Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_A07
         (858 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    25   0.77 
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    25   0.77 
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    25   0.77 
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   4.1  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   4.1  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      22   5.4  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   9.4  

>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 25.0 bits (52), Expect = 0.77
 Identities = 14/63 (22%), Positives = 32/63 (50%)
 Frame = +2

Query: 17  RLSTFSTIRLIRLILVLQKDNLVLFFQSTTIKINLTK*QRLNKFLLHAVATRDQSCIWIL 196
           ++  +ST+R I L++ +  D ++L     TI   +TK  +  K L +    R+ +  +++
Sbjct: 46  KIPFYSTLRPINLLVQIILDVILLILNVHTILTTITKRNQWCKLLENLKLDRENNSSFVV 105

Query: 197 VTL 205
             +
Sbjct: 106 ANV 108


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 25.0 bits (52), Expect = 0.77
 Identities = 14/63 (22%), Positives = 32/63 (50%)
 Frame = +2

Query: 17  RLSTFSTIRLIRLILVLQKDNLVLFFQSTTIKINLTK*QRLNKFLLHAVATRDQSCIWIL 196
           ++  +ST+R I L++ +  D ++L     TI   +TK  +  K L +    R+ +  +++
Sbjct: 46  KIPFYSTLRPINLLVQIILDVILLILNVHTILTTITKRNQWCKLLENLKLDRENNSSFVV 105

Query: 197 VTL 205
             +
Sbjct: 106 ANV 108


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 25.0 bits (52), Expect = 0.77
 Identities = 14/63 (22%), Positives = 32/63 (50%)
 Frame = +2

Query: 17  RLSTFSTIRLIRLILVLQKDNLVLFFQSTTIKINLTK*QRLNKFLLHAVATRDQSCIWIL 196
           ++  +ST+R I L++ +  D ++L     TI   +TK  +  K L +    R+ +  +++
Sbjct: 366 KIPFYSTLRPINLLVQIILDVILLILNVHTILTTITKRNQWCKLLENLKLDRENNSSFVV 425

Query: 197 VTL 205
             +
Sbjct: 426 ANV 428


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 15/46 (32%), Positives = 21/46 (45%)
 Frame = -1

Query: 297 FKCSNPVTSFTLS*HRLAIFAGRNQIISVFCNVTKIQMHDWSRVAT 160
           F  + P+  FT++  R   F   N   SV      IQ HD + +AT
Sbjct: 327 FMTNTPLEVFTITPGRRYRFRMINSFASVCPAQLTIQGHDLTLIAT 372


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 15/46 (32%), Positives = 21/46 (45%)
 Frame = -1

Query: 297 FKCSNPVTSFTLS*HRLAIFAGRNQIISVFCNVTKIQMHDWSRVAT 160
           F  + P+  FT++  R   F   N   SV      IQ HD + +AT
Sbjct: 327 FMTNTPLEVFTITPGRRYRFRMINSFASVCPAQLTIQGHDLTLIAT 372


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -2

Query: 413 WTISPYRASHNFAVKSAAPLAAKFAFCVS 327
           W     RA  + +VKS +  AAK+  C S
Sbjct: 84  WVYYESRAHIHCSVKSESSQAAKYGGCFS 112


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 5/12 (41%), Positives = 9/12 (75%)
 Frame = -1

Query: 756 KRYVCTVCNSQY 721
           KR+ C +CN ++
Sbjct: 373 KRFACPICNKRF 384


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 219,325
Number of Sequences: 336
Number of extensions: 5138
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23763101
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)