Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_A09
         (762 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   2.0  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    22   4.6  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   8.1  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +1

Query: 565 LPEDEEEYLTKEFSSVYEDAQCERLSNMTKNEL 663
           LPEDEEE   +E      +  C+ + ++  N++
Sbjct: 540 LPEDEEEKKKREEDKAKFEGLCKVMKSILDNKV 572


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = +1

Query: 583 EYLTKEFSSVYEDAQCERLSNMTKNELIQEYLL 681
           +YL   F + Y D + +R +   +N+   +YL+
Sbjct: 26  KYLRTNFPNFYNDFEVQRYTWKCENQKCVKYLV 58


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
 Frame = -2

Query: 149 FFSVNYRRTINTNSTLIYMTKKLQLNQQYEFFLSRSTLF-STARTTILFI 3
           FF +N R  +  ++ +I     +     YE  LS   LF   A  T+LFI
Sbjct: 311 FFELNRRTILGVSNAVITFLIVMVQKASYEK-LSPVVLFIQVAADTVLFI 359


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.314    0.130    0.374 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,033
Number of Sequences: 336
Number of extensions: 3240
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)