BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fcaL-P02_F_A17 (732 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_3407| Best HMM Match : TPX2 (HMM E-Value=2.9e-09) 38 0.006 SB_23388| Best HMM Match : ParBc (HMM E-Value=0.3) 35 0.078 SB_28981| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.10 SB_46755| Best HMM Match : zf-C2H2 (HMM E-Value=1.09301e-43) 33 0.24 SB_5831| Best HMM Match : TolA (HMM E-Value=0.0037) 32 0.42 SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029) 32 0.55 SB_41| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.96 SB_42146| Best HMM Match : GYF (HMM E-Value=5.7e-15) 31 1.3 SB_59580| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7 SB_11898| Best HMM Match : DMP1 (HMM E-Value=1.6) 30 1.7 SB_30472| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2 SB_49860| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9 SB_26233| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9 SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17) 29 2.9 SB_13201| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9 SB_46756| Best HMM Match : zf-C2H2 (HMM E-Value=4.60046e-42) 29 3.9 SB_46344| Best HMM Match : ig (HMM E-Value=0.0082) 29 5.1 SB_23345| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1 SB_49663| Best HMM Match : TolA (HMM E-Value=0.059) 29 5.1 SB_42720| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1 SB_15709| Best HMM Match : CAP_GLY (HMM E-Value=0) 29 5.1 SB_53860| Best HMM Match : fn3 (HMM E-Value=3.6e-07) 28 6.8 SB_47823| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8 SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8 SB_30292| Best HMM Match : fn3 (HMM E-Value=1.2e-12) 28 6.8 SB_2413| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8 SB_48387| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8 SB_47629| Best HMM Match : Vicilin_N (HMM E-Value=1.1) 28 6.8 SB_22747| Best HMM Match : 7tm_1 (HMM E-Value=3.1e-06) 28 9.0 SB_53672| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0 SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0) 28 9.0 >SB_3407| Best HMM Match : TPX2 (HMM E-Value=2.9e-09) Length = 787 Score = 38.3 bits (85), Expect = 0.006 Identities = 23/61 (37%), Positives = 36/61 (59%) Frame = +1 Query: 475 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEK 654 + ++ L + EKK Q ML+ K A+K P F ++ +EN G A+ N +++LEEEK Sbjct: 607 QRNKEALAKKEKKIQEMLEEEKKATKFEP-FNLE--TENRGSVKAEKWLNSVQQELEEEK 663 Query: 655 K 657 K Sbjct: 664 K 664 >SB_23388| Best HMM Match : ParBc (HMM E-Value=0.3) Length = 1168 Score = 34.7 bits (76), Expect = 0.078 Identities = 17/61 (27%), Positives = 36/61 (59%) Frame = +1 Query: 469 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 648 ++EEK++RL+ E+ + ++ +A K+ASK+ + T + +S N ++ K ++E Sbjct: 427 EVEEKKRRLQRYERLQSSLNEAYKEASKSSVDGT-RDESRNEEITQTSCNETSGKTPIKE 485 Query: 649 E 651 E Sbjct: 486 E 486 >SB_28981| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 655 Score = 34.3 bits (75), Expect = 0.10 Identities = 15/25 (60%), Positives = 21/25 (84%) Frame = +1 Query: 472 IEEKRQRLEEAEKKRQAMLQAMKDA 546 +EE+R+RLE EK+RQA QAM++A Sbjct: 319 LEEERKRLENLEKERQAAQQAMQEA 343 >SB_46755| Best HMM Match : zf-C2H2 (HMM E-Value=1.09301e-43) Length = 1806 Score = 33.1 bits (72), Expect = 0.24 Identities = 24/83 (28%), Positives = 43/83 (51%) Frame = +1 Query: 475 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEK 654 EE+RQ+ EEA K+R+ L A K++SK+ +K E G + + ++ TK + E Sbjct: 1344 EERRQKREEARKRREEKL-AKKESSKSSNK---RKSKERSGNPSFKRIKSTTKGRETEVT 1399 Query: 655 KISLSIRIKPLTIEGLSVDKLRQ 723 K S + + +S+ + R+ Sbjct: 1400 KDSPVVESSDKSCSDMSIKRSRK 1422 >SB_5831| Best HMM Match : TolA (HMM E-Value=0.0037) Length = 703 Score = 32.3 bits (70), Expect = 0.42 Identities = 21/59 (35%), Positives = 33/59 (55%) Frame = +1 Query: 472 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 648 +EE+R+R EEAEKKR+ + ++ + + KK E L QLER K +++ E Sbjct: 252 MEEERKRKEEAEKKREEEERKRREEEEAAQKW---KKEEL--LRQQQLEREKEEQERAE 305 >SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029) Length = 1866 Score = 31.9 bits (69), Expect = 0.55 Identities = 25/84 (29%), Positives = 41/84 (48%) Frame = +1 Query: 475 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEK 654 ++KR+R E+ K+RQ L+ K+ + I+K+ Q ER + KE+ E++K Sbjct: 914 KDKREREEKERKRRQQQLE--KEKKEKEKKLLIEKEKRE---KEKQKERLREKEEKEKQK 968 Query: 655 KISLSIRIKPLTIEGLSVDKLRQK 726 + R K L DKL +K Sbjct: 969 EAE---RAKKEKERLLQEDKLHEK 989 >SB_41| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 306 Score = 31.1 bits (67), Expect = 0.96 Identities = 17/43 (39%), Positives = 19/43 (44%) Frame = -3 Query: 730 GPSVGVCRRRDPRWSAA*CGWTGRSSSPLPAAPWSCCAPAGHC 602 G V C R D A CG TG+ S P +CCA A C Sbjct: 173 GQDVNRCHR-DAAIVAKGCGCTGQYSQTCTQGPGACCATAESC 214 >SB_42146| Best HMM Match : GYF (HMM E-Value=5.7e-15) Length = 924 Score = 30.7 bits (66), Expect = 1.3 Identities = 16/63 (25%), Positives = 34/63 (53%) Frame = +1 Query: 475 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEK 654 EE+R++ EEAE++R+ + K + +QK+ + Q ++ K Q EE++ Sbjct: 636 EERRRQQEEAERQRREQEEVFKQQEQQRQQLELQKRQQ-----EQQRQQELQKRQQEEKQ 690 Query: 655 KIS 663 +++ Sbjct: 691 RMA 693 >SB_59580| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 999 Score = 30.3 bits (65), Expect = 1.7 Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 4/66 (6%) Frame = +1 Query: 472 IEEKRQRLE----EAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQ 639 ++EK++RL+ E E+K KDA K ++ +K E A+++ K ++Q Sbjct: 811 LKEKQERLKAKKKEEEEKELEKRSKTKDAKKYFESWKSKKDEELKEAHRAKMQELKKQKQ 870 Query: 640 LEEEKK 657 EEE+K Sbjct: 871 KEEEEK 876 >SB_11898| Best HMM Match : DMP1 (HMM E-Value=1.6) Length = 1705 Score = 30.3 bits (65), Expect = 1.7 Identities = 18/56 (32%), Positives = 29/56 (51%) Frame = +1 Query: 502 AEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKKISLS 669 A KK + ++ +D ++TG QK+S+ + A E+ K QL E +K LS Sbjct: 1428 AGKKCDSQVRYDEDLNETGRKKHKQKRSKIIDIDFANSEKEKVVTQLSESRKRKLS 1483 >SB_30472| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 482 Score = 29.9 bits (64), Expect = 2.2 Identities = 21/74 (28%), Positives = 36/74 (48%) Frame = +1 Query: 475 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEK 654 +EK + + E KKR M + ++ K +QK+ E L N LE + + E+E+ Sbjct: 119 KEKAEEVNERAKKRALMYKYHEEKLKEDKRLNLQKQQEE--LRNKILEDVQALQ--EDER 174 Query: 655 KISLSIRIKPLTIE 696 +L +R K +E Sbjct: 175 NKTLQVRNKQREVE 188 >SB_49860| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 362 Score = 29.5 bits (63), Expect = 2.9 Identities = 18/61 (29%), Positives = 30/61 (49%) Frame = +1 Query: 475 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEK 654 E++R++ EE E+ Q Q + ++ Q+K E+ L L+R K EEE+ Sbjct: 218 EKRRKKKEEQERLEQQRRQREQRIAEKRKRLEEQRKVESLHLLKELLKRVADKRAEEEEE 277 Query: 655 K 657 K Sbjct: 278 K 278 >SB_26233| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 463 Score = 29.5 bits (63), Expect = 2.9 Identities = 16/62 (25%), Positives = 32/62 (51%) Frame = +1 Query: 475 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEK 654 EE+ ++ EEAE+K+Q L+ + + Q+K E + + + KE+ E++ Sbjct: 277 EEEEKQKEEAERKKQEKLEKLAKKKEELKERKRQEKLEQKAKKKEKERQEREKEKEREKE 336 Query: 655 KI 660 +I Sbjct: 337 RI 338 >SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17) Length = 1249 Score = 29.5 bits (63), Expect = 2.9 Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 4/65 (6%) Frame = +1 Query: 475 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQ----LERNKTKEQL 642 E++RQR E+ ++ + +Q +KD + I ++ E Q L+R K + Sbjct: 440 EDERQRAEDERQRVKHEMQRLKDERRRAEEDEIARQEEELRRLQEQREKELKRYKELQMA 499 Query: 643 EEEKK 657 EEEK+ Sbjct: 500 EEEKR 504 >SB_13201| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 383 Score = 29.5 bits (63), Expect = 2.9 Identities = 20/73 (27%), Positives = 39/73 (53%) Frame = +1 Query: 469 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 648 DI K++ EE +KKR+ + ++ + +KKS + +AQ+E + + QLE Sbjct: 252 DIGIKQKNPEECQKKRRKRRNLVSPEAEVNAKRSQEKKSVSL---SAQIEPD-LRNQLER 307 Query: 649 EKKISLSIRIKPL 687 E++ L+ + + L Sbjct: 308 ERRNDLNTKFQKL 320 >SB_46756| Best HMM Match : zf-C2H2 (HMM E-Value=4.60046e-42) Length = 1078 Score = 29.1 bits (62), Expect = 3.9 Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%) Frame = +1 Query: 475 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNA-QLERNKTKEQLEEE 651 EE+RQ+ EEA K+R+ L + T + ++K G S A + +K E +E Sbjct: 537 EERRQKREEARKRREEKLAKKGPTTSTSSSRKRRRKFNRNGRSAAIKAAASKLSENEDET 596 Query: 652 KK 657 K Sbjct: 597 TK 598 >SB_46344| Best HMM Match : ig (HMM E-Value=0.0082) Length = 181 Score = 28.7 bits (61), Expect = 5.1 Identities = 10/21 (47%), Positives = 13/21 (61%) Frame = -2 Query: 86 LGTGSWTGSTATLECGVRGXP 24 + T SW G +L+C VRG P Sbjct: 1 MNTSSWDGKVLSLQCKVRGLP 21 >SB_23345| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 903 Score = 28.7 bits (61), Expect = 5.1 Identities = 28/149 (18%), Positives = 58/149 (38%), Gaps = 1/149 (0%) Frame = +1 Query: 214 KQEGEGDPEFIKRQDQKRSDLDEQLKEYINEWRKQRAXXXXXXXXXXXXQAKRKVSXXXX 393 ++E + E KR++++R +E+ K+ E RKQR + +++ Sbjct: 449 EEEERREEEERKREEEERKQREEEEKKREEEERKQREEEERKQKEKEEEKKRKEEERKHK 508 Query: 394 XXXXXXXXXXXXXXXXXXXXXXXXXDIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTI 573 + ++R+R E EKK + ++ K T+ Sbjct: 509 EEEEKKTEESYDDSWRGRRARRKAEEERKERERRERLEKKHSEPEKKTEEPPKVVVEPTV 568 Query: 574 QKKSENFGLSNAQLERNKTKEQ-LEEEKK 657 +K+ ++E KT+E+ L++E K Sbjct: 569 EKEPA------VKVESEKTEEEPLDDEAK 591 >SB_49663| Best HMM Match : TolA (HMM E-Value=0.059) Length = 591 Score = 28.7 bits (61), Expect = 5.1 Identities = 15/55 (27%), Positives = 30/55 (54%) Frame = +1 Query: 511 KRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKKISLSIR 675 +++A +++K+ + TIQ+ E+F +LE K KEQ E+ S +++ Sbjct: 214 QQKAQQESLKETLQEQEKETIQQLEEDFKAQLNELEVEKAKEQTALEEMKSFTVK 268 >SB_42720| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2391 Score = 28.7 bits (61), Expect = 5.1 Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 2/28 (7%) Frame = +3 Query: 525 APGHE--RCQQDRTQLHHPKEERKLRFE 602 APGH+ RC QD +L+ K ERK R E Sbjct: 1105 APGHQPLRCLQDVEELYLSKVERKDRLE 1132 >SB_15709| Best HMM Match : CAP_GLY (HMM E-Value=0) Length = 729 Score = 28.7 bits (61), Expect = 5.1 Identities = 12/25 (48%), Positives = 18/25 (72%) Frame = +1 Query: 469 DIEEKRQRLEEAEKKRQAMLQAMKD 543 D+EEK + LEEA+ + +A+ MKD Sbjct: 522 DLEEKAKELEEAKSENEAISGKMKD 546 >SB_53860| Best HMM Match : fn3 (HMM E-Value=3.6e-07) Length = 288 Score = 28.3 bits (60), Expect = 6.8 Identities = 10/25 (40%), Positives = 14/25 (56%) Frame = -2 Query: 98 VTQSLGTGSWTGSTATLECGVRGXP 24 V+ + T SW G +L+C RG P Sbjct: 2 VSSTTNTSSWDGKVLSLQCKARGVP 26 >SB_47823| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 671 Score = 28.3 bits (60), Expect = 6.8 Identities = 14/57 (24%), Positives = 29/57 (50%) Frame = +1 Query: 475 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLE 645 EEKR EEA K+++++ + + + K T +K+ E ++ N+ ++ E Sbjct: 459 EEKRTESEEAPKRKKSLKRRLSFSRKNKAKKTEEKQDEEGEAREGTMDDNEVSQKPE 515 >SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1103 Score = 28.3 bits (60), Expect = 6.8 Identities = 15/56 (26%), Positives = 30/56 (53%) Frame = +1 Query: 490 RLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKK 657 R + E++RQA + ++DA + I+++ E A LER + +E+ E ++ Sbjct: 574 RRQRTERQRQAKAREVRDAREKERQDRIRRERERIARERA-LERERERERERERER 628 >SB_30292| Best HMM Match : fn3 (HMM E-Value=1.2e-12) Length = 519 Score = 28.3 bits (60), Expect = 6.8 Identities = 10/27 (37%), Positives = 14/27 (51%) Frame = -2 Query: 104 KSVTQSLGTGSWTGSTATLECGVRGXP 24 K ++ T SW G +L+C RG P Sbjct: 368 KDGASTMNTSSWDGKVLSLQCKARGLP 394 >SB_2413| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 493 Score = 28.3 bits (60), Expect = 6.8 Identities = 12/40 (30%), Positives = 25/40 (62%) Frame = +1 Query: 205 PAPKQEGEGDPEFIKRQDQKRSDLDEQLKEYINEWRKQRA 324 PA ++EGEG+P+ +R+ Q + ++Q K + +K ++ Sbjct: 56 PANEEEGEGEPKPKRRKAQPSAPKEKQTKSRKRDKKKDKS 95 >SB_48387| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 941 Score = 28.3 bits (60), Expect = 6.8 Identities = 14/57 (24%), Positives = 31/57 (54%) Frame = +1 Query: 496 EEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKKISL 666 EE +++Q Q + + K I +++ + +LE++ +K+Q+EE+K + L Sbjct: 344 EEQAQRKQLEKQLVDSSKKFEKENQILMEADEL-IKTLKLEKSSSKQQIEEQKNVCL 399 >SB_47629| Best HMM Match : Vicilin_N (HMM E-Value=1.1) Length = 599 Score = 28.3 bits (60), Expect = 6.8 Identities = 20/80 (25%), Positives = 38/80 (47%) Frame = +1 Query: 478 EKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKK 657 ++ +R +E EKK + + K+ K ++K E + + + KE+ + EKK Sbjct: 30 KRDEREQEREKKERRKKERKKERKKERKK---ERKKEKKKERKKERKEERKKERKKAEKK 86 Query: 658 ISLSIRIKPLTIEGLSVDKL 717 + S + EGL+V K+ Sbjct: 87 FTDSNESVLVWTEGLNVSKV 106 >SB_22747| Best HMM Match : 7tm_1 (HMM E-Value=3.1e-06) Length = 337 Score = 27.9 bits (59), Expect = 9.0 Identities = 12/21 (57%), Positives = 14/21 (66%) Frame = -3 Query: 406 RGAFLLRHEKPCAWPASL*GV 344 RGA L R+E PC W A L G+ Sbjct: 69 RGAALQRNEPPCMWIAILNGI 89 >SB_53672| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 675 Score = 27.9 bits (59), Expect = 9.0 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = +1 Query: 559 PNFTIQKKSENFGLSNAQLERNKTKEQLEEE 651 P T + EN GLSN L ++KTK E+ Sbjct: 498 PTPTSSQTQENIGLSNGTLTQDKTKPGCSED 528 >SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0) Length = 442 Score = 27.9 bits (59), Expect = 9.0 Identities = 16/68 (23%), Positives = 36/68 (52%) Frame = +1 Query: 478 EKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKK 657 ++++RLE +KK Q L+ + K +K+ E +LE+ + KE+ + +K+ Sbjct: 339 KEKERLEAKQKKEQERLEKQAEKEKKEKERLEKKQRE----EKDRLEKKEKKEEEKRKKE 394 Query: 658 ISLSIRIK 681 ++ +I+ Sbjct: 395 EEINAKIE 402 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.314 0.130 0.362 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,652,406 Number of Sequences: 59808 Number of extensions: 234923 Number of successful extensions: 919 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 838 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 912 length of database: 16,821,457 effective HSP length: 80 effective length of database: 12,036,817 effective search space used: 1962001171 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 42 (22.0 bits)
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