Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_A22
         (676 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   4.0  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    22   4.0  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    22   5.3  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   9.2  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +2

Query: 500 ENSDDIQNLERELGKNGLY 556
           +N D ++ LE  L K+GL+
Sbjct: 142 DNQDHLRRLEMSLEKSGLF 160


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 12/49 (24%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
 Frame = +2

Query: 155 MYHLVXIPIDRGLVHHVDYWGEGKVTNLDKIRGFP---RSYNVNEQFAL 292
           +Y L+    D  + + V YW +    N   I G P   R++ ++E  ++
Sbjct: 256 LYELIDRKYDENVDYQVRYWLQKGAPNNKLILGIPAYGRAWKMDEDSSI 304


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = -3

Query: 377 CNWKCRCRPQTRRGSCWVFAFPRCGP 300
           CN K  C+ ++   SC V   P   P
Sbjct: 135 CNGKPDCKDESDENSCTVETDPNRAP 160


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 171 FTRWYIPK*GIGEYA 127
           F+ W I + GIG YA
Sbjct: 28  FSNWAIYRPGIGRYA 42


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,808
Number of Sequences: 336
Number of extensions: 2930
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)