Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_A09
(762 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L23646-8|AAM48530.1| 411|Caenorhabditis elegans Hypothetical pr... 30 1.6
AF078157-14|AAG24081.1| 348|Caenorhabditis elegans Serpentine r... 30 2.1
AL117202-7|CAB55070.1| 302|Caenorhabditis elegans Hypothetical ... 29 2.7
AF067211-5|AAW88420.1| 329|Caenorhabditis elegans Serpentine re... 29 4.8
AL110487-5|CAB54428.1| 237|Caenorhabditis elegans Hypothetical ... 28 6.3
AF271359-1|AAF75788.1| 497|Caenorhabditis elegans STE20-like ki... 28 6.3
AC006630-2|ABD63233.1| 495|Caenorhabditis elegans Hypothetical ... 28 6.3
AC006630-1|ABD63234.1| 497|Caenorhabditis elegans Hypothetical ... 28 6.3
Z83106-4|CAB05496.1| 343|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z22181-5|CAA80183.1| 619|Caenorhabditis elegans Hypothetical pr... 28 8.3
U61947-10|AAB03132.1| 932|Caenorhabditis elegans Kinesin-like p... 28 8.3
AY519856-1|AAR89637.1| 1440|Caenorhabditis elegans nematode poly... 28 8.3
AY211948-1|AAO34669.1| 932|Caenorhabditis elegans kinesin-like ... 28 8.3
AF106581-1|AAC78208.1| 1440|Caenorhabditis elegans Nematode poly... 28 8.3
AF067216-8|AAN84852.1| 954|Caenorhabditis elegans Hypothetical ... 28 8.3
AF067216-7|AAC17521.1| 1262|Caenorhabditis elegans Hypothetical ... 28 8.3
AF022967-9|AAB69881.2| 205|Caenorhabditis elegans Hypothetical ... 28 8.3
AB033538-1|BAB19356.2| 930|Caenorhabditis elegans kinesin like ... 28 8.3
>L23646-8|AAM48530.1| 411|Caenorhabditis elegans Hypothetical
protein F44E2.7c protein.
Length = 411
Score = 30.3 bits (65), Expect = 1.6
Identities = 22/95 (23%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Frame = +1
Query: 472 PENAFNILQTPSARTRDSSFSVDSDDNYFYALPEDEEEYLTKEFSSVYEDAQCERLSNMT 651
P+ IL P++ S + +SDD+Y+ + EDE+ + V + + +
Sbjct: 19 PDEGSEILSVPASPMSRESRNRNSDDDYYDYVYEDEKP--KRRRIDVEQSRRSVAAAAEK 76
Query: 652 KNELIQEY-LLLEAKFENLVKRTERSKMKRMEEDK 753
+L++E EA++E K E+ K K +++++
Sbjct: 77 HRKLLEEQRRKAEAEYERKRKADEKKKEKAIKDEE 111
>AF078157-14|AAG24081.1| 348|Caenorhabditis elegans Serpentine
receptor, class h protein92 protein.
Length = 348
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -1
Query: 402 FTKAIISFRFFVSPPITPSFYKRRHNFTFGIRASPFLF 289
FTK S +F P + F+ +F FGI ++P++F
Sbjct: 52 FTKTPSSMKFIKFPLLLSHFWSMMLDFWFGILSTPYIF 89
>AL117202-7|CAB55070.1| 302|Caenorhabditis elegans Hypothetical
protein Y47D3A.10 protein.
Length = 302
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2
Query: 218 RNHQWSGRHPSLKNRNRLALTETSKRK 298
+N QW+ PS KN A+TET RK
Sbjct: 63 QNQQWTPFAPSTKNSKLSAITETEHRK 89
>AF067211-5|AAW88420.1| 329|Caenorhabditis elegans Serpentine
receptor, class z protein85, isoform b protein.
Length = 329
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/62 (25%), Positives = 30/62 (48%)
Frame = +2
Query: 392 AFVKLF*RKLMPRSTIINF*WKFTNLNPKMRSIYFRRLQHALVIPVLV*IQMITIFMLCL 571
A + F +M TI+ F +N ++ + + H V+ ++ + ++TIFM CL
Sbjct: 18 ALISFFWLSIMLYLTILPFYLYVHKVNRQLEMTFPSIIHHFFVMVIMSYVLLLTIFMSCL 77
Query: 572 KT 577
T
Sbjct: 78 LT 79
>AL110487-5|CAB54428.1| 237|Caenorhabditis elegans Hypothetical
protein Y39E4B.6 protein.
Length = 237
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +1
Query: 514 TRDSSFSVDSDDNYFYALPEDE-EEYLTKEFSSVYEDAQCERLSNMTKNELIQEYL 678
T + F D +++ E E + + +EF + Y + + ER+ +MT+++L E L
Sbjct: 126 TTTADFGSDDNNDLDSTSGESEADREMEREFETDYLEVKRERIQSMTRSQLAAELL 181
>AF271359-1|AAF75788.1| 497|Caenorhabditis elegans STE20-like
kinase MST protein.
Length = 497
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +1
Query: 559 YALPEDEEEYLTKEFSSVYEDAQCERLSNMTKNELIQEYLLLEAKFENLVKRTERS-KMK 735
Y + E EY + F D E L N+T +ELI+ L+++ E ++ +R K K
Sbjct: 424 YNMMNTEAEYENR-FQRAVVDGDFEFLRNITLDELIRRKESLDSEMEEEIRELQRRYKTK 482
Query: 736 R 738
R
Sbjct: 483 R 483
>AC006630-2|ABD63233.1| 495|Caenorhabditis elegans Hypothetical
protein F14H12.4a protein.
Length = 495
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +1
Query: 559 YALPEDEEEYLTKEFSSVYEDAQCERLSNMTKNELIQEYLLLEAKFENLVKRTERS-KMK 735
Y + E EY + F D E L N+T +ELI+ L+++ E ++ +R K K
Sbjct: 422 YNMMNTEAEYENR-FQRAVVDGDFEFLRNITLDELIRRKESLDSEMEEEIRELQRRYKTK 480
Query: 736 R 738
R
Sbjct: 481 R 481
>AC006630-1|ABD63234.1| 497|Caenorhabditis elegans Hypothetical
protein F14H12.4b protein.
Length = 497
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +1
Query: 559 YALPEDEEEYLTKEFSSVYEDAQCERLSNMTKNELIQEYLLLEAKFENLVKRTERS-KMK 735
Y + E EY + F D E L N+T +ELI+ L+++ E ++ +R K K
Sbjct: 424 YNMMNTEAEYENR-FQRAVVDGDFEFLRNITLDELIRRKESLDSEMEEEIRELQRRYKTK 482
Query: 736 R 738
R
Sbjct: 483 R 483
>Z83106-4|CAB05496.1| 343|Caenorhabditis elegans Hypothetical
protein F22B8.5 protein.
Length = 343
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 553 YFYALPEDEEEYLTKEFSSVYE 618
YF+A+ E EYL+KE S YE
Sbjct: 158 YFFAMDEFSMEYLSKEISLRYE 179
>Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical protein
F47A4.2 protein.
Length = 3498
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +1
Query: 559 YALPEDEEEYLTKEFSSVYEDAQCERLSNMTKNE--LIQEYLLLEAKFENLVKRTERSKM 732
YA + E L ++ ER+ +NE + QE + LEA+ ++R E ++
Sbjct: 2619 YAAEQQRLELLRRQEEERLRKEAEERMRIQRENEERVRQEQMRLEAEERERIRRAEEERI 2678
Query: 733 KRMEEDK 753
++ EDK
Sbjct: 2679 QKELEDK 2685
>Z22181-5|CAA80183.1| 619|Caenorhabditis elegans Hypothetical
protein ZK632.6 protein.
Length = 619
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +1
Query: 466 PEPENAFNILQTPSARTRDSSFSVDSDDNYFYALPEDEEEYLTKEFS 606
PEP++ + SA + SS + + DD + +PE+E T+EF+
Sbjct: 556 PEPQDEEENAEQQSANSSQSSAAEEEDDE--HVVPENEPVKPTEEFA 600
>U61947-10|AAB03132.1| 932|Caenorhabditis elegans Kinesin-like
protein protein 18 protein.
Length = 932
Score = 27.9 bits (59), Expect = 8.3
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 8/84 (9%)
Frame = +1
Query: 514 TRDSSFSVDSDDNYFYALPE-----DE-EEYLTKEFSSVYEDAQCERLSNMTKNELIQ-E 672
TR+ + D + +Y A+ E DE E + EF+S ++A+ E+L T+N ++ E
Sbjct: 335 TRNEVMTGDQESSYKKAIQELRQEVDETREKVRTEFASQLDEAEVEQLRLKTENNSLRLE 394
Query: 673 YLLLEAKFE-NLVKRTERSKMKRM 741
+ L AK++ L+K T S+ +++
Sbjct: 395 NVDLRAKYDFALLKYTIGSENEQI 418
>AY519856-1|AAR89637.1| 1440|Caenorhabditis elegans nematode
polyprotein allergen related,post-translationnally
cleaved, the diverse 14.5 kDa cleavageproducts bind
lipids and retinol (164.6 kD) protein.
Length = 1440
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +1
Query: 466 PEPENAFNILQTPSARTRDSSFSVDSDDNYFYALPEDEEEYLTKEF 603
PE N L+T +DS D YF LP D+++ LT+EF
Sbjct: 411 PEQLGDINALKTAG---KDSEIQ-DKVKEYFALLPSDQQKTLTEEF 452
>AY211948-1|AAO34669.1| 932|Caenorhabditis elegans kinesin-like
protein-18 protein.
Length = 932
Score = 27.9 bits (59), Expect = 8.3
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 8/84 (9%)
Frame = +1
Query: 514 TRDSSFSVDSDDNYFYALPE-----DE-EEYLTKEFSSVYEDAQCERLSNMTKNELIQ-E 672
TR+ + D + +Y A+ E DE E + EF+S ++A+ E+L T+N ++ E
Sbjct: 335 TRNEVMTGDQESSYKKAIQELRQEVDETREKVRTEFASQLDEAEVEQLRLKTENNSLRLE 394
Query: 673 YLLLEAKFE-NLVKRTERSKMKRM 741
+ L AK++ L+K T S+ +++
Sbjct: 395 NVDLRAKYDFALLKYTIGSENEQI 418
>AF106581-1|AAC78208.1| 1440|Caenorhabditis elegans Nematode
polyprotein allergen relatedprotein 1, isoform a
protein.
Length = 1440
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +1
Query: 466 PEPENAFNILQTPSARTRDSSFSVDSDDNYFYALPEDEEEYLTKEF 603
PE N L+T +DS D YF LP D+++ LT+EF
Sbjct: 411 PEQLGDINALKTAG---KDSEIQ-DKVKEYFALLPSDQQKTLTEEF 452
>AF067216-8|AAN84852.1| 954|Caenorhabditis elegans Hypothetical
protein C35E7.5b protein.
Length = 954
Score = 27.9 bits (59), Expect = 8.3
Identities = 21/72 (29%), Positives = 35/72 (48%)
Frame = +1
Query: 544 DDNYFYALPEDEEEYLTKEFSSVYEDAQCERLSNMTKNELIQEYLLLEAKFENLVKRTER 723
DD+ EDEEEY ++ ED E + ++E +EY E+++E+ E
Sbjct: 874 DDSDCLDEDEDEEEYEDEDEEESEEDEDEEEDEDSEEDEDEEEYEDEESEYED----EEE 929
Query: 724 SKMKRMEEDKDN 759
+ + EE K+N
Sbjct: 930 DEEEEEEEGKEN 941
>AF067216-7|AAC17521.1| 1262|Caenorhabditis elegans Hypothetical
protein C35E7.5a protein.
Length = 1262
Score = 27.9 bits (59), Expect = 8.3
Identities = 21/72 (29%), Positives = 35/72 (48%)
Frame = +1
Query: 544 DDNYFYALPEDEEEYLTKEFSSVYEDAQCERLSNMTKNELIQEYLLLEAKFENLVKRTER 723
DD+ EDEEEY ++ ED E + ++E +EY E+++E+ E
Sbjct: 874 DDSDCLDEDEDEEEYEDEDEEESEEDEDEEEDEDSEEDEDEEEYEDEESEYED----EEE 929
Query: 724 SKMKRMEEDKDN 759
+ + EE K+N
Sbjct: 930 DEEEEEEEGKEN 941
>AF022967-9|AAB69881.2| 205|Caenorhabditis elegans Hypothetical
protein C13A2.11 protein.
Length = 205
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 193 LIIEDGEPTQSPVVGAPSIVEKQKPASVDG 282
LI + T SP++ PSI+ Q+P DG
Sbjct: 43 LIKQTNRLTSSPLIKIPSIIHVQRPIGKDG 72
>AB033538-1|BAB19356.2| 930|Caenorhabditis elegans kinesin like
protein KLP-18 protein.
Length = 930
Score = 27.9 bits (59), Expect = 8.3
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 8/84 (9%)
Frame = +1
Query: 514 TRDSSFSVDSDDNYFYALPE-----DE-EEYLTKEFSSVYEDAQCERLSNMTKNELIQ-E 672
TR+ + D + +Y A+ E DE E + EF+S ++A+ E+L T+N ++ E
Sbjct: 333 TRNEVMTGDQESSYKKAIQELRQEVDETREKVRTEFASQLDEAEVEQLRLKTENNSLRLE 392
Query: 673 YLLLEAKFE-NLVKRTERSKMKRM 741
+ L AK++ L+K T S+ +++
Sbjct: 393 NVDLRAKYDFALLKYTIGSENEQI 416
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.314 0.130 0.374
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,427,889
Number of Sequences: 27780
Number of extensions: 307872
Number of successful extensions: 692
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 651
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 692
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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