Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_A15
         (818 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2FYC5 Cluster: Putative uncharacterized protein; n=1; ...    34   3.8  
UniRef50_A0BMJ6 Cluster: Chromosome undetermined scaffold_116, w...    33   6.6  
UniRef50_A7GFR4 Cluster: Putative uncharacterized protein; n=1; ...    33   8.7  

>UniRef50_A2FYC5 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 334

 Score = 34.3 bits (75), Expect = 3.8
 Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
 Frame = +3

Query: 90  FLKLINNNTINTYCFTKLN-VDFISTKRSLNVYIKKLRYFFP**IVSLYNLC*NINPVVF 266
           F  + N  T+N  C   LN   F + +  LNVYIK++RYF    I+S +N C ++  V  
Sbjct: 97  FSTIKNLKTVNLNCSVYLNDYSFYNCQNLLNVYIKEIRYFG---ILS-FNKCPSLKNVTI 152

Query: 267 LE 272
           ++
Sbjct: 153 ID 154


>UniRef50_A0BMJ6 Cluster: Chromosome undetermined scaffold_116,
           whole genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_116,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 1674

 Score = 33.5 bits (73), Expect = 6.6
 Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
 Frame = -2

Query: 223 TIYHGKKYRNFLMYTFRLLF----VEIKSTFNLVKQ*VFIVLLLISFKKSSVS*KNLPSI 56
           TI    K+  FL  +  LLF    +E+ S+  L+K  V I+L   SFK+     K L ++
Sbjct: 721 TIEENYKHIRFLEISNTLLFQEQLIELFSSIKLIKNLVVIILDYQSFKEKDE--KVLDTL 778

Query: 55  Y-CEMCFRPINNYVIHR 8
           Y C  CFR + ++ + +
Sbjct: 779 YSCLNCFRNVKHFSVRK 795


>UniRef50_A7GFR4 Cluster: Putative uncharacterized protein; n=1;
           Clostridium botulinum F str. Langeland|Rep: Putative
           uncharacterized protein - Clostridium botulinum (strain
           Langeland / NCTC 10281 / Type F)
          Length = 145

 Score = 33.1 bits (72), Expect = 8.7
 Identities = 14/39 (35%), Positives = 26/39 (66%)
 Frame = -2

Query: 802 LIQYKRHLYHMLIKQLYILFS*KEDGILLIIFGLC*MVY 686
           LI++KR+LY  +I  L I+ + K  G ++ IFG+  +++
Sbjct: 34  LIRFKRYLYSFIILGLIIVLAAKSKGPIIAIFGMLFLIF 72


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 756,266,810
Number of Sequences: 1657284
Number of extensions: 15164786
Number of successful extensions: 29030
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 27932
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29027
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 71200899835
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)