRTSPRLCRGCRAS 766
CG+GT++ PRLCR C A+
Sbjct: 361 CGIGTQSEPRLCRPCGAN 378
>SB_14637| Best HMM Match : WCCH (HMM E-Value=3.5)
Length = 119
Score = 32.7 bits (71), Expect = 0.39
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = -3
Query: 819 CGVGTRTSPRLCRGCRAS 766
CG+GT++ PRLCR C A+
Sbjct: 48 CGIGTQSEPRLCRPCGAN 65
>SB_3463| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 537
Score = 32.7 bits (71), Expect = 0.39
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -3
Query: 840 AP*RHPRCGVGTRTSPRLCRGC 775
AP + P CG+GT++ RLCR C
Sbjct: 37 APLKAPICGIGTQSETRLCRPC 58
>SB_52975| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1077
Score = 32.3 bits (70), Expect = 0.51
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = -3
Query: 840 AP*RHPRCGVGTRTSPRLCRGCRAS 766
AP + CG+GTR+ RLCR C A+
Sbjct: 54 APPKAAICGIGTRSETRLCRPCGAN 78
>SB_20837| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1304
Score = 32.3 bits (70), Expect = 0.51
Identities = 21/96 (21%), Positives = 47/96 (48%)
Frame = -2
Query: 466 LSLYPRATISSKANSKLKAWFKTSVSVSCTQYSGTTLLKSLNVSRSSRMLLAFVVISNIY 287
+S P +T+S NS + K + + S T T+++ + N++ ++L + + +
Sbjct: 1066 ISKIPSSTVSLPGNSSIMETVKVTPTSSLTTPQNTSVVFT-NITVQDTLVL-YKSSTPVL 1123
Query: 286 NLSSGW*TYLTDSVSTNVCCRPPVISLGKAASRPSM 179
N+SSGW + + +T + + L ++ S S+
Sbjct: 1124 NISSGWNSTVVKESTTTLLLSSSSVPLNESTSNASV 1159
>SB_22826| Best HMM Match : F5_F8_type_C (HMM E-Value=7.9e-09)
Length = 1296
Score = 31.5 bits (68), Expect = 0.89
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = -3
Query: 819 CGVGTRTSPRLCRGCRAS 766
CGVGTR+ RLCR C A+
Sbjct: 180 CGVGTRSETRLCRPCGAN 197
>SB_22253| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 870
Score = 31.5 bits (68), Expect = 0.89
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = -3
Query: 819 CGVGTRTSPRLCRGCRAS 766
CGVGTR+ RLCR C A+
Sbjct: 384 CGVGTRSETRLCRPCGAN 401
>SB_16527| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 518
Score = 31.1 bits (67), Expect = 1.2
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -3
Query: 840 AP*RHPRCGVGTRTSPRLCRGCRAS 766
AP + P CG+GT++ LCR C A+
Sbjct: 67 APPKAPICGIGTQSETLLCRPCGAN 91
>SB_42| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1207
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = -1
Query: 596 LQLLSAFAHAVRCLAFLGLPYGLINLFLVRVHFNKRTDL 480
L LS + + L F G+PY ++N++LV V + + TD+
Sbjct: 90 LVYLSVNTNLISVLVFYGVPYLVVNMWLVIVTYLQHTDI 128
>SB_29634| Best HMM Match : Endonuclease_7 (HMM E-Value=8.2)
Length = 111
Score = 31.1 bits (67), Expect = 1.2
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = -3
Query: 819 CGVGTRTSPRLCRGCRAS 766
CGVGTR+ RLCR C A+
Sbjct: 63 CGVGTRSERRLCRPCGAN 80
>SB_21771| Best HMM Match : TP2 (HMM E-Value=0.34)
Length = 1691
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = -2
Query: 799 ESASVPRLPSFMAERPTVRVSLAGVVGIFSAIDSDGDDEDIVELPKPL 656
+ + PR SF+ P ++ ++ + G S DSD DD+D++ L PL
Sbjct: 1101 DKSDAPR--SFIMNTPDLKTNVKQIYGDLS--DSDFDDDDVILLESPL 1144
>SB_37571| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 258
Score = 29.9 bits (64), Expect = 2.7
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -3
Query: 819 CGVGTRTSPRLCRGC 775
CG+GTR+ RLCR C
Sbjct: 23 CGIGTRSETRLCRPC 37
>SB_2298| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 169
Score = 29.9 bits (64), Expect = 2.7
Identities = 21/72 (29%), Positives = 34/72 (47%)
Frame = +3
Query: 231 HTFVETESVRYVYQPLDKLYMLLITTKASNILEDLETLRLFSRVVPEYCVQLTETEVLNQ 410
HT TE R + + +DK + + + L+D ET + + V LTETE+ +
Sbjct: 96 HTKGSTEDERLLKKIVDKAFEEKVALTIARYLKDQETFPVEPSIRITVNVDLTETEIHSA 155
Query: 411 AFNLLFAFDEIV 446
A + A D I+
Sbjct: 156 AQVIKNAADSIL 167
>SB_51306| Best HMM Match : Peptidase_C27 (HMM E-Value=0.78)
Length = 645
Score = 29.9 bits (64), Expect = 2.7
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -3
Query: 840 AP*RHPRCGVGTRTSPRLCR 781
AP + P CG+GT++ RLCR
Sbjct: 44 APPKAPVCGIGTQSETRLCR 63
>SB_32978| Best HMM Match : GATA (HMM E-Value=5.5)
Length = 93
Score = 29.9 bits (64), Expect = 2.7
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -3
Query: 819 CGVGTRTSPRLCRGCRAS 766
CGVGT++ RLCR C A+
Sbjct: 48 CGVGTQSETRLCRPCGAN 65
>SB_18258| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 498
Score = 29.9 bits (64), Expect = 2.7
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -3
Query: 840 AP*RHPRCGVGTRTSPRLCR 781
AP + P CG+GT++ RLCR
Sbjct: 64 APPKAPVCGIGTQSETRLCR 83
>SB_59524| Best HMM Match : zf-UBP (HMM E-Value=6.8)
Length = 202
Score = 29.5 bits (63), Expect = 3.6
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -3
Query: 819 CGVGTRTSPRLCRGCRAS 766
CG+GT++ RLCR C A+
Sbjct: 48 CGIGTQSETRLCRPCGAN 65
>SB_56953| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 29.5 bits (63), Expect = 3.6
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -3
Query: 819 CGVGTRTSPRLCRGCRAS 766
CG+GT++ RLCR C A+
Sbjct: 55 CGIGTQSETRLCRPCGAN 72
>SB_37982| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 48
Score = 29.5 bits (63), Expect = 3.6
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -3
Query: 819 CGVGTRTSPRLCRGCRAS 766
CG+GT++ RLCR C A+
Sbjct: 3 CGIGTQSETRLCRPCGAN 20
>SB_35441| Best HMM Match : ResIII (HMM E-Value=0.078)
Length = 767
Score = 29.5 bits (63), Expect = 3.6
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -3
Query: 819 CGVGTRTSPRLCRGCRAS 766
CG+GT++ RLCR C A+
Sbjct: 48 CGIGTQSETRLCRPCGAN 65
>SB_29795| Best HMM Match : ResIII (HMM E-Value=0.16)
Length = 818
Score = 29.5 bits (63), Expect = 3.6
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -3
Query: 819 CGVGTRTSPRLCRGCRAS 766
CG+GT++ RLCR C A+
Sbjct: 48 CGIGTQSETRLCRPCGAN 65
>SB_29317| Best HMM Match : Sushi (HMM E-Value=6.9e-26)
Length = 803
Score = 29.5 bits (63), Expect = 3.6
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -3
Query: 819 CGVGTRTSPRLCRGCRAS 766
CG+GT++ RLCR C A+
Sbjct: 227 CGIGTQSETRLCRPCGAN 244
>SB_25787| Best HMM Match : Asparaginase_2 (HMM E-Value=0.097)
Length = 1623
Score = 29.5 bits (63), Expect = 3.6
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -3
Query: 840 AP*RHPRCGVGTRTSPRLCRGC 775
AP + CG+GT++ RLCR C
Sbjct: 287 APPKASVCGIGTQSETRLCRPC 308
>SB_13062| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +3
Query: 150 RQFVEMTKARIEGLLAAFPKLMTGGRQHTFVETESVRYVYQPLDKLYML 296
R+ +E K R+E LL+ PK++ H ET+S ++ +D+L L
Sbjct: 33 RRMLEGLKNRLEALLS--PKIVAAFNNHCLDETKSYVKIFTAIDRLDQL 79
>SB_2787| Best HMM Match : DUF1265 (HMM E-Value=3.2)
Length = 795
Score = 29.5 bits (63), Expect = 3.6
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -3
Query: 819 CGVGTRTSPRLCRGCRAS 766
CG+GT++ RLCR C A+
Sbjct: 88 CGIGTQSETRLCRPCGAN 105
>SB_59126| Best HMM Match : zf-A20 (HMM E-Value=4.4)
Length = 860
Score = 29.5 bits (63), Expect = 3.6
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -3
Query: 819 CGVGTRTSPRLCRGCRAS 766
CG+GT++ RLCR C A+
Sbjct: 48 CGIGTQSETRLCRPCGAN 65
>SB_56349| Best HMM Match : LIM (HMM E-Value=1.3)
Length = 190
Score = 29.5 bits (63), Expect = 3.6
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -3
Query: 819 CGVGTRTSPRLCRGCRAS 766
CG+GT++ RLCR C A+
Sbjct: 3 CGIGTQSETRLCRPCGAN 20
>SB_54646| Best HMM Match : WCCH (HMM E-Value=1.3)
Length = 744
Score = 29.5 bits (63), Expect = 3.6
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -3
Query: 819 CGVGTRTSPRLCRGCRAS 766
CG+GT++ RLCR C A+
Sbjct: 48 CGIGTQSETRLCRPCGAN 65
>SB_45955| Best HMM Match : SMC_hinge (HMM E-Value=2)
Length = 665
Score = 29.5 bits (63), Expect = 3.6
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -3
Query: 819 CGVGTRTSPRLCRGCRAS 766
CG+GT++ RLCR C A+
Sbjct: 98 CGIGTQSETRLCRPCGAN 115
>SB_35477| Best HMM Match : zf-TAZ (HMM E-Value=1.9)
Length = 163
Score = 29.5 bits (63), Expect = 3.6
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -3
Query: 819 CGVGTRTSPRLCRGCRAS 766
CG+GT++ RLCR C A+
Sbjct: 115 CGIGTQSETRLCRPCGAN 132
>SB_13959| Best HMM Match : WCCH (HMM E-Value=7.2)
Length = 101
Score = 29.5 bits (63), Expect = 3.6
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -3
Query: 819 CGVGTRTSPRLCRGCRAS 766
CG+GT++ RLCR C A+
Sbjct: 53 CGIGTQSETRLCRPCGAN 70
>SB_11212| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1175
Score = 29.5 bits (63), Expect = 3.6
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -3
Query: 819 CGVGTRTSPRLCRGCRAS 766
CG+GT++ RLCR C A+
Sbjct: 707 CGIGTQSETRLCRPCGAN 724
>SB_368| Best HMM Match : WCCH (HMM E-Value=3.5)
Length = 115
Score = 29.5 bits (63), Expect = 3.6
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -3
Query: 819 CGVGTRTSPRLCRGCRAS 766
CG+GT++ RLCR C A+
Sbjct: 48 CGIGTQSETRLCRPCGAN 65
>SB_50613| Best HMM Match : 7tm_1 (HMM E-Value=0.24)
Length = 273
Score = 29.1 bits (62), Expect = 4.7
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -1
Query: 161 DELAGHQSFA*LRTNCSGYKYHLVFIFLYLIFIKNT*NILG 39
D + G F N +GYK +VF+ L+F+ + N+ G
Sbjct: 40 DLMVGLSLFVLSINNVTGYKQQVVFVAFRLLFVSSVTNLFG 80
>SB_14872| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1182
Score = 29.1 bits (62), Expect = 4.7
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = -2
Query: 475 RLTLSLYPRATISSKANSKLKAWFKTSVSVSCTQYSGTTLLKSLNVSRSS 326
+LTL+L + S +N KL++ K SVS+S S + K L V SS
Sbjct: 605 KLTLNLEKTKCMLSGSNRKLESKIKLSVSISNYNVSNVSNFKYLGVFISS 654
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,656,643
Number of Sequences: 59808
Number of extensions: 553663
Number of successful extensions: 3464
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 3323
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3460
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2395401800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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