Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_A13
(829 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g19730.1 68414.m02465 thioredoxin H-type 4 (TRX-H-4) (GREN) i... 71 7e-13
At1g69880.1 68414.m08042 thioredoxin, putative similar to SP|Q38... 69 3e-12
At3g17880.1 68416.m02278 tetratricoredoxin (TDX) identical to te... 68 9e-12
At1g43560.1 68414.m05000 thioredoxin family protein contains Pfa... 68 9e-12
At5g39950.1 68418.m04844 thioredoxin H-type 2 (TRX-H-2) (Gif2) i... 66 2e-11
At3g08710.1 68416.m01012 thioredoxin family protein similar to t... 64 1e-10
At3g51030.1 68416.m05587 thioredoxin H-type 1 (TRX-H-1) identica... 64 1e-10
At1g76760.1 68414.m08933 thioredoxin family protein similar to t... 64 1e-10
At5g16400.1 68418.m01917 thioredoxin, putative similar to SP|P29... 62 3e-10
At1g59730.1 68414.m06725 thioredoxin, putative similar to SP|Q38... 62 6e-10
At1g45145.1 68414.m05175 thioredoxin H-type 5 (TRX-H-5) (TOUL) i... 61 8e-10
At3g15360.1 68416.m01948 thioredoxin M-type 4, chloroplast (TRX-... 61 1e-09
At3g02730.1 68416.m00265 thioredoxin, putative similar to SP|P29... 61 1e-09
At5g42980.1 68418.m05242 thioredoxin H-type 3 (TRX-H-3) (GIF1) i... 58 7e-09
At1g03680.1 68414.m00347 thioredoxin M-type 1, chloroplast (TRX-... 58 7e-09
At4g03520.1 68417.m00480 thioredoxin M-type 2, chloroplast (TRX-... 54 9e-08
At2g15570.1 68415.m01783 thioredoxin M-type 3, chloroplast (TRX-... 53 2e-07
At1g50320.1 68414.m05641 thioredoxin x nearly identical to thior... 51 8e-07
At4g26160.1 68417.m03765 thioredoxin family protein low similari... 50 2e-06
At2g33270.1 68415.m04078 thioredoxin family protein contains Pfa... 48 6e-06
At2g40790.1 68415.m05032 thioredoxin family protein contains Pfa... 48 1e-05
At2g35010.1 68415.m04295 thioredoxin family protein similar to S... 47 2e-05
At4g29670.2 68417.m04227 thioredoxin family protein contains Pfa... 46 4e-05
At4g29670.1 68417.m04226 thioredoxin family protein contains Pfa... 46 4e-05
At1g31020.1 68414.m03798 thioredoxin o (TRXO2) similar to thiore... 45 7e-05
At1g08570.1 68414.m00950 thioredoxin family protein contains Pfa... 45 7e-05
At5g61440.1 68418.m07709 thioredoxin family protein low similari... 44 2e-04
At3g56420.1 68416.m06275 thioredoxin family protein similar to t... 44 2e-04
At3g06730.1 68416.m00798 thioredoxin family protein contains Pfa... 43 2e-04
At1g11530.1 68414.m01324 thioredoxin family protein similar to t... 42 4e-04
At1g77510.1 68414.m09026 protein disulfide isomerase, putative s... 42 7e-04
At2g32920.1 68415.m04036 thioredoxin family protein similar to S... 41 0.001
At1g52990.1 68414.m05997 thioredoxin family protein similar to S... 41 0.001
At1g21750.2 68414.m02723 protein disulfide isomerase, putative s... 40 0.002
At1g21750.1 68414.m02722 protein disulfide isomerase, putative s... 40 0.002
At1g04980.1 68414.m00497 thioredoxin family protein similar to S... 40 0.003
At1g35620.1 68414.m04425 thioredoxin family protein similar to S... 39 0.005
At5g04260.1 68418.m00417 thioredoxin family protein low similari... 38 0.008
At5g60640.2 68418.m07611 thioredoxin family protein similar to p... 38 0.011
At5g60640.1 68418.m07610 thioredoxin family protein similar to p... 38 0.011
At5g06690.1 68418.m00756 thioredoxin family protein low similiar... 38 0.011
At4g04950.1 68417.m00719 thioredoxin family protein similar to P... 38 0.011
At1g76080.1 68414.m08835 thioredoxin family protein low similari... 37 0.014
At3g54960.1 68416.m06094 thioredoxin family protein similar to p... 37 0.019
At3g53220.1 68416.m05864 thioredoxin family protein low similari... 37 0.019
At4g32580.1 68417.m04638 thioredoxin family protein contains Pfa... 36 0.033
At2g47470.2 68415.m05924 thioredoxin family protein similar to p... 36 0.043
At2g47470.1 68415.m05925 thioredoxin family protein similar to p... 36 0.043
At1g60420.1 68414.m06802 DC1 domain-containing protein contains ... 34 0.10
At1g07700.3 68414.m00829 thioredoxin family protein low similari... 33 0.18
At1g07700.1 68414.m00828 thioredoxin family protein low similari... 33 0.18
At1g07960.3 68414.m00867 thioredoxin family protein low similari... 32 0.40
At1g07960.2 68414.m00866 thioredoxin family protein low similari... 32 0.40
At1g07960.1 68414.m00865 thioredoxin family protein low similari... 32 0.40
At3g03860.1 68416.m00398 expressed protein 32 0.53
At2g41680.1 68415.m05149 thioredoxin reductase, putative / NADPH... 32 0.53
At1g07700.2 68414.m00827 thioredoxin family protein low similari... 29 3.8
At4g31240.2 68417.m04435 expressed protein 28 8.7
At4g31240.1 68417.m04434 expressed protein 28 8.7
>At1g19730.1 68414.m02465 thioredoxin H-type 4 (TRX-H-4) (GREN)
identical to SP|Q39239 Thioredoxin H-type 4 (TRX-H-4)
{Arabidopsis thaliana}
Length = 119
Score = 71.3 bits (167), Expect = 7e-13
Identities = 32/91 (35%), Positives = 50/91 (54%)
Frame = +3
Query: 69 HIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXX 248
H D ++ A+ +KL+VIDF A+WC PC+MI P +++A +
Sbjct: 12 HTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAIFFKVDVDEL 71
Query: 249 XXXASEYNINSMPTFVFVKNGKKLDEFSGAN 341
A E+ + +MPTFVF+K G+ +D+ GAN
Sbjct: 72 QSVAKEFGVEAMPTFVFIKAGEVVDKLVGAN 102
>At1g69880.1 68414.m08042 thioredoxin, putative similar to SP|Q38879
Thioredoxin H-type 2 (TRX-H-2) {Arabidopsis thaliana};
contains Pfam profile: PF00085 Thioredoxin
Length = 148
Score = 69.3 bits (162), Expect = 3e-12
Identities = 38/108 (35%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Frame = +3
Query: 30 EIRAFV*KPKMSIHIKDSDDLKTRLAEAGD--KLVVIDFMATWCGPCKMIGPKLDEIAAE 203
EI F + IK+ + K+RL D KL+VI+F A WCGPCK + PKL+E+AA+
Sbjct: 28 EIYPFKVNSPCIVEIKNMNQWKSRLNALKDTNKLLVIEFTAKWCGPCKTLEPKLEELAAK 87
Query: 204 MXXXXXXXXXXXXXXXXXASEYNINSMPTFVFVKNGKKLDEFSGANVD 347
E+N++++P VF+K G+++D G VD
Sbjct: 88 YTDVEFVKIDVDVLMSVW-MEFNLSTLPAIVFMKRGREVDMVVGVKVD 134
>At3g17880.1 68416.m02278 tetratricoredoxin (TDX) identical to
tetratricoredoxin [Arabidopsis thaliana] GI:18041544;
similar to SP|Q42443 Thioredoxin H-type (TRX-H) (Phloem
sap 13 kDa protein-1) {Oryza sativa}; contains Pfam
profile: PF00085 Thioredoxin
Length = 380
Score = 67.7 bits (158), Expect = 9e-12
Identities = 31/94 (32%), Positives = 53/94 (56%)
Frame = +3
Query: 60 MSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXX 239
+SIH + KT+ A+ +L+++ F ATWCGPC+ + P +A +
Sbjct: 273 ISIHSTSELEAKTKAAKKASRLLILYFTATWCGPCRYMSPLYSNLATQHSRVVFLKVDID 332
Query: 240 XXXXXXASEYNINSMPTFVFVKNGKKLDEFSGAN 341
AS +NI+S+PTF F+++GK++D+ GA+
Sbjct: 333 KANDVAAS-WNISSVPTFCFIRDGKEVDKVVGAD 365
>At1g43560.1 68414.m05000 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin; similar to thioredoxin
GI:142153 from [Synechococcus PCC6301]
Length = 167
Score = 67.7 bits (158), Expect = 9e-12
Identities = 29/79 (36%), Positives = 45/79 (56%)
Frame = +3
Query: 102 LAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINS 281
L + DK V++DF ATWCGPC+++ P L+E++ + A++Y I +
Sbjct: 71 LLQNSDKPVLVDFYATWCGPCQLMVPILNEVSETLKDIIAVVKIDTEKYPSLANKYQIEA 130
Query: 282 MPTFVFVKNGKKLDEFSGA 338
+PTF+ K+GK D F GA
Sbjct: 131 LPTFILFKDGKLWDRFEGA 149
>At5g39950.1 68418.m04844 thioredoxin H-type 2 (TRX-H-2) (Gif2)
identical to SP|Q38879 Thioredoxin H-type 2 (TRX-H-2)
{Arabidopsis thaliana}; identical to cDNA (Gif2) mRNA
for thioredoxin GI:992963
Length = 133
Score = 66.5 bits (155), Expect = 2e-11
Identities = 30/77 (38%), Positives = 44/77 (57%)
Frame = +3
Query: 117 DKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFV 296
+KL+V+DF A+WCGPC+MI P + + A+ A E+N+ +MPTFV
Sbjct: 47 NKLLVVDFSASWCGPCRMIEPAIHAM-ADKFNDVDFVKLDVDELPDVAKEFNVTAMPTFV 105
Query: 297 FVKNGKKLDEFSGANVD 347
VK GK+++ GA D
Sbjct: 106 LVKRGKEIERIIGAKKD 122
>At3g08710.1 68416.m01012 thioredoxin family protein similar to
thioredoxin H-type GB:P29448 SP|P29448 [Arabidopsis
thaliana], Thioredoxin H-type 2 (TRX-H2) SP|Q07090
{Nicotiana tabacum}; contains Pfam profile: PF00085
Thioredoxin
Length = 140
Score = 64.1 bits (149), Expect = 1e-10
Identities = 33/92 (35%), Positives = 50/92 (54%)
Frame = +3
Query: 66 IHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXX 245
I K+S D K A+ K+VV +F ATWCGPCK++ P E+ +E
Sbjct: 28 ITTKESWDDKLAEADRDGKIVVANFSATWCGPCKIVAPFFIEL-SEKHSSLMFLLVDVDE 86
Query: 246 XXXXASEYNINSMPTFVFVKNGKKLDEFSGAN 341
+S ++I + PTF F+KNG+++ + GAN
Sbjct: 87 LSDFSSSWDIKATPTFFFLKNGQQIGKLVGAN 118
>At3g51030.1 68416.m05587 thioredoxin H-type 1 (TRX-H-1) identical
to SP|P29448 Thioredoxin H-type 1 (TRX-H-1) {Arabidopsis
thaliana}
Length = 114
Score = 63.7 bits (148), Expect = 1e-10
Identities = 32/96 (33%), Positives = 52/96 (54%)
Frame = +3
Query: 60 MSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXX 239
++ H ++ + + + A LVV+DF A+WCGPC+ I P ++A ++
Sbjct: 9 IACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKL-PNVLFLKVDT 67
Query: 240 XXXXXXASEYNINSMPTFVFVKNGKKLDEFSGANVD 347
AS++ I +MPTF+F+K GK LD+ GA D
Sbjct: 68 DELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKD 103
>At1g76760.1 68414.m08933 thioredoxin family protein similar to
thioredoxin CH2, M-type, chloroplast precursor GB:P23400
SP|P23400 [Chlamydomonas reinhardtii]; contains Pfam
profile: PF00085 Thioredoxin
Length = 172
Score = 63.7 bits (148), Expect = 1e-10
Identities = 26/74 (35%), Positives = 42/74 (56%)
Frame = +3
Query: 117 DKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFV 296
DK V++D+ ATWCGPC+ + P L+E++ + A++Y I ++PTF+
Sbjct: 81 DKPVLVDYYATWCGPCQFMVPILNEVSETLKDKIQVVKIDTEKYPSIANKYKIEALPTFI 140
Query: 297 FVKNGKKLDEFSGA 338
K+G+ D F GA
Sbjct: 141 LFKDGEPCDRFEGA 154
>At5g16400.1 68418.m01917 thioredoxin, putative similar to SP|P29450
Thioredoxin F-type, chloroplast precursor (TRX-F) {Pisum
sativum}; contains Pfam profile: PF00085 Thioredoxin
Length = 185
Score = 62.5 bits (145), Expect = 3e-10
Identities = 30/90 (33%), Positives = 43/90 (47%)
Frame = +3
Query: 78 DSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXX 257
D D + AGDK+VV+D WCGPCK+I PK E++ +
Sbjct: 84 DKDTFWPIVKAAGDKIVVLDMYTQWCGPCKVIAPKYKELSEKYQDMVFLKLDCNQDNKPL 143
Query: 258 ASEYNINSMPTFVFVKNGKKLDEFSGANVD 347
A E I +PTF +K+ K + E +GA +
Sbjct: 144 AKELGIRVVPTFKILKDNKVVKEVTGAKYE 173
>At1g59730.1 68414.m06725 thioredoxin, putative similar to SP|Q38879
Thioredoxin H-type 2 (TRX-H-2) {Arabidopsis thaliana};
contains Pfam profile: PF00085 Thioredoxin
Length = 129
Score = 61.7 bits (143), Expect = 6e-10
Identities = 30/80 (37%), Positives = 43/80 (53%)
Frame = +3
Query: 108 EAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMP 287
+ +KL+VIDF A WCGPCK + P++ EIA++ A Y ++P
Sbjct: 40 KGSNKLLVIDFTAVWCGPCKAMEPRVREIASK-YSEAVFARVDVDRLMDVAGTYRAITLP 98
Query: 288 TFVFVKNGKKLDEFSGANVD 347
FVFVK G+++D GA D
Sbjct: 99 AFVFVKRGEEIDRVVGAKPD 118
>At1g45145.1 68414.m05175 thioredoxin H-type 5 (TRX-H-5) (TOUL)
identical to SP|Q39241 Thioredoxin H-type 5 (TRX-H-5)
{Arabidopsis thaliana}; identical to cDNA (TOUL) mRNA
for thioredoxin GI:992965
Length = 118
Score = 61.3 bits (142), Expect = 8e-10
Identities = 31/85 (36%), Positives = 42/85 (49%)
Frame = +3
Query: 93 KTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYN 272
K + A KL+VIDF A+WC PC+ I P E+A + A E+
Sbjct: 19 KVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKF-TNVVFFKIDVDELQAVAQEFK 77
Query: 273 INSMPTFVFVKNGKKLDEFSGANVD 347
+ +MPTFVF+K G +D GA D
Sbjct: 78 VEAMPTFVFMKEGNIIDRVVGAAKD 102
>At3g15360.1 68416.m01948 thioredoxin M-type 4, chloroplast (TRX-M4)
nearly identical to SP|Q9SEU6 Thioredoxin M-type 4,
chloroplast precursor (TRX-M4) {Arabidopsis thaliana}
Length = 193
Score = 60.9 bits (141), Expect = 1e-09
Identities = 30/90 (33%), Positives = 49/90 (54%)
Frame = +3
Query: 69 HIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXX 248
++ DS+ +T++ E+ D V+++F A WCGPC+MI P +D++A +
Sbjct: 90 NLSDSE-WQTKVLES-DVPVLVEFWAPWCGPCRMIHPIVDQLAKDFAGKFKFYKINTDES 147
Query: 249 XXXASEYNINSMPTFVFVKNGKKLDEFSGA 338
A+ Y I S+PT + K G+K D GA
Sbjct: 148 PNTANRYGIRSVPTVIIFKGGEKKDSIIGA 177
>At3g02730.1 68416.m00265 thioredoxin, putative similar to SP|P29450
Thioredoxin F-type, chloroplast precursor (TRX-F) {Pisum
sativum}; contains Pfam profile: PF00085 Thioredoxin
Length = 178
Score = 60.9 bits (141), Expect = 1e-09
Identities = 30/90 (33%), Positives = 42/90 (46%)
Frame = +3
Query: 78 DSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXX 257
D D + AG+KLVV+D WCGPCK+I PK ++ +
Sbjct: 74 DKDTFWPIVKAAGEKLVVLDMYTQWCGPCKVIAPKYKALSEKYDDVVFLKLDCNPDNRPL 133
Query: 258 ASEYNINSMPTFVFVKNGKKLDEFSGANVD 347
A E I +PTF +K+ K + E +GA D
Sbjct: 134 AKELGIRVVPTFKILKDNKVVKEVTGAKYD 163
>At5g42980.1 68418.m05242 thioredoxin H-type 3 (TRX-H-3) (GIF1)
identical to SP|Q42403 Thioredoxin H-type 3 (TRX-H-3)
{Arabidopsis thaliana}; identical to cDNA (GIF1) mRNA
for thioredoxin GI:992961
Length = 118
Score = 58.0 bits (134), Expect = 7e-09
Identities = 28/82 (34%), Positives = 41/82 (50%)
Frame = +3
Query: 93 KTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYN 272
K + A KL+VIDF ATWC PC+ I P ++ A+ A E+
Sbjct: 19 KLKAANESKKLIVIDFTATWCPPCRFIAPVFADL-AKKHLDVVFFKVDVDELNTVAEEFK 77
Query: 273 INSMPTFVFVKNGKKLDEFSGA 338
+ +MPTF+F+K G+ + GA
Sbjct: 78 VQAMPTFIFMKEGEIKETVVGA 99
>At1g03680.1 68414.m00347 thioredoxin M-type 1, chloroplast (TRX-M1)
nearly identical to SP|O48737 Thioredoxin M-type 1,
chloroplast precursor (TRX-M1) {Arabidopsis thaliana};
similar to ESTs gb|T13714, gb|H76398, gb|N37762,
gb|AA042639, gb|T21104, emb|Z30901
Length = 179
Score = 58.0 bits (134), Expect = 7e-09
Identities = 28/86 (32%), Positives = 40/86 (46%)
Frame = +3
Query: 81 SDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXA 260
+D L D+ V +DF A WCGPCKMI P ++E+A +
Sbjct: 80 NDSTWDSLVLKADEPVFVDFWAPWCGPCKMIDPIVNELAQKYAGQFKFYKLNTDESPATP 139
Query: 261 SEYNINSMPTFVFVKNGKKLDEFSGA 338
+Y + S+PT + NG+K D GA
Sbjct: 140 GQYGVRSIPTIMIFVNGEKKDTIIGA 165
>At4g03520.1 68417.m00480 thioredoxin M-type 2, chloroplast (TRX-M2)
nearly identical to SP|Q9SEU8 Thioredoxin M-type 2,
chloroplast precursor (TRX-M2) {Arabidopsis thaliana}
Length = 186
Score = 54.4 bits (125), Expect = 9e-08
Identities = 24/71 (33%), Positives = 34/71 (47%)
Frame = +3
Query: 126 VVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVFVK 305
VV+DF A WCGPCKMI P ++++A +Y + S+PT +
Sbjct: 101 VVVDFWAPWCGPCKMIDPLVNDLAQHYTGKIKFYKLNTDESPNTPGQYGVRSIPTIMIFV 160
Query: 306 NGKKLDEFSGA 338
G+K D GA
Sbjct: 161 GGEKKDTIIGA 171
>At2g15570.1 68415.m01783 thioredoxin M-type 3, chloroplast (TRX-M3)
identical to SP|Q9SEU7 Thioredoxin M-type 3, chloroplast
precursor (TRX-M3) {Arabidopsis thaliana}
Length = 173
Score = 53.2 bits (122), Expect = 2e-07
Identities = 22/70 (31%), Positives = 35/70 (50%)
Frame = +3
Query: 126 VVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVFVK 305
V+++F +WCGPC+M+ +DEIA + A EY I ++P + K
Sbjct: 87 VLVEFYTSWCGPCRMVHRIIDEIAGDYAGKLNCYLLNADNDLPVAEEYEIKAVPVVLLFK 146
Query: 306 NGKKLDEFSG 335
NG+K + G
Sbjct: 147 NGEKRESIMG 156
>At1g50320.1 68414.m05641 thioredoxin x nearly identical to
thioredoxin x GB:AAF15952 GI:6539616 from [Arabidopsis
thaliana]
Length = 182
Score = 51.2 bits (117), Expect = 8e-07
Identities = 19/65 (29%), Positives = 36/65 (55%)
Frame = +3
Query: 126 VVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVFVK 305
V+++F+ATWCGPCK+I P ++ ++ E +E+ + +P F+ K
Sbjct: 90 VLVEFVATWCGPCKLIYPAMEALSQEYGDKLTIVKIDHDANPKLIAEFKVYGLPHFILFK 149
Query: 306 NGKKL 320
+GK++
Sbjct: 150 DGKEV 154
>At4g26160.1 68417.m03765 thioredoxin family protein low similarity
to thioredoxin [Ictalurus punctatus] GI:9837585;
contains Pfam profile: PF00085 Thioredoxin
Length = 221
Score = 50.0 bits (114), Expect = 2e-06
Identities = 22/50 (44%), Positives = 31/50 (62%)
Frame = +3
Query: 54 PKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAE 203
P M I I ++ L +AGD+LV++DF TWCG C+ + PKL + A E
Sbjct: 93 PNM-IDITSAEQFLNALKDAGDRLVIVDFYGTWCGSCRAMFPKLCKTAKE 141
>At2g33270.1 68415.m04078 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin
Length = 273
Score = 48.4 bits (110), Expect = 6e-06
Identities = 32/98 (32%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
Frame = +3
Query: 51 KPKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXX 230
KP M + DL L AGDKLVV+DF + CG CK + PK+ +I AE
Sbjct: 92 KPNMK-SVTSPQDLVVSLRNAGDKLVVVDFFSPSCGGCKALHPKICKI-AEKNPEVEFLQ 149
Query: 231 XXXXXXXXXASEYNINSMPTFVFVKNGK-KLDEFSGAN 341
NI+ +P F F + ++ FS N
Sbjct: 150 VNYEEHRSLCQSLNIHVLPFFRFYRGSSGRVCSFSCTN 187
>At2g40790.1 68415.m05032 thioredoxin family protein contains Pfam
profile: PF00085 thioredoxin
Length = 154
Score = 47.6 bits (108), Expect = 1e-05
Identities = 23/79 (29%), Positives = 43/79 (54%)
Frame = +3
Query: 105 AEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSM 284
A + K++V++F A+WC P K I P E+A+ + E+N+++
Sbjct: 58 ANSHGKILVVNFKASWCLPSKTILPIYQELAS-TYTSMIFVTIDVEELAEFSHEWNVDAT 116
Query: 285 PTFVFVKNGKKLDEFSGAN 341
PT VF+K+G+++D+ G +
Sbjct: 117 PTVVFLKDGRQMDKLVGGD 135
>At2g35010.1 68415.m04295 thioredoxin family protein similar to
SP|Q42443 Thioredoxin H-type (TRX-H) {Oryza sativa};
contains Pfam profile: PF00085 Thioredoxin
Length = 194
Score = 46.8 bits (106), Expect = 2e-05
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 3/94 (3%)
Frame = +3
Query: 72 IKDSDDLKTRLAEAGDKLV--VIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXX 245
+K ++ +++A D + V F A WCGPC+ I P + E++ +
Sbjct: 89 VKSEEEFINAMSKAQDGSLPSVFYFTAAWCGPCRFISPVIVELSKQYPDVTTYKVDIDEG 148
Query: 246 XXXXA-SEYNINSMPTFVFVKNGKKLDEFSGANV 344
S+ NI ++PT F K G K E GA+V
Sbjct: 149 GISNTISKLNITAVPTLHFFKGGSKKGEVVGADV 182
>At4g29670.2 68417.m04227 thioredoxin family protein contains Pfam
profile PF00085: Thioredoxin
Length = 236
Score = 45.6 bits (103), Expect = 4e-05
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Frame = +3
Query: 54 PKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXX 233
P M + I +++ + L+ AG++LV+++F TWC C+ + PKL + A E
Sbjct: 103 PNM-VDIHSTEEFLSALSGAGERLVIVEFYGTWCASCRALFPKLCKTAVEHPDIVFLKVN 161
Query: 234 XXXXXXXXASEYNINSMPTFVFVKNGK-KLDEFS 332
S N+ +P F F + +L+ FS
Sbjct: 162 FDENKPMCKS-LNVRVLPFFHFYRGADGQLESFS 194
>At4g29670.1 68417.m04226 thioredoxin family protein contains Pfam
profile PF00085: Thioredoxin
Length = 235
Score = 45.6 bits (103), Expect = 4e-05
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Frame = +3
Query: 54 PKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXX 233
P M + I +++ + L+ AG++LV+++F TWC C+ + PKL + A E
Sbjct: 103 PNM-VDIHSTEEFLSALSGAGERLVIVEFYGTWCASCRALFPKLCKTAVEHPDIVFLKVN 161
Query: 234 XXXXXXXXASEYNINSMPTFVFVKNGK-KLDEFS 332
S N+ +P F F + +L+ FS
Sbjct: 162 FDENKPMCKS-LNVRVLPFFHFYRGADGQLESFS 194
>At1g31020.1 68414.m03798 thioredoxin o (TRXO2) similar to
thioredoxin 2 from Saccharomyces cerevisiae GI:173050,
3'-end of protein contains similarity to thioredoxins;
contains Pfam profile: PF00085 Thioredoxin; identical to
cDNA thioredoxin o (TRXO2) GI:15081458
Length = 159
Score = 44.8 bits (101), Expect = 7e-05
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 3/94 (3%)
Frame = +3
Query: 72 IKDSDDLKTRLAEAGDKLV--VIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXX 245
+K + + L++A D + V F A WCGPC++I P + E++ +
Sbjct: 54 LKSEAEFNSALSKARDGSLPSVFYFTAAWCGPCRLISPVILELSNKYPDVTTYKVDIDEG 113
Query: 246 XXXXA-SEYNINSMPTFVFVKNGKKLDEFSGANV 344
A + N++++PT F K G K E G +V
Sbjct: 114 GLSNAIGKLNVSAVPTLQFFKGGVKKAEIVGVDV 147
>At1g08570.1 68414.m00950 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin; similar to ESTs gb|T46281,
gb|R83933, gb|N65879, emb|F14466, gb|N96726,
gb|AA042340, and emb|Z18150
Length = 275
Score = 44.8 bits (101), Expect = 7e-05
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Frame = +3
Query: 72 IKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXX 251
I + +L L AGDKLVV+DF + CG CK + PK+ + AEM
Sbjct: 102 ISSAQELVDSLTNAGDKLVVVDFFSPGCGGCKALHPKICQF-AEMNPDVQFLQVNYEEHK 160
Query: 252 XXASEYNINSMPTFVFVKNGK-KLDEFSGAN 341
++ +P F F + + ++ FS N
Sbjct: 161 SMCYSLGVHVLPFFRFYRGSQGRVCSFSCTN 191
>At5g61440.1 68418.m07709 thioredoxin family protein low similarity
to thioredoxin [Callithrix jacchus] GI:13560979;
contains Pfam profile: PF00085 Thioredoxin
Length = 245
Score = 43.6 bits (98), Expect = 2e-04
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Frame = +3
Query: 66 IHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXX 245
+ I+ ++ L L AGD+LVV+DF + CG CK + PK+ ++ AE
Sbjct: 88 LEIQSANHLVDSLLNAGDRLVVLDFYSPGCGGCKSLHPKICQL-AETNPNVMFLKVNQEE 146
Query: 246 XXXXASEYNINSMPTFVFVKNGK-KLDEFS 332
N++ +P F F + + K+ FS
Sbjct: 147 LRTMCHGLNVHVLPFFKFYRGAEGKVCSFS 176
>At3g56420.1 68416.m06275 thioredoxin family protein similar to
thioredoxin [Nicotiana tabacum] GI:20047; contains Pfam
profile: PF00085 Thioredoxin
Length = 100
Score = 43.6 bits (98), Expect = 2e-04
Identities = 20/65 (30%), Positives = 34/65 (52%)
Frame = +3
Query: 144 ATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVFVKNGKKLD 323
A WC PCK I P ++A+ ++E+N+ + PT VF+K+G+++D
Sbjct: 17 APWCVPCKKIEPVFRDLASRYPSMIFVTVDVEELAEF-SNEWNVEATPTVVFLKDGRQMD 75
Query: 324 EFSGA 338
+ GA
Sbjct: 76 KLVGA 80
>At3g06730.1 68416.m00798 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin
Length = 183
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +3
Query: 114 GDKLV--VIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMP 287
GD+ V ++DF ATWCGPC ++ +L+ +A E A + + +P
Sbjct: 91 GDRKVPLIVDFYATWCGPCILMAQELEMLAVEYESNAIIVKVDTDDEYEFARDMQVRGLP 150
Query: 288 TFVFV 302
T F+
Sbjct: 151 TLFFI 155
>At1g11530.1 68414.m01324 thioredoxin family protein similar to
thioredoxin H-type from Arabidopsis thaliana SP|P29448,
Nicotiana tabacum SP|Q07090; contains Pfam profile:
PF00085 Thioredoxin
Length = 118
Score = 42.3 bits (95), Expect = 4e-04
Identities = 22/74 (29%), Positives = 34/74 (45%)
Frame = +3
Query: 126 VVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVFVK 305
+V F A WC P + +E+A AS+ + +MPTF+F+K
Sbjct: 27 IVAHFTALWCIPSVFMNSFFEELAFNYKDALFLIVDVDEVKEV-ASQLEVKAMPTFLFLK 85
Query: 306 NGKKLDEFSGANVD 347
+G +D+ GAN D
Sbjct: 86 DGNAMDKLVGANPD 99
>At1g77510.1 68414.m09026 protein disulfide isomerase, putative
similar to protein disulfide isomerase precursor
GB:P29828 GI:4704766 [Medicago sativa]; Pfam HMM hit:
PF00085 Thioredoxins
Length = 508
Score = 41.5 bits (93), Expect = 7e-04
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Frame = +3
Query: 126 VVIDFMATWCGPCKMIGPKLDEIAAEM-----XXXXXXXXXXXXXXXXXASEYNINSMPT 290
+V++F A WCG C+ + P+ ++ A+E+ A+EY I PT
Sbjct: 49 IVVEFYAPWCGHCQKLAPEYEKAASELSSHNPPLALAKIDASEEANKEFANEYKIQGFPT 108
Query: 291 FVFVKN-GKKLDEFSG 335
++N GK + +++G
Sbjct: 109 LKILRNGGKSVQDYNG 124
Score = 37.5 bits (83), Expect = 0.011
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 7/56 (12%)
Frame = +3
Query: 51 KPKMSIHIKDSDDLKTRLAEAGD-------KLVVIDFMATWCGPCKMIGPKLDEIA 197
K I ++++ +K +AE+ D K V+I+F A WCG C+ + P LDE+A
Sbjct: 361 KKSQPIPAENNEPVKVVVAESLDDIVFKSGKNVLIEFYAPWCGHCQKLAPILDEVA 416
>At2g32920.1 68415.m04036 thioredoxin family protein similar to
SP|Q15084 Protein disulfide isomerase A6 precursor (EC
5.3.4.1) {Homo sapiens}; contains Pfam profile PF00085:
Thioredoxin
Length = 440
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/72 (26%), Positives = 31/72 (43%)
Frame = +3
Query: 123 LVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVFV 302
+V+++F A WCG CK + P +++A + A +Y I PT
Sbjct: 50 VVLVEFFAPWCGHCKALTPTWEKVANILKGVATVAAIDADAHQSAAQDYGIKGFPTIKVF 109
Query: 303 KNGKKLDEFSGA 338
GK ++ GA
Sbjct: 110 VPGKAPIDYQGA 121
Score = 33.9 bits (74), Expect = 0.13
Identities = 19/84 (22%), Positives = 33/84 (39%), Gaps = 2/84 (2%)
Frame = +3
Query: 51 KPKMSIHIKDS--DDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXX 224
+P S+ + S DDL ++L +++F A WCG CK + P+ A +
Sbjct: 160 EPSASVELNASNFDDLVIE----SNELWIVEFFAPWCGHCKKLAPEWKRAAKNLQGKVKL 215
Query: 225 XXXXXXXXXXXASEYNINSMPTFV 296
S + + PT +
Sbjct: 216 GHVNCDVEQSIMSRFKVQGFPTIL 239
>At1g52990.1 68414.m05997 thioredoxin family protein similar to
SP|P48384 Thioredoxin M-type, chloroplast precursor
(TRX-M) {Pisum sativum}; contains Pfam profile PF00085:
Thioredoxin
Length = 313
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/72 (25%), Positives = 37/72 (51%)
Frame = +3
Query: 126 VVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVFVK 305
V++ F A WCGPC+ + P L+++ +E ++I+ +PT + K
Sbjct: 230 VMVMFTARWCGPCRDMIPILNKMDSEYKNEFKFYTVNFDTEIRFTERFDISYLPTTLVFK 289
Query: 306 NGKKLDEFSGAN 341
G+++ + +GA+
Sbjct: 290 GGEQMAKVTGAD 301
>At1g21750.2 68414.m02723 protein disulfide isomerase, putative
similar to SP|P29828 Protein disulfide isomerase
precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform
contains non-consensus GA donor splice site at intron 9
Length = 487
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 6/76 (7%)
Frame = +3
Query: 126 VVIDFMATWCGPCKMIGPKLDEIAAEM-----XXXXXXXXXXXXXXXXXASEYNINSMPT 290
+V++F A WCG CK + P+ ++ A+ + A++Y + PT
Sbjct: 50 IVVEFYAPWCGHCKQLAPEYEKAASALSSNVPPVVLAKIDASEETNREFATQYEVQGFPT 109
Query: 291 F-VFVKNGKKLDEFSG 335
+F GK + E++G
Sbjct: 110 IKIFRNGGKAVQEYNG 125
Score = 38.3 bits (85), Expect = 0.006
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +3
Query: 81 SDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIA 197
SD L + +G K V+++F A WCG C+ + P LDE+A
Sbjct: 381 SDSLDDIVLNSG-KNVLLEFYAPWCGHCQKLAPILDEVA 418
>At1g21750.1 68414.m02722 protein disulfide isomerase, putative
similar to SP|P29828 Protein disulfide isomerase
precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform
contains non-consensus GA donor splice site at intron 9
Length = 501
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 6/76 (7%)
Frame = +3
Query: 126 VVIDFMATWCGPCKMIGPKLDEIAAEM-----XXXXXXXXXXXXXXXXXASEYNINSMPT 290
+V++F A WCG CK + P+ ++ A+ + A++Y + PT
Sbjct: 50 IVVEFYAPWCGHCKQLAPEYEKAASALSSNVPPVVLAKIDASEETNREFATQYEVQGFPT 109
Query: 291 F-VFVKNGKKLDEFSG 335
+F GK + E++G
Sbjct: 110 IKIFRNGGKAVQEYNG 125
Score = 38.3 bits (85), Expect = 0.006
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +3
Query: 81 SDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIA 197
SD L + +G K V+++F A WCG C+ + P LDE+A
Sbjct: 381 SDSLDDIVLNSG-KNVLLEFYAPWCGHCQKLAPILDEVA 418
>At1g04980.1 68414.m00497 thioredoxin family protein similar to
SP|Q63081 Protein disulfide isomerase A6 precursor (EC
5.3.4.1) {Rattus norvegicus}; contains Pfam profile
PF00085: Thioredoxin
Length = 443
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/72 (22%), Positives = 32/72 (44%)
Frame = +3
Query: 123 LVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVFV 302
+V+++F A WCG C+ + P +++A+ + + +Y + PT
Sbjct: 48 VVLVEFFAPWCGHCQSLTPTWEKVASTLKGIATVAAIDADAHKSVSQDYGVRGFPTIKVF 107
Query: 303 KNGKKLDEFSGA 338
GK ++ GA
Sbjct: 108 VPGKPPIDYQGA 119
Score = 35.9 bits (79), Expect = 0.033
Identities = 21/90 (23%), Positives = 36/90 (40%), Gaps = 2/90 (2%)
Frame = +3
Query: 51 KPKMSIHIKDS--DDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXX 224
+P S+ + S D+L T E L +++F A WCG CK + P+ + A +
Sbjct: 161 EPSASVELNSSNFDELVTESKE----LWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKL 216
Query: 225 XXXXXXXXXXXASEYNINSMPTFVFVKNGK 314
S + + PT + + K
Sbjct: 217 GHVNCDAEQSIKSRFKVQGFPTILVFGSDK 246
>At1g35620.1 68414.m04425 thioredoxin family protein similar to
SP|Q43116 Protein disulfide isomerase precursor (PDI)
(EC 5.3.4.1) {Ricinus communis}; contains Pfam profile
PF00085: Thioredoxin
Length = 440
Score = 38.7 bits (86), Expect = 0.005
Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
Frame = +3
Query: 126 VVIDFMATWCGPCKMIGPKLD---EIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFV 296
+ +DF A WCG CK + P+LD I A++ A + I++ PT +
Sbjct: 52 IFVDFYAPWCGHCKRLNPELDAAAPILAKLKQPIVIAKLNADKYSRLARKIEIDAFPTLM 111
Query: 297 FVKNGKKLDEFSGANVD 347
+G ++ + D
Sbjct: 112 LYNHGVPMEYYGPRKAD 128
>At5g04260.1 68418.m00417 thioredoxin family protein low similarity
to SP|P29429 Thioredoxin. [Aspergillus nidulans]
{Emericella nidulans}; contains Pfam profile: PF00085
Thioredoxin
Length = 192
Score = 37.9 bits (84), Expect = 0.008
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = +3
Query: 126 VVIDFMATWCGPCKMIGPKLDEIAAEM-XXXXXXXXXXXXXXXXXASEYNINSMPTFVFV 302
VVI +MA WC C + PKL+++AAE S + MPT
Sbjct: 101 VVIVWMAAWCRKCIYLKPKLEKLAAEFYPRLRFYHVDVNAVPYRLVSRAGVTKMPTIQLW 160
Query: 303 KNGKKLDEFSGAN 341
++G+K E G +
Sbjct: 161 RDGQKQAEVIGGH 173
>At5g60640.2 68418.m07611 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 536
Score = 37.5 bits (83), Expect = 0.011
Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +3
Query: 117 DKLVVIDFMATWCGPCKMIGPKLDEIAAEM-XXXXXXXXXXXXXXXXXASEYNINSMPTF 293
++ V+++F A WCG C+ + P+ A E+ A EY + PT
Sbjct: 120 NQYVLVEFYAPWCGHCQSLAPEYAAAATELKEDGVVLAKIDATEENELAQEYRVQGFPTL 179
Query: 294 VFVKNGK 314
+F +G+
Sbjct: 180 LFFVDGE 186
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/69 (21%), Positives = 26/69 (37%)
Frame = +3
Query: 120 KLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVF 299
K V+++ A WCG C+ + P +++A + + PT +F
Sbjct: 460 KDVLLEVYAPWCGHCQALEPMYNKLAKHLRSIDSLVITKMDGTTNEHPKAKAEGFPTILF 519
Query: 300 VKNGKKLDE 326
G K E
Sbjct: 520 FPAGNKTSE 528
>At5g60640.1 68418.m07610 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 597
Score = 37.5 bits (83), Expect = 0.011
Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +3
Query: 117 DKLVVIDFMATWCGPCKMIGPKLDEIAAEM-XXXXXXXXXXXXXXXXXASEYNINSMPTF 293
++ V+++F A WCG C+ + P+ A E+ A EY + PT
Sbjct: 120 NQYVLVEFYAPWCGHCQSLAPEYAAAATELKEDGVVLAKIDATEENELAQEYRVQGFPTL 179
Query: 294 VFVKNGK 314
+F +G+
Sbjct: 180 LFFVDGE 186
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/69 (21%), Positives = 26/69 (37%)
Frame = +3
Query: 120 KLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVF 299
K V+++ A WCG C+ + P +++A + + PT +F
Sbjct: 460 KDVLLEVYAPWCGHCQALEPMYNKLAKHLRSIDSLVITKMDGTTNEHPKAKAEGFPTILF 519
Query: 300 VKNGKKLDE 326
G K E
Sbjct: 520 FPAGNKTSE 528
>At5g06690.1 68418.m00756 thioredoxin family protein low similiarity
to SP|P34723 Thioredoxin {Penicillium chrysogenum};
contains Pfam profile: PF00085 Thioredoxin
Length = 210
Score = 37.5 bits (83), Expect = 0.011
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +3
Query: 126 VVIDFMATWCGPCKMIGPKLDEIAAEM-XXXXXXXXXXXXXXXXXASEYNINSMPTFVFV 302
++I++MA+WC C + PKL+++AAE NI+ MPT
Sbjct: 121 IIIEWMASWCRKCIYLKPKLEKLAAEYNNRAKFYYVDVNKVPQTLVKRGNISKMPTIQLW 180
Query: 303 KNGKKLDEFSGAN 341
K + +E G +
Sbjct: 181 KEDEMKEEVIGGH 193
>At4g04950.1 68417.m00719 thioredoxin family protein similar to
PKCq-interacting protein PICOT from [Mus musculus]
GI:6840949, [Rattus norvegicus] GI:6840951; contains
Pfam profile PF00085: Thioredoxin
Length = 488
Score = 37.5 bits (83), Expect = 0.011
Identities = 19/72 (26%), Positives = 32/72 (44%)
Frame = +3
Query: 126 VVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVFVK 305
VV+ F A+WC K + +A + + Y++ ++P FVF K
Sbjct: 24 VVLHFWASWCDASKQMDQVFSHLATDFPRAHFFRVEAEEHPEI-SEAYSVAAVPYFVFFK 82
Query: 306 NGKKLDEFSGAN 341
+GK +D GA+
Sbjct: 83 DGKTVDTLEGAD 94
>At1g76080.1 68414.m08835 thioredoxin family protein low similarity
to thioredoxin (TRX) [Fasciola hepatica] GI:6687568;
contains Pfam profile PF00085: Thioredoxin
Length = 302
Score = 37.1 bits (82), Expect = 0.014
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Frame = +3
Query: 114 GDKLVVIDFMATWCGPCKMIGP---KLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSM 284
G KL+V+D CGPC + P KL +E + N+ +
Sbjct: 206 GGKLIVLDVGLKHCGPCVKVYPTVLKLSRSMSETVVFARMNGDENDSCMEFLKDMNVIEV 265
Query: 285 PTFVFVKNGKKLDEFSGA 338
PTF+F+++G+ + G+
Sbjct: 266 PTFLFIRDGEIRGRYVGS 283
>At3g54960.1 68416.m06094 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 579
Score = 36.7 bits (81), Expect = 0.019
Identities = 16/73 (21%), Positives = 28/73 (38%)
Frame = +3
Query: 117 DKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFV 296
+ +++F A WCG C+ + P+ A E+ A +Y I PT
Sbjct: 116 NSFAMVEFYAPWCGACQALTPEYAAAATELKGLAALAKIDATEEGDLAQKYEIQGFPTVF 175
Query: 297 FVKNGKKLDEFSG 335
+G+ + G
Sbjct: 176 LFVDGEMRKTYEG 188
>At3g53220.1 68416.m05864 thioredoxin family protein low similarity
to SP|P29451 Thioredoxin [Rhesus macaque] {Macaca
mulatta}; contains Pfam profile: PF00085 Thioredoxin
Length = 126
Score = 36.7 bits (81), Expect = 0.019
Identities = 24/85 (28%), Positives = 39/85 (45%)
Frame = +3
Query: 84 DDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXAS 263
DD+K+ + A VI++ A+WCG C I P +++ +
Sbjct: 37 DDIKSSKSPA-----VINYGASWCGVCSQILPAFRKLSNSFSKLKFVYADIDECPE---T 88
Query: 264 EYNINSMPTFVFVKNGKKLDEFSGA 338
+I PTF F ++G+K+DE GA
Sbjct: 89 TRHIRYTPTFQFYRDGEKVDEMFGA 113
>At4g32580.1 68417.m04638 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin
Length = 160
Score = 35.9 bits (79), Expect = 0.033
Identities = 26/96 (27%), Positives = 41/96 (42%), Gaps = 2/96 (2%)
Frame = +3
Query: 60 MSIHIKD--SDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXX 233
MS +KD S + L +G LV + F A+WC K + +A +
Sbjct: 1 MSGTVKDIVSKEELDNLRHSGAPLV-LHFWASWCDASKQMDQVFSHLATDFPRAHFFRVE 59
Query: 234 XXXXXXXXASEYNINSMPTFVFVKNGKKLDEFSGAN 341
+ Y++ +P FVF K+GK +D GA+
Sbjct: 60 AEEHPEI-SEAYSVALVPYFVFFKDGKTVDTLEGAD 94
>At2g47470.2 68415.m05924 thioredoxin family protein similar to
protein disulfide isomerase [Dictyostelium discoideum]
GI:2627440; contains Pfam profile: PF00085 Thioredoxin
Length = 266
Score = 35.5 bits (78), Expect = 0.043
Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Frame = +3
Query: 117 DKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXA--SEYNINSMPT 290
+K V+++F A WCG CK + P +++A A +Y ++ PT
Sbjct: 159 NKDVLVEFYAPWCGHCKSLAPTYEKVATVFKQEEGVVIANLDADAHKALGEKYGVSGFPT 218
Query: 291 F-VFVKNGKKLDEFSG 335
F K+ K ++ G
Sbjct: 219 LKFFPKDNKAGHDYDG 234
Score = 34.7 bits (76), Expect = 0.076
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +3
Query: 117 DKLVVIDFMATWCGPCKMIGPKLDEIAA 200
DK +++F A WCG CK + P+ +++ A
Sbjct: 40 DKGALVEFYAPWCGHCKKLAPEYEKLGA 67
>At2g47470.1 68415.m05925 thioredoxin family protein similar to
protein disulfide isomerase [Dictyostelium discoideum]
GI:2627440; contains Pfam profile: PF00085 Thioredoxin
Length = 361
Score = 35.5 bits (78), Expect = 0.043
Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Frame = +3
Query: 117 DKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXA--SEYNINSMPT 290
+K V+++F A WCG CK + P +++A A +Y ++ PT
Sbjct: 159 NKDVLVEFYAPWCGHCKSLAPTYEKVATVFKQEEGVVIANLDADAHKALGEKYGVSGFPT 218
Query: 291 F-VFVKNGKKLDEFSG 335
F K+ K ++ G
Sbjct: 219 LKFFPKDNKAGHDYDG 234
Score = 34.7 bits (76), Expect = 0.076
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +3
Query: 117 DKLVVIDFMATWCGPCKMIGPKLDEIAA 200
DK +++F A WCG CK + P+ +++ A
Sbjct: 40 DKGALVEFYAPWCGHCKKLAPEYEKLGA 67
>At1g60420.1 68414.m06802 DC1 domain-containing protein contains
Pfam domain PF03107: DC1 domain
Length = 578
Score = 34.3 bits (75), Expect = 0.10
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +3
Query: 69 HIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEI 194
++ D K +++ K +++ F A WC PC+ PKL E+
Sbjct: 347 YVLGKDGAKVLVSDLVGKTILMYFSAHWCPPCRAFTPKLVEV 388
Score = 32.7 bits (71), Expect = 0.31
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 120 KLVVIDFMATWCGPCKMIGPKLDEIAAEM 206
K + + F A WCGPC+ P+L E+ E+
Sbjct: 44 KKIGLYFSAAWCGPCQRFTPQLVEVYNEL 72
>At1g07700.3 68414.m00829 thioredoxin family protein low similarity
to thioredoxin [Gallus gallus] GI:212766; contains Pfam
profile: PF00085 Thioredoxin
Length = 217
Score = 33.5 bits (73), Expect = 0.18
Identities = 26/95 (27%), Positives = 39/95 (41%), Gaps = 9/95 (9%)
Frame = +3
Query: 75 KDSDDLKTRLAEAGD--KLVVIDFMATWCGPCKMIGPKLDEIA-------AEMXXXXXXX 227
K D+L + L ++ + LVV+DF T CG CK I ++ A +
Sbjct: 104 KTDDELLSVLEKSKETNSLVVVDFYRTACGSCKYIEQGFSKLCKQSGDQEAPVIFLKHNV 163
Query: 228 XXXXXXXXXXASEYNINSMPTFVFVKNGKKLDEFS 332
A I ++P F F KNG L+ F+
Sbjct: 164 VDEYDEQSEVAERLRIKAVPLFHFYKNGVLLESFA 198
>At1g07700.1 68414.m00828 thioredoxin family protein low similarity
to thioredoxin [Gallus gallus] GI:212766; contains Pfam
profile: PF00085 Thioredoxin
Length = 204
Score = 33.5 bits (73), Expect = 0.18
Identities = 26/95 (27%), Positives = 39/95 (41%), Gaps = 9/95 (9%)
Frame = +3
Query: 75 KDSDDLKTRLAEAGD--KLVVIDFMATWCGPCKMIGPKLDEIA-------AEMXXXXXXX 227
K D+L + L ++ + LVV+DF T CG CK I ++ A +
Sbjct: 91 KTDDELLSVLEKSKETNSLVVVDFYRTACGSCKYIEQGFSKLCKQSGDQEAPVIFLKHNV 150
Query: 228 XXXXXXXXXXASEYNINSMPTFVFVKNGKKLDEFS 332
A I ++P F F KNG L+ F+
Sbjct: 151 VDEYDEQSEVAERLRIKAVPLFHFYKNGVLLESFA 185
>At1g07960.3 68414.m00867 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 32.3 bits (70), Expect = 0.40
Identities = 16/70 (22%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Frame = +3
Query: 132 IDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXA--SEYNINSMPTFVFVK 305
+ F WC CK +G +++ M A ++ I+S PTF+
Sbjct: 48 VKFCVPWCKHCKKLGNLWEDLGKAMEGDDEIEVGEVDCGTSRAVCTKVEIHSYPTFMLFY 107
Query: 306 NGKKLDEFSG 335
NG+++ ++ G
Sbjct: 108 NGEEVSKYKG 117
>At1g07960.2 68414.m00866 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 32.3 bits (70), Expect = 0.40
Identities = 16/70 (22%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Frame = +3
Query: 132 IDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXA--SEYNINSMPTFVFVK 305
+ F WC CK +G +++ M A ++ I+S PTF+
Sbjct: 48 VKFCVPWCKHCKKLGNLWEDLGKAMEGDDEIEVGEVDCGTSRAVCTKVEIHSYPTFMLFY 107
Query: 306 NGKKLDEFSG 335
NG+++ ++ G
Sbjct: 108 NGEEVSKYKG 117
>At1g07960.1 68414.m00865 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 32.3 bits (70), Expect = 0.40
Identities = 16/70 (22%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Frame = +3
Query: 132 IDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXA--SEYNINSMPTFVFVK 305
+ F WC CK +G +++ M A ++ I+S PTF+
Sbjct: 48 VKFCVPWCKHCKKLGNLWEDLGKAMEGDDEIEVGEVDCGTSRAVCTKVEIHSYPTFMLFY 107
Query: 306 NGKKLDEFSG 335
NG+++ ++ G
Sbjct: 108 NGEEVSKYKG 117
>At3g03860.1 68416.m00398 expressed protein
Length = 300
Score = 31.9 bits (69), Expect = 0.53
Identities = 18/76 (23%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = +3
Query: 78 DSDDLKTRLA-EAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXX 254
D D L +A + G+ + + F A+WC + + PK D +++
Sbjct: 60 DGDSLDRLMASQHGNAYMSVLFYASWCPFSRAVRPKFDMLSSMFPQIQHLAVEHSQALPS 119
Query: 255 XASEYNINSMPTFVFV 302
S Y I+S+P+ + V
Sbjct: 120 VFSRYGIHSLPSILMV 135
>At2g41680.1 68415.m05149 thioredoxin reductase, putative /
NADPH-dependent thioredoxin reductase, putative The last
2 exons encode thioredoxin. There is an EST match to
exons 5-7, and the distance between exon 7 and exon 8 is
only 90bp. It is unlikely this is two separate genes,
but more likely a hybrid protein.
Length = 529
Score = 31.9 bits (69), Expect = 0.53
Identities = 17/82 (20%), Positives = 32/82 (39%)
Frame = +3
Query: 99 RLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNIN 278
+L +++++ + + CGPC+ + P L+++ E A I
Sbjct: 436 KLYHESPRVILVLYTSPTCGPCRTLKPILNKVVDEYNHDVHFVEIDIEEDQEIAEAAGIM 495
Query: 279 SMPTFVFVKNGKKLDEFSGANV 344
P F KN + L SG +
Sbjct: 496 GTPCVQFFKNKEMLRTISGVKM 517
>At1g07700.2 68414.m00827 thioredoxin family protein low similarity
to thioredoxin [Gallus gallus] GI:212766; contains Pfam
profile: PF00085 Thioredoxin
Length = 171
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +3
Query: 75 KDSDDLKTRLAEAGD--KLVVIDFMATWCGPCKMI 173
K D+L + L ++ + LVV+DF T CG CK I
Sbjct: 91 KTDDELLSVLEKSKETNSLVVVDFYRTACGSCKYI 125
>At4g31240.2 68417.m04435 expressed protein
Length = 392
Score = 27.9 bits (59), Expect = 8.7
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 120 KLVVIDFMATWCGPCKMIGPKL 185
K + + F A WC PCK P+L
Sbjct: 44 KTICLFFSAIWCRPCKDFTPEL 65
>At4g31240.1 68417.m04434 expressed protein
Length = 392
Score = 27.9 bits (59), Expect = 8.7
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 120 KLVVIDFMATWCGPCKMIGPKL 185
K + + F A WC PCK P+L
Sbjct: 44 KTICLFFSAIWCRPCKDFTPEL 65
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,746,354
Number of Sequences: 28952
Number of extensions: 289672
Number of successful extensions: 745
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 695
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 717
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1902108000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -