Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_A20
(848 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g47430.1 68416.m05157 peroxisomal biogenesis factor 11 family... 49 5e-06
At1g47750.1 68414.m05310 peroxisomal biogenesis factor 11 family... 42 7e-04
At2g45740.2 68415.m05690 peroxisomal biogenesis factor 11 family... 40 0.002
At2g45740.1 68415.m05689 peroxisomal biogenesis factor 11 family... 40 0.002
At1g01820.1 68414.m00101 peroxisomal biogenesis factor 11 family... 39 0.005
At3g61070.1 68416.m06835 peroxisomal biogenesis factor 11 family... 38 0.006
At1g73670.1 68414.m08531 mitogen-activated protein kinase, putat... 31 1.3
At3g14720.1 68416.m01861 mitogen-activated protein kinase, putat... 29 3.0
At1g59580.2 68414.m06701 mitogen-activated protein kinase, putat... 29 3.0
At1g59580.1 68414.m06700 mitogen-activated protein kinase, putat... 29 3.0
At1g10210.1 68414.m01151 mitogen-activated protein kinase, putat... 29 3.0
At5g19010.1 68418.m02258 mitogen-activated protein kinase, putat... 29 3.9
At4g36450.1 68417.m05177 mitogen-activated protein kinase, putat... 29 3.9
At2g42880.1 68415.m05309 mitogen-activated protein kinase, putat... 29 3.9
At1g18150.2 68414.m02253 mitogen-activated protein kinase, putat... 29 5.2
At1g18150.1 68414.m02252 mitogen-activated protein kinase, putat... 29 5.2
At1g53510.1 68414.m06068 mitogen-activated protein kinase, putat... 28 6.8
At3g18040.2 68416.m02295 mitogen-activated protein kinase, putat... 28 9.0
At3g18040.1 68416.m02294 mitogen-activated protein kinase, putat... 28 9.0
>At3g47430.1 68416.m05157 peroxisomal biogenesis factor 11 family
protein / PEX11 family protein contains Pfam PF05648:
Peroxisomal biogenesis factor 11 (PEX11)
Length = 227
Score = 48.8 bits (111), Expect = 5e-06
Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 1/98 (1%)
Frame = +1
Query: 277 GRDKLARFIQYISKLV-WHQLETRNANKYSIDRIKNLENAFSSFRKILRLGRCIDVCYIA 453
G DKL + QY++KL WH TR + DR K E A RK R GR + + A
Sbjct: 18 GIDKLVKTFQYVAKLACWHVEATRPE---AADRFKKWEVASGLSRKAFRTGRSL-TGFNA 73
Query: 454 LDSMSIEDPFLRLTITVSKLSHSLFLYADHIVWLAKSG 567
L P +R ++ ++ + DH +WL++ G
Sbjct: 74 LRRNPGATPMIRFLAVLANSGEMVYFFFDHFLWLSRIG 111
>At1g47750.1 68414.m05310 peroxisomal biogenesis factor 11 family
protein / PEX11 family protein contains Pfam PF05648:
Peroxisomal biogenesis factor 11 (PEX11)
Length = 248
Score = 41.5 bits (93), Expect = 7e-04
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 3/111 (2%)
Frame = +1
Query: 277 GRDKLARFIQYISKLVWHQL---ETRNANKYSIDRIKNLENAFSSFRKILRLGRCIDVCY 447
G DKL + +Y +K++ ETR+ I R+K+ E++ RK RLG+ +
Sbjct: 30 GVDKLLKISRYATKIILASSLIPETRSI----IPRLKSFESSVGVSRKAFRLGKFVQDIN 85
Query: 448 IALDSMSIEDPFLRLTITVSKLSHSLFLYADHIVWLAKSGFLKTDSDTWNQ 600
AL S + + + ++ L+ + + +WL KSG + W Q
Sbjct: 86 -ALRSSRWDSNHELVLLIIAYGGEGLYYFVEQFIWLTKSGLIDAKHSKWLQ 135
>At2g45740.2 68415.m05690 peroxisomal biogenesis factor 11 family
protein / PEX11 family protein contains Pfam profile
PF05648: Peroxisomal biogenesis factor 11 (PEX11)
Length = 236
Score = 39.9 bits (89), Expect = 0.002
Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 1/111 (0%)
Frame = +1
Query: 247 IIIKVNNQSIGRDKLARFIQYISKLVWHQLETRNANKYSIDRIKNLENAFSSFRKILRLG 426
+++ N++ RDKL R IQY SK + + +N++ + S RK+ RL
Sbjct: 14 LVVMYLNKAEARDKLCRAIQYGSKFL---------SGGQPGTAQNVDKSTSLARKVFRLF 64
Query: 427 RCIDVCYIALDSMSIEDPFLRLTITVSKLSH-SLFLYADHIVWLAKSGFLK 576
+ ++ + + + P + + SK + S FL+ D IVWL +SG K
Sbjct: 65 KFVNDLHGLISPVPKGTPLPLVLLGKSKNALLSTFLFLDQIVWLGRSGIYK 115
>At2g45740.1 68415.m05689 peroxisomal biogenesis factor 11 family
protein / PEX11 family protein contains Pfam profile
PF05648: Peroxisomal biogenesis factor 11 (PEX11)
Length = 236
Score = 39.9 bits (89), Expect = 0.002
Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 1/111 (0%)
Frame = +1
Query: 247 IIIKVNNQSIGRDKLARFIQYISKLVWHQLETRNANKYSIDRIKNLENAFSSFRKILRLG 426
+++ N++ RDKL R IQY SK + + +N++ + S RK+ RL
Sbjct: 14 LVVMYLNKAEARDKLCRAIQYGSKFL---------SGGQPGTAQNVDKSTSLARKVFRLF 64
Query: 427 RCIDVCYIALDSMSIEDPFLRLTITVSKLSH-SLFLYADHIVWLAKSGFLK 576
+ ++ + + + P + + SK + S FL+ D IVWL +SG K
Sbjct: 65 KFVNDLHGLISPVPKGTPLPLVLLGKSKNALLSTFLFLDQIVWLGRSGIYK 115
>At1g01820.1 68414.m00101 peroxisomal biogenesis factor 11 family
protein / PEX11 family protein contains Pfam PF05648:
Peroxisomal biogenesis factor 11 (PEX11)
Length = 235
Score = 38.7 bits (86), Expect = 0.005
Identities = 29/113 (25%), Positives = 56/113 (49%), Gaps = 1/113 (0%)
Frame = +1
Query: 241 MDIIIKVNNQSIGRDKLARFIQYISKLVWHQLETRNANKYSIDRIKNLENAFSSFRKILR 420
+ +++ N++ RDK+ R IQY SK + + + ++D+ +L RK+ R
Sbjct: 11 LGLVVVYLNKAEARDKICRAIQYGSKFL---SDGQPGTAQNVDKNTSLA------RKVFR 61
Query: 421 LGRCIDVCYIALDSMSIEDPFLRLTITVSKLSH-SLFLYADHIVWLAKSGFLK 576
L + ++ + + + P + + SK + S FL+ D IVWL ++G K
Sbjct: 62 LFKFVNDLHALISPVPKGTPLPLVLLGKSKNALLSTFLFLDQIVWLGRTGIYK 114
>At3g61070.1 68416.m06835 peroxisomal biogenesis factor 11 family
protein / PEX11 family protein contains Pfam PF05648:
Peroxisomal biogenesis factor 11 (PEX11)
Length = 231
Score = 38.3 bits (85), Expect = 0.006
Identities = 41/155 (26%), Positives = 71/155 (45%), Gaps = 3/155 (1%)
Frame = +1
Query: 208 TLLHKVHDEIAMDIIIKVNNQSIGRDKLARFIQYISKLVWHQLETRNANKYSIDRIKNLE 387
T L E+A+ I+ N++ RDK+ R IQY SK + + ++D+ +L
Sbjct: 2 TTLDLTRAELAL--IVLYLNKAEARDKICRAIQYGSKFL---SGGQPGTAQTVDKNTSLA 56
Query: 388 NAFSSFRKILRLGRCIDVCYIALDSMSIEDPFLRLTITVSKLSH-SLFLYADHIVWLAKS 564
RK+ RL + ++ + + + P + + SK + S FL+ D IVWL +S
Sbjct: 57 ------RKVFRLFKFVNDFHGLISPVPKGTPLPLVLLGKSKNALLSTFLFLDQIVWLGRS 110
Query: 565 GFLKTDSDT--WNQTANKFWLLSIIANLARDLYEI 663
G K T + + WL S + A ++ E+
Sbjct: 111 GIYKNKERTELLGRISLFCWLGSSVCTSAVEIGEL 145
>At1g73670.1 68414.m08531 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK15) similar to mitogen-activated
protein kinase GB:A56042 [Dictyostelium discoideum];
mitogen-activated protein kinase (MAPK)(AtMPK15),
PMID:12119167; contains Pfam profile: PF00069 Eukaryotic
protein kinase domain
Length = 431
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +1
Query: 646 RDLYEILHLLQLHNSKFLRPSDLLNLSVHKF---DLMSTLKHIHVLLLCHRDI 795
RD+Y + L++ + ++ +D L H+F L+ LK++H + HRD+
Sbjct: 165 RDVYVVFELMESDLHQVIKANDDLTPEHHQFFLYQLLRGLKYVHAANVFHRDL 217
>At3g14720.1 68416.m01861 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK19) identical to mitogen-activated
protein kinase (MAPK)(AtMPK19), PMID:12119167;
Length = 586
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/53 (24%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +1
Query: 646 RDLYEILHLLQLHNSKFLRPSDLLNLSVHKF---DLMSTLKHIHVLLLCHRDI 795
+D+Y + L++ + ++ +D L H+F ++ LK++H + HRD+
Sbjct: 88 KDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYMHTANVYHRDL 140
>At1g59580.2 68414.m06701 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK2) identical to mitogen-activated
protein kinase homolog 2 (AtMPK2)[Arabidopsis thaliana]
SWISS-PROT:Q39022; PMID:12119167
Length = 376
Score = 29.5 bits (63), Expect = 3.0
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Frame = +1
Query: 646 RDLYEILHLLQLHNSKFLRPSDLLN---LSVHKFDLMSTLKHIHVLLLCHRDIFV-DTLX 813
+D+Y + L+ + ++ S +L+ F L+ LK+IH + HRD+ + L
Sbjct: 107 KDVYLVYELMDTDLHQIIKSSQVLSNDHCQYFLFQLLRGLKYIHSANILHRDLKPGNLLV 166
Query: 814 NA-CDLFI 834
NA CDL I
Sbjct: 167 NANCDLKI 174
>At1g59580.1 68414.m06700 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK2) identical to mitogen-activated
protein kinase homolog 2 (AtMPK2)[Arabidopsis thaliana]
SWISS-PROT:Q39022; PMID:12119167
Length = 376
Score = 29.5 bits (63), Expect = 3.0
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Frame = +1
Query: 646 RDLYEILHLLQLHNSKFLRPSDLLN---LSVHKFDLMSTLKHIHVLLLCHRDIFV-DTLX 813
+D+Y + L+ + ++ S +L+ F L+ LK+IH + HRD+ + L
Sbjct: 107 KDVYLVYELMDTDLHQIIKSSQVLSNDHCQYFLFQLLRGLKYIHSANILHRDLKPGNLLV 166
Query: 814 NA-CDLFI 834
NA CDL I
Sbjct: 167 NANCDLKI 174
>At1g10210.1 68414.m01151 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK1) identical to mitogen-activated
protein kinase homolog 1 (AtMPK1)[Arabidopsis thaliana]
SWISS-PROT:Q39021; PMID:12119167
Length = 370
Score = 29.5 bits (63), Expect = 3.0
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Frame = +1
Query: 646 RDLYEILHLLQLHNSKFLRPSDLLN---LSVHKFDLMSTLKHIHVLLLCHRDIFV-DTLX 813
+D+Y + L+ + ++ S +L+ F L+ LK+IH + HRD+ + L
Sbjct: 107 KDVYLVYELMDTDLHQIIKSSQVLSNDHCQYFLFQLLRGLKYIHSANILHRDLKPGNLLV 166
Query: 814 NA-CDLFI 834
NA CDL I
Sbjct: 167 NANCDLKI 174
>At5g19010.1 68418.m02258 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK16) mitogen-activated protein
kinase (MAPK)(AtMPK16), PMID:12119167; similar to
ATMPK9, Arabidopsis thaliana, EMBL:AB038694
Length = 567
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +1
Query: 646 RDLYEILHLLQLHNSKFLRPSDLLNLSVHKF---DLMSTLKHIHVLLLCHRDI 795
RD+Y + L++ + ++ +D L ++F L+ LK+IH + HRD+
Sbjct: 100 RDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDL 152
>At4g36450.1 68417.m05177 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK14) mitogen-activated protein
kinase (MAPK)(AtMPK14), PMID:12119167
Length = 361
Score = 29.1 bits (62), Expect = 3.9
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Frame = +1
Query: 646 RDLYEILHLLQLHNSKFLRPSDLLNLSVHK---FDLMSTLKHIHVLLLCHRDIFV-DTLX 813
RD+Y + L+ ++ ++ S L+ K F L+ LK++H + HRD+ + L
Sbjct: 107 RDVYLVYELMDSDLNQIIKSSQSLSDDHCKYFLFQLLRGLKYLHSANILHRDLKPGNLLV 166
Query: 814 NA-CDLFI 834
NA CDL I
Sbjct: 167 NANCDLKI 174
>At2g42880.1 68415.m05309 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK20) mitogen-activated protein
kinase (MAPK)(AtMPK20), PMID:12119167
Length = 606
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/53 (26%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +1
Query: 646 RDLYEILHLLQLHNSKFLRPSDLLNLSVHKF---DLMSTLKHIHVLLLCHRDI 795
+D+Y + L++ + ++ +D L ++F L+ LK+IH + HRD+
Sbjct: 100 KDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDL 152
>At1g18150.2 68414.m02253 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK8) identical to ATMPK8 [Arabidopsis
thaliana] gi|7106542|dbj|BAA92222; mitogen-activated
protein kinase (MAPK), PMID:12119167; similar to
mitogen-activated protein kinase GI:5815410 from (Oryza
sativa)
Length = 589
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/53 (26%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +1
Query: 646 RDLYEILHLLQLHNSKFLRPSDLLNLSVHKF---DLMSTLKHIHVLLLCHRDI 795
RD+Y + L++ + ++ +D L ++F L+ LK++H + HRD+
Sbjct: 179 RDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYVHAANVFHRDL 231
>At1g18150.1 68414.m02252 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK8) identical to ATMPK8 [Arabidopsis
thaliana] gi|7106542|dbj|BAA92222; mitogen-activated
protein kinase (MAPK), PMID:12119167; similar to
mitogen-activated protein kinase GI:5815410 from (Oryza
sativa)
Length = 589
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/53 (26%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +1
Query: 646 RDLYEILHLLQLHNSKFLRPSDLLNLSVHKF---DLMSTLKHIHVLLLCHRDI 795
RD+Y + L++ + ++ +D L ++F L+ LK++H + HRD+
Sbjct: 179 RDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYVHAANVFHRDL 231
>At1g53510.1 68414.m06068 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK18) mitogen-activated protein
kinase (MAPK)(AtMPK18), PMID:12119167
Length = 603
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/53 (24%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = +1
Query: 646 RDLYEILHLLQLHNSKFLRPSDLLNLSVHKF---DLMSTLKHIHVLLLCHRDI 795
+D+Y + L++ + ++ +D L H+F ++ LK +H + HRD+
Sbjct: 88 KDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKFMHTANVYHRDL 140
>At3g18040.2 68416.m02295 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK9) identical to ATMPK9 [Arabidopsis
thaliana] gi|7106544|dbj|BAA92223; mitogen-activated
protein kinase (MAPK), PMID:12119167; similar to blast
and wounding induced mitogen-activated protein kinase
(BWMK1) GB:AAD52659 [Oryza sativa]; contains Pfam
profile: PF00069 Eukaryotic protein kinase domain
Length = 422
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = +1
Query: 646 RDLYEILHLLQLHNSKFLRPSDLLNLSVHKF---DLMSTLKHIHVLLLCHRDI 795
RD+Y + L++ + ++ +D L ++F L+ LK IH + HRD+
Sbjct: 10 RDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKFIHTANVFHRDL 62
>At3g18040.1 68416.m02294 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK9) identical to ATMPK9 [Arabidopsis
thaliana] gi|7106544|dbj|BAA92223; mitogen-activated
protein kinase (MAPK), PMID:12119167; similar to blast
and wounding induced mitogen-activated protein kinase
(BWMK1) GB:AAD52659 [Oryza sativa]; contains Pfam
profile: PF00069 Eukaryotic protein kinase domain
Length = 510
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = +1
Query: 646 RDLYEILHLLQLHNSKFLRPSDLLNLSVHKF---DLMSTLKHIHVLLLCHRDI 795
RD+Y + L++ + ++ +D L ++F L+ LK IH + HRD+
Sbjct: 98 RDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKFIHTANVFHRDL 150
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,502,895
Number of Sequences: 28952
Number of extensions: 320536
Number of successful extensions: 798
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 775
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 791
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1970388800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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