Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_A15
         (818 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF078787-3|AAC26951.1|  335|Caenorhabditis elegans Hypothetical ...    30   2.3  
AL117202-30|CAO82060.1|  449|Caenorhabditis elegans Hypothetical...    29   4.0  
AL117202-29|CAO82059.1|  842|Caenorhabditis elegans Hypothetical...    29   4.0  
AL117202-15|CAC42376.1|  627|Caenorhabditis elegans Hypothetical...    29   4.0  
AL117202-14|CAB57894.2|  766|Caenorhabditis elegans Hypothetical...    29   4.0  
Z82272-6|CAB05222.1| 1431|Caenorhabditis elegans Hypothetical pr...    29   5.3  
U55365-8|AAA98573.2|  383|Caenorhabditis elegans Hypothetical pr...    28   9.2  
U00036-6|AAK29853.1|  377|Caenorhabditis elegans Hypothetical pr...    28   9.2  
U00036-5|AAT92064.1|  446|Caenorhabditis elegans Hypothetical pr...    28   9.2  

>AF078787-3|AAC26951.1|  335|Caenorhabditis elegans Hypothetical
           protein T17A3.4 protein.
          Length = 335

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = +2

Query: 506 NGLVNKVPQRLP*IVLYNVLFVCLLTKSPKKRKCSFFSH 622
           N  + KVP +L  +++ N+  +C+    P K+ C F  H
Sbjct: 208 NCYLYKVPMKLEDLLVSNIFLMCIDKPCPLKQLCLFLKH 246


>AL117202-30|CAO82060.1|  449|Caenorhabditis elegans Hypothetical
           protein Y47D3A.17d protein.
          Length = 449

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 18/46 (39%), Positives = 26/46 (56%)
 Frame = -2

Query: 547 NLW*SLRYFIHKTVSKPPNYLILNFINNVSVLLQVRRFIEYVPLPE 410
           NLW  ++  I K +SK P  + +NF   +SVL +V   +EY  L E
Sbjct: 65  NLWSIMKNCIGKELSKIP--MPVNFSEPISVLQRVTEDLEYANLLE 108


>AL117202-29|CAO82059.1|  842|Caenorhabditis elegans Hypothetical
           protein Y47D3A.17c protein.
          Length = 842

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 18/46 (39%), Positives = 26/46 (56%)
 Frame = -2

Query: 547 NLW*SLRYFIHKTVSKPPNYLILNFINNVSVLLQVRRFIEYVPLPE 410
           NLW  ++  I K +SK P  + +NF   +SVL +V   +EY  L E
Sbjct: 458 NLWSIMKNCIGKELSKIP--MPVNFSEPISVLQRVTEDLEYANLLE 501


>AL117202-15|CAC42376.1|  627|Caenorhabditis elegans Hypothetical
           protein Y47D3A.17b protein.
          Length = 627

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 18/46 (39%), Positives = 26/46 (56%)
 Frame = -2

Query: 547 NLW*SLRYFIHKTVSKPPNYLILNFINNVSVLLQVRRFIEYVPLPE 410
           NLW  ++  I K +SK P  + +NF   +SVL +V   +EY  L E
Sbjct: 243 NLWSIMKNCIGKELSKIP--MPVNFSEPISVLQRVTEDLEYANLLE 286


>AL117202-14|CAB57894.2|  766|Caenorhabditis elegans Hypothetical
           protein Y47D3A.17a protein.
          Length = 766

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 18/46 (39%), Positives = 26/46 (56%)
 Frame = -2

Query: 547 NLW*SLRYFIHKTVSKPPNYLILNFINNVSVLLQVRRFIEYVPLPE 410
           NLW  ++  I K +SK P  + +NF   +SVL +V   +EY  L E
Sbjct: 382 NLWSIMKNCIGKELSKIP--MPVNFSEPISVLQRVTEDLEYANLLE 425


>Z82272-6|CAB05222.1| 1431|Caenorhabditis elegans Hypothetical protein
            F55G11.9 protein.
          Length = 1431

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 17/58 (29%), Positives = 29/58 (50%)
 Frame = +2

Query: 491  VWRF*NGLVNKVPQRLP*IVLYNVLFVCLLTKSPKKRKCSFFSHRRFKSLETVNLSNL 664
            +W F NGLV ++   +    L+ +L +C +T  P +R C    HRR +  + +    L
Sbjct: 1051 LWDF-NGLVIELAFIIAAAFLFTLL-LCCITMKPIRRACFLCCHRRSRLRQRMKYKGL 1106


>U55365-8|AAA98573.2|  383|Caenorhabditis elegans Hypothetical
           protein C12D5.2 protein.
          Length = 383

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 14/41 (34%), Positives = 18/41 (43%)
 Frame = -3

Query: 354 CHQPWH*EHYSPTYTDVGCSWFITHVLLPKIRQDLYSNKDC 232
           C++P H  H+    T  GC  F   + L K     Y N DC
Sbjct: 24  CNRPAH-GHHCDVATCKGCKTFFRRMYLLKSELRCYINSDC 63


>U00036-6|AAK29853.1|  377|Caenorhabditis elegans Hypothetical
           protein R151.2a protein.
          Length = 377

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = +3

Query: 387 QMPT*EVFSGNGTYSINLRTCNKTETLLMKLRIK*FGGFET 509
           +MP  +VFSG+    ++ R C + +  + K  +K F   ET
Sbjct: 58  RMPNIKVFSGSSHPDLSTRICERLQLEVSKASLKKFSNKET 98


>U00036-5|AAT92064.1|  446|Caenorhabditis elegans Hypothetical
           protein R151.2d protein.
          Length = 446

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = +3

Query: 387 QMPT*EVFSGNGTYSINLRTCNKTETLLMKLRIK*FGGFET 509
           +MP  +VFSG+    ++ R C + +  + K  +K F   ET
Sbjct: 127 RMPNIKVFSGSSHPDLSTRICERLQLEVSKASLKKFSNKET 167


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,056,725
Number of Sequences: 27780
Number of extensions: 386633
Number of successful extensions: 759
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 744
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 759
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2019417216
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)