Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_A17
(732 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039039-6|AAO25996.1| 308|Caenorhabditis elegans Troponin t pr... 44 8e-05
AF039039-5|AAB94176.2| 347|Caenorhabditis elegans Troponin t pr... 44 8e-05
AC084161-2|AAK29732.3| 782|Caenorhabditis elegans Hypothetical ... 35 0.068
Z81115-5|CAB03295.1| 482|Caenorhabditis elegans Hypothetical pr... 32 0.48
Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical pr... 31 0.64
Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical pr... 31 0.64
Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical pr... 31 0.64
U12965-3|AAZ32811.1| 980|Caenorhabditis elegans Hypothetical pr... 31 0.64
AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein. 31 0.64
Z83108-6|CAB05512.1| 833|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z50070-13|CAA90402.1| 833|Caenorhabditis elegans Hypothetical p... 31 1.1
Z81066-5|CAB02969.1| 777|Caenorhabditis elegans Hypothetical pr... 30 1.5
AL021175-9|CAA15969.2| 444|Caenorhabditis elegans Hypothetical ... 30 1.5
Z79694-8|CAB01965.1| 872|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z75531-10|CAJ85759.1| 500|Caenorhabditis elegans Hypothetical p... 29 2.6
Z72506-9|CAA96622.1| 872|Caenorhabditis elegans Hypothetical pr... 29 2.6
X08068-1|CAA30857.1| 882|Caenorhabditis elegans paramyosin prot... 29 2.6
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos... 29 2.6
AL110478-6|CAE17957.2| 952|Caenorhabditis elegans Hypothetical ... 29 2.6
AF039713-6|AAB96723.1| 829|Caenorhabditis elegans Hypothetical ... 29 2.6
U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical pr... 29 3.4
AL110471-2|CAB63306.1| 479|Caenorhabditis elegans Hypothetical ... 29 3.4
AF067216-1|AAC17524.1| 301|Caenorhabditis elegans Hypothetical ... 29 3.4
AF025458-4|AAB70975.4| 374|Caenorhabditis elegans Hypothetical ... 29 3.4
Z50794-5|CAA90660.1| 1139|Caenorhabditis elegans Hypothetical pr... 29 4.5
U80441-1|AAB37651.1| 647|Caenorhabditis elegans Hypothetical pr... 29 4.5
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 29 4.5
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 29 4.5
AL117195-12|CAB60765.1| 425|Caenorhabditis elegans Hypothetical... 29 4.5
AF170122-1|AAD47840.1| 1139|Caenorhabditis elegans liprin-alpha ... 29 4.5
AL117195-7|CAB55028.1| 158|Caenorhabditis elegans Hypothetical ... 28 5.9
AC024753-9|AAF60460.1| 139|Caenorhabditis elegans Hypothetical ... 28 5.9
>AF039039-6|AAO25996.1| 308|Caenorhabditis elegans Troponin t
protein 4, isoform b protein.
Length = 308
Score = 44.4 bits (100), Expect = 8e-05
Identities = 38/155 (24%), Positives = 63/155 (40%), Gaps = 7/155 (4%)
Frame = +1
Query: 226 EGDPEFIKRQDQKRSDLDEQLKEYINEWRKQRAXXXXXXXXXXXXQAKRKVSXXXXXXXX 405
EG+ + + + +D +L++Y R +R QA+RK++
Sbjct: 46 EGEKAMLAAKRRHENDEQAKLEDYEKARRSEREKEEEELEKLKEKQAQRKLAREQEEREA 105
Query: 406 XXXXXXXXXXXXXXXXXXXXXDIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKS 585
EEK+++ EE KK Q M+ + G NF IQKK
Sbjct: 106 AERKRLDEERRQKEEQERRARAEEEKKRKEEEKLKKAQ-MMGGGFPGQQGGRNFVIQKKE 164
Query: 586 ENFGLSN-------AQLERNKTKEQLEEEKKISLS 669
E+ G+ + A+ E TKEQ EE K ++++
Sbjct: 165 ESAGVGDRFGNIVQAKQEMGMTKEQQEEAKSVAMA 199
>AF039039-5|AAB94176.2| 347|Caenorhabditis elegans Troponin t
protein 4, isoform a protein.
Length = 347
Score = 44.4 bits (100), Expect = 8e-05
Identities = 38/155 (24%), Positives = 63/155 (40%), Gaps = 7/155 (4%)
Frame = +1
Query: 226 EGDPEFIKRQDQKRSDLDEQLKEYINEWRKQRAXXXXXXXXXXXXQAKRKVSXXXXXXXX 405
EG+ + + + +D +L++Y R +R QA+RK++
Sbjct: 46 EGEKAMLAAKRRHENDEQAKLEDYEKARRSEREKEEEELEKLKEKQAQRKLAREQEEREA 105
Query: 406 XXXXXXXXXXXXXXXXXXXXXDIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKS 585
EEK+++ EE KK Q M+ + G NF IQKK
Sbjct: 106 AERKRLDEERRQKEEQERRARAEEEKKRKEEEKLKKAQ-MMGGGFPGQQGGRNFVIQKKE 164
Query: 586 ENFGLSN-------AQLERNKTKEQLEEEKKISLS 669
E+ G+ + A+ E TKEQ EE K ++++
Sbjct: 165 ESAGVGDRFGNIVQAKQEMGMTKEQQEEAKSVAMA 199
>AC084161-2|AAK29732.3| 782|Caenorhabditis elegans Hypothetical
protein Y92H12A.4 protein.
Length = 782
Score = 34.7 bits (76), Expect = 0.068
Identities = 22/87 (25%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Frame = +1
Query: 472 IEEKRQRLEEAEKKRQAMLQAMKDASKTG-PNFTIQKKSENFGLSNAQLERNKTKEQLEE 648
I K++ +E + + + A+ + T P+F+ +K S + + ++E+ K K+ +EE
Sbjct: 497 IRPKKKSTDEEKAIKSSSEPALSEQKSTEKPSFSTEKLSSD--SATTKIEKEKLKKAIEE 554
Query: 649 EKKISLSIRIKPLTIE-GLSVDKLRQK 726
+++ L++ IK L E G + KL+ +
Sbjct: 555 QEEQELNVLIKQLQGEIGTKIAKLKDQ 581
>Z81115-5|CAB03295.1| 482|Caenorhabditis elegans Hypothetical
protein T05D4.5 protein.
Length = 482
Score = 31.9 bits (69), Expect = 0.48
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +1
Query: 469 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLER-NKTKEQLE 645
D EEK+++ E +KK+ A + KDA +K ++ G + + K K+ E
Sbjct: 411 DAEEKKKKDAEEKKKKDAEDEKKKDAGDEKKKDAEDEKKKDAGDEKKKKDAGEKKKKDAE 470
Query: 646 EEKKIS 663
E+KK++
Sbjct: 471 EKKKVA 476
Score = 31.1 bits (67), Expect = 0.84
Identities = 19/63 (30%), Positives = 30/63 (47%)
Frame = +1
Query: 469 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 648
D EEK+++ E EKK+ A + KDA +K + + + + K+ EE
Sbjct: 419 DAEEKKKKDAEDEKKKDAGDEKKKDAEDEKKKDAGDEKKKKDAGEKKKKDAEEKKKVAEE 478
Query: 649 EKK 657
EKK
Sbjct: 479 EKK 481
>Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical
protein T10G3.5b protein.
Length = 1203
Score = 31.5 bits (68), Expect = 0.64
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Frame = +1
Query: 472 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQ-KKSENFGLSNAQLERNKTKEQLE- 645
IE+ Q+LEEAEK+ + + +AS + + T+ K+SE L E N E+L+
Sbjct: 648 IEDAVQKLEEAEKRAREL-----EASVSSRDTTVSTKESELSELKGKLTESNSFIEELKV 702
Query: 646 EEKKISLSIRIKPLTIEGLSVDKLRQK 726
+ +K+S I K +E L + +R K
Sbjct: 703 QVEKVSNEISEKQQEVENLMAE-MRDK 728
>Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical
protein T10G3.5a protein.
Length = 1205
Score = 31.5 bits (68), Expect = 0.64
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Frame = +1
Query: 472 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQ-KKSENFGLSNAQLERNKTKEQLE- 645
IE+ Q+LEEAEK+ + + +AS + + T+ K+SE L E N E+L+
Sbjct: 650 IEDAVQKLEEAEKRAREL-----EASVSSRDTTVSTKESELSELKGKLTESNSFIEELKV 704
Query: 646 EEKKISLSIRIKPLTIEGLSVDKLRQK 726
+ +K+S I K +E L + +R K
Sbjct: 705 QVEKVSNEISEKQQEVENLMAE-MRDK 730
>Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical protein
F35G12.8 protein.
Length = 1549
Score = 31.5 bits (68), Expect = 0.64
Identities = 19/67 (28%), Positives = 33/67 (49%)
Frame = +1
Query: 472 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEE 651
+E+K++ +EE EKKR + + A IQ K + Q R++ KE L++
Sbjct: 869 LEDKQKIVEELEKKRDEL--GEEAAKVKARQAEIQSKLDGIFKELVQCHRDEAKESLQKR 926
Query: 652 KKISLSI 672
+K+ I
Sbjct: 927 QKLEKDI 933
>U12965-3|AAZ32811.1| 980|Caenorhabditis elegans Hypothetical
protein F23F12.8 protein.
Length = 980
Score = 31.5 bits (68), Expect = 0.64
Identities = 21/82 (25%), Positives = 41/82 (50%)
Frame = +1
Query: 478 EKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKK 657
E+R++LEE+E RQA L +++ E L +LE K + + +++
Sbjct: 337 ERRRKLEESETARQAELDRQATIYAEQERMAMERNRE---LERIRLEEKKRENERVRQEE 393
Query: 658 ISLSIRIKPLTIEGLSVDKLRQ 723
I++ I K +E L +++ R+
Sbjct: 394 IAMEIS-KIRELERLQLERQRK 414
>AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein.
Length = 1205
Score = 31.5 bits (68), Expect = 0.64
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Frame = +1
Query: 472 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQ-KKSENFGLSNAQLERNKTKEQLE- 645
IE+ Q+LEEAEK+ + + +AS + + T+ K+SE L E N E+L+
Sbjct: 650 IEDAVQKLEEAEKRAREL-----EASVSSRDTTVSTKESELSELKGKLTESNSFIEELKV 704
Query: 646 EEKKISLSIRIKPLTIEGLSVDKLRQK 726
+ +K+S I K +E L + +R K
Sbjct: 705 QVEKVSNEISEKQQEVENLMAE-MRDK 730
>Z83108-6|CAB05512.1| 833|Caenorhabditis elegans Hypothetical
protein F43G6.9 protein.
Length = 833
Score = 30.7 bits (66), Expect = 1.1
Identities = 26/94 (27%), Positives = 51/94 (54%), Gaps = 10/94 (10%)
Frame = +1
Query: 478 EKRQRLEEAEKKRQAMLQAMKDASKTG-PNFTIQKKSENFGLSNAQLER--NKTKEQLEE 648
E+++R++ E K+ + K A+ G P+ + + AQ+E N+TK+ +E
Sbjct: 536 ERQERIDRGEDKKLRQTLSDKFATSLGLPSKSSTHNPRHVLDMKAQVESVDNQTKKLSDE 595
Query: 649 EKKISLS--IRIKPLTIEG-----LSVDKLRQKA 729
E+KI+++ +R L +EG + VD+LR+ +
Sbjct: 596 ERKIAVAKKLRTMLLRLEGALNILMEVDELRRSS 629
>Z50070-13|CAA90402.1| 833|Caenorhabditis elegans Hypothetical
protein F43G6.9 protein.
Length = 833
Score = 30.7 bits (66), Expect = 1.1
Identities = 26/94 (27%), Positives = 51/94 (54%), Gaps = 10/94 (10%)
Frame = +1
Query: 478 EKRQRLEEAEKKRQAMLQAMKDASKTG-PNFTIQKKSENFGLSNAQLER--NKTKEQLEE 648
E+++R++ E K+ + K A+ G P+ + + AQ+E N+TK+ +E
Sbjct: 536 ERQERIDRGEDKKLRQTLSDKFATSLGLPSKSSTHNPRHVLDMKAQVESVDNQTKKLSDE 595
Query: 649 EKKISLS--IRIKPLTIEG-----LSVDKLRQKA 729
E+KI+++ +R L +EG + VD+LR+ +
Sbjct: 596 ERKIAVAKKLRTMLLRLEGALNILMEVDELRRSS 629
>Z81066-5|CAB02969.1| 777|Caenorhabditis elegans Hypothetical
protein F17B5.1a protein.
Length = 777
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/69 (30%), Positives = 37/69 (53%)
Frame = +1
Query: 475 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEK 654
EE+ R++E E+K++ +L+ ++A K + K+E E K K++LEEE+
Sbjct: 531 EEEEARIKEEEEKQRKILE--EEARKKQEEEEARLKAEE---ELKIYEEEKRKKELEEER 585
Query: 655 KISLSIRIK 681
K + IK
Sbjct: 586 KKKEELEIK 594
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +1
Query: 481 KRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKK 657
K+Q EEA K + L+ ++ + +KK E + + E K K+ LEEEKK
Sbjct: 554 KKQEEEEARLKAEEELKIYEEEKRKKELEEERKKKEELEIKR-KAEEEKKKKALEEEKK 611
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/61 (27%), Positives = 31/61 (50%)
Frame = +1
Query: 475 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEK 654
E++R+ LEE +K+Q +A A + + +K+ + + E + K + EEEK
Sbjct: 542 EKQRKILEEEARKKQEEEEARLKAEEELKIYEEEKRKKELEEERKKKEELEIKRKAEEEK 601
Query: 655 K 657
K
Sbjct: 602 K 602
>AL021175-9|CAA15969.2| 444|Caenorhabditis elegans Hypothetical
protein Y6E2A.8 protein.
Length = 444
Score = 30.3 bits (65), Expect = 1.5
Identities = 20/65 (30%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Frame = +1
Query: 481 KRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKS---ENFGLSNAQLERNKT--KEQLE 645
KR+ ++ AEK ++A L+ K++SK+ +KK ++ ++A+ K+ KEQ +
Sbjct: 323 KRETMKRAEKMKEAELKKKKESSKSKEEDKNKKKEVKIKSAPKTSAKKSAKKSAKKEQKK 382
Query: 646 EEKKI 660
EKK+
Sbjct: 383 SEKKV 387
>Z79694-8|CAB01965.1| 872|Caenorhabditis elegans Hypothetical
protein F07A5.7 protein.
Length = 872
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/87 (21%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Frame = +1
Query: 472 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEE 651
+EE R+RLE+AE++R + + + E+ S+A+ + N ++ +
Sbjct: 239 LEEARRRLEDAERERSQLQSQLHQVQLELDSVRTALDEESIARSDAEHKLNLANTEITQW 298
Query: 652 K-KISLSIRIKPLTIEGLSVDKLRQKA 729
K K + + +E L L+++A
Sbjct: 299 KSKFDAEVALHHEEVEDLRKKMLQKQA 325
>Z75531-10|CAJ85759.1| 500|Caenorhabditis elegans Hypothetical
protein C54D10.12 protein.
Length = 500
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
Frame = +1
Query: 475 EEKRQRLEEAEKKRQAMLQAMKDAS------KTGPNFTIQKKSENFGLSNAQLERNKTKE 636
EEK Q++ E E+K Q +L K+ + + + I++K E N Q R K E
Sbjct: 208 EEKLQQIREKERKLQELLLRQKEEAEEEALRRLANDSEIEQKLEKIRYENEQQARQKDNE 267
Query: 637 Q 639
Q
Sbjct: 268 Q 268
>Z72506-9|CAA96622.1| 872|Caenorhabditis elegans Hypothetical
protein F07A5.7 protein.
Length = 872
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/87 (21%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Frame = +1
Query: 472 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEE 651
+EE R+RLE+AE++R + + + E+ S+A+ + N ++ +
Sbjct: 239 LEEARRRLEDAERERSQLQSQLHQVQLELDSVRTALDEESIARSDAEHKLNLANTEITQW 298
Query: 652 K-KISLSIRIKPLTIEGLSVDKLRQKA 729
K K + + +E L L+++A
Sbjct: 299 KSKFDAEVALHHEEVEDLRKKMLQKQA 325
>X08068-1|CAA30857.1| 882|Caenorhabditis elegans paramyosin
protein.
Length = 882
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/87 (21%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Frame = +1
Query: 472 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEE 651
+EE R+RLE+AE++R + + + E+ S+A+ + N ++ +
Sbjct: 255 LEEARRRLEDAERERSQLQSQLHQVQLELDSVRTALDEESIARSDAEHKLNLANTEITQW 314
Query: 652 K-KISLSIRIKPLTIEGLSVDKLRQKA 729
K K + + +E L L+++A
Sbjct: 315 KSKFDAEVALHHEEVEDLRKKMLQKQA 341
>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
protein 1 protein.
Length = 1963
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/62 (20%), Positives = 36/62 (58%)
Frame = +1
Query: 469 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 648
D+E +++LEE+E ++ +LQ+ K + + +++ ++ +++ + K + Q+ E
Sbjct: 1397 DVEHLQKQLEESEVAKERILQSKKKIQQELEDSSMELENVRASHRDSEKRQKKFESQMAE 1456
Query: 649 EK 654
E+
Sbjct: 1457 ER 1458
>AL110478-6|CAE17957.2| 952|Caenorhabditis elegans Hypothetical
protein Y26D4A.14 protein.
Length = 952
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/84 (21%), Positives = 41/84 (48%)
Frame = +1
Query: 475 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEK 654
+ +Q+LEE EK+ Q +L+ ++ + Q + +L+R + +Q +E+
Sbjct: 203 QRHKQQLEEYEKRNQEILRREEEIKQQNQEREKQINDDFEKRKQEKLQREEEMKQQNQER 262
Query: 655 KISLSIRIKPLTIEGLSVDKLRQK 726
+ ++ + +E L +KL +K
Sbjct: 263 EKLIADDFEKRKLEKLQREKLFEK 286
>AF039713-6|AAB96723.1| 829|Caenorhabditis elegans Hypothetical
protein F57B10.6 protein.
Length = 829
Score = 29.5 bits (63), Expect = 2.6
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 6/84 (7%)
Frame = +1
Query: 481 KRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENF------GLSNAQLERNKTKEQL 642
KRQ LE +KRQ +K++ K G + KKS+ GL + L N KE +
Sbjct: 81 KRQVLEARRQKRQNDDDILKNSKKMG-KLKVLKKSQKIREIASGGLDDVAL-ANAIKEVI 138
Query: 643 EEEKKISLSIRIKPLTIEGLSVDK 714
KK+ L+ K + +DK
Sbjct: 139 SPSKKVILNDIYKDIPSTSTYLDK 162
>U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical protein
F58G4.1 protein.
Length = 1974
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/68 (23%), Positives = 35/68 (51%)
Frame = +1
Query: 472 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEE 651
+E+ +L + +Q +++ +T T +++S + +SN QLE + +E LEEE
Sbjct: 1301 LEDAEAQLCALNRIKQQQHSQLEELKRTLDQETRERQSLHSQVSNYQLECEQFRESLEEE 1360
Query: 652 KKISLSIR 675
+ ++
Sbjct: 1361 QDAKTDVQ 1368
>AL110471-2|CAB63306.1| 479|Caenorhabditis elegans Hypothetical
protein T06D10.2 protein.
Length = 479
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/84 (20%), Positives = 41/84 (48%)
Frame = +1
Query: 475 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEK 654
++KR+++EE EK+R + +++ +K+ + +L++ +++ +EEK
Sbjct: 94 KQKREKMEEREKQRIERERILEEKRLEKDKLAEEKRLDKEKKEKERLDKKLEEDKKKEEK 153
Query: 655 KISLSIRIKPLTIEGLSVDKLRQK 726
+ + K E + D+ R K
Sbjct: 154 RKEAEEKKKKDEEEKMKKDEERNK 177
>AF067216-1|AAC17524.1| 301|Caenorhabditis elegans Hypothetical
protein C35E7.9 protein.
Length = 301
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/61 (24%), Positives = 31/61 (50%)
Frame = +1
Query: 475 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEK 654
E+K ++ E+ ++K + KD K+G +K+ + + + K +E+ E+EK
Sbjct: 121 EKKEEKKEDEKEKGDDKKEDEKDDKKSGSKDAEKKEEKKEEEKKEEKKEEKKEEKKEDEK 180
Query: 655 K 657
K
Sbjct: 181 K 181
>AF025458-4|AAB70975.4| 374|Caenorhabditis elegans Hypothetical
protein C01B12.2 protein.
Length = 374
Score = 29.1 bits (62), Expect = 3.4
Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 6/82 (7%)
Frame = +1
Query: 478 EKRQRLEEAEKKRQAMLQAMKDASKTGP----NFTIQKKSENFGLSNAQLERNKTKEQLE 645
E ++R EEAE+K Q A+K +T N TIQ K+ L +E + L
Sbjct: 220 ENQKRQEEAERKLQEKQNAIKCLMETDSVTFWNQTIQSKTSTVVLDRISMELGSLAQNLI 279
Query: 646 EEKKISLSIR--IKPLTIEGLS 705
+ + S I+ L + GLS
Sbjct: 280 SGRDFAASSSKIIQVLQVLGLS 301
>Z50794-5|CAA90660.1| 1139|Caenorhabditis elegans Hypothetical
protein F59F5.6 protein.
Length = 1139
Score = 28.7 bits (61), Expect = 4.5
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Frame = +1
Query: 478 EKRQRLEEAEKKRQAMLQAMKDASKTGPNFT--IQKKSENFGLSNAQLERNKTKEQLEEE 651
+K + L E + Q ++A+ A + + IQ+ N +A+LER +E++ EE
Sbjct: 373 KKAESLPSVEAELQQRMEALTAAEQKSVSAEERIQRLDRNIQELSAELERAVQRERMNEE 432
Query: 652 KKISLSIRIKPLTIEGLSVDKLR 720
LS + L E S D+L+
Sbjct: 433 HSQRLSSTVDKLLSE--SNDRLQ 453
>U80441-1|AAB37651.1| 647|Caenorhabditis elegans Hypothetical
protein F27C1.6 protein.
Length = 647
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +1
Query: 469 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLER 621
D E+ ++ ++E EK + L S GP T +K+ +NF + + R
Sbjct: 514 DFEDMKEGVKEKEKVKDVDLNLAGWGSWVGPGMTEKKRRQNFVIKAKEKRR 564
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 28.7 bits (61), Expect = 4.5
Identities = 19/87 (21%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Frame = +1
Query: 478 EKRQRLEEAEKKRQAMLQAMKD---ASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 648
+K +E A+K+++ Q D ASK ++ + ++ A+++ K +++LEE
Sbjct: 13495 KKAAEVEAAKKQKEKDEQLKLDTEAASKKAAAEKLELEKQSHIKKAAEVDAVKKQKELEE 13554
Query: 649 EKKISLSIRIKPLTIEGLSVDKLRQKA 729
++++ K E L +++ ++KA
Sbjct: 13555 KQRLESEAATKKADAEKLKLEEQKKKA 13581
Score = 27.9 bits (59), Expect = 7.8
Identities = 19/58 (32%), Positives = 26/58 (44%)
Frame = +1
Query: 481 KRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEK 654
K+Q +A+K L+A A K +I K + FG E + T EQ EEK
Sbjct: 11626 KKQDENDAKKSVSKNLKA--GAKKDSDTLSITSKKDKFGKRQDSREASATVEQQGEEK 11681
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 28.7 bits (61), Expect = 4.5
Identities = 19/87 (21%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Frame = +1
Query: 478 EKRQRLEEAEKKRQAMLQAMKD---ASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 648
+K +E A+K+++ Q D ASK ++ + ++ A+++ K +++LEE
Sbjct: 13495 KKAAEVEAAKKQKEKDEQLKLDTEAASKKAAAEKLELEKQSHIKKAAEVDAVKKQKELEE 13554
Query: 649 EKKISLSIRIKPLTIEGLSVDKLRQKA 729
++++ K E L +++ ++KA
Sbjct: 13555 KQRLESEAATKKADAEKLKLEEQKKKA 13581
Score = 27.9 bits (59), Expect = 7.8
Identities = 19/58 (32%), Positives = 26/58 (44%)
Frame = +1
Query: 481 KRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEK 654
K+Q +A+K L+A A K +I K + FG E + T EQ EEK
Sbjct: 11626 KKQDENDAKKSVSKNLKA--GAKKDSDTLSITSKKDKFGKRQDSREASATVEQQGEEK 11681
>AL117195-12|CAB60765.1| 425|Caenorhabditis elegans Hypothetical
protein Y57A10A.19 protein.
Length = 425
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/54 (22%), Positives = 31/54 (57%)
Frame = +1
Query: 475 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKE 636
+EK+Q+L+E EK+R+ + Q ++ ++ +E+ +++ ++ K +E
Sbjct: 216 KEKKQKLKEMEKRREKLRQKERELLAVSDKVKKEEPAESSDEEDSRKDQRKPRE 269
>AF170122-1|AAD47840.1| 1139|Caenorhabditis elegans liprin-alpha
homolog SYD-2 protein.
Length = 1139
Score = 28.7 bits (61), Expect = 4.5
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Frame = +1
Query: 478 EKRQRLEEAEKKRQAMLQAMKDASKTGPNFT--IQKKSENFGLSNAQLERNKTKEQLEEE 651
+K + L E + Q ++A+ A + + IQ+ N +A+LER +E++ EE
Sbjct: 373 KKAESLPSVEAELQQRMEALTAAEQKSVSAEERIQRLDRNIQELSAELERAVQRERMNEE 432
Query: 652 KKISLSIRIKPLTIEGLSVDKLR 720
LS + L E S D+L+
Sbjct: 433 HSQRLSSTVDKLLSE--SNDRLQ 453
>AL117195-7|CAB55028.1| 158|Caenorhabditis elegans Hypothetical
protein Y57A10A.9 protein.
Length = 158
Score = 28.3 bits (60), Expect = 5.9
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 8/72 (11%)
Frame = +1
Query: 478 EKRQRLEEAEKKRQAMLQAMKDASKTGPNFT--------IQKKSENFGLSNAQLERNKTK 633
+K +RL E ++ + Q M++ASK F +QK++ENF + Q + +
Sbjct: 84 QKLRRLAAQELEQDVVEQKMREASKNKVLFANVLNIFADLQKEAENFSKTTKQSSTSPSS 143
Query: 634 EQLEEEKKISLS 669
EE S S
Sbjct: 144 SSSSEESSASSS 155
>AC024753-9|AAF60460.1| 139|Caenorhabditis elegans Hypothetical
protein Y23H5B.2 protein.
Length = 139
Score = 28.3 bits (60), Expect = 5.9
Identities = 21/78 (26%), Positives = 34/78 (43%)
Frame = +1
Query: 481 KRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKKI 660
KRQ+ + +KK ++ A +K+G + KS +Q KEQ E+KK+
Sbjct: 65 KRQQNSKRQKKIKSNSAAPAPPAKSG----VPAKSAEKAKEGSQRSARLKKEQKSEKKKV 120
Query: 661 SLSIRIKPLTIEGLSVDK 714
+ +R E L K
Sbjct: 121 CVDLRSTVYIYEALLFQK 138
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.314 0.130 0.362
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,244,975
Number of Sequences: 27780
Number of extensions: 161431
Number of successful extensions: 687
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 628
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 682
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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