Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_A22
         (676 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ518576-1|ABF66618.1|  276|Anopheles gambiae putative cytoplasm...    24   5.0  
AY183375-1|AAO24765.1|  679|Anopheles gambiae NADPH cytochrome P...    24   5.0  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   6.7  

>DQ518576-1|ABF66618.1|  276|Anopheles gambiae putative cytoplasmic
           carbonic anhydrase protein.
          Length = 276

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 13/47 (27%), Positives = 19/47 (40%)
 Frame = +2

Query: 200 HVDYWGEGKVTNLDKIRGFPRSYNVNEQFALVSKGHNEGKQIPNRIP 340
           H+ +W + K  +  +  G P    V   F  V K H E   I   +P
Sbjct: 120 HLVHWNQSKYKSFAEAAGHPDGLAVLGVFLKVGKPHPELDIIARLLP 166


>AY183375-1|AAO24765.1|  679|Anopheles gambiae NADPH cytochrome P450
           reductase protein.
          Length = 679

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = +2

Query: 455 IVNASEGLVVAYGYSENSDDIQNLERELGKNGLYYG 562
           +V    GL    G+ +  D  +   +E+G+  LY+G
Sbjct: 532 MVGPGTGLAPFRGFIQERDHCKQEGKEIGQTTLYFG 567


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +2

Query: 218 EGKVTNLDKIRGFPRSYNVNEQFALVSK 301
           E  V +   I+GF R Y V E+  LV K
Sbjct: 389 ESGVQSAKLIKGFKREYPVLEKLVLVLK 416


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 635,947
Number of Sequences: 2352
Number of extensions: 12408
Number of successful extensions: 22
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67741110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)