Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_A20
(848 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0183 + 1422798-1422829,1422989-1423239,1423669-1423945,142... 40 0.003
04_04_0627 + 26693608-26694276 37 0.018
05_07_0224 + 28500745-28500978,28501933-28502332,28502416-285024... 31 0.88
01_06_0042 - 25911662-25911736,25912409-25912607,25913275-259133... 31 1.2
03_02_0714 + 10617860-10618588 31 1.5
05_07_0139 - 27968816-27968890,27969065-27969456,27969558-279696... 30 2.0
01_06_0168 + 27165323-27165373,27166659-27167067,27167666-271677... 30 2.0
02_01_0375 + 2712289-2712957 30 2.7
06_03_1337 + 29434240-29434449,29434504-29434675,29435067-294351... 29 3.5
05_07_0262 + 28769335-28769391,28769732-28769855,28770175-287702... 29 3.5
03_02_0413 - 8224494-8224553,8224838-8225004,8225666-8225771,822... 29 4.7
01_05_0782 - 25148733-25149166,25149252-25149415,25149636-251496... 29 4.7
03_05_0714 - 27076881-27077218,27077332-27077482,27077768-270779... 29 6.2
02_05_0640 - 30558523-30559027,30559123-30559252,30559388-305598... 29 6.2
02_01_0278 - 1851338-1851412,1851579-1851819,1851946-1852047,185... 29 6.2
08_02_1482 - 27428208-27428514,27428605-27428906,27431176-274322... 28 8.2
>06_01_0183 +
1422798-1422829,1422989-1423239,1423669-1423945,
1424827-1425034,1425129-1425203,1425301-1425375,
1425494-1425574,1425666-1425740,1425829-1426002,
1426105-1426134
Length = 425
Score = 39.9 bits (89), Expect = 0.003
Identities = 45/191 (23%), Positives = 81/191 (42%), Gaps = 6/191 (3%)
Frame = +1
Query: 247 IIIKVNNQSIGRDKLARFIQYISKLVWHQLETRNANKYSIDRIKNLENAFSSFRKILRLG 426
++I N++ RDK+ R IQY SK V + +N++ + S RK+ RL
Sbjct: 205 LLILYLNKAEARDKICRAIQYGSKFV---------SNGQPGPAQNVDKSTSLARKVFRLF 255
Query: 427 RCIDVCYIALDSMSIEDPFLRLTITVSKLS-HSLFLYADHIVWLAKSGFLKTDSDTWNQT 603
+ ++ + + + P + + SK + S FL+ D IVW ++G K +
Sbjct: 256 KFVNDLHALISPPAKGTPLPLILLGKSKNALLSTFLFLDQIVWAGRTGIYKNKERAEFLS 315
Query: 604 ANKFWLLSIIANLARDLYEILHLLQLHNS-----KFLRPSDLLNLSVHKFDLMSTLKHIH 768
F+ + +N + E+ L +L S K L+ +LL ++ L +
Sbjct: 316 KIAFYCF-LGSNTCTSIIEVAELQRLSKSMKKLEKELKHQELLKNEQYQMKLQKCNERRL 374
Query: 769 VLLLCHRDIFV 801
L+ DI V
Sbjct: 375 ALIKSSLDIVV 385
>04_04_0627 + 26693608-26694276
Length = 222
Score = 37.1 bits (82), Expect = 0.018
Identities = 26/99 (26%), Positives = 41/99 (41%)
Frame = +1
Query: 277 GRDKLARFIQYISKLVWHQLETRNANKYSIDRIKNLENAFSSFRKILRLGRCIDVCYIAL 456
G DKL + QY+SKL E+ + R KN E + RK R GR + L
Sbjct: 19 GIDKLVKTFQYVSKLAHWAAESSSPG--LAGRAKNWETSAGLSRKAFRTGRFL----TGL 72
Query: 457 DSMSIEDPFLRLTITVSKLSHSLFLYADHIVWLAKSGFL 573
+ + ++ ++ + DH WL++ G L
Sbjct: 73 NGLRRAPGEFGALAVLANAGEMVYFFFDHFTWLSRVGVL 111
>05_07_0224 +
28500745-28500978,28501933-28502332,28502416-28502480,
28502633-28502692,28502865-28503014,28503386-28503541,
28503648-28503785,28503874-28503947,28504172-28504273,
28505415-28505604,28505756-28505830
Length = 547
Score = 31.5 bits (68), Expect = 0.88
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +1
Query: 646 RDLYEILHLLQLHNSKFLRPSDLLNLSVHKF---DLMSTLKHIHVLLLCHRDI 795
RD+Y I L++ + ++ +D L H+F L+ +K+IH + HRD+
Sbjct: 167 RDIYVIFELMESDLHQVIKANDDLTPEHHQFFLYQLLRGMKYIHAASVFHRDL 219
>01_06_0042 -
25911662-25911736,25912409-25912607,25913275-25913348,
25913431-25913580,25913666-25913821,25915378-25915464,
25915706-25915765,25915878-25916414,25917292-25917585
Length = 543
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +1
Query: 646 RDLYEILHLLQLHNSKFLRPSDLLNLSVHKF---DLMSTLKHIHVLLLCHRDI 795
RD+Y I L++ + ++ +D L H+F L+ +K+IH + HRD+
Sbjct: 190 RDIYIIFELMESDLHQVIKANDDLTPEHHQFFLYQLLRGMKYIHAASVFHRDL 242
>03_02_0714 + 10617860-10618588
Length = 242
Score = 30.7 bits (66), Expect = 1.5
Identities = 26/99 (26%), Positives = 46/99 (46%)
Frame = +1
Query: 277 GRDKLARFIQYISKLVWHQLETRNANKYSIDRIKNLENAFSSFRKILRLGRCIDVCYIAL 456
G DKL + +Y ++L L + R+K+ E++ RK RLG+ + AL
Sbjct: 38 GVDKLLKISRYAARLA---LAAGPLPPAASARLKSFESSVGLSRKAFRLGKFVQNVN-AL 93
Query: 457 DSMSIEDPFLRLTITVSKLSHSLFLYADHIVWLAKSGFL 573
+ P + L ++ ++ + + VWLAK+G L
Sbjct: 94 RAHPHPPPAVAL---LAYGGEGVYYFLEQFVWLAKAGLL 129
>05_07_0139 -
27968816-27968890,27969065-27969456,27969558-27969640,
27969841-27969933,27970012-27970223,27970604-27970753,
27971195-27971254,27971369-27971496,27972008-27972416,
27973514-27973570
Length = 552
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/53 (26%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = +1
Query: 646 RDLYEILHLLQLHNSKFLRPSDLLNLSVHKF---DLMSTLKHIHVLLLCHRDI 795
+D+Y + L+ + ++ +D L H+F ++ LK+IH + HRD+
Sbjct: 111 KDIYVVFELMDTDLHQVIKANDDLTKEHHQFFLYQMLRALKYIHTANVYHRDL 163
>01_06_0168 +
27165323-27165373,27166659-27167067,27167666-27167793,
27167905-27167964,27169126-27169275,27169358-27169513,
27169643-27169854,27169983-27170084,27170351-27170430,
27170515-27170939
Length = 590
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/53 (26%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = +1
Query: 646 RDLYEILHLLQLHNSKFLRPSDLLNLSVHKF---DLMSTLKHIHVLLLCHRDI 795
+D+Y + L+ + ++ +D L H+F ++ LK+IH + HRD+
Sbjct: 109 KDIYVVFELMDTDLHQVIKANDDLTKEHHQFFLYQMLRALKYIHTANVYHRDL 161
>02_01_0375 + 2712289-2712957
Length = 222
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = +1
Query: 460 SMSIEDPFLRLTITVSKLSHSLFLYADHIVWLAKSGFLKTDSDTWNQTANKFW 618
S ++ PF+R T + + S + F+ DH+ ++ G L W Q+ N +W
Sbjct: 134 SEALRFPFIRNTFSTNWESET-FMKPDHVKYVVYWGRLSKALVWWKQSGNNWW 185
>06_03_1337 +
29434240-29434449,29434504-29434675,29435067-29435152,
29435351-29435759,29435893-29436020,29436094-29436153,
29436501-29436650,29436771-29436926,29437045-29437182,
29437270-29437343,29437752-29437853,29437951-29438191,
29438651-29438668
Length = 647
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +1
Query: 646 RDLYEILHLLQLHNSKFLRPSDLLNLSVHKF---DLMSTLKHIHVLLLCHRDI 795
+D+Y + L++ + +R +D L ++F L+ LK+IH + HRD+
Sbjct: 248 QDIYVVFELMESDLHQVIRANDDLTPEHYQFFLYQLLRALKYIHAANVFHRDL 300
>05_07_0262 +
28769335-28769391,28769732-28769855,28770175-28770266,
28770673-28771078,28772057-28772184,28772273-28772332,
28772814-28772963,28772999-28773061,28773062-28773217,
28773361-28773572,28773698-28773796,28774343-28774512,
28774592-28775040
Length = 721
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/53 (26%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +1
Query: 646 RDLYEILHLLQLHNSKFLRPSDLLNLSVHKF---DLMSTLKHIHVLLLCHRDI 795
+D+Y + L++ + ++ +D L ++F L+ LK+IH + HRD+
Sbjct: 182 KDIYVVFELMESDLHQVIKANDDLTKEHYQFFLYQLLRALKYIHTASVYHRDL 234
>03_02_0413 -
8224494-8224553,8224838-8225004,8225666-8225771,
8226068-8226105,8226177-8226264,8226688-8226741,
8226810-8226918,8227280-8227362,8227444-8227506,
8227585-8227647,8227906-8227977,8228056-8228094,
8228182-8228237,8228316-8228375,8228444-8228558,
8228590-8228810,8228978-8229259,8229390-8229504
Length = 596
Score = 29.1 bits (62), Expect = 4.7
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +1
Query: 517 HSLFLYADHIVWLAKSGFLKTDS--DTWNQTANKFWLLSI 630
H F+++ H + + S FL S D WN NK W+ S+
Sbjct: 178 HVYFVHSYHALPVRNSSFLDALSLVDLWNSDENKEWISSV 217
>01_05_0782 -
25148733-25149166,25149252-25149415,25149636-25149664,
25150049-25150109,25150264-25150475,25150587-25150742,
25150837-25150986,25151486-25151545,25151653-25151780,
25152399-25152807,25153087-25153106,25153916-25154048
Length = 651
Score = 29.1 bits (62), Expect = 4.7
Identities = 14/53 (26%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +1
Query: 646 RDLYEILHLLQLHNSKFLRPSDLLNLSVHKF---DLMSTLKHIHVLLLCHRDI 795
+D+Y + L++ + ++ +D L ++F L+ LK+IH + HRD+
Sbjct: 143 KDIYVVFELMESDLHQVIKANDDLTKEHYQFFLYQLLRALKYIHTANVYHRDL 195
>03_05_0714 -
27076881-27077218,27077332-27077482,27077768-27077903,
27078309-27078457,27079141-27079267,27080033-27080172,
27080264-27080329,27080760-27080901,27081021-27081115,
27081640-27082140
Length = 614
Score = 28.7 bits (61), Expect = 6.2
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 9/84 (10%)
Frame = +1
Query: 580 DSDTWNQTANKFWLLSIIANLARDLYE--ILHLL--QLHNSKFLRPSDLL-----NLSVH 732
D D W+ K W LS+I A + +L +L LH +FLR ++ NL+ H
Sbjct: 222 DKDLWDNEGCKLWDLSVIEPQAELMVNNLVLEVLLANLHVRQFLRAKEICIGIIGNLACH 281
Query: 733 KFDLMSTLKHIHVLLLCHRDIFVD 804
K + H ++ +F+D
Sbjct: 282 KSLANAITSHNGLIATVVDQLFLD 305
>02_05_0640 - 30558523-30559027,30559123-30559252,30559388-30559868,
30560292-30560346,30560537-30560613,30561228-30561315,
30561490-30561593,30562050-30562231,30562347-30563109,
30563195-30563438,30564513-30564658,30565158-30565283,
30565404-30565517,30565595-30565762,30566283-30566528,
30566605-30566767,30566970-30567064,30567274-30567357,
30567769-30568055,30568359-30568572,30568923-30569140,
30569386-30569623,30570312-30571118,30571202-30571301,
30571694-30571737,30571824-30571973
Length = 1942
Score = 28.7 bits (61), Expect = 6.2
Identities = 20/87 (22%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Frame = +1
Query: 478 PFLRLTITVSKLSHSLFLYADHI---VWLAKSGFLKTDSDTWNQTANKFWLLSIIANLAR 648
P T ++ LSHS + ++ W+ +G L+ +S + +F + AN+
Sbjct: 897 PSAEPTYVMTYLSHSFPQHRQYLCAGAWMLMNGHLEINSANLARVLREFSPEEVTANIYT 956
Query: 649 DLYEILHLLQLHNSKFLRPSDLLNLSV 729
+ +LH +QL + + DLL+ ++
Sbjct: 957 MVDVLLHHIQLELQRGHQIQDLLSKAI 983
>02_01_0278 -
1851338-1851412,1851579-1851819,1851946-1852047,
1852291-1852364,1852455-1852592,1852848-1853003,
1853364-1853513,1853808-1853867,1853946-1854073,
1854209-1854617,1855571-1855628,1856435-1856493,
1857478-1857606,1857765-1857774,1858134-1858183,
1858633-1858854
Length = 686
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = +1
Query: 646 RDLYEILHLLQLHNSKFLRPSDLLNLSVHKF---DLMSTLKHIHVLLLCHRDI 795
RD+Y + L++ + + + L+ H+F L+ LK+IH + HRD+
Sbjct: 268 RDIYVVFELMESDLHQVIEANHDLSPEHHRFFLYQLLCALKYIHSANVFHRDL 320
>08_02_1482 -
27428208-27428514,27428605-27428906,27431176-27432228,
27432305-27432421,27432510-27432843,27433064-27433188,
27433408-27433475,27433555-27433636,27433753-27433866,
27433942-27434042,27434145-27434234,27434615-27434819
Length = 965
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3
Query: 414 SEVGQMHRRLLHCFRQHEHRRS 479
SEV + H R + C HEHRRS
Sbjct: 510 SEVSEEHCREVQCIDIHEHRRS 531
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,489,660
Number of Sequences: 37544
Number of extensions: 362902
Number of successful extensions: 812
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 784
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 805
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2362209084
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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