Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_A07
(858 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 235 3e-62
At1g52730.2 68414.m05959 transducin family protein / WD-40 repea... 231 6e-61
At1g52730.1 68414.m05958 transducin family protein / WD-40 repea... 231 6e-61
At1g15470.1 68414.m01860 transducin family protein / WD-40 repea... 228 4e-60
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 91 7e-19
At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 91 1e-18
At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 91 1e-18
At2g46280.3 68415.m05757 eukaryotic translation initiation facto... 88 8e-18
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 75 8e-14
At1g10580.1 68414.m01192 transducin family protein / WD-40 repea... 72 6e-13
At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5 ... 71 7e-13
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 70 2e-12
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 70 2e-12
At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochro... 67 1e-11
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 66 3e-11
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 65 5e-11
At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5 ... 64 1e-10
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 64 1e-10
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 62 3e-10
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 62 6e-10
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 62 6e-10
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 62 6e-10
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 61 1e-09
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 61 1e-09
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 60 1e-09
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 60 2e-09
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 60 2e-09
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 59 4e-09
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 59 4e-09
At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogene... 58 6e-09
At4g04940.1 68417.m00718 transducin family protein / WD-40 repea... 58 1e-08
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 57 2e-08
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 56 2e-08
At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1) ide... 56 4e-08
At1g79990.1 68414.m09356 coatomer protein complex, subunit beta ... 56 4e-08
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 56 4e-08
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 55 5e-08
At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochro... 55 5e-08
At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochro... 55 5e-08
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 55 5e-08
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 55 5e-08
At2g47990.1 68415.m06006 transducin family protein / WD-40 repea... 55 7e-08
At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 55 7e-08
At1g04140.2 68414.m00404 transducin family protein / WD-40 repea... 55 7e-08
At1g04140.1 68414.m00403 transducin family protein / WD-40 repea... 55 7e-08
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 54 9e-08
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 54 2e-07
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 54 2e-07
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 54 2e-07
At5g52250.1 68418.m06485 transducin family protein / WD-40 repea... 53 2e-07
At3g49180.1 68416.m05375 transducin family protein / WD-40 repea... 53 2e-07
At3g15980.3 68416.m02022 coatomer protein complex, subunit beta ... 53 2e-07
At3g15980.2 68416.m02021 coatomer protein complex, subunit beta ... 53 2e-07
At3g15980.1 68416.m02020 coatomer protein complex, subunit beta ... 53 2e-07
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 53 3e-07
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 52 4e-07
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 52 4e-07
At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 ... 52 4e-07
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 52 6e-07
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 51 9e-07
At2g01330.1 68415.m00050 transducin family protein / WD-40 repea... 51 9e-07
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 50 1e-06
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 50 1e-06
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 50 1e-06
At3g18860.2 68416.m02396 transducin family protein / WD-40 repea... 50 2e-06
At3g18860.1 68416.m02395 transducin family protein / WD-40 repea... 50 2e-06
At1g20540.1 68414.m02559 transducin family protein / WD-40 repea... 50 3e-06
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 49 5e-06
At4g29830.1 68417.m04246 transducin family protein / WD-40 repea... 48 8e-06
At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochro... 48 1e-05
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 48 1e-05
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 48 1e-05
At5g43930.1 68418.m05374 transducin family protein / WD-40 repea... 47 1e-05
At5g10940.1 68418.m01269 transducin family protein / WD-40 repea... 46 3e-05
At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 46 4e-05
At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 46 4e-05
At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 46 4e-05
At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 46 4e-05
At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 46 4e-05
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 45 6e-05
At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pf... 45 7e-05
At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pf... 45 7e-05
At5g23730.1 68418.m02782 transducin family protein / WD-40 repea... 44 1e-04
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 44 2e-04
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 43 2e-04
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 43 2e-04
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 43 2e-04
At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10... 43 2e-04
At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10... 43 2e-04
At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pf... 43 3e-04
At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6 ... 42 4e-04
At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pf... 42 4e-04
At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pf... 42 4e-04
At1g04510.1 68414.m00442 transducin family protein / WD-40 repea... 42 4e-04
At4g32990.1 68417.m04692 transducin family protein / WD-40 repea... 42 5e-04
At2g34260.1 68415.m04191 transducin family protein / WD-40 repea... 42 5e-04
At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 ... 41 0.001
At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 ... 41 0.001
At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pf... 41 0.001
At5g14530.1 68418.m01703 transducin family protein / WD-40 repea... 41 0.001
At4g03020.1 68417.m00410 transducin family protein / WD-40 repea... 41 0.001
At1g80670.1 68414.m09466 transducin family protein / WD-40 repea... 41 0.001
At4g01860.2 68417.m00244 transducin family protein / WD-40 repea... 41 0.001
At4g01860.1 68417.m00243 transducin family protein / WD-40 repea... 41 0.001
At5g60940.2 68418.m07645 transducin family protein / WD-40 repea... 40 0.002
At5g60940.1 68418.m07644 transducin family protein / WD-40 repea... 40 0.002
At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10... 40 0.002
At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 ... 40 0.002
At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 ... 40 0.002
At3g05090.2 68416.m00553 transducin family protein / WD-40 repea... 40 0.003
At3g05090.1 68416.m00552 transducin family protein / WD-40 repea... 40 0.003
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 39 0.004
At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pf... 38 0.006
At5g50120.1 68418.m06207 transducin family protein / WD-40 repea... 38 0.006
At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3 pro... 38 0.006
At2g34260.2 68415.m04192 transducin family protein / WD-40 repea... 38 0.006
At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4 pro... 38 0.009
At4g05410.1 68417.m00823 transducin family protein / WD-40 repea... 38 0.009
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 38 0.009
At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 38 0.009
At5g66240.2 68418.m08345 transducin family protein / WD-40 repea... 38 0.011
At5g66240.1 68418.m08344 transducin family protein / WD-40 repea... 38 0.011
At5g15550.2 68418.m01821 transducin family protein / WD-40 repea... 38 0.011
At5g15550.1 68418.m01820 transducin family protein / WD-40 repea... 38 0.011
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 38 0.011
At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat fam... 37 0.015
At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 ... 37 0.015
At4g00090.1 68417.m00009 transducin family protein / WD-40 repea... 37 0.015
At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 ... 37 0.015
At1g27840.1 68414.m03412 transducin family protein / WD-40 repea... 37 0.015
At1g24530.1 68414.m03088 transducin family protein / WD-40 repea... 37 0.015
At3g50390.1 68416.m05512 transducin family protein / WD-40 repea... 37 0.020
At2g40360.1 68415.m04977 transducin family protein / WD-40 repea... 37 0.020
At2g19430.1 68415.m02267 transducin family protein / WD-40 repea... 37 0.020
At4g38480.1 68417.m05438 transducin family protein / WD-40 repea... 36 0.035
At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6 ... 36 0.035
At4g28450.1 68417.m04071 transducin family protein / WD-40 repea... 36 0.046
At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2 ... 36 0.046
At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2 pro... 35 0.060
At4g21130.1 68417.m03055 transducin family protein / WD-40 repea... 35 0.060
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 35 0.060
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 35 0.080
At4g35140.1 68417.m04996 transducin family protein / WD-40 repea... 35 0.080
At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pf... 35 0.080
At5g58760.1 68418.m07360 transducin family protein / WD-40 repea... 34 0.11
At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pf... 34 0.11
At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pf... 34 0.11
At1g03110.1 68414.m00288 transducin family protein / WD-40 repea... 34 0.11
At4g29380.1 68417.m04197 protein kinase family protein / WD-40 r... 34 0.14
At4g35370.1 68417.m05025 transducin family protein / WD-40 repea... 33 0.18
At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1 pro... 33 0.18
At2g46560.1 68415.m05808 transducin family protein / WD-40 repea... 33 0.18
At3g42660.1 68416.m04436 transducin family protein / WD-40 repea... 33 0.24
At5g50650.1 68418.m06276 WD-40 repeat family protein / St12p pro... 33 0.32
At5g50550.1 68418.m06260 WD-40 repeat family protein / St12p pro... 33 0.32
At4g18905.1 68417.m02787 transducin family protein / WD-40 repea... 33 0.32
At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pf... 33 0.32
At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 ... 33 0.32
At1g24130.1 68414.m03044 transducin family protein / WD-40 repea... 33 0.32
At3g45620.1 68416.m04927 transducin family protein / WD-40 repea... 32 0.42
At2g03280.1 68415.m00282 expressed protein contains Pfam PF03138... 32 0.42
At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6 ... 32 0.56
At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6 ... 32 0.56
At4g18900.1 68417.m02786 transducin family protein / WD-40 repea... 32 0.56
At3g10530.1 68416.m01264 transducin family protein / WD-40 repea... 32 0.56
At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 31 0.74
At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5 ... 31 0.98
At5g05970.1 68418.m00661 transducin family protein / WD-40 repea... 31 1.3
At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-rel... 31 1.3
At3g21060.1 68416.m02662 transducin family protein / WD-40 repea... 31 1.3
At2g20330.1 68415.m02374 transducin family protein / WD-40 repea... 31 1.3
At2g16405.1 68415.m01878 transducin family protein / WD-40 repea... 31 1.3
At5g41960.1 68418.m05109 expressed protein 29 3.0
At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pf... 29 3.0
At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6 ... 29 3.0
At3g54210.1 68416.m05992 ribosomal protein L17 family protein co... 29 3.0
At1g65030.1 68414.m07371 transducin family protein / WD-40 repea... 29 3.0
At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-rel... 29 3.0
At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5 ... 29 4.0
At5g50640.1 68418.m06274 CBS domain-containing protein / octicos... 29 4.0
At5g50530.1 68418.m06258 CBS domain-containing protein / octicos... 29 4.0
At3g06880.1 68416.m00817 transducin family protein / WD-40 repea... 29 4.0
At1g76910.1 68414.m08953 hypothetical protein 29 4.0
At1g64350.1 68414.m07292 transducin family protein / WD-40 repea... 29 4.0
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 29 5.2
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 29 5.2
At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pf... 29 5.2
At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5 ... 29 5.2
At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetica... 29 5.2
At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetica... 29 5.2
At2g14080.1 68415.m01566 disease resistance protein (TIR-NBS-LRR... 29 5.2
At1g76780.1 68414.m08935 expressed protein ; expression supporte... 29 5.2
At1g65850.1 68414.m07472 disease resistance protein (TIR-NBS-LRR... 29 5.2
At1g08060.2 68414.m00881 MOM1 identical to MOM1 (mutation in a '... 29 5.2
At1g08060.1 68414.m00880 MOM1 identical to MOM1 (mutation in a '... 29 5.2
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 28 6.9
At5g17370.1 68418.m02036 WD-40 repeat family protein contains 1 ... 28 6.9
At4g29860.1 68417.m04250 transducin family protein / WD-40 repea... 28 6.9
At1g29260.1 68414.m03578 peroxisomal targeting signal type 2 rec... 28 6.9
At1g19750.1 68414.m02469 transducin family protein / WD-40 repea... 28 6.9
At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8 ... 28 9.1
At4g30250.1 68417.m04301 AAA-type ATPase family protein contains... 28 9.1
At3g56990.1 68416.m06344 glycine-rich protein conserved hypothet... 28 9.1
At2g45330.1 68415.m05641 tRNA 2'phosphotransferase, putative con... 28 9.1
At1g20840.1 68414.m02611 transporter-related low similarity to D... 28 9.1
At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-rel... 28 9.1
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 235 bits (575), Expect = 3e-62
Identities = 117/240 (48%), Positives = 159/240 (66%), Gaps = 3/240 (1%)
Frame = +1
Query: 148 PLTCGGHTRPVVHLDFSDVTKDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVA 327
PL C GH+RPVV L +S +T DG++LISA KD +PMLR GETGDWIGTFEGHKGAVW
Sbjct: 9 PLVCHGHSRPVVDLFYSPITPDGFFLISASKDSQPMLRNGETGDWIGTFEGHKGAVWSSC 68
Query: 328 LTQNANLAASGAADFTAKLWDARYGDMVHTFEHEHIVKSVNFNADDTLLVTASNEKLIRV 507
L NA AAS +ADF+AKLWDA GD++H+FEH+HIV++ F+ D L+T EK++RV
Sbjct: 69 LDNNALRAASASADFSAKLWDALTGDVLHSFEHKHIVRACAFSQDTKYLITGGFEKILRV 128
Query: 508 FDLNKLEAGPIEKINGHTSSIRHAVFLNNSRIV--SVSDDNTMRVWDRNSGEEVQKVEFQ 681
FDLN+L+A P E I+ SIR +L+ + + S +D +R+WD SG+ VQ +E +
Sbjct: 129 FDLNRLDAPPTE-IDKSPGSIRTLTWLHGDQTILSSCTDIGGVRLWDVRSGKIVQTLETK 187
Query: 682 SVPNSLXLSRDGAILTVAHGTNVSFYTSDTMRKLREFPVPTKCYSASLAPXRAT-FVCGG 858
S S +S+DG +T A G+ V F+ ++ ++ + +P SASL P FV GG
Sbjct: 188 SPVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYDMPCNIESASLEPKSGNKFVAGG 247
Score = 31.9 bits (69), Expect = 0.56
Identities = 19/60 (31%), Positives = 26/60 (43%)
Frame = +1
Query: 208 KDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALTQNANLAASGAADFTAKLW 387
K G ++ +D L TG IG +GH G V V ASG+ D T ++W
Sbjct: 238 KSGNKFVAGGEDMWVRLFDFHTGKEIGCNKGHHGPVHCVRFAPTGESYASGSEDGTIRIW 297
>At1g52730.2 68414.m05959 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 231 bits (564), Expect = 6e-61
Identities = 114/241 (47%), Positives = 159/241 (65%), Gaps = 3/241 (1%)
Frame = +1
Query: 145 VPLTCGGHTRPVVHLDFSDVTKDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGV 324
+P C GH+RPVV L +S +T DG++LISA KD PMLR GETGDWIGTFEGHKGAVW
Sbjct: 8 IPQVCHGHSRPVVDLFYSPITPDGFFLISASKDSHPMLRNGETGDWIGTFEGHKGAVWSS 67
Query: 325 ALTQNANLAASGAADFTAKLWDARYGDMVHTFEHEHIVKSVNFNADDTLLVTASNEKLIR 504
L NA AAS +ADF+AKLWDA GD++H+FEH+HIV++ F+ D L+T EK++R
Sbjct: 68 CLDNNALRAASASADFSAKLWDALTGDVLHSFEHKHIVRACAFSEDTKSLLTGGFEKILR 127
Query: 505 VFDLNKLEAGPIEKINGHTSSIRHAVFLNNSRIV--SVSDDNTMRVWDRNSGEEVQKVEF 678
VFD+N+L+A P E ++ SIR +L++ + + S +D +R+WD SG+ VQ +E
Sbjct: 128 VFDMNRLDAPPTE-VDKSPGSIRTLTWLHSDQTILSSCTDIGGVRLWDVRSGKIVQTLET 186
Query: 679 QSVPNSLXLSRDGAILTVAHGTNVSFYTSDTMRKLREFPVPTKCYSASLAPXRA-TFVCG 855
+S S +S+DG +T A G+ V F+ ++ ++ + +P SASL P FV G
Sbjct: 187 KSPVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYDMPCNIESASLEPKSGEKFVAG 246
Query: 856 G 858
G
Sbjct: 247 G 247
Score = 32.3 bits (70), Expect = 0.42
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +1
Query: 271 TGDWIGTFEGHKGAVWGVALTQNANLAASGAADFTAKLW 387
TG+ IG +GH G V V T ASG+ D T ++W
Sbjct: 259 TGEEIGCNKGHHGPVHCVRFTPTGLSYASGSEDGTIRIW 297
>At1g52730.1 68414.m05958 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 231 bits (564), Expect = 6e-61
Identities = 114/241 (47%), Positives = 159/241 (65%), Gaps = 3/241 (1%)
Frame = +1
Query: 145 VPLTCGGHTRPVVHLDFSDVTKDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGV 324
+P C GH+RPVV L +S +T DG++LISA KD PMLR GETGDWIGTFEGHKGAVW
Sbjct: 8 IPQVCHGHSRPVVDLFYSPITPDGFFLISASKDSHPMLRNGETGDWIGTFEGHKGAVWSS 67
Query: 325 ALTQNANLAASGAADFTAKLWDARYGDMVHTFEHEHIVKSVNFNADDTLLVTASNEKLIR 504
L NA AAS +ADF+AKLWDA GD++H+FEH+HIV++ F+ D L+T EK++R
Sbjct: 68 CLDNNALRAASASADFSAKLWDALTGDVLHSFEHKHIVRACAFSEDTKSLLTGGFEKILR 127
Query: 505 VFDLNKLEAGPIEKINGHTSSIRHAVFLNNSRIV--SVSDDNTMRVWDRNSGEEVQKVEF 678
VFD+N+L+A P E ++ SIR +L++ + + S +D +R+WD SG+ VQ +E
Sbjct: 128 VFDMNRLDAPPTE-VDKSPGSIRTLTWLHSDQTILSSCTDIGGVRLWDVRSGKIVQTLET 186
Query: 679 QSVPNSLXLSRDGAILTVAHGTNVSFYTSDTMRKLREFPVPTKCYSASLAPXRA-TFVCG 855
+S S +S+DG +T A G+ V F+ ++ ++ + +P SASL P FV G
Sbjct: 187 KSPVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYDMPCNIESASLEPKSGEKFVAG 246
Query: 856 G 858
G
Sbjct: 247 G 247
Score = 32.3 bits (70), Expect = 0.42
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +1
Query: 271 TGDWIGTFEGHKGAVWGVALTQNANLAASGAADFTAKLW 387
TG+ IG +GH G V V T ASG+ D T ++W
Sbjct: 259 TGEEIGCNKGHHGPVHCVRFTPTGLSYASGSEDGTIRIW 297
>At1g15470.1 68414.m01860 transducin family protein / WD-40 repeat
family protein Strong similarity to gb AF096285
serine-threonine kinase receptor-associated protein from
Mus musculus and contains 5 PF|00400 WD40, G-beta repeat
domains. EST gb|F14050 comes from this gene
Length = 333
Score = 228 bits (557), Expect = 4e-60
Identities = 112/240 (46%), Positives = 158/240 (65%), Gaps = 3/240 (1%)
Frame = +1
Query: 148 PLTCGGHTRPVVHLDFSDVTKDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVA 327
PL C GH+RPVV + +S VT DG++LISA KD PMLR GETGDWIGTFEGHKGAVW +
Sbjct: 4 PLVCHGHSRPVVDVAYSPVTPDGFFLISASKDSNPMLRNGETGDWIGTFEGHKGAVWSCS 63
Query: 328 LTQNANLAASGAADFTAKLWDARYGDMVHTFEHEHIVKSVNFNADDTLLVTASNEKLIRV 507
L +NA AAS +ADFTAK+W+A GD +H+FEH+HIV++ F+ D L+T EK++R+
Sbjct: 64 LDKNAIRAASASADFTAKIWNALTGDELHSFEHKHIVRACAFSEDTHRLLTGGMEKILRI 123
Query: 508 FDLNKLEAGPIEKINGHTSSIRHAVFL--NNSRIVSVSDDNTMRVWDRNSGEEVQKVEFQ 681
FDLN+ +A P +++ SIR +L +N+ + S +D +R+WD S + V +E +
Sbjct: 124 FDLNRPDAPP-KEVGNSPGSIRTVEWLHSDNTILSSCTDTGDIRLWDIRSDKIVHTLETK 182
Query: 682 SVPNSLXLSRDGAILTVAHGTNVSFYTSDTMRKLREFPVPTKCYSASLAPXRA-TFVCGG 858
S S +S+DG +T A G++V F+ + L+ + +P SASL P TF+ GG
Sbjct: 183 SPVTSAEVSQDGRYITTADGSSVKFWDAKNFGLLKSYDMPCNVESASLEPKHGNTFIAGG 242
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +1
Query: 268 ETGDWIGTFEGHKGAVWGVALTQNANLAASGAADFTAKLW 387
+TG+ IG +GH G V V SG+ D T ++W
Sbjct: 253 QTGEEIGCNKGHHGPVHCVRYAPGGESYTSGSEDGTVRIW 292
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 91.5 bits (217), Expect = 7e-19
Identities = 64/254 (25%), Positives = 119/254 (46%), Gaps = 17/254 (6%)
Frame = +1
Query: 148 PLTCGGHTRPVVHLDFSDVTKDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVA 327
P+ GH RP+ L ++ ++G L S KD P + + G+ +GT+ GH GAVW
Sbjct: 30 PILMKGHERPLTFLRYN---RNGDLLFSCAKDHTPTVWFADNGERLGTYRGHSGAVWCCD 86
Query: 328 LTQNANLAASGAADFTAKLWDARYGDMVHTFEHEHIVKSVNFNADDTLLVTASNEKL--I 501
++++++ +G+AD TAKLWD + G + TF+ +SV+F+ D L V ++ +
Sbjct: 87 ISRDSSRLITGSADQTAKLWDVKSGKELFTFKFGAPARSVDFSVGDHLAVITTDHFVGTS 146
Query: 502 RVFDLNKLEAGPIEKINGHT---------SSIRHAVF-LNNSRIVSVSDDNTMRVWDRNS 651
+ ++ P +++ I AV+ N IVS +D +R+WD +
Sbjct: 147 SAIHVKRIAEDPEDQVGDSVLVLQSPDGKKKINRAVWGPLNQTIVSGGEDAAIRIWDAET 206
Query: 652 G----EEVQKVEFQSVPNSLXLSRDGA-ILTVAHGTNVSFYTSDTMRKLREFPVPTKCYS 816
G + ++V + SL + D + LT +H + T+ ++ + +
Sbjct: 207 GKLLKQSDEEVGHKEAITSLCKAADDSHFLTGSHDKTAKLWDMRTLTLIKTYTTVVPVNA 266
Query: 817 ASLAPXRATFVCGG 858
+++P V GG
Sbjct: 267 VAMSPLLNHVVLGG 280
>At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 90.6 bits (215), Expect = 1e-18
Identities = 66/254 (25%), Positives = 117/254 (46%), Gaps = 17/254 (6%)
Frame = +1
Query: 148 PLTCGGHTRPVVHLDFSDVTKDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVA 327
P+ GH RP+ L ++ ++G L S KD P L + G+ +GT+ GH GAVW
Sbjct: 3 PILMKGHERPLTFLRYN---REGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCD 59
Query: 328 LTQNANLAASGAADFTAKLWDARYGDMVHTFEHEHIVKSVNFNADDTLLVTASNEKLIR- 504
++++++ +G+AD TAKLWD + G + TF+ +SV+F D L V ++ + R
Sbjct: 60 VSRDSSRLITGSADQTAKLWDVKSGKELFTFKFNAPTRSVDFAVGDRLAVITTDHFVDRT 119
Query: 505 -VFDLNKLEAGPIEK---------INGHTSSIRHAVF-LNNSRIVSVSDDNTMRVWDRNS 651
+ ++ P E+ I AV+ N IVS +D +R+WD +
Sbjct: 120 AAIHVKRIAEDPEEQDAESVLVLHCPDGKKRINRAVWGPLNQTIVSGGEDKVIRIWDAET 179
Query: 652 GEEVQKVEFQ-----SVPNSLXLSRDGAILTVAHGTNVSFYTSDTMRKLREFPVPTKCYS 816
G+ +++ + + + + + D LT + + T+ L+ + +
Sbjct: 180 GKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWDMRTLTLLKTYTTVVPVNA 239
Query: 817 ASLAPXRATFVCGG 858
SL+P V GG
Sbjct: 240 VSLSPLLNHVVLGG 253
>At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 90.6 bits (215), Expect = 1e-18
Identities = 66/254 (25%), Positives = 117/254 (46%), Gaps = 17/254 (6%)
Frame = +1
Query: 148 PLTCGGHTRPVVHLDFSDVTKDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVA 327
P+ GH RP+ L ++ ++G L S KD P L + G+ +GT+ GH GAVW
Sbjct: 3 PILMKGHERPLTFLRYN---REGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCD 59
Query: 328 LTQNANLAASGAADFTAKLWDARYGDMVHTFEHEHIVKSVNFNADDTLLVTASNEKLIR- 504
++++++ +G+AD TAKLWD + G + TF+ +SV+F D L V ++ + R
Sbjct: 60 VSRDSSRLITGSADQTAKLWDVKSGKELFTFKFNAPTRSVDFAVGDRLAVITTDHFVDRT 119
Query: 505 -VFDLNKLEAGPIEK---------INGHTSSIRHAVF-LNNSRIVSVSDDNTMRVWDRNS 651
+ ++ P E+ I AV+ N IVS +D +R+WD +
Sbjct: 120 AAIHVKRIAEDPEEQDAESVLVLHCPDGKKRINRAVWGPLNQTIVSGGEDKVIRIWDAET 179
Query: 652 GEEVQKVEFQ-----SVPNSLXLSRDGAILTVAHGTNVSFYTSDTMRKLREFPVPTKCYS 816
G+ +++ + + + + + D LT + + T+ L+ + +
Sbjct: 180 GKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWDMRTLTLLKTYTTVVPVNA 239
Query: 817 ASLAPXRATFVCGG 858
SL+P V GG
Sbjct: 240 VSLSPLLNHVVLGG 253
>At2g46280.3 68415.m05757 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 254
Score = 87.8 bits (208), Expect = 8e-18
Identities = 63/245 (25%), Positives = 114/245 (46%), Gaps = 17/245 (6%)
Frame = +1
Query: 148 PLTCGGHTRPVVHLDFSDVTKDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVA 327
P+ GH RP+ L ++ ++G L S KD P L + G+ +GT+ GH GAVW
Sbjct: 3 PILMKGHERPLTFLRYN---REGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCD 59
Query: 328 LTQNANLAASGAADFTAKLWDARYGDMVHTFEHEHIVKSVNFNADDTLLVTASNEKLIR- 504
++++++ +G+AD TAKLWD + G + TF+ +SV+F D L V ++ + R
Sbjct: 60 VSRDSSRLITGSADQTAKLWDVKSGKELFTFKFNAPTRSVDFAVGDRLAVITTDHFVDRT 119
Query: 505 -VFDLNKLEAGPIEK---------INGHTSSIRHAVF-LNNSRIVSVSDDNTMRVWDRNS 651
+ ++ P E+ I AV+ N IVS +D +R+WD +
Sbjct: 120 AAIHVKRIAEDPEEQDAESVLVLHCPDGKKRINRAVWGPLNQTIVSGGEDKVIRIWDAET 179
Query: 652 GEEVQKVEFQ-----SVPNSLXLSRDGAILTVAHGTNVSFYTSDTMRKLREFPVPTKCYS 816
G+ +++ + + + + + D LT + + T+ L+ + +
Sbjct: 180 GKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWDMRTLTLLKTYTTVVPVNA 239
Query: 817 ASLAP 831
SL+P
Sbjct: 240 VSLSP 244
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 74.5 bits (175), Expect = 8e-14
Identities = 45/152 (29%), Positives = 84/152 (55%), Gaps = 3/152 (1%)
Frame = +1
Query: 289 TFEGHKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHTFE-HEHIVKSVNFNADD 465
T EGH A+ V + + NL AS + D T LW A ++H +E H + + +++D
Sbjct: 38 TLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSDS 97
Query: 466 TLLVTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVFLNNSR-IVSVSDDNTMRVWD 642
+AS++ +R++D + ++ + GHT+ + F S IVS S D T+R+W+
Sbjct: 98 HYTCSASDDCTLRIWDA-RSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWE 156
Query: 643 RNSGEEVQKVEFQSVP-NSLXLSRDGAILTVA 735
+G+ V+ ++ S+P +S+ +RDG+++ A
Sbjct: 157 VKTGKCVRMIKAHSMPISSVHFNRDGSLIVSA 188
Score = 73.7 bits (173), Expect = 1e-13
Identities = 50/170 (29%), Positives = 81/170 (47%), Gaps = 3/170 (1%)
Frame = +1
Query: 154 TCGGHTRPVVHLDFSDVTKDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALT 333
T GHT + + FS+ DG L SA D +L I +EGH + +A +
Sbjct: 38 TLEGHTAAISCVKFSN---DGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWS 94
Query: 334 QNANLAASGAADFTAKLWDAR--YGDMVHTFEHEHIVKSVNFNADDTLLVTASNEKLIRV 507
+++ S + D T ++WDAR Y + H + V VNFN L+V+ S ++ IR+
Sbjct: 95 SDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRI 154
Query: 508 FDLNKLEAGPIEKINGHTSSIRHAVF-LNNSRIVSVSDDNTMRVWDRNSG 654
+++ + + I H+ I F + S IVS S D + ++WD G
Sbjct: 155 WEVKTGKC--VRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEG 202
Score = 52.4 bits (120), Expect = 4e-07
Identities = 42/178 (23%), Positives = 83/178 (46%), Gaps = 7/178 (3%)
Frame = +1
Query: 163 GHTRPVVHLDFSDVTKDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALTQNA 342
GHT V ++F+ + ++S D + + +TG + + H + V ++
Sbjct: 126 GHTNFVFCVNFNPPSN---LIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDG 182
Query: 343 NLAASGAADFTAKLWDARYGDMVHTF--EHEHIVKSVNFNADDTLLVTASNEKLIRVFDL 516
+L S + D + K+WDA+ G + T + V F+ + ++ A+ + ++ L
Sbjct: 183 SLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLK---L 239
Query: 517 NKLEAGPIEKI-NGHTSS---IRHAVFLNNSR-IVSVSDDNTMRVWDRNSGEEVQKVE 675
+ G K+ GHT+ I A + N + IVS S+DN + +WD + +Q++E
Sbjct: 240 SNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLE 297
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Frame = +1
Query: 163 GHTRPVVHLDFSDVTKDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVAL--TQ 336
GHT V + + +G Y++S +D L + + + EGH AV V+ Q
Sbjct: 253 GHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVSCHPVQ 312
Query: 337 NANLAASGAADFTAKLW 387
N ++ D T ++W
Sbjct: 313 NEISSSGNHLDKTIRIW 329
>At1g10580.1 68414.m01192 transducin family protein / WD-40 repeat
family protein similar to splicing factor hPRP17
(gi|3283220); contains 7 WD-40 repeats (PF00400);similar
to ESTs emb|F15435 and dbj|AUO62661
Length = 573
Score = 71.7 bits (168), Expect = 6e-13
Identities = 50/173 (28%), Positives = 83/173 (47%), Gaps = 5/173 (2%)
Frame = +1
Query: 139 KQVPLTCGGHTRPVVHLDFSDVTKDGYYLISACKDGKPMLRQG-ETGDWIGTFEGHKGAV 315
K++ T GHT+ V + F K G+ L+SA D K + +G + T+ GH AV
Sbjct: 272 KRLVHTWSGHTKGVSAIRF--FPKQGHLLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAV 329
Query: 316 WGVALTQNANLAASGAADFTAKLWDARYGDMVHTFEHEHIVKSVNFNADD---TLLVTAS 486
+ + + + + D K WD G ++ TF I V N DD +L+
Sbjct: 330 RDICFSNDGSKFLTAGYDKNIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGM 389
Query: 487 NEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVFL-NNSRIVSVSDDNTMRVWD 642
++K I +D+N E ++ + H ++ F+ NN R V+ SDD ++RVW+
Sbjct: 390 SDKKIVQWDINTGEV--TQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWE 440
>At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI2 (SP:O22468) [Arabidopsis thaliana] WD-40
repeats (PF0400);
Length = 415
Score = 71.3 bits (167), Expect = 7e-13
Identities = 61/199 (30%), Positives = 95/199 (47%), Gaps = 14/199 (7%)
Frame = +1
Query: 163 GHTRPVVHLDFSDVTKDGYYLISACKDGKPML------RQGETGDWIGTFEGHKGAVWGV 324
GH + L +S K+GY L+S +D K L Q + + + +EGH+ A+ V
Sbjct: 166 GHDKEGYGLSWSPF-KEGY-LLSGSQDQKICLWDVSATPQDKVLNAMFVYEGHESAIADV 223
Query: 325 AL-TQNANLAASGAADFTAKLWDARYGDMVHTFE-HEHIVKSVNFNA-DDTLLVTASNEK 495
+ +N NL S D +WD R M H + HE V ++FN ++ +L TAS++
Sbjct: 224 SWHMKNENLFGSAGEDGRLVIWDTRTNQMQHQVKVHEREVNYLSFNPFNEWVLATASSDS 283
Query: 496 LIRVFDLNKLEAGPIEKINGHTSSIRHAVFLNNSRIV--SVSDDNTMRVWDRNS-GEEVQ 666
+ +FDL KL A P+ ++ H + + N V S +D + VWD N GEE
Sbjct: 284 TVALFDLRKLNA-PLHVMSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDLNRVGEEQL 342
Query: 667 KVEF--QSVPNSLXLSRDG 717
++E + P L S G
Sbjct: 343 EIELDAEDGPPELLFSHGG 361
Score = 37.1 bits (82), Expect = 0.015
Identities = 40/157 (25%), Positives = 75/157 (47%), Gaps = 20/157 (12%)
Frame = +1
Query: 229 SACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALTQ-NANLAASGAADFTAKLWDAR-YG 402
SA +DG+ ++ T + H+ V ++ N + A+ ++D T L+D R
Sbjct: 235 SAGEDGRLVIWDTRTNQMQHQVKVHEREVNYLSFNPFNEWVLATASSDSTVALFDLRKLN 294
Query: 403 DMVHTFE-HEHIVKSVNFNAD-DTLLVTASNEKLIRVFDLNKL-----------EAGPIE 543
+H HE V V ++ + +T+L ++ ++ + V+DLN++ E GP E
Sbjct: 295 APLHVMSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDLNRVGEEQLEIELDAEDGPPE 354
Query: 544 KI---NGHTSSIRHAVFLNNSR--IVSVSDDNTMRVW 639
+ GH + I + N I SV++DN+++VW
Sbjct: 355 LLFSHGGHKAKISDFAWNKNEPWVIASVAEDNSLQVW 391
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 70.1 bits (164), Expect = 2e-12
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 4/169 (2%)
Frame = +1
Query: 163 GHTRPVVHLDFSDVTKDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALTQNA 342
GH + + FS D +++SA D L ETG I T GH + V +
Sbjct: 69 GHENGISDVAFSS---DARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQS 125
Query: 343 NLAASGAADFTAKLWDARYGDMVHTF-EHEHIVKSVNFNADDTLLVTASNEKLIRVFDLN 519
N+ SG+ D T ++WD G + H V +V+FN D +L+V++S + L R++D
Sbjct: 126 NMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSG 185
Query: 520 KLEAGPIEK--INGHTSSIRHAVFLNNSRIVSVSD-DNTMRVWDRNSGE 657
G K I+ + F N + + V DNT+R+W+ +S +
Sbjct: 186 ---TGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAK 231
Score = 68.1 bits (159), Expect = 7e-12
Identities = 55/202 (27%), Positives = 92/202 (45%), Gaps = 9/202 (4%)
Frame = +1
Query: 154 TCGGHTRPVVHLDFSDVTKDGYYLISACKDGKPMLRQGET-----GDWIGTFEGHKGAVW 318
T H R V + FS DG L SA D T + + F GH+ +
Sbjct: 19 TLTSHNRAVSSVKFSS---DGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGIS 75
Query: 319 GVALTQNANLAASGAADFTAKLWDARYGDMVHT-FEHEHIVKSVNFNADDTLLVTASNEK 495
VA + +A S + D T KLWD G ++ T H + VNFN ++V+ S ++
Sbjct: 76 DVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDE 135
Query: 496 LIRVFDLNKLEAGPIEKINGHTSSIRHAVF-LNNSRIVSVSDDNTMRVWDRNSGEEVQK- 669
+R++D+ + ++ + H+ + F + S IVS S D R+WD +G V+
Sbjct: 136 TVRIWDVTTGKC--LKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTL 193
Query: 670 VEFQSVPNS-LXLSRDGAILTV 732
++ ++ P S + S +G + V
Sbjct: 194 IDDENPPVSFVRFSPNGKFILV 215
Score = 54.0 bits (124), Expect = 1e-07
Identities = 41/177 (23%), Positives = 82/177 (46%), Gaps = 6/177 (3%)
Frame = +1
Query: 163 GHTRPVVHLDFSDVTKDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALTQNA 342
GHT ++F+ + ++S D + TG + H V V ++
Sbjct: 111 GHTNYAFCVNFNPQSN---MIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDG 167
Query: 343 NLAASGAADFTAKLWDARYGDMVHTF--EHEHIVKSVNFNADDTLLVTASNEKLIRVFDL 516
+L S + D ++WD+ G V T + V V F+ + ++ + + +R++++
Sbjct: 168 SLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNI 227
Query: 517 NKLEAGPIEKINGHTSS---IRHAVFLNNS-RIVSVSDDNTMRVWDRNSGEEVQKVE 675
+ + ++ GH ++ I A + N RIVS S+DN + +W+ NS + +QK+E
Sbjct: 228 SSAKF--LKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLE 282
Score = 33.9 bits (74), Expect = 0.14
Identities = 20/78 (25%), Positives = 33/78 (42%)
Frame = +1
Query: 154 TCGGHTRPVVHLDFSDVTKDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALT 333
T GH + + +G ++S +D + + + + EGH V VA
Sbjct: 235 TYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACH 294
Query: 334 QNANLAASGAADFTAKLW 387
NL ASG+ D T ++W
Sbjct: 295 PTENLIASGSLDKTVRIW 312
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 70.1 bits (164), Expect = 2e-12
Identities = 38/128 (29%), Positives = 73/128 (57%), Gaps = 2/128 (1%)
Frame = +1
Query: 289 TFEGHKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHTFE-HEHIVKSVNFNADD 465
+F H V + ++++ + ASG+ D K+W R G + F+ H V S++F+ D
Sbjct: 258 SFMMHDDPVLCIDFSRDSEMLASGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDG 317
Query: 466 TLLVTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVFLNN-SRIVSVSDDNTMRVWD 642
+ L++ S ++ R+ L + +++ GHTS + HA+F ++ SRI++ S D T++VWD
Sbjct: 318 SQLLSTSFDQTARIHGLKSGKL--LKEFRGHTSYVNHAIFTSDGSRIITASSDCTVKVWD 375
Query: 643 RNSGEEVQ 666
+ + +Q
Sbjct: 376 SKTTDCLQ 383
Score = 44.4 bits (100), Expect = 1e-04
Identities = 26/112 (23%), Positives = 52/112 (46%)
Frame = +1
Query: 166 HTRPVVHLDFSDVTKDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALTQNAN 345
H++ V L FS +DG L+S D + ++G + F GH V T + +
Sbjct: 304 HSQGVTSLSFS---RDGSQLLSTSFDQTARIHGLKSGKLLKEFRGHTSYVNHAIFTSDGS 360
Query: 346 LAASGAADFTAKLWDARYGDMVHTFEHEHIVKSVNFNADDTLLVTASNEKLI 501
+ ++D T K+WD++ D + TF+ ++ + + + L + E ++
Sbjct: 361 RIITASSDCTVKVWDSKTTDCLQTFKPPPPLRGTDASVNSIHLFPKNTEHIV 412
>At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); similar to
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]; contains non-consensus (GC) donor splice sites
at introns 4 and 6
Length = 1017
Score = 67.3 bits (157), Expect = 1e-11
Identities = 44/143 (30%), Positives = 70/143 (48%), Gaps = 2/143 (1%)
Frame = +1
Query: 220 YLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALTQNA-NLAASGAADFTAKLWDAR 396
YL S+ DG L TG I F H+ W V ++ ASG+ D + KLW+
Sbjct: 768 YLASSDYDGIVKLWDVTTGQAISHFIEHEKRAWSVDFSEACPTKLASGSDDCSVKLWNIN 827
Query: 397 YGDMVHTFEHEHIVKSVNFNADDT-LLVTASNEKLIRVFDLNKLEAGPIEKINGHTSSIR 573
+ + T + V V F+ + LL S++ +DL L P ++GH ++
Sbjct: 828 ERNCLGTIRNIANVCCVQFSPQSSHLLAFGSSDFRTYCYDLRNLRT-PWCILSGHNKAVS 886
Query: 574 HAVFLNNSRIVSVSDDNTMRVWD 642
+A FL+N +V+ S DNT+++WD
Sbjct: 887 YAKFLDNETLVTASTDNTLKLWD 909
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 66.1 bits (154), Expect = 3e-11
Identities = 48/161 (29%), Positives = 74/161 (45%), Gaps = 2/161 (1%)
Frame = +1
Query: 208 KDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALTQNANLAASGAADFTAKLW 387
K L++ +D K L + I + GH + V + L A+GAA T KLW
Sbjct: 120 KSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLW 179
Query: 388 DARYGDMVHTFE-HEHIVKSVNFNADDTLLVTASNEKLIRVFDLNKLEAGPIEKINGHTS 564
D +V T H SVNF+ + S + ++++D+ K G I GHT
Sbjct: 180 DLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRK--KGCIHTYKGHTR 237
Query: 565 SIRHAVFLNNSR-IVSVSDDNTMRVWDRNSGEEVQKVEFQS 684
+ F + R IVS +DN ++VWD +G+ + EF+S
Sbjct: 238 GVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLH--EFKS 276
Score = 55.2 bits (127), Expect = 5e-08
Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 1/130 (0%)
Frame = +1
Query: 142 QVPLTCGGHTRPVVHLDFSDVTKDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWG 321
+V T GH V ++F G + S D + I T++GH V
Sbjct: 185 KVVRTLTGHRSNCVSVNFHPF---GEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNV 241
Query: 322 VALTQNANLAASGAADFTAKLWDARYGDMVHTFE-HEHIVKSVNFNADDTLLVTASNEKL 498
+ T + SG D K+WD G ++H F+ HE ++S++F+ + LL T S +K
Sbjct: 242 LRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHEFLLATGSADKT 301
Query: 499 IRVFDLNKLE 528
++ +DL E
Sbjct: 302 VKFWDLETFE 311
Score = 47.6 bits (108), Expect = 1e-05
Identities = 33/116 (28%), Positives = 54/116 (46%), Gaps = 1/116 (0%)
Frame = +1
Query: 154 TCGGHTRPVVHLDFSDVTKDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALT 333
T GHTR V L F T DG +++S +D + G + F+ H+G + +
Sbjct: 231 TYKGHTRGVNVLRF---TPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFH 287
Query: 334 QNANLAASGAADFTAKLWDARYGDMVHTFEHEHI-VKSVNFNADDTLLVTASNEKL 498
+ L A+G+AD T K WD +++ + E V+ + FN D ++ E L
Sbjct: 288 PHEFLLATGSADKTVKFWDLETFELIGSGGTETTGVRCLTFNPDGKSVLCGLQESL 343
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 65.3 bits (152), Expect = 5e-11
Identities = 36/123 (29%), Positives = 69/123 (56%), Gaps = 4/123 (3%)
Frame = +1
Query: 301 HKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHTFE---HEHIVKSVNFNADDTL 471
H + VA+ +N +L +G+ D TA +W R D+VH H+ + SV F+ D
Sbjct: 498 HDKDINSVAVARNDSLVCTGSEDRTASIW--RLPDLVHVVTLKGHKRRIFSVEFSTVDQC 555
Query: 472 LVTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVFL-NNSRIVSVSDDNTMRVWDRN 648
++TAS +K ++++ ++ + ++ GHTSS+ A F+ + ++ VS D +++W+ N
Sbjct: 556 VMTASGDKTVKIWAIS--DGSCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVN 613
Query: 649 SGE 657
+ E
Sbjct: 614 TSE 616
Score = 59.3 bits (137), Expect = 3e-09
Identities = 38/131 (29%), Positives = 66/131 (50%), Gaps = 6/131 (4%)
Frame = +1
Query: 268 ETGDWIGTFEGHKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHTFE-HEHIVKS 444
ET I +++GH+G V G+A + L A+ AD +WD G H F H+ +V S
Sbjct: 90 ETLKCIRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSS 149
Query: 445 VNFNADD--TLLVTASNEKLIRVFDLN--KLEAGPIEKINGHTSSIRH-AVFLNNSRIVS 609
+ F+ D +L++ S++ +RV+DLN E + + H S++ A+ + + S
Sbjct: 150 ILFHPDSNKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFS 209
Query: 610 VSDDNTMRVWD 642
D + +WD
Sbjct: 210 AGRDKVVNLWD 220
Score = 53.6 bits (123), Expect = 2e-07
Identities = 47/184 (25%), Positives = 82/184 (44%), Gaps = 9/184 (4%)
Frame = +1
Query: 202 VTKDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALTQNANLAASGAADFTAK 381
V+ DG ++ AC D ++ ++ T EG + +AL+ + L S +
Sbjct: 27 VSSDGSFIACACGDVINIVDSTDSSVK-STIEGESDTLTALALSPDDKLLFSAGHSRQIR 85
Query: 382 LWDARYGDMVHTFE-HEHIVKSVNFNADDTLLVTASNEKLIRVFDLNKLEAGPIEKINGH 558
+WD + +++ HE V + +A LL TA ++ + V+D++ GH
Sbjct: 86 VWDLETLKCIRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVDG--GFCTHYFRGH 143
Query: 559 TSSIRHAVF---LNNSRIVSVSDDNTMRVWDRNSGEEVQKV-----EFQSVPNSLXLSRD 714
+ +F N + ++S SDD T+RVWD N+ +K + S S+ LS D
Sbjct: 144 KGVVSSILFHPDSNKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSED 203
Query: 715 GAIL 726
G L
Sbjct: 204 GLTL 207
Score = 46.8 bits (106), Expect = 2e-05
Identities = 29/93 (31%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Frame = +1
Query: 154 TCGGHTRPVVHLDFSDVTKDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALT 333
T GHT V+ F +T DG +S DG L T + I T++ H+ VW +A+
Sbjct: 578 TFEGHTSSVLRASF--IT-DGTQFVSCGADGLLKLWNVNTSECIATYDQHEDKVWALAVG 634
Query: 334 QNANLAASGAADFTAKLW-DARYGDMVHTFEHE 429
+ + A+G D LW D+ D F E
Sbjct: 635 KKTEMIATGGGDAVINLWHDSTASDKEDDFRKE 667
Score = 41.9 bits (94), Expect = 5e-04
Identities = 28/121 (23%), Positives = 54/121 (44%), Gaps = 1/121 (0%)
Frame = +1
Query: 151 LTCGGHTRPVVHLDFSDVTKDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVAL 330
+T GH R + ++FS V + +++A D + G + TFEGH +V +
Sbjct: 535 VTLKGHKRRIFSVEFSTVDQ---CVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASF 591
Query: 331 TQNANLAASGAADFTAKLWDARYGDMVHTF-EHEHIVKSVNFNADDTLLVTASNEKLIRV 507
+ S AD KLW+ + + T+ +HE V ++ ++ T + +I +
Sbjct: 592 ITDGTQFVSCGADGLLKLWNVNTSECIATYDQHEDKVWALAVGKKTEMIATGGGDAVINL 651
Query: 508 F 510
+
Sbjct: 652 W 652
Score = 35.1 bits (77), Expect = 0.060
Identities = 33/128 (25%), Positives = 59/128 (46%), Gaps = 14/128 (10%)
Frame = +1
Query: 298 GHKGAVWGV--ALTQNAN-LAASGAADFTAKLWDARYGDMVHTFE-HEHIVKSVNFNADD 465
GHK V + ++ + N L +G+ D T +LW+A + H + +V F
Sbjct: 399 GHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFAKKS 458
Query: 466 -TLLVTASNEKLIRVFDLNKLEAGPIEKINGHTSSI--RH-------AVFLNNSRIVSVS 615
+ V+ S ++ ++V+ L+ + E IN T S+ H AV N+S + + S
Sbjct: 459 FSFFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDINSVAVARNDSLVCTGS 518
Query: 616 DDNTMRVW 639
+D T +W
Sbjct: 519 EDRTASIW 526
>At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI3 (SP:O22469) [Arabidopsis thaliana]
Length = 424
Score = 64.1 bits (149), Expect = 1e-10
Identities = 45/150 (30%), Positives = 73/150 (48%), Gaps = 8/150 (5%)
Frame = +1
Query: 292 FEGHKGAVWGVAL-TQNANLAASGAADFTAKLWDARYGDMVHTFE-HEHIVKSVNFNA-D 462
+EGH+ + VA +N N+ S D +WD R M H + HE + ++FN +
Sbjct: 214 YEGHQSIIEDVAWHMKNENIFGSAGDDCQLVIWDLRTNQMQHQVKVHEREINYLSFNPFN 273
Query: 463 DTLLVTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVFLNNSRIV--SVSDDNTMRV 636
+ +L TAS++ + +FDL KL A P+ ++ H + + N V S +D + V
Sbjct: 274 EWVLATASSDSTVALFDLRKLTA-PLHVLSKHEGEVFQVEWDPNHETVLASSGEDRRLMV 332
Query: 637 WDRNS-GEEVQKVEF--QSVPNSLXLSRDG 717
WD N G+E ++E + P L S G
Sbjct: 333 WDINRVGDEQLEIELDAEDGPPELLFSHGG 362
Score = 31.9 bits (69), Expect = 0.56
Identities = 31/120 (25%), Positives = 61/120 (50%), Gaps = 19/120 (15%)
Frame = +1
Query: 337 NANLAASGAADFTAKLWDAR-YGDMVHTF-EHEHIVKSVNFNAD-DTLLVTASNEKLIRV 507
N + A+ ++D T L+D R +H +HE V V ++ + +T+L ++ ++ + V
Sbjct: 273 NEWVLATASSDSTVALFDLRKLTAPLHVLSKHEGEVFQVEWDPNHETVLASSGEDRRLMV 332
Query: 508 FDLNKL-----------EAGPIEKI---NGHTSSIRHAVFLNNSR--IVSVSDDNTMRVW 639
+D+N++ E GP E + GH + I + + I SV++DN+++VW
Sbjct: 333 WDINRVGDEQLEIELDAEDGPPELLFSHGGHKAKISDFAWNKDEPWVISSVAEDNSLQVW 392
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 64.1 bits (149), Expect = 1e-10
Identities = 53/191 (27%), Positives = 80/191 (41%), Gaps = 5/191 (2%)
Frame = +1
Query: 298 GHKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHTFE-HEHIVKSVNFNADDTLL 474
GH V VA L +GA+ KLWD MV F H +V F+ L
Sbjct: 5 GHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFL 64
Query: 475 VTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVFLNNSR-IVSVSDDNTMRVWDRNS 651
+ S++ +RV+D K G I+ GHT I F + R +VS DN ++VWD +
Sbjct: 65 ASGSSDTNLRVWDTRK--KGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTA 122
Query: 652 GEEVQKVEFQSVP-NSLXL-SRDGAILTVAHGTNVSFYTSDTMRKL-REFPVPTKCYSAS 822
G+ + + + P SL + + T + V F+ +T + P T + +
Sbjct: 123 GKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGTTRPEATGVRAIA 182
Query: 823 LAPXRATFVCG 855
P T CG
Sbjct: 183 FHPDGQTLFCG 193
Score = 54.8 bits (126), Expect = 7e-08
Identities = 40/168 (23%), Positives = 74/168 (44%), Gaps = 3/168 (1%)
Frame = +1
Query: 163 GHTRPVVHLDFSDVTKDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALTQNA 342
GHT PV + F+ + +++ G L E + F GH+ V
Sbjct: 5 GHTSPVDSVAFNS---EEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFG 61
Query: 343 NLAASGAADFTAKLWDARYGDMVHTFE-HEHIVKSVNFNADDTLLVTASNEKLIRVFDLN 519
ASG++D ++WD R + T++ H + ++ F+ D +V+ + +++V+DL
Sbjct: 62 EFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLT 121
Query: 520 KLEAGP-IEKINGHTSSIRHAVFLNNSRIVSV-SDDNTMRVWDRNSGE 657
AG + + H IR F +++ S D T++ WD + E
Sbjct: 122 ---AGKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFE 166
Score = 54.4 bits (125), Expect = 9e-08
Identities = 33/143 (23%), Positives = 65/143 (45%), Gaps = 1/143 (0%)
Frame = +1
Query: 214 GYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALTQNANLAASGAADFTAKLWDA 393
G +L S D + I T++GH + + + + SG D K+WD
Sbjct: 61 GEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDL 120
Query: 394 RYGDMVHTFE-HEHIVKSVNFNADDTLLVTASNEKLIRVFDLNKLEAGPIEKINGHTSSI 570
G ++H F+ HE ++S++F+ + LL T S ++ ++ +DL E I + +
Sbjct: 121 TAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFEL--IGTTRPEATGV 178
Query: 571 RHAVFLNNSRIVSVSDDNTMRVW 639
R F + + + D+ ++V+
Sbjct: 179 RAIAFHPDGQTLFCGLDDGLKVY 201
Score = 44.4 bits (100), Expect = 1e-04
Identities = 31/116 (26%), Positives = 54/116 (46%), Gaps = 1/116 (0%)
Frame = +1
Query: 154 TCGGHTRPVVHLDFSDVTKDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALT 333
T GHTR + ++FS DG +++S D + G + F+ H+G + +
Sbjct: 86 TYKGHTRGISTIEFSP---DGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFH 142
Query: 334 QNANLAASGAADFTAKLWDARYGDMVHTFEHEHI-VKSVNFNADDTLLVTASNEKL 498
L A+G+AD T K WD +++ T E V+++ F+ D L ++ L
Sbjct: 143 PLEFLLATGSADRTVKFWDLETFELIGTTRPEATGVRAIAFHPDGQTLFCGLDDGL 198
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 62.5 bits (145), Expect = 3e-10
Identities = 51/189 (26%), Positives = 86/189 (45%), Gaps = 5/189 (2%)
Frame = +1
Query: 214 GYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALTQNANLAASGAADFTAKLWDA 393
G YL + D L TG + EGH +V+G+A Q+ LAAS D A++WD
Sbjct: 351 GKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDL 410
Query: 394 RYGDMVHTFE-HEHIVKSVNFNADDTLLVTASNEKLIRVFDLNKLEAGPIEKINGHTSSI 570
R G + F+ H V SVNF+ + L + + R++DL ++ + I H + +
Sbjct: 411 RTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKS--LYIIPAHANLV 468
Query: 571 RHAVF--LNNSRIVSVSDDNTMRVWDRNSGEEVQKVE-FQSVPNSLXLSRDGA-ILTVAH 738
+ + + S D + +W V+ + +S SL ++ D + I TV+H
Sbjct: 469 SQVKYEPQEGYFLATASYDMKVNIWSGRDFSLVKSLAGHESKVASLDITADSSCIATVSH 528
Query: 739 GTNVSFYTS 765
+ +TS
Sbjct: 529 DRTIKLWTS 537
Score = 57.6 bits (133), Expect = 1e-08
Identities = 42/169 (24%), Positives = 77/169 (45%), Gaps = 3/169 (1%)
Frame = +1
Query: 163 GHTRPVVHLDFSDVTKDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALTQNA 342
GH+R V + F +DG S D + TG I F+GH V+ V + N
Sbjct: 379 GHSRSVYGIAFQ---QDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNG 435
Query: 343 NLAASGAADFTAKLWDARYGDMVHTF-EHEHIVKSVNFNADD-TLLVTASNEKLIRVFDL 516
ASG D ++WD R ++ H ++V V + + L TAS + + ++
Sbjct: 436 YHLASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIW-- 493
Query: 517 NKLEAGPIEKINGHTSSIRHA-VFLNNSRIVSVSDDNTMRVWDRNSGEE 660
+ + ++ + GH S + + ++S I +VS D T+++W + ++
Sbjct: 494 SGRDFSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKLWTSSGNDD 542
Score = 57.2 bits (132), Expect = 1e-08
Identities = 50/180 (27%), Positives = 77/180 (42%), Gaps = 5/180 (2%)
Frame = +1
Query: 139 KQVPLTCG--GHTRPVVHLDFSDVTKDGYYLISACKDGKPML-RQGETGDWIGTFEGHKG 309
K + L C G RP+ FS +DG L + G L + + I + HK
Sbjct: 243 KHMALDCSNFGDDRPLTGCSFS---RDGKILATCSLSGVTKLWEMPQVTNTIAVLKDHKE 299
Query: 310 AVWGVALTQNANLAASGAADFTAKLWDARYGDMVHTFE-HEHIVKSVNFNADDTLLVTAS 486
V + + A+ +AD TAKLW G ++ TFE H + V F+ L T S
Sbjct: 300 RATDVVFSPVDDCLATASADRTAKLWKTD-GTLLQTFEGHLDRLARVAFHPSGKYLGTTS 358
Query: 487 NEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVFLNNSRI-VSVSDDNTMRVWDRNSGEEV 663
+K R++D+N + GH+ S+ F + + S D+ RVWD +G +
Sbjct: 359 YDKTWRLWDIN--TGAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSI 416
Score = 50.4 bits (115), Expect = 1e-06
Identities = 35/125 (28%), Positives = 52/125 (41%), Gaps = 2/125 (1%)
Frame = +1
Query: 274 GDWIGTFEGHKGAVWGVALTQNANLAASGAADFTAKLWDARYG-DMVHTFEHEHIVKSVN 450
G + TFEGH + VA + + + D T +LWD G +++ H V +
Sbjct: 329 GTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIA 388
Query: 451 FNADDTLLVTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVFL-NNSRIVSVSDDNT 627
F D L + + L RV+DL I GH + F N + S +DN
Sbjct: 389 FQQDGALAASCGLDSLARVWDLR--TGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQ 446
Query: 628 MRVWD 642
R+WD
Sbjct: 447 CRIWD 451
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 61.7 bits (143), Expect = 6e-10
Identities = 46/161 (28%), Positives = 74/161 (45%), Gaps = 2/161 (1%)
Frame = +1
Query: 208 KDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALTQNANLAASGAADFTAKLW 387
K L++ +D K L + I + GH + V + L A+GAA T KLW
Sbjct: 27 KSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLW 86
Query: 388 DARYGDMVHTFE-HEHIVKSVNFNADDTLLVTASNEKLIRVFDLNKLEAGPIEKINGHTS 564
D +V T H SV+F+ + S + ++++D+ K G I GHT
Sbjct: 87 DLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRK--KGCIHTYKGHTR 144
Query: 565 SIRHAVFLNNSR-IVSVSDDNTMRVWDRNSGEEVQKVEFQS 684
+ F + R +VS +DN ++VWD +G+ + EF+S
Sbjct: 145 GVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLL--TEFKS 183
Score = 47.6 bits (108), Expect = 1e-05
Identities = 33/116 (28%), Positives = 55/116 (47%), Gaps = 1/116 (0%)
Frame = +1
Query: 154 TCGGHTRPVVHLDFSDVTKDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALT 333
T GHTR V L F T DG +++S +D + G + F+ H+G + +
Sbjct: 138 TYKGHTRGVNVLRF---TPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFH 194
Query: 334 QNANLAASGAADFTAKLWDARYGDMVHTFEHEHI-VKSVNFNADDTLLVTASNEKL 498
+ L A+G+AD T K WD +++ + E V+ ++FN D ++ E L
Sbjct: 195 PHEFLLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGKTVLCGLQESL 250
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 61.7 bits (143), Expect = 6e-10
Identities = 46/161 (28%), Positives = 74/161 (45%), Gaps = 2/161 (1%)
Frame = +1
Query: 208 KDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALTQNANLAASGAADFTAKLW 387
K L++ +D K L + I + GH + V + L A+GAA T KLW
Sbjct: 27 KSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLW 86
Query: 388 DARYGDMVHTFE-HEHIVKSVNFNADDTLLVTASNEKLIRVFDLNKLEAGPIEKINGHTS 564
D +V T H SV+F+ + S + ++++D+ K G I GHT
Sbjct: 87 DLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRK--KGCIHTYKGHTR 144
Query: 565 SIRHAVFLNNSR-IVSVSDDNTMRVWDRNSGEEVQKVEFQS 684
+ F + R +VS +DN ++VWD +G+ + EF+S
Sbjct: 145 GVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLL--TEFKS 183
Score = 47.6 bits (108), Expect = 1e-05
Identities = 33/116 (28%), Positives = 55/116 (47%), Gaps = 1/116 (0%)
Frame = +1
Query: 154 TCGGHTRPVVHLDFSDVTKDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALT 333
T GHTR V L F T DG +++S +D + G + F+ H+G + +
Sbjct: 138 TYKGHTRGVNVLRF---TPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFH 194
Query: 334 QNANLAASGAADFTAKLWDARYGDMVHTFEHEHI-VKSVNFNADDTLLVTASNEKL 498
+ L A+G+AD T K WD +++ + E V+ ++FN D ++ E L
Sbjct: 195 PHEFLLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGKTVLCGLQESL 250
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 61.7 bits (143), Expect = 6e-10
Identities = 47/162 (29%), Positives = 75/162 (46%), Gaps = 2/162 (1%)
Frame = +1
Query: 163 GHTRPVVHLDFSDVTKDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALTQNA 342
GH ++ L + T DG ++SA D ETG I H V T+
Sbjct: 94 GHKNAILDLHW---TSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRG 150
Query: 343 N-LAASGAADFTAKLWDARYGDMVHTFEHEHIVKSVNFNADDTLLVTASNEKLIRVFDLN 519
L SG+ D TAKLWD R + TF ++ + +V+F+ + T + ++V+DL
Sbjct: 151 PPLIISGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDAADKIFTGGVDNDVKVWDLR 210
Query: 520 KLEAGPIEKINGHTSSIR-HAVFLNNSRIVSVSDDNTMRVWD 642
K EA + GH +I ++ + S +++ DN + VWD
Sbjct: 211 KGEA--TMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWD 250
Score = 50.4 bits (115), Expect = 1e-06
Identities = 46/207 (22%), Positives = 87/207 (42%), Gaps = 5/207 (2%)
Frame = +1
Query: 121 NKMTTLKQVPLTCGGHTRPVVHLDFSDVTKDGYYLISACKDGKPMLRQ--GETGDWIGTF 294
N+ ++L+ + GH V + F+ G + S D + L + G+ +++
Sbjct: 37 NRTSSLEAPIMLLSGHPSAVYTMKFNPA---GTLIASGSHDREIFLWRVHGDCKNFM-VL 92
Query: 295 EGHKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHTF-EHEHIVKS-VNFNADDT 468
+GHK A+ + T + + S + D T + WD G + EH V S
Sbjct: 93 KGHKNAILDLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPP 152
Query: 469 LLVTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVFLNNSRIVSVSDDNTMRVWDRN 648
L+++ S++ +++D+ + G I+ + +I + DN ++VWD
Sbjct: 153 LIISGSDDGTAKLWDMR--QRGAIQTFPDKYQITAVSFSDAADKIFTGGVDNDVKVWDLR 210
Query: 649 SGEEVQKVE-FQSVPNSLXLSRDGAIL 726
GE +E Q + LS DG+ L
Sbjct: 211 KGEATMTLEGHQDTITGMSLSPDGSYL 237
Score = 47.2 bits (107), Expect = 1e-05
Identities = 30/106 (28%), Positives = 59/106 (55%), Gaps = 2/106 (1%)
Frame = +1
Query: 424 HEHIVKSVNFNADDTLLVTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVFLNN-SR 600
H V ++ FN TL+ + S+++ I ++ ++ + + GH ++I + ++ S+
Sbjct: 52 HPSAVYTMKFNPAGTLIASGSHDREIFLWRVHG-DCKNFMVLKGHKNAILDLHWTSDGSQ 110
Query: 601 IVSVSDDNTMRVWDRNSGEEVQKV-EFQSVPNSLXLSRDGAILTVA 735
IVS S D T+R WD +G++++K+ E S NS +R G L ++
Sbjct: 111 IVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIIS 156
Score = 45.2 bits (102), Expect = 6e-05
Identities = 36/135 (26%), Positives = 63/135 (46%), Gaps = 10/135 (7%)
Frame = +1
Query: 256 LRQGETGDWIGTFEGHKGAVWGVALTQNANLAASGAADFTAKLWDAR-YGDM---VHTFE 423
LR+GE T EGH+ + G++L+ + + + D +WD R Y V FE
Sbjct: 209 LRKGEA---TMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFE 265
Query: 424 -HEHIVK----SVNFNADDTLLVTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVFL 588
H+H + +++ D T + S+++++ ++D I K+ GHT S+ VF
Sbjct: 266 GHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWDTTSRRT--IYKLPGHTGSVNECVFH 323
Query: 589 NNSRIV-SVSDDNTM 630
I+ S S D +
Sbjct: 324 PTEPIIGSCSSDKNI 338
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 60.9 bits (141), Expect = 1e-09
Identities = 51/209 (24%), Positives = 95/209 (45%), Gaps = 7/209 (3%)
Frame = +1
Query: 202 VTKDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALTQNANLAASGAADFTAK 381
++ DG + +S DG+ L TG+ F GH V VA + + S + D T K
Sbjct: 71 LSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIK 130
Query: 382 LWDARYGDMVHTFE----HEHIVKSVNFNADDTL--LVTASNEKLIRVFDLNKLEAGPIE 543
LW+ G+ +T H+ V V F+ + + +V+AS +K ++V++L +
Sbjct: 131 LWNT-LGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLR--N 187
Query: 544 KINGHTSSIRH-AVFLNNSRIVSVSDDNTMRVWDRNSGEEVQKVEFQSVPNSLXLSRDGA 720
+ GH+ + AV + S S D + +WD G+++ +E S+ +SL S +
Sbjct: 188 SLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGSIIHSLCFSPNRY 247
Query: 721 ILTVAHGTNVSFYTSDTMRKLREFPVPTK 807
L A ++ + ++ + + V K
Sbjct: 248 WLCAATENSIRIWDLESKSVVEDLKVDLK 276
Score = 56.8 bits (131), Expect = 2e-08
Identities = 43/147 (29%), Positives = 71/147 (48%), Gaps = 5/147 (3%)
Frame = +1
Query: 298 GHKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHTF-EHEHIVKSVNFNADDTLL 474
GH V V L+ + A SG+ D +LWD G+ F H V SV F+ D+ +
Sbjct: 61 GHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQI 120
Query: 475 VTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVFLNNS---RIVSVSDDNTMRVWD- 642
V+AS ++ I++++ I + +GH + F N+ IVS S D T++VW+
Sbjct: 121 VSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNL 180
Query: 643 RNSGEEVQKVEFQSVPNSLXLSRDGAI 723
+N V N++ +S DG++
Sbjct: 181 QNCKLRNSLVGHSGYLNTVAVSPDGSL 207
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 60.9 bits (141), Expect = 1e-09
Identities = 39/143 (27%), Positives = 70/143 (48%), Gaps = 2/143 (1%)
Frame = +1
Query: 220 YLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALTQNANLAASGAADFTAKLWDARY 399
+++++ G L G I F+ H+G V GV + L SG D+ K+W+ +
Sbjct: 23 WILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKT 82
Query: 400 GDMVHT-FEHEHIVKSVNFNADDTLLVTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRH 576
+ T H +++V F+ ++ +V+AS+++ IR+++ I + GH +
Sbjct: 83 HRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTC--ISVLTGHNHYVMC 140
Query: 577 AVF-LNNSRIVSVSDDNTMRVWD 642
A F +VS S D T+RVWD
Sbjct: 141 ASFHPKEDLVVSASLDQTVRVWD 163
Score = 52.4 bits (120), Expect = 4e-07
Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 2/93 (2%)
Frame = +1
Query: 379 KLWDARYGDMVHTF-EHEHIVKSVNFNADDTLLVTASNEKLIRVFDLNKLEAGPIEKING 555
+LWD R G ++ F EHE V+ V+F+ L V+ ++ I+V++ + + G
Sbjct: 34 QLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKTHRC--LFTLLG 91
Query: 556 HTSSIRHAVFLN-NSRIVSVSDDNTMRVWDRNS 651
H IR F + N IVS SDD T+R+W+ S
Sbjct: 92 HLDYIRTVQFHHENPWIVSASDDQTIRIWNWQS 124
Score = 45.6 bits (103), Expect = 4e-05
Identities = 20/82 (24%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Frame = +1
Query: 424 HEHIVKSVNFNADDTLLVTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVF-LNNSR 600
H+ V +F+ L+V+ ++++ ++++ +N+ +A ++ + GH +++ +F
Sbjct: 203 HDRGVNWASFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDI 262
Query: 601 IVSVSDDNTMRVWDRNSGEEVQ 666
IVS S+D ++RVWD +Q
Sbjct: 263 IVSNSEDKSIRVWDATKRTGIQ 284
Score = 38.7 bits (86), Expect = 0.005
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = +1
Query: 295 EGHKGAVWGVALTQNANLAASGAADFTAKLW---DARYGDMVHTFEHEHIVKSVNFNADD 465
EGH V + L SGA D KLW + + ++ H + V SV F+A
Sbjct: 201 EGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQ 260
Query: 466 TLLVTASNEKLIRVFDLNK 522
++V+ S +K IRV+D K
Sbjct: 261 DIIVSNSEDKSIRVWDATK 279
Score = 37.5 bits (83), Expect = 0.011
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = +1
Query: 223 LISACKDGKPML-RQGETGDW-IGTFEGHKGAVWGVALTQNANLAASGAADFTAKLWDAR 396
++S D + L R ET W + T GH V V ++ S + D + ++WDA
Sbjct: 219 IVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDAT 278
Query: 397 YGDMVHTFEHEH 432
+ TF EH
Sbjct: 279 KRTGIQTFRREH 290
Score = 35.5 bits (78), Expect = 0.046
Identities = 24/102 (23%), Positives = 46/102 (45%), Gaps = 1/102 (0%)
Frame = +1
Query: 226 ISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALTQNANLAASGAADFTAKLWDARYGD 405
+S D K + +T + T GH + V S + D T ++W+ +
Sbjct: 67 VSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRT 126
Query: 406 MVHTFE-HEHIVKSVNFNADDTLLVTASNEKLIRVFDLNKLE 528
+ H H V +F+ + L+V+AS ++ +RV+D+ L+
Sbjct: 127 CISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALK 168
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very
similar to guanine nucleotide-binding protein; activated
protein kinase C receptor; RACK1 (GI:9294068)
{Arabidopsis thaliana}; similar to WD-40 repeat
auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
thaliana];
Length = 326
Score = 60.5 bits (140), Expect = 1e-09
Identities = 51/209 (24%), Positives = 95/209 (45%), Gaps = 7/209 (3%)
Frame = +1
Query: 202 VTKDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALTQNANLAASGAADFTAK 381
++ DG + +S DG+ L TG+ F GH V VA + + S + D T K
Sbjct: 71 LSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIK 130
Query: 382 LWDARYGDMVHTFE----HEHIVKSVNFNADDTL--LVTASNEKLIRVFDLNKLEAGPIE 543
LW+ G+ +T H+ V V F+ + + +V+AS +K ++V++L +
Sbjct: 131 LWNT-LGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLR--N 187
Query: 544 KINGHTSSIRH-AVFLNNSRIVSVSDDNTMRVWDRNSGEEVQKVEFQSVPNSLXLSRDGA 720
+ GH+ + AV + S S D + +WD G+++ +E S+ +SL S +
Sbjct: 188 TLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGSIIHSLCFSPNRY 247
Query: 721 ILTVAHGTNVSFYTSDTMRKLREFPVPTK 807
L A ++ + ++ + + V K
Sbjct: 248 WLCAATENSIRIWDLESKSVVEDLKVDLK 276
Score = 56.4 bits (130), Expect = 2e-08
Identities = 42/147 (28%), Positives = 70/147 (47%), Gaps = 5/147 (3%)
Frame = +1
Query: 298 GHKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHTF-EHEHIVKSVNFNADDTLL 474
GH V V L+ + A SG+ D +LWD G+ F H V SV F+ D+ +
Sbjct: 61 GHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQI 120
Query: 475 VTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVFLNNS---RIVSVSDDNTMRVWD- 642
V+AS ++ I++++ I + +GH + F N+ IVS S D T++VW+
Sbjct: 121 VSASRDRTIKLWNTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNL 180
Query: 643 RNSGEEVQKVEFQSVPNSLXLSRDGAI 723
+N N++ +S DG++
Sbjct: 181 QNCKLRNTLAGHSGYLNTVAVSPDGSL 207
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 60.1 bits (139), Expect = 2e-09
Identities = 46/181 (25%), Positives = 80/181 (44%), Gaps = 5/181 (2%)
Frame = +1
Query: 295 EGHKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHTFE-HEHIVKSVNFNADDTL 471
+GH+GAV + N A + D T +LW+ G ++ T++ H V+ V+ +D+
Sbjct: 15 KGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDNAK 74
Query: 472 LVTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVFLNNSR-IVSVSDDNTMRVWD-- 642
+ ++ + +D++ I K GH + F ++S +VS D ++RVWD
Sbjct: 75 FCSCGGDRQVYYWDVS--TGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWDCR 132
Query: 643 RNSGEEVQKVE-FQSVPNSLXLSRDGAILTVAHGTNVSFYTSDTMRKLREFPVPTKCYSA 819
+S E VQ ++ F S+ L++ I GT +F P C S
Sbjct: 133 SHSVEPVQIIDTFLDTVMSVVLTKTEIIGGSVDGTVRTFDMRIGREMSDNLGQPVNCISI 192
Query: 820 S 822
S
Sbjct: 193 S 193
Score = 41.9 bits (94), Expect = 5e-04
Identities = 26/106 (24%), Positives = 50/106 (47%), Gaps = 3/106 (2%)
Frame = +1
Query: 202 VTKDGYYLISACKDGKPMLRQGETGDWIGTFEGH--KGAVWGVALTQNANLAASGAADFT 375
++ DG +++ C D L TG+ + ++GH K LT + G+ D
Sbjct: 192 ISNDGNCVLAGCLDSTLRLLDRTTGELLQVYKGHISKSFKTDCCLTNSDAHVIGGSEDGL 251
Query: 376 AKLWDARYGDMVHTFE-HEHIVKSVNFNADDTLLVTASNEKLIRVF 510
WD ++ F H+ +V SV+++ + ++T+S + IRV+
Sbjct: 252 VFFWDLVDAKVLSKFRAHDLVVTSVSYHPKEDCMLTSSVDGTIRVW 297
Score = 38.7 bits (86), Expect = 0.005
Identities = 36/160 (22%), Positives = 71/160 (44%), Gaps = 5/160 (3%)
Frame = +1
Query: 202 VTKDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALTQNANLAASGAADFTAK 381
VT D S D + TG I F GH G V V ++++ S D + +
Sbjct: 68 VTSDNAKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLR 127
Query: 382 LWDARYGDMVHTFEHEHIVKS-----VNFNADDTLLVTASNEKLIRVFDLNKLEAGPIEK 546
+WD R H+ E I+ + ++ T ++ S + +R FD+ ++ +
Sbjct: 128 VWDCR----SHSVEPVQIIDTFLDTVMSVVLTKTEIIGGSVDGTVRTFDM-RIGREMSDN 182
Query: 547 INGHTSSIRHAVFLNNSRIVSVSDDNTMRVWDRNSGEEVQ 666
+ + I ++ + + +++ D+T+R+ DR +GE +Q
Sbjct: 183 LGQPVNCI--SISNDGNCVLAGCLDSTLRLLDRTTGELLQ 220
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 59.7 bits (138), Expect = 2e-09
Identities = 35/143 (24%), Positives = 66/143 (46%), Gaps = 1/143 (0%)
Frame = +1
Query: 214 GYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALTQNANLAASGAADFTAKLWDA 393
G +L S D + I T++GH + + T + SG D K+WD
Sbjct: 112 GEFLASGSSDANLKIWDIRKKGCIQTYKGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDL 171
Query: 394 RYGDMVHTFE-HEHIVKSVNFNADDTLLVTASNEKLIRVFDLNKLEAGPIEKINGHTSSI 570
G ++H F+ HE ++S++F+ + LL T S ++ ++ +DL E I + +
Sbjct: 172 TAGKLLHEFKFHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFEL--IGSTRPEATGV 229
Query: 571 RHAVFLNNSRIVSVSDDNTMRVW 639
R F + R + D++++V+
Sbjct: 230 RSIKFHPDGRTLFCGLDDSLKVY 252
Score = 52.8 bits (121), Expect = 3e-07
Identities = 45/204 (22%), Positives = 82/204 (40%), Gaps = 4/204 (1%)
Frame = +1
Query: 163 GHTRPVVHLDFSDVTKDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALTQNA 342
GHT V + F +++ G L E + F GH+ V
Sbjct: 56 GHTSAVDSVAFDSAE---VLVLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFG 112
Query: 343 NLAASGAADFTAKLWDARYGDMVHTFE-HEHIVKSVNFNADDTLLVTASNEKLIRVFDLN 519
ASG++D K+WD R + T++ H + ++ F D +V+ + +++V+DL
Sbjct: 113 EFLASGSSDANLKIWDIRKKGCIQTYKGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLT 172
Query: 520 KLEAGP-IEKINGHTSSIRHAVFLNNSRIVSV-SDDNTMRVWDRNSGEEVQKVEFQSV-P 690
AG + + H IR F +++ S D T++ WD + E + ++
Sbjct: 173 ---AGKLLHEFKFHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEATGV 229
Query: 691 NSLXLSRDGAILTVAHGTNVSFYT 762
S+ DG L ++ Y+
Sbjct: 230 RSIKFHPDGRTLFCGLDDSLKVYS 253
Score = 42.7 bits (96), Expect = 3e-04
Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 1/116 (0%)
Frame = +1
Query: 154 TCGGHTRPVVHLDFSDVTKDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALT 333
T GH+R + + F T DG +++S D + G + F+ H+G + +
Sbjct: 137 TYKGHSRGISTIRF---TPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLDFH 193
Query: 334 QNANLAASGAADFTAKLWDARYGDMVHTFEHEHI-VKSVNFNADDTLLVTASNEKL 498
L A+G+AD T K WD +++ + E V+S+ F+ D L ++ L
Sbjct: 194 PLEFLLATGSADRTVKFWDLETFELIGSTRPEATGVRSIKFHPDGRTLFCGLDDSL 249
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 58.8 bits (136), Expect = 4e-09
Identities = 36/125 (28%), Positives = 64/125 (51%), Gaps = 1/125 (0%)
Frame = +1
Query: 139 KQVPLTCGGHTRPVVHLDFSDVTKDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVW 318
KQ GH + V H+ FS DG ++ SA D L G TG ++ F GH G V+
Sbjct: 350 KQPKKRLTGHQQLVNHVYFSP---DGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVY 406
Query: 319 GVALTQNANLAASGAADFTAKLWDARYGDMVHTFE-HEHIVKSVNFNADDTLLVTASNEK 495
V+ + ++ L SG+ D T K+W+ R + H V +V+++ D +V+ ++
Sbjct: 407 QVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKVVSGGKDR 466
Query: 496 LIRVF 510
+++++
Sbjct: 467 VLKLW 471
Score = 44.4 bits (100), Expect = 1e-04
Identities = 48/202 (23%), Positives = 92/202 (45%), Gaps = 8/202 (3%)
Frame = +1
Query: 154 TCGGHTRPVVHLDFSDVTKDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALT 333
T GH V+ + FS DG L S D L T + T +GHK V VA +
Sbjct: 104 TIAGHAEAVLCVSFSP---DGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWS 160
Query: 334 QNANLAASGAADFTAKLWDARYGDMVHT--FEHEHIV-----KSVNFNADDTLLVTASNE 492
+ SG+ W+ + G++ + H+ + + V+ ++ VT+S +
Sbjct: 161 PDGKHLVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTSSKD 220
Query: 493 KLIRVFDLNKLEAGPIEKINGHTSSIRHAVFLNNSRIVSVSDDNTMRVWDRNSGEEVQKV 672
R++D+ ++ I ++GHT ++ + + I + S D T+++W+ G+ ++++
Sbjct: 221 GDARIWDITLKKS--IICLSGHTLAVTCVKWGGDGIIYTGSQDCTIKMWETTQGKLIREL 278
Query: 673 EFQS-VPNSLXLSRDGAILTVA 735
+ NSL LS + + T A
Sbjct: 279 KGHGHWINSLALSTEYVLRTGA 300
Score = 44.0 bits (99), Expect = 1e-04
Identities = 43/174 (24%), Positives = 76/174 (43%), Gaps = 7/174 (4%)
Frame = +1
Query: 289 TFEGHKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHTFE-HEHIVKSVNFNADD 465
T GH AV V+ + + ASG+ D T +LWD + T + H++ V +V ++ D
Sbjct: 104 TIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDG 163
Query: 466 TLLVTASNEKLIRVFDLNK--LEAGPIEKINGHTSSIR-HAVFLNN--SRIVSVSDDNTM 630
LV+ S I ++ K LE P+ + I V L++ R V+ S D
Sbjct: 164 KHLVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTSSKDGDA 223
Query: 631 RVWDRNSGEEVQKVEFQSVP-NSLXLSRDGAILTVAHGTNVSFYTSDTMRKLRE 789
R+WD + + + ++ + DG I T + + + + + +RE
Sbjct: 224 RIWDITLKKSIICLSGHTLAVTCVKWGGDGIIYTGSQDCTIKMWETTQGKLIRE 277
Score = 40.3 bits (90), Expect = 0.002
Identities = 47/203 (23%), Positives = 88/203 (43%), Gaps = 5/203 (2%)
Frame = +1
Query: 124 KMTTLKQVPLTCGGHTRPVVHLDFSDV--TKDGYYLISACKDGKPMLRQGETGDWIGTFE 297
K L+ PLT GH + + + + V + +++ KDG + I
Sbjct: 181 KKGELEGSPLT--GHKKWITGISWEPVHLSSPCRRFVTSSKDGDARIWDITLKKSIICLS 238
Query: 298 GHKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHTFE-HEHIVKSVNFNADDTLL 474
GH AV V + + +G+ D T K+W+ G ++ + H H + S+ + + +L
Sbjct: 239 GHTLAVTCVKWGGDG-IIYTGSQDCTIKMWETTQGKLIRELKGHGHWINSLALSTE-YVL 296
Query: 475 VTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVFLNNSRIVSVSDDNTMRVWDRNSG 654
T + + R + N+ + +E+ N + R+VS SDD TM +W+ +
Sbjct: 297 RTGAFDHTGRQYPPNEEKQKALERYNKTKGD-------SPERLVSGSDDFTMFLWEPSVS 349
Query: 655 EEVQK--VEFQSVPNSLXLSRDG 717
++ +K Q + N + S DG
Sbjct: 350 KQPKKRLTGHQQLVNHVYFSPDG 372
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 58.8 bits (136), Expect = 4e-09
Identities = 38/143 (26%), Positives = 69/143 (48%), Gaps = 2/143 (1%)
Frame = +1
Query: 220 YLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALTQNANLAASGAADFTAKLWDARY 399
+++++ G L G I F+ H+G V GV + L SG D+ K+W+ +
Sbjct: 23 WILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKN 82
Query: 400 GDMVHT-FEHEHIVKSVNFNADDTLLVTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRH 576
+ T H +++V F+ + +V+AS+++ IR+++ + + GH +
Sbjct: 83 HRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTC--VSVLTGHNHYVMC 140
Query: 577 AVF-LNNSRIVSVSDDNTMRVWD 642
A F +VS S D T+RVWD
Sbjct: 141 ASFHPKEDLVVSASLDQTVRVWD 163
Score = 50.4 bits (115), Expect = 1e-06
Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Frame = +1
Query: 379 KLWDARYGDMVHTF-EHEHIVKSVNFNADDTLLVTASNEKLIRVFDLNKLEAGPIEKING 555
+LWD R G ++ F EHE V+ V+F+ L V+ ++ I+V++ + + G
Sbjct: 34 QLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKNHRC--LFTLLG 91
Query: 556 HTSSIRHAVFLNNSR-IVSVSDDNTMRVWDRNS 651
H IR F + IVS SDD T+R+W+ S
Sbjct: 92 HLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQS 124
Score = 43.6 bits (98), Expect = 2e-04
Identities = 19/74 (25%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Frame = +1
Query: 424 HEHIVKSVNFNADDTLLVTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVF-LNNSR 600
H+ V F+ L+V+ ++++ ++++ +N+ +A ++ + GH +++ +F
Sbjct: 203 HDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDI 262
Query: 601 IVSVSDDNTMRVWD 642
IVS S+D ++RVWD
Sbjct: 263 IVSNSEDKSIRVWD 276
Score = 39.9 bits (89), Expect = 0.002
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = +1
Query: 295 EGHKGAVWGVALTQNANLAASGAADFTAKLW---DARYGDMVHTFEHEHIVKSVNFNADD 465
EGH V A L SGA D KLW + + ++ H + V SV F+A
Sbjct: 201 EGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQ 260
Query: 466 TLLVTASNEKLIRVFDLNK 522
++V+ S +K IRV+D K
Sbjct: 261 DIIVSNSEDKSIRVWDATK 279
Score = 36.7 bits (81), Expect = 0.020
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = +1
Query: 223 LISACKDGKPML-RQGETGDW-IGTFEGHKGAVWGVALTQNANLAASGAADFTAKLWDAR 396
++S D + L R ET W + T GH V V ++ S + D + ++WDA
Sbjct: 219 IVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDAT 278
Query: 397 YGDMVHTFEHEH 432
+ TF EH
Sbjct: 279 KRTGLQTFRREH 290
Score = 35.1 bits (77), Expect = 0.060
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +1
Query: 289 TFEGHKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHTFE-HEHIVKSVNFNADD 465
T GH + V S + D T ++W+ + V H H V +F+ +
Sbjct: 88 TLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVSVLTGHNHYVMCASFHPKE 147
Query: 466 TLLVTASNEKLIRVFDLNKL 525
L+V+AS ++ +RV+D+ L
Sbjct: 148 DLVVSASLDQTVRVWDIGAL 167
>At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogenesis
repressor; identical to COP1 regulatory protein/FUSCA
protein FUS1 GI:402685 SP:P43254
Length = 675
Score = 58.4 bits (135), Expect = 6e-09
Identities = 30/119 (25%), Positives = 57/119 (47%), Gaps = 2/119 (1%)
Frame = +1
Query: 292 FEGHKGAVWGVALTQNA-NLAASGAADFTAKLWDARYGDMVHTFEHEHIVKSVNFN-ADD 465
+E H+ W V ++ ++ SG+ D K+W R V + + + V +N
Sbjct: 459 YEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKVWCTRQEASVINIDMKANICCVKYNPGSS 518
Query: 466 TLLVTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVFLNNSRIVSVSDDNTMRVWD 642
+ S + I +DL + P+ +GH ++ + FL+N+ + S S D+T+R+WD
Sbjct: 519 NYIAVGSADHHIHYYDLRNISQ-PLHVFSGHKKAVSYVKFLSNNELASASTDSTLRLWD 576
>At4g04940.1 68417.m00718 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats
Length = 910
Score = 57.6 bits (133), Expect = 1e-08
Identities = 37/154 (24%), Positives = 71/154 (46%), Gaps = 1/154 (0%)
Frame = +1
Query: 301 HKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHTFEHEHIVKSVNFNADDTLLVT 480
H G V GVA L S K+WD + ++ ++ + + ++ + LL T
Sbjct: 473 HDGEVIGVACDSTNTLMISAGYHGDLKVWDFKKRELKSQWDVGCSLVKIVYHRVNGLLAT 532
Query: 481 ASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVFLNNSR-IVSVSDDNTMRVWDRNSGE 657
+++ +IR++D+ L+ + + GHT I F + + ++S S D ++R+WD +
Sbjct: 533 VADDFVIRLYDVVTLKM--VREFRGHTDRITDLCFSEDGKWVISSSMDGSLRIWDVILAK 590
Query: 658 EVQKVEFQSVPNSLXLSRDGAILTVAHGTNVSFY 759
++ V +L LS + +L AH Y
Sbjct: 591 QIDGVHVDVPITALSLSPNMDVLATAHSDQNGVY 624
Score = 46.8 bits (106), Expect = 2e-05
Identities = 38/146 (26%), Positives = 71/146 (48%), Gaps = 6/146 (4%)
Frame = +1
Query: 238 KDGKPMLRQGETGDWIGTFEGHKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHT 417
++G L T + F+G +V + ++ A G AD + + + + + T
Sbjct: 159 QEGPLQLWNINTKKMLYQFKGWGSSVTSCVSSPALDVVAIGCADGKIHVHNIKLDEEIVT 218
Query: 418 FEHEH--IVKSVNFNADDT-LLVTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVFL 588
FEH V +++F+ D LL + + +I +++LNK + + + H SSI FL
Sbjct: 219 FEHASRGAVTALSFSTDGRPLLASGGSFGVISIWNLNKKRLQSVIR-DAHDSSIISLNFL 277
Query: 589 NNSRIV-SVSDDNTMRVW--DRNSGE 657
N ++ S S DN++++W D N G+
Sbjct: 278 ANEPVLMSASADNSLKMWIFDTNDGD 303
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 56.8 bits (131), Expect = 2e-08
Identities = 37/142 (26%), Positives = 71/142 (50%), Gaps = 2/142 (1%)
Frame = +1
Query: 298 GHKGAVWGVALTQNANLAASGAADFTAKLWDARY-GDMVHTFEHEHIVKSVNFNADDTLL 474
GH G V+ + + S +AD T +LW + ++V H + V F+
Sbjct: 416 GHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHYF 475
Query: 475 VTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVFLNNSRIVSVSDDNTMRVWDRNSG 654
+ S+++ R++ +++++ P+ + GH S + N + I + S D T+R+WD +G
Sbjct: 476 ASCSHDRTARIWSMDRIQ--PLRIMAGHLSDVDW--HPNCNYIATGSSDKTVRLWDVQTG 531
Query: 655 EEVQ-KVEFQSVPNSLXLSRDG 717
E V+ + +S+ SL +S DG
Sbjct: 532 ECVRIFIGHRSMVLSLAMSPDG 553
Score = 52.0 bits (119), Expect = 5e-07
Identities = 29/76 (38%), Positives = 38/76 (50%)
Frame = +1
Query: 163 GHTRPVVHLDFSDVTKDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALTQNA 342
GH V+ L S DG Y+ S +DG M+ T I GH VW ++ +
Sbjct: 539 GHRSMVLSLAMSP---DGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEG 595
Query: 343 NLAASGAADFTAKLWD 390
+L ASG+AD T KLWD
Sbjct: 596 SLLASGSADCTVKLWD 611
Score = 50.4 bits (115), Expect = 1e-06
Identities = 31/132 (23%), Positives = 64/132 (48%), Gaps = 2/132 (1%)
Frame = +1
Query: 184 HLDFSDVTKDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALTQNANLAASGA 363
HL D + Y+ + D L +TG+ + F GH+ V +A++ + ASG
Sbjct: 501 HLSDVDWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGD 560
Query: 364 ADFTAKLWDARYGDMV-HTFEHEHIVKSVNFNADDTLLVTASNEKLIRVFDL-NKLEAGP 537
D T +WD + H V S++++ + +LL + S + ++++D+ + +
Sbjct: 561 EDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDVTSSTKLTK 620
Query: 538 IEKINGHTSSIR 573
E+ NG+++ +R
Sbjct: 621 AEEKNGNSNRLR 632
Score = 47.6 bits (108), Expect = 1e-05
Identities = 44/191 (23%), Positives = 85/191 (44%), Gaps = 3/191 (1%)
Frame = +1
Query: 163 GHTRPVVHLDFSDVTKDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALTQNA 342
GH+ PV FS G +++S+ D L + + ++GH VW +
Sbjct: 416 GHSGPVYSATFSP---PGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFG 472
Query: 343 NLAASGAADFTAKLWDA-RYGDMVHTFEHEHIVKSVNFNADDTLLVTASNEKLIRVFDLN 519
+ AS + D TA++W R + H + V+++ + + T S++K +R++D+
Sbjct: 473 HYFASCSHDRTARIWSMDRIQPLRIMAGH---LSDVDWHPNCNYIATGSSDKTVRLWDVQ 529
Query: 520 KLEAGPIEKINGHTSSIRHAVFLNNSRIVSVSD-DNTMRVWDRNSGEEVQK-VEFQSVPN 693
E + GH S + + R ++ D D T+ +WD ++ + + S
Sbjct: 530 TGEC--VRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVW 587
Query: 694 SLXLSRDGAIL 726
SL S +G++L
Sbjct: 588 SLSYSGEGSLL 598
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 56.4 bits (130), Expect = 2e-08
Identities = 34/117 (29%), Positives = 58/117 (49%), Gaps = 3/117 (2%)
Frame = +1
Query: 298 GHKGAVWGVALTQNANLAASGAADFTAKLWDARYG-DMVHTFEHEHIVKSVNFNADDTLL 474
GH V V +L SG D KLWD R G ++ H++IV SV +N + L
Sbjct: 266 GHGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQNGNWL 325
Query: 475 VTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVF--LNNSRIVSVSDDNTMRVW 639
+TAS +++I+++D+ ++ ++ GHT + + + VS S D ++ W
Sbjct: 326 LTASKDQIIKLYDIRTMK--ELQSFRGHTKDVTSLAWHPCHEEYFVSGSSDGSICHW 380
Score = 40.3 bits (90), Expect = 0.002
Identities = 39/145 (26%), Positives = 65/145 (44%), Gaps = 3/145 (2%)
Frame = +1
Query: 223 LISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALTQNANLAASGAADFTAKLWDARYG 402
L+S KD L +G + + GHK V V QN N + + D KL+D R
Sbjct: 283 LVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQNGNWLLTASKDQIIKLYDIRTM 342
Query: 403 DMVHTFE-HEHIVKSVNFN-ADDTLLVTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRH 576
+ +F H V S+ ++ + V+ S++ I + + E IE N H +S+
Sbjct: 343 KELQSFRGHTKDVTSLAWHPCHEEYFVSGSSDGSICHWIVGH-ENPQIEIPNAHDNSVWD 401
Query: 577 AVFLNNSRIV-SVSDDNTMRVWDRN 648
+ ++ S S+D+T + W RN
Sbjct: 402 LAWHPIGYLLCSGSNDHTTKFWCRN 426
Score = 35.5 bits (78), Expect = 0.046
Identities = 21/94 (22%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Frame = +1
Query: 388 DARYGDMVHTFEHEHIVKSVNFNADDTLLVTASNEKLIRVFDLNKLEAGPIEKINGHTSS 567
+ R+G M H VKSV+++ +LLV+ ++L++++D + ++GH +
Sbjct: 255 EIRFGVMPCNAGHGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTR--SGRELCSLHGHKNI 312
Query: 568 IRHAVFLNNSR-IVSVSDDNTMRVWDRNSGEEVQ 666
+ + N +++ S D ++++D + +E+Q
Sbjct: 313 VLSVKWNQNGNWLLTASKDQIIKLYDIRTMKELQ 346
Score = 32.3 bits (70), Expect = 0.42
Identities = 23/101 (22%), Positives = 48/101 (47%), Gaps = 2/101 (1%)
Frame = +1
Query: 346 LAASGAADFTAKLWDARYGDMVHTFE-HEHIVKSVNFNADDTLLVTASNEKLIRVFDLNK 522
+ S + +FT LW+ + + + H+ ++S+ ++ ++ +V+ + ++ + N
Sbjct: 139 ITGSQSGEFT--LWNGQSFNFEMILQAHDQPIRSMVWSHNENYMVSGDDGGTLKYWQ-NN 195
Query: 523 LEAGPIEKINGHTSSIRHAVFLNNS-RIVSVSDDNTMRVWD 642
+ K H SIR F + S SDD T++VWD
Sbjct: 196 MNNVKANK-TAHKESIRDLSFCKTDLKFCSCSDDTTVKVWD 235
>At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1)
identical to phytochrome A supressor spa1 (GI:4809171)
[Arabidopsis thaliana]; contains 8 WD-40 repeats (Pfam
PF00400) (1 weak)
Length = 1029
Score = 55.6 bits (128), Expect = 4e-08
Identities = 37/145 (25%), Positives = 65/145 (44%), Gaps = 2/145 (1%)
Frame = +1
Query: 220 YLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALT-QNANLAASGAADFTAKLWDAR 396
YL S DG + TG + H+ W V + + SG+ D + KLW
Sbjct: 780 YLASTDYDGVVQIWDAGTGQGFSQYTEHQKRAWSVDFSPSDPTKFVSGSDDCSVKLWSIN 839
Query: 397 YGDMVHTFEHEHIVKSVNFNA-DDTLLVTASNEKLIRVFDLNKLEAGPIEKINGHTSSIR 573
+ T V V F++ + LL S + + +DL ++ P + GH ++
Sbjct: 840 EKRSLGTIWSPANVCCVQFSSYSNHLLAFGSADYKVYCYDLRYVKT-PWCTLAGHEKAVS 898
Query: 574 HAVFLNNSRIVSVSDDNTMRVWDRN 648
+ F+++ IVS S DN++++W+ N
Sbjct: 899 YVKFMDSETIVSASTDNSLKLWNLN 923
>At1g79990.1 68414.m09356 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606)
[Homo sapiens]; similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus
musculus]
Length = 920
Score = 55.6 bits (128), Expect = 4e-08
Identities = 41/141 (29%), Positives = 65/141 (46%), Gaps = 6/141 (4%)
Frame = +1
Query: 271 TGDWIGTFEGHKGAVWGVALTQNANLAASGAADFTAKLWDARYGDM-VHTFE-HEHIVKS 444
T D I FE H + VA+ S + D KLWD G + FE H H V
Sbjct: 88 TMDKIKVFEAHADYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWLCTQIFEGHSHYVMQ 147
Query: 445 VNFNADDT-LLVTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVFL---NNSRIVSV 612
V FN DT +AS ++ I++++L + P ++ H + + + +++
Sbjct: 148 VTFNPKDTNTFASASLDRTIKIWNLGSPD--PNFTLDAHLKGVNCVDYFTGGDKPYLITG 205
Query: 613 SDDNTMRVWDRNSGEEVQKVE 675
SDD+T +VWD + VQ +E
Sbjct: 206 SDDHTAKVWDYQTKSCVQTLE 226
Score = 51.2 bits (117), Expect = 9e-07
Identities = 42/147 (28%), Positives = 68/147 (46%), Gaps = 7/147 (4%)
Frame = +1
Query: 220 YLISACKDGKPMLRQGETGDWIGT--FEGHKGAVWGVALT-QNANLAASGAADFTAKLWD 390
Y++S+ D L E G W+ T FEGH V V ++ N AS + D T K+W+
Sbjct: 113 YVLSSSDDMLIKLWDWEKG-WLCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWN 171
Query: 391 ARYGDMVHTFE-HEHIVKSVNF--NADDTLLVTASNEKLIRVFDLNKLEAGPIEKINGHT 561
D T + H V V++ D L+T S++ +V+D ++ + GHT
Sbjct: 172 LGSPDPNFTLDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSC--VQTLEGHT 229
Query: 562 SSIRHAVFLNNSRIVSV-SDDNTMRVW 639
++ F I+ S+D T+R+W
Sbjct: 230 HNVSAVSFHPELPIIITGSEDGTVRIW 256
Score = 31.5 bits (68), Expect = 0.74
Identities = 21/80 (26%), Positives = 34/80 (42%)
Frame = +1
Query: 154 TCGGHTRPVVHLDFSDVTKDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALT 333
T H + V +D+ D YLI+ D + +T + T EGH V V+
Sbjct: 180 TLDAHLKGVNCVDYF-TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFH 238
Query: 334 QNANLAASGAADFTAKLWDA 393
+ +G+ D T ++W A
Sbjct: 239 PELPIIITGSEDGTVRIWHA 258
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 55.6 bits (128), Expect = 4e-08
Identities = 44/164 (26%), Positives = 70/164 (42%), Gaps = 4/164 (2%)
Frame = +1
Query: 163 GHTRPVVHLDFSDVTKDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALTQNA 342
GH L D+ + IS KDG + TG + + H +V V + ++
Sbjct: 237 GHPYHTEGLTCLDINSNSSLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSS 296
Query: 343 N---LAASGAADFTAKLWDARYGDMVHTFEHEHIVKSVNFNADDTLLVTASNEKLIRVFD 513
LAA+G D +WD ++ EHE V S+ + L T + ++D
Sbjct: 297 ATIPLAATGGMDKKLIIWDLQHSTPRFICEHEEGVTSLTWIGTSKYLATGCANGTVSIWD 356
Query: 514 LNKLEAGPIEKINGHTSSIRH-AVFLNNSRIVSVSDDNTMRVWD 642
L + +GH +++ +V N IVSVS DNT RV++
Sbjct: 357 --SLLGNCVHTYHGHQDAVQAISVSTNTDFIVSVSVDNTARVFE 398
Score = 47.6 bits (108), Expect = 1e-05
Identities = 34/147 (23%), Positives = 71/147 (48%), Gaps = 2/147 (1%)
Frame = +1
Query: 241 DGKPMLRQGETGDWIGTFEGHKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHTF 420
D K L + GDW GHK +V +A + + L ASG D +++DA G +
Sbjct: 92 DDKAFLWKIGNGDWAAELPGHKDSVSCLAFSYDGQLLASGGLDGVVQIFDASSGTLKCVL 151
Query: 421 EHEHI-VKSVNFNADDTLLVTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVFLNNS 597
+ ++ V ++ +++ S + + +++ +K EA + +GH ++ F +
Sbjct: 152 DGPGAGIEWVRWHPRGHIVLAGSEDCSLWMWNADK-EA-YLNMFSGHNLNVTCGDFTPDG 209
Query: 598 RIVSV-SDDNTMRVWDRNSGEEVQKVE 675
+++ SDD ++ VW+ + E + V+
Sbjct: 210 KLICTGSDDASLIVWNPKTCESIHIVK 236
Score = 43.6 bits (98), Expect = 2e-04
Identities = 19/77 (24%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = +1
Query: 301 HKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHTFE-HEHIVKSVNFNADDTLLV 477
H+ V + + A+G A+ T +WD+ G+ VHT+ H+ V++++ + + +V
Sbjct: 327 HEEGVTSLTWIGTSKYLATGCANGTVSIWDSLLGNCVHTYHGHQDAVQAISVSTNTDFIV 386
Query: 478 TASNEKLIRVFDLNKLE 528
+ S + RVF+ ++ +
Sbjct: 387 SVSVDNTARVFESSEFQ 403
Score = 40.3 bits (90), Expect = 0.002
Identities = 26/151 (17%), Positives = 67/151 (44%), Gaps = 8/151 (5%)
Frame = +1
Query: 214 GYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALTQNANLAASGAADFTAKLWDA 393
G+ +++ +D + + ++ F GH V T + L +G+ D + +W+
Sbjct: 167 GHIVLAGSEDCSLWMWNADKEAYLNMFSGHNLNVTCGDFTPDGKLICTGSDDASLIVWNP 226
Query: 394 RYGDMVHTFE----HEHIVKSVNFNADDTLLVTASNEKLIRVFDLNKLEAGPIEKINGHT 561
+ + +H + H + ++ N++ +L ++ S + + + +N + + +N HT
Sbjct: 227 KTCESIHIVKGHPYHTEGLTCLDINSNSSLAISGSKDGSVHI--VNIVTGKVVSSLNSHT 284
Query: 562 SSIRHAVFLNNSRIVSVSD----DNTMRVWD 642
S+ F +S + ++ D + +WD
Sbjct: 285 DSVECVKFSPSSATIPLAATGGMDKKLIIWD 315
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 55.2 bits (127), Expect = 5e-08
Identities = 41/172 (23%), Positives = 76/172 (44%), Gaps = 3/172 (1%)
Frame = +1
Query: 175 PVVHLDFSDVTKDGYYLISACKDGKPMLR-QGETGDWIGTFEGHKGAVWGVALTQNANLA 351
P H++ ++T D +YL +AC + + + T++ H V V +A
Sbjct: 34 PDSHVNRLEITPDKHYLAAACNPHIRLFDVNSNSPQPVMTYDSHTNNVMAVGFQCDAKWM 93
Query: 352 ASGAADFTAKLWDARYGDMVHTFEHEHIVKSVNFNADDTLLVTASNEKLIRVFDL--NKL 525
SG+ D T K+WD R +E V +V + + T L++ IRV+DL N
Sbjct: 94 YSGSEDGTVKIWDLRAPGCQKEYESVAAVNTVVLHPNQTELISGDQNGNIRVWDLRANSC 153
Query: 526 EAGPIEKINGHTSSIRHAVFLNNSRIVSVSDDNTMRVWDRNSGEEVQKVEFQ 681
+ +++ S+ V + + +V+ ++ T VW G++ EF+
Sbjct: 154 SCELVPEVDTAVRSL--TVMWDGTMVVAANNRGTCYVWRLLRGKQTM-TEFE 202
Score = 50.8 bits (116), Expect = 1e-06
Identities = 33/122 (27%), Positives = 63/122 (51%), Gaps = 2/122 (1%)
Frame = +1
Query: 328 LTQNANLAASGAADFTAKLWDARYGDMVHTFEH-EHIVKSVNFNADDTLLVTASNEKLIR 504
++Q + + A+ + D T + W+A G T ++ + V + D L A N IR
Sbjct: 1 MSQPSVILATASYDHTIRFWEAETGRCYRTIQYPDSHVNRLEITPDKHYLAAACNPH-IR 59
Query: 505 VFDLNKLEAGPIEKINGHTSSIRHAVFLNNSR-IVSVSDDNTMRVWDRNSGEEVQKVEFQ 681
+FD+N P+ + HT+++ F +++ + S S+D T+++WD + QK E++
Sbjct: 60 LFDVNSNSPQPVMTYDSHTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLRA-PGCQK-EYE 117
Query: 682 SV 687
SV
Sbjct: 118 SV 119
Score = 38.3 bits (85), Expect = 0.006
Identities = 23/81 (28%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Frame = +1
Query: 430 HIVKSVNFNADDTLLVTASNEKLIRVFDLNKLEAGPIEKI-NGHTSSIRHAVF-LNNSRI 603
HI+K + + + L TAS++K +++++++ + +EK+ GH + VF ++ +
Sbjct: 213 HILKCL-LSPANKYLATASSDKTVKIWNVDGFK---LEKVLTGHQRWVWDCVFSVDGEFL 268
Query: 604 VSVSDDNTMRVWDRNSGEEVQ 666
V+ S D T R+W +G+EV+
Sbjct: 269 VTASSDMTARLWSMPAGKEVK 289
Score = 31.9 bits (69), Expect = 0.56
Identities = 12/45 (26%), Positives = 21/45 (46%)
Frame = +1
Query: 298 GHKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHTFEHEH 432
GH+ VW + + + ++D TA+LW G V ++ H
Sbjct: 251 GHQRWVWDCVFSVDGEFLVTASSDMTARLWSMPAGKEVKVYQGHH 295
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/75 (24%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = +1
Query: 295 EGHKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHTFE-HEHIVKSVNFNADDTL 471
+ H G + L+ A+ ++D T K+W+ + H+ V F+ D
Sbjct: 208 QAHNGHILKCLLSPANKYLATASSDKTVKIWNVDGFKLEKVLTGHQRWVWDCVFSVDGEF 267
Query: 472 LVTASNEKLIRVFDL 516
LVTAS++ R++ +
Sbjct: 268 LVTASSDMTARLWSM 282
>At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 55.2 bits (127), Expect = 5e-08
Identities = 32/116 (27%), Positives = 60/116 (51%), Gaps = 2/116 (1%)
Frame = +1
Query: 301 HKGAVWGVALTQ-NANLAASGAADFTAKLWDARYGDMVHTFEHEHIVKSVNFNADD-TLL 474
H+ VW + + + L ASG+ D + KLW G + T + + + V F ++ L
Sbjct: 575 HEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANICCVQFPSETGRSL 634
Query: 475 VTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVFLNNSRIVSVSDDNTMRVWD 642
S + + +DL + P+ + GH ++ + F+++S +VS S DNT+++WD
Sbjct: 635 AFGSADHKVYYYDLRNPKL-PLCTMIGHHKTVSYVRFVDSSTLVSSSTDNTLKLWD 689
>At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 55.2 bits (127), Expect = 5e-08
Identities = 32/116 (27%), Positives = 60/116 (51%), Gaps = 2/116 (1%)
Frame = +1
Query: 301 HKGAVWGVALTQ-NANLAASGAADFTAKLWDARYGDMVHTFEHEHIVKSVNFNADD-TLL 474
H+ VW + + + L ASG+ D + KLW G + T + + + V F ++ L
Sbjct: 575 HEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANICCVQFPSETGRSL 634
Query: 475 VTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVFLNNSRIVSVSDDNTMRVWD 642
S + + +DL + P+ + GH ++ + F+++S +VS S DNT+++WD
Sbjct: 635 AFGSADHKVYYYDLRNPKL-PLCTMIGHHKTVSYVRFVDSSTLVSSSTDNTLKLWD 689
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 55.2 bits (127), Expect = 5e-08
Identities = 40/141 (28%), Positives = 64/141 (45%), Gaps = 6/141 (4%)
Frame = +1
Query: 271 TGDWIGTFEGHKGAVWGVALTQNANLAASGAADFTAKLWDARYG-DMVHTFE-HEHIVKS 444
T D + FE H + VA+ S + D KLWD G FE H H V
Sbjct: 88 TMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWACTQIFEGHSHYVMQ 147
Query: 445 VNFNADDT-LLVTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVFL---NNSRIVSV 612
V FN DT +AS ++ I++++L + P ++ H + + + +++
Sbjct: 148 VTFNPKDTNTFASASLDRTIKIWNLGSPD--PNFTLDAHQKGVNCVDYFTGGDKPYLITG 205
Query: 613 SDDNTMRVWDRNSGEEVQKVE 675
SDD+T +VWD + VQ +E
Sbjct: 206 SDDHTAKVWDYQTKSCVQTLE 226
Score = 52.4 bits (120), Expect = 4e-07
Identities = 42/147 (28%), Positives = 68/147 (46%), Gaps = 7/147 (4%)
Frame = +1
Query: 220 YLISACKDGKPMLRQGETGDWIGT--FEGHKGAVWGVALT-QNANLAASGAADFTAKLWD 390
Y++S+ D L E G W T FEGH V V ++ N AS + D T K+W+
Sbjct: 113 YVLSSSDDMLIKLWDWEKG-WACTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWN 171
Query: 391 ARYGDMVHTFE-HEHIVKSVNF--NADDTLLVTASNEKLIRVFDLNKLEAGPIEKINGHT 561
D T + H+ V V++ D L+T S++ +V+D ++ + GHT
Sbjct: 172 LGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSC--VQTLEGHT 229
Query: 562 SSIRHAVFLNNSRIVSV-SDDNTMRVW 639
++ F I+ S+D T+R+W
Sbjct: 230 HNVSAVCFHPELPIIITGSEDGTVRIW 256
Score = 31.1 bits (67), Expect = 0.98
Identities = 21/80 (26%), Positives = 33/80 (41%)
Frame = +1
Query: 154 TCGGHTRPVVHLDFSDVTKDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALT 333
T H + V +D+ D YLI+ D + +T + T EGH V V
Sbjct: 180 TLDAHQKGVNCVDYF-TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFH 238
Query: 334 QNANLAASGAADFTAKLWDA 393
+ +G+ D T ++W A
Sbjct: 239 PELPIIITGSEDGTVRIWHA 258
>At1g18080.1 68414.m02238 WD-40 repeat family protein /
auxin-dependent protein (ARCA) / guanine
nucleotide-binding protein beta subunit, putative
identical to SP|O24456 Guanine nucleotide-binding
protein beta subunit-like protein (WD-40 repeat
auxin-dependent protein ARCA) {Arabidopsis thaliana};
contains 7 WD-40 repeats (PF00400)
Length = 327
Score = 55.2 bits (127), Expect = 5e-08
Identities = 52/193 (26%), Positives = 85/193 (44%), Gaps = 10/193 (5%)
Frame = +1
Query: 202 VTKDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALTQNANLAASGAADFTAK 381
++ DG + +S DG+ L G F GH V VA + + S + D T K
Sbjct: 71 LSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIK 130
Query: 382 LWDARYGDMVHTFE-----HEHIVKSVNF--NADDTLLVTASNEKLIRVFDLNKLEAGPI 540
LW+ G+ +T H V V F N +V+AS +K ++V++L+ +
Sbjct: 131 LWNT-LGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLR-- 187
Query: 541 EKINGHTSSIRH-AVFLNNSRIVSVSDDNTMRVWDRNSGEEVQKVEFQSVPNSLXLSRDG 717
+ GHT + AV + S S D + +WD G+++ +E SV ++L S +
Sbjct: 188 STLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALCFSPNR 247
Query: 718 AILTVA--HGTNV 750
L A HG +
Sbjct: 248 YWLCAATEHGIKI 260
Score = 51.6 bits (118), Expect = 6e-07
Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 5/120 (4%)
Frame = +1
Query: 298 GHKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHTF-EHEHIVKSVNFNADDTLL 474
GH V V L+ + A SG+ D +LWD G F H V SV F+ D+ +
Sbjct: 61 GHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQI 120
Query: 475 VTASNEKLIRVFD-LNKLEAGPIEKINGH---TSSIRHAVFLNNSRIVSVSDDNTMRVWD 642
V+AS ++ I++++ L + + E GH S +R + IVS S D T++VW+
Sbjct: 121 VSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWN 180
Score = 43.6 bits (98), Expect = 2e-04
Identities = 24/76 (31%), Positives = 41/76 (53%)
Frame = +1
Query: 289 TFEGHKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHTFEHEHIVKSVNFNADDT 468
T GH G V VA++ + +L ASG D LWD G +++ E ++ ++ F+ +
Sbjct: 189 TLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALCFSPNRY 248
Query: 469 LLVTASNEKLIRVFDL 516
L A+ E I+++DL
Sbjct: 249 WL-CAATEHGIKIWDL 263
>At2g47990.1 68415.m06006 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 5 WD-40 repeats (PF00400); similar to beta
transducin-like protein HET-E2C*4
(GP:17225206)[Podospora anserina]
Length = 530
Score = 54.8 bits (126), Expect = 7e-08
Identities = 55/208 (26%), Positives = 89/208 (42%), Gaps = 7/208 (3%)
Frame = +1
Query: 154 TCGGHTRPVVHLDFSDVTKDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAV-WGVAL 330
T H+ P + + +D +L+S DG I GHK V G
Sbjct: 130 TLRSHSAPARFVKYP--VQDKLHLVSGGDDGVVKYWDVAGATVISDLLGHKDYVRCGDCS 187
Query: 331 TQNANLAASGAADFTAKLWDARY--GDMVHTFEHEHIVKSVNFNADDTLLVTASNEKLIR 504
N ++ +G+ D T K+WDAR + + H V+ V + L+ TA ++
Sbjct: 188 PVNDSMLVTGSYDHTVKVWDARVHTSNWIAEINHGLPVEDVVYLPSGGLIATAGGNS-VK 246
Query: 505 VFDL---NKLEAGPIEKINGHTSSIRHAVFLN-NSRIVSVSDDNTMRVWDRNSGEEVQKV 672
V+DL K+ +E N +S+R A + SR+VSV+ D M+V+D + +
Sbjct: 247 VWDLIGGGKMVCS-MESHNKTVTSLRVARMESAESRLVSVALDGYMKVFDYGRAKVTYSM 305
Query: 673 EFQSVPNSLXLSRDGAILTVAHGTNVSF 756
F + SL LS DG+ + + F
Sbjct: 306 RFPAPLMSLGLSPDGSTRVIGGSNGMVF 333
>At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to WDR protein, form B (GI:14970593) [Mus
musculus]
Length = 1589
Score = 54.8 bits (126), Expect = 7e-08
Identities = 33/135 (24%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Frame = +1
Query: 283 IGTFEGHKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHTFE-HEHIVKSVNFNA 459
I GH+ AV+ ++ +G+ D K+W + + HE + + ++
Sbjct: 298 IKKLRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITDLAVSS 357
Query: 460 DDTLLVTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVFLNNS----RIVSVSDDNT 627
++ L+ +ASN+ +IRV+ L + PI + GHT ++ F +++S SDD T
Sbjct: 358 NNALVASASNDFVIRVWRLP--DGMPISVLRGHTGAVTAIAFSPRQASVYQLLSSSDDGT 415
Query: 628 MRVWDRNSGEEVQKV 672
R+WD + + ++
Sbjct: 416 CRIWDARYSQWLPRI 430
Score = 40.7 bits (91), Expect = 0.001
Identities = 39/162 (24%), Positives = 70/162 (43%), Gaps = 18/162 (11%)
Frame = +1
Query: 208 KDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALTQNANLAASGAADFTAKLW 387
+ G Y+I+ D + ET + + GH+G + +A++ N L AS + DF ++W
Sbjct: 315 RSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITDLAVSSNNALVASASNDFVIRVW 374
Query: 388 DARYGDMVHTFE-HEHIVKSVNFN---ADDTLLVTASNEKLIRVFDLNKLE-------AG 534
G + H V ++ F+ A L+++S++ R++D +
Sbjct: 375 RLPDGMPISVLRGHTGAVTAIAFSPRQASVYQLLSSSDDGTCRIWDARYSQWLPRIYVPS 434
Query: 535 PIEKINGHTS--SIRHAVF-----LNNSRIVSVSDDNTMRVW 639
P + G TS S H + N + V+ S D+ RVW
Sbjct: 435 PSDANTGSTSNASQSHQILCCAYNANGTIFVTGSSDSNARVW 476
>At1g04140.2 68414.m00404 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 793
Score = 54.8 bits (126), Expect = 7e-08
Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 1/107 (0%)
Frame = +1
Query: 205 TKDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVAL-TQNANLAASGAADFTAK 381
+ DG L S D + ETG + GH+ W V +++ + ASG+ D +
Sbjct: 112 SSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASGSLDHEVR 171
Query: 382 LWDARYGDMVHTFEHEHIVKSVNFNADDTLLVTASNEKLIRVFDLNK 522
LW+A+ G+ + T + + S+ F+A LL AS KL ++ NK
Sbjct: 172 LWNAKTGECIRTHDFYRPIASIAFHAGGELLAVASGHKL-HIWHYNK 217
Score = 32.3 bits (70), Expect = 0.42
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 3/100 (3%)
Frame = +1
Query: 451 FNADDTLLVTASNEKLIRVFDLNKLEAGPIEKI-NGHTSSIRHAVFL-NNSRIV-SVSDD 621
F++D L + + +++ D E G KI GH + F +S IV S S D
Sbjct: 111 FSSDGRTLASTHGDHTVKIIDC---ETGKCLKILTGHRRTPWVVRFHPRHSEIVASGSLD 167
Query: 622 NTMRVWDRNSGEEVQKVEFQSVPNSLXLSRDGAILTVAHG 741
+ +R+W+ +GE ++ +F S+ G +L VA G
Sbjct: 168 HEVRLWNAKTGECIRTHDFYRPIASIAFHAGGELLAVASG 207
>At1g04140.1 68414.m00403 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 790
Score = 54.8 bits (126), Expect = 7e-08
Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 1/107 (0%)
Frame = +1
Query: 205 TKDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVAL-TQNANLAASGAADFTAK 381
+ DG L S D + ETG + GH+ W V +++ + ASG+ D +
Sbjct: 112 SSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASGSLDHEVR 171
Query: 382 LWDARYGDMVHTFEHEHIVKSVNFNADDTLLVTASNEKLIRVFDLNK 522
LW+A+ G+ + T + + S+ F+A LL AS KL ++ NK
Sbjct: 172 LWNAKTGECIRTHDFYRPIASIAFHAGGELLAVASGHKL-HIWHYNK 217
Score = 32.3 bits (70), Expect = 0.42
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 3/100 (3%)
Frame = +1
Query: 451 FNADDTLLVTASNEKLIRVFDLNKLEAGPIEKI-NGHTSSIRHAVFL-NNSRIV-SVSDD 621
F++D L + + +++ D E G KI GH + F +S IV S S D
Sbjct: 111 FSSDGRTLASTHGDHTVKIIDC---ETGKCLKILTGHRRTPWVVRFHPRHSEIVASGSLD 167
Query: 622 NTMRVWDRNSGEEVQKVEFQSVPNSLXLSRDGAILTVAHG 741
+ +R+W+ +GE ++ +F S+ G +L VA G
Sbjct: 168 HEVRLWNAKTGECIRTHDFYRPIASIAFHAGGELLAVASG 207
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9
(SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies)
Length = 1677
Score = 54.4 bits (125), Expect = 9e-08
Identities = 35/143 (24%), Positives = 67/143 (46%), Gaps = 6/143 (4%)
Frame = +1
Query: 283 IGTFEGHKGAVWGVALTQNANLAASGAADFTAKLW--DARYGDMVHTFEHEHIVKSVNFN 456
I GH+ AV+ L ++ +G+ D K+W D Y + HE + + +
Sbjct: 238 IKRLRGHRNAVYCAILDRSGRYVITGSDDRLVKVWSMDTAYC-LASCRGHEGDITDLAVS 296
Query: 457 ADDTLLVTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVFLNNS----RIVSVSDDN 624
+++ + +ASN+ +IRV+ L + P+ + GHT ++ F +++S SDD
Sbjct: 297 SNNIFIASASNDCVIRVWRLP--DGLPVSVLRGHTGAVTAIAFSPRPGSPYQLLSSSDDG 354
Query: 625 TMRVWDRNSGEEVQKVEFQSVPN 693
T R+WD + ++ P+
Sbjct: 355 TCRIWDARGAQFAPRIYVPRPPS 377
Score = 33.9 bits (74), Expect = 0.14
Identities = 49/220 (22%), Positives = 83/220 (37%), Gaps = 29/220 (13%)
Frame = +1
Query: 154 TCGGHTRPVVHLDFSDVTKDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALT 333
+C GH + L V+ + ++ SA D + + G + GH GAV +A +
Sbjct: 282 SCRGHEGDITDLA---VSSNNIFIASASNDCVIRVWRLPDGLPVSVLRGHTGAVTAIAFS 338
Query: 334 QNANLA---ASGAADFTAKLWDAR--------------------YGDMVHTFEHEHIVKS 444
S + D T ++WDAR G + H +
Sbjct: 339 PRPGSPYQLLSSSDDGTCRIWDARGAQFAPRIYVPRPPSPDGKNSGPSSSNAQQSHQIFC 398
Query: 445 VNFNADDTLLVTASNEKLIRVFDL---NKLEAGPIEKINGHTSSIR-HAVFLNNSRIVSV 612
FNA ++ VT S++ L RV+ + NK E+ N + H +N +
Sbjct: 399 CAFNASGSVFVTGSSDTLARVYSVWSANKTNTDDPEQPNHEMDVLAGHENDVNYVQFSGC 458
Query: 613 SDDNTMRVWDRNSGEEVQKVE--FQSVPNSLXLSRDGAIL 726
+ + V D + E V K + + N + SRDG+ +
Sbjct: 459 AAGSKFSVTDYSKDENVPKFKNSWFCHDNIVTCSRDGSAI 498
Score = 33.1 bits (72), Expect = 0.24
Identities = 24/114 (21%), Positives = 50/114 (43%), Gaps = 4/114 (3%)
Frame = +1
Query: 208 KDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALTQNANLAASGAADFTAKLW 387
+ G Y+I+ D + +T + + GH+G + +A++ N AS + D ++W
Sbjct: 255 RSGRYVITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLAVSSNNIFIASASNDCVIRVW 314
Query: 388 DARYGDMVHTFE-HEHIVKSVNFN---ADDTLLVTASNEKLIRVFDLNKLEAGP 537
G V H V ++ F+ L+++S++ R++D + P
Sbjct: 315 RLPDGLPVSVLRGHTGAVTAIAFSPRPGSPYQLLSSSDDGTCRIWDARGAQFAP 368
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 53.6 bits (123), Expect = 2e-07
Identities = 51/180 (28%), Positives = 83/180 (46%), Gaps = 14/180 (7%)
Frame = +1
Query: 286 GTFE-GHKGAVWGVALT-QNANLAASGAADFTAKLWDARYGD-MVHTFE-HEHIVKSVNF 453
G F+ GH V V+++ N N SG+ D TA+LWD R V TF HE V +V F
Sbjct: 135 GEFQSGHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKF 194
Query: 454 NADDTLLVTASNEKLIRVFDLNKLEAGPIEKI--NGHTSSIRHAVFLNNSRIV--SVSDD 621
D T S++ R++D+ + + +G + F + R++ + +
Sbjct: 195 FPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIAFSVSGRLLFAGYASN 254
Query: 622 NTMRVWDRNSGEEV-----QKVEFQSVPNSLXLSRDG-AILTVAHGTNVSFYTSDTMRKL 783
NT VWD GE V Q+ ++ + L LS DG A+ T + +N+ + R++
Sbjct: 255 NTCYVWDTLLGEVVLDLGLQQDSHRNRISCLGLSADGSALCTGSWDSNLKIWAFGGHRRV 314
Score = 35.1 bits (77), Expect = 0.060
Identities = 20/87 (22%), Positives = 38/87 (43%)
Frame = +1
Query: 163 GHTRPVVHLDFSDVTKDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALTQNA 342
GHT V+ + S + +++ +C + + TF GH+G V V +
Sbjct: 140 GHTADVLSVSISG-SNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDG 198
Query: 343 NLAASGAADFTAKLWDARYGDMVHTFE 423
+G+ D T +L+D R G + ++
Sbjct: 199 YRFGTGSDDGTCRLYDIRTGHQLQVYQ 225
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 53.6 bits (123), Expect = 2e-07
Identities = 51/180 (28%), Positives = 83/180 (46%), Gaps = 14/180 (7%)
Frame = +1
Query: 286 GTFE-GHKGAVWGVALT-QNANLAASGAADFTAKLWDARYGD-MVHTFE-HEHIVKSVNF 453
G F+ GH V V+++ N N SG+ D TA+LWD R V TF HE V +V F
Sbjct: 197 GEFQSGHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKF 256
Query: 454 NADDTLLVTASNEKLIRVFDLNKLEAGPIEKI--NGHTSSIRHAVFLNNSRIV--SVSDD 621
D T S++ R++D+ + + +G + F + R++ + +
Sbjct: 257 FPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIAFSVSGRLLFAGYASN 316
Query: 622 NTMRVWDRNSGEEV-----QKVEFQSVPNSLXLSRDG-AILTVAHGTNVSFYTSDTMRKL 783
NT VWD GE V Q+ ++ + L LS DG A+ T + +N+ + R++
Sbjct: 317 NTCYVWDTLLGEVVLDLGLQQDSHRNRISCLGLSADGSALCTGSWDSNLKIWAFGGHRRV 376
Score = 35.5 bits (78), Expect = 0.046
Identities = 32/142 (22%), Positives = 59/142 (41%), Gaps = 10/142 (7%)
Frame = +1
Query: 289 TFEGHKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHTFEHEHI-VKSVNFNADD 465
T +GH G V+ + T N S + D +W+A H + V + F+ +
Sbjct: 60 TLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNG 119
Query: 466 TLLVTASNEKLIRVFDL----NKLEAGPIEK-INGHTSSIRHAVFLNN--SRIVSVSDDN 624
+ + + +F L +K P+ + + GH + ++ N + +++ S D
Sbjct: 120 QSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQ 179
Query: 625 TMRVWDRNSG--EEVQKVEFQS 684
T +WD +G V EFQS
Sbjct: 180 TCILWDVTTGLKTSVFGGEFQS 201
Score = 35.1 bits (77), Expect = 0.060
Identities = 20/87 (22%), Positives = 38/87 (43%)
Frame = +1
Query: 163 GHTRPVVHLDFSDVTKDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALTQNA 342
GHT V+ + S + +++ +C + + TF GH+G V V +
Sbjct: 202 GHTADVLSVSISG-SNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDG 260
Query: 343 NLAASGAADFTAKLWDARYGDMVHTFE 423
+G+ D T +L+D R G + ++
Sbjct: 261 YRFGTGSDDGTCRLYDIRTGHQLQVYQ 287
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 53.6 bits (123), Expect = 2e-07
Identities = 49/207 (23%), Positives = 90/207 (43%), Gaps = 4/207 (1%)
Frame = +1
Query: 151 LTCGGHTRPVVHLDFSDVTKDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVAL 330
LT GH V L V+ Y+ SA D + E I ++ GH V+ +AL
Sbjct: 212 LTLTGHIEQVRGLA---VSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLAL 268
Query: 331 TQNANLAASGAADFTAKLWDARYGDMVHTFE-HEHIVKSVNFNADDTLLVTASNEKLIRV 507
++ +G D ++WD R + H++ V SV D +VT S++ I+
Sbjct: 269 HPTLDVLLTGGRDSVCRVWDIRTKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKF 328
Query: 508 FDLNKLEAGPIEKINGHTSSIR-HAVFLNNSRIVSVSDDNTMRVWDRNSGEEVQKV--EF 678
+DL + + H S+R + + S S DNT + + GE + +
Sbjct: 329 WDLR--YGKTMSTLTHHKKSVRAMTLHPKENAFASASADNTKK-FSLPKGEFCHNMLSQQ 385
Query: 679 QSVPNSLXLSRDGAILTVAHGTNVSFY 759
+++ N++ ++ DG ++T ++ F+
Sbjct: 386 KTIINAMAVNEDGVMVTGGDNGSIWFW 412
Score = 50.4 bits (115), Expect = 1e-06
Identities = 39/160 (24%), Positives = 77/160 (48%), Gaps = 5/160 (3%)
Frame = +1
Query: 295 EGHKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHTFE-HEHIVKSVNFNADDTL 471
+GH G V VA + +G+AD T K+WD G + T H V+ + + T
Sbjct: 173 QGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHTY 232
Query: 472 LVTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVFLNNSRIVSVSD--DNTMRVWDR 645
+ +A ++K ++ +DL + + I +GH S + + + L+ + V ++ D+ RVWD
Sbjct: 233 MFSAGDDKQVKCWDLEQNKV--IRSYHGHLSGV-YCLALHPTLDVLLTGGRDSVCRVWDI 289
Query: 646 NSGEEVQKV--EFQSVPNSLXLSRDGAILTVAHGTNVSFY 759
+ ++ + +V + D ++T +H T + F+
Sbjct: 290 RTKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFW 329
Score = 48.0 bits (109), Expect = 8e-06
Identities = 37/141 (26%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Frame = +1
Query: 283 IGTFEGHKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHTF-EHEHIVKSVNFNA 459
I GH V V +G+ D T K WD RYG + T H+ V+++ +
Sbjct: 295 IFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHP 354
Query: 460 DDTLLVTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVFLNNSRIVSVSDDN-TMRV 636
+ +AS + + F L K E + +I +A+ +N ++ DN ++
Sbjct: 355 KENAFASASADN-TKKFSLPKGEF--CHNMLSQQKTIINAMAVNEDGVMVTGGDNGSIWF 411
Query: 637 WDRNSGEEVQKVEFQSVPNSL 699
WD SG Q+ E P SL
Sbjct: 412 WDWKSGHSFQQSETIVQPGSL 432
>At5g52250.1 68418.m06485 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to photomorphogenesis repressor PnCOP1
(GI:11127996) [Ipomoea nil]
Length = 385
Score = 53.2 bits (122), Expect = 2e-07
Identities = 34/123 (27%), Positives = 64/123 (52%), Gaps = 6/123 (4%)
Frame = +1
Query: 313 VWGVALT-QNANL-AASGAADFTAKLWDARYGDMVHTFEHEH---IVKSVNFNA-DDTLL 474
+W V T N +L ASG+ D T ++WD R G + + SV F+ + +
Sbjct: 169 IWSVDYTLYNGSLIGASGSDDGTVQMWDPRNGGTLEETVRPGGGAAICSVEFDPFGGSSI 228
Query: 475 VTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVFLNNSRIVSVSDDNTMRVWDRNSG 654
++ V+D+ +L P+ ++GHT ++ +A F+++ IV+ S D +++ WD ++G
Sbjct: 229 AVGCADRNAYVYDIRRL-VDPLIVLDGHTKTVTYARFMDSHTIVTGSTDGSLKQWDIDNG 287
Query: 655 EEV 663
V
Sbjct: 288 RRV 290
>At3g49180.1 68416.m05375 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
GTP-binding protein beta chain homolog, Nicotiana
tabacum, PIR:T16970
Length = 438
Score = 53.2 bits (122), Expect = 2e-07
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 13/127 (10%)
Frame = +1
Query: 382 LWDARYGDMVHTFE-HEHIVKSVNFNADDTLLVTASNE------KLIRVFDLNKLEAGPI 540
LW+ G ++ + H V + F+ DD+LLV+ S + LIR+FD + + G
Sbjct: 104 LWEVATGKLLKKWHGHYRSVTCLVFSGDDSLLVSGSQDGSIRVWSLIRLFDDFQRQQGNT 163
Query: 541 ---EKINGHTSSIRHAVFLN---NSRIVSVSDDNTMRVWDRNSGEEVQKVEFQSVPNSLX 702
N HT S+ V N+ I+S S+D T +VW + G+ ++ + F SV N+L
Sbjct: 164 LYEHNFNEHTMSVTDIVIDYGGCNAVIISSSEDRTCKVWSLSRGKLLKNIIFPSVINALA 223
Query: 703 LSRDGAI 723
L G +
Sbjct: 224 LDPGGCV 230
>At3g15980.3 68416.m02022 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 53.2 bits (122), Expect = 2e-07
Identities = 42/147 (28%), Positives = 69/147 (46%), Gaps = 7/147 (4%)
Frame = +1
Query: 220 YLISACKDGKPMLRQGETGDWIGT--FEGHKGAVWGVALT-QNANLAASGAADFTAKLWD 390
Y++S+ D L E G W T FEGH V V ++ N AS + D T K+W+
Sbjct: 113 YVLSSSDDMLIKLWDWENG-WACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWN 171
Query: 391 ARYGDMVHTFE-HEHIVKSVNF--NADDTLLVTASNEKLIRVFDLNKLEAGPIEKINGHT 561
D T + H+ V V++ D L+T S++ +V+D ++ ++GHT
Sbjct: 172 LGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSC--VQTLDGHT 229
Query: 562 SSIRHAVFLNNSRIVSV-SDDNTMRVW 639
++ F I+ S+D T+R+W
Sbjct: 230 HNVSAVCFHPELPIIITGSEDGTVRIW 256
Score = 52.8 bits (121), Expect = 3e-07
Identities = 39/141 (27%), Positives = 64/141 (45%), Gaps = 6/141 (4%)
Frame = +1
Query: 271 TGDWIGTFEGHKGAVWGVALTQNANLAASGAADFTAKLWDARYG-DMVHTFE-HEHIVKS 444
T D + FE H + VA+ S + D KLWD G FE H H V
Sbjct: 88 TMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQ 147
Query: 445 VNFNADDT-LLVTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVFL---NNSRIVSV 612
V FN DT +AS ++ I++++L + P ++ H + + + +++
Sbjct: 148 VVFNPKDTNTFASASLDRTIKIWNLGSPD--PNFTLDAHQKGVNCVDYFTGGDKPYLITG 205
Query: 613 SDDNTMRVWDRNSGEEVQKVE 675
SDD+T +VWD + VQ ++
Sbjct: 206 SDDHTAKVWDYQTKSCVQTLD 226
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/80 (25%), Positives = 33/80 (41%)
Frame = +1
Query: 154 TCGGHTRPVVHLDFSDVTKDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALT 333
T H + V +D+ D YLI+ D + +T + T +GH V V
Sbjct: 180 TLDAHQKGVNCVDYF-TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFH 238
Query: 334 QNANLAASGAADFTAKLWDA 393
+ +G+ D T ++W A
Sbjct: 239 PELPIIITGSEDGTVRIWHA 258
>At3g15980.2 68416.m02021 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 53.2 bits (122), Expect = 2e-07
Identities = 42/147 (28%), Positives = 69/147 (46%), Gaps = 7/147 (4%)
Frame = +1
Query: 220 YLISACKDGKPMLRQGETGDWIGT--FEGHKGAVWGVALT-QNANLAASGAADFTAKLWD 390
Y++S+ D L E G W T FEGH V V ++ N AS + D T K+W+
Sbjct: 113 YVLSSSDDMLIKLWDWENG-WACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWN 171
Query: 391 ARYGDMVHTFE-HEHIVKSVNF--NADDTLLVTASNEKLIRVFDLNKLEAGPIEKINGHT 561
D T + H+ V V++ D L+T S++ +V+D ++ ++GHT
Sbjct: 172 LGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSC--VQTLDGHT 229
Query: 562 SSIRHAVFLNNSRIVSV-SDDNTMRVW 639
++ F I+ S+D T+R+W
Sbjct: 230 HNVSAVCFHPELPIIITGSEDGTVRIW 256
Score = 52.8 bits (121), Expect = 3e-07
Identities = 39/141 (27%), Positives = 64/141 (45%), Gaps = 6/141 (4%)
Frame = +1
Query: 271 TGDWIGTFEGHKGAVWGVALTQNANLAASGAADFTAKLWDARYG-DMVHTFE-HEHIVKS 444
T D + FE H + VA+ S + D KLWD G FE H H V
Sbjct: 88 TMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQ 147
Query: 445 VNFNADDT-LLVTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVFL---NNSRIVSV 612
V FN DT +AS ++ I++++L + P ++ H + + + +++
Sbjct: 148 VVFNPKDTNTFASASLDRTIKIWNLGSPD--PNFTLDAHQKGVNCVDYFTGGDKPYLITG 205
Query: 613 SDDNTMRVWDRNSGEEVQKVE 675
SDD+T +VWD + VQ ++
Sbjct: 206 SDDHTAKVWDYQTKSCVQTLD 226
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/80 (25%), Positives = 33/80 (41%)
Frame = +1
Query: 154 TCGGHTRPVVHLDFSDVTKDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALT 333
T H + V +D+ D YLI+ D + +T + T +GH V V
Sbjct: 180 TLDAHQKGVNCVDYF-TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFH 238
Query: 334 QNANLAASGAADFTAKLWDA 393
+ +G+ D T ++W A
Sbjct: 239 PELPIIITGSEDGTVRIWHA 258
>At3g15980.1 68416.m02020 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 909
Score = 53.2 bits (122), Expect = 2e-07
Identities = 42/147 (28%), Positives = 69/147 (46%), Gaps = 7/147 (4%)
Frame = +1
Query: 220 YLISACKDGKPMLRQGETGDWIGT--FEGHKGAVWGVALT-QNANLAASGAADFTAKLWD 390
Y++S+ D L E G W T FEGH V V ++ N AS + D T K+W+
Sbjct: 113 YVLSSSDDMLIKLWDWENG-WACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWN 171
Query: 391 ARYGDMVHTFE-HEHIVKSVNF--NADDTLLVTASNEKLIRVFDLNKLEAGPIEKINGHT 561
D T + H+ V V++ D L+T S++ +V+D ++ ++GHT
Sbjct: 172 LGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSC--VQTLDGHT 229
Query: 562 SSIRHAVFLNNSRIVSV-SDDNTMRVW 639
++ F I+ S+D T+R+W
Sbjct: 230 HNVSAVCFHPELPIIITGSEDGTVRIW 256
Score = 52.8 bits (121), Expect = 3e-07
Identities = 39/141 (27%), Positives = 64/141 (45%), Gaps = 6/141 (4%)
Frame = +1
Query: 271 TGDWIGTFEGHKGAVWGVALTQNANLAASGAADFTAKLWDARYG-DMVHTFE-HEHIVKS 444
T D + FE H + VA+ S + D KLWD G FE H H V
Sbjct: 88 TMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQ 147
Query: 445 VNFNADDT-LLVTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVFL---NNSRIVSV 612
V FN DT +AS ++ I++++L + P ++ H + + + +++
Sbjct: 148 VVFNPKDTNTFASASLDRTIKIWNLGSPD--PNFTLDAHQKGVNCVDYFTGGDKPYLITG 205
Query: 613 SDDNTMRVWDRNSGEEVQKVE 675
SDD+T +VWD + VQ ++
Sbjct: 206 SDDHTAKVWDYQTKSCVQTLD 226
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/80 (25%), Positives = 33/80 (41%)
Frame = +1
Query: 154 TCGGHTRPVVHLDFSDVTKDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALT 333
T H + V +D+ D YLI+ D + +T + T +GH V V
Sbjct: 180 TLDAHQKGVNCVDYF-TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFH 238
Query: 334 QNANLAASGAADFTAKLWDA 393
+ +G+ D T ++W A
Sbjct: 239 PELPIIITGSEDGTVRIWHA 258
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 52.8 bits (121), Expect = 3e-07
Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 2/119 (1%)
Frame = +1
Query: 298 GHKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHT-FEHEHIVKSVNFNADDTLL 474
GHK V + ++ + L +G+ D K+W +GD + F H V V F + L
Sbjct: 580 GHKLPVMCIDISSDGELIVTGSQDKNLKIWGLDFGDCHKSIFAHGDSVMGVKFVRNTHYL 639
Query: 475 VTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVFLNNSR-IVSVSDDNTMRVWDRN 648
+ ++L++ +D +K E + + GH + I N +V+ S D +MR WDR+
Sbjct: 640 FSIGKDRLVKYWDADKFE--HLLTLEGHHAEIWCLAISNRGDFLVTGSHDRSMRRWDRS 696
Score = 44.0 bits (99), Expect = 1e-04
Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 1/111 (0%)
Frame = +1
Query: 241 DGKPMLRQGETGDWIGTFEGHKGAVWGVALTQNANLAASGAADFTAKLWD-ARYGDMVHT 417
DG + E G F HKGAV + + ++ ASG+ D LWD +
Sbjct: 85 DGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSMLASGSKDNDIILWDVVGESGLFRL 144
Query: 418 FEHEHIVKSVNFNADDTLLVTASNEKLIRVFDLNKLEAGPIEKINGHTSSI 570
H V + F LV++S +K +RV+DL ++ ++GH S +
Sbjct: 145 RGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQHC--MQIVSGHHSEV 193
Score = 35.1 bits (77), Expect = 0.060
Identities = 15/61 (24%), Positives = 30/61 (49%)
Frame = +1
Query: 208 KDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALTQNANLAASGAADFTAKLW 387
++ +YL S KD + + + T EGH +W +A++ + +G+ D + + W
Sbjct: 634 RNTHYLFSIGKDRLVKYWDADKFEHLLTLEGHHAEIWCLAISNRGDFLVTGSHDRSMRRW 693
Query: 388 D 390
D
Sbjct: 694 D 694
Score = 28.7 bits (61), Expect = 5.2
Identities = 21/69 (30%), Positives = 27/69 (39%)
Frame = +1
Query: 163 GHTRPVVHLDFSDVTKDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALTQNA 342
GH V L F D G L+S+ KD + ET + GH VW V
Sbjct: 146 GHRDQVTDLVFLD---GGKKLVSSSKDKFLRVWDLETQHCMQIVSGHHSEVWSVDTDPEE 202
Query: 343 NLAASGAAD 369
+G+AD
Sbjct: 203 RYVVTGSAD 211
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 52.4 bits (120), Expect = 4e-07
Identities = 43/170 (25%), Positives = 85/170 (50%), Gaps = 13/170 (7%)
Frame = +1
Query: 301 HKGAVWGVALTQNANLAASGAADFTAKLW---DARYGDMVHTFE-HEHIVKSVNFNADDT 468
HK VW V + + A+ ++D TA +W D ++ HT E H++ V V+++ DDT
Sbjct: 223 HKNEVWFVQFSNSGKYLATASSDCTAIIWKVLDDNKVELKHTLESHQNPVSFVSWSPDDT 282
Query: 469 LLVTASNEKLIRVFDLNKLEAGPIEKINGHTSS----IRHAVFLNNSRIVSVSDD--NTM 630
L+T N ++++++D ++ G + G+ ++ A F +++R+V S D +
Sbjct: 283 KLLTCGNAEVLKLWD---VDTGVLRHTFGNNNTGFTVSSCAWFPDSTRLVCGSSDPERGI 339
Query: 631 RVWDRNSGEEVQKVEFQSVPN--SLXLSRDG-AILTVAHGTNVSFYTSDT 771
+WD G E++ +P L ++ DG +++TV + +T
Sbjct: 340 VMWD-TDGNEIKAWRGTRIPKVVDLAVTPDGESMITVFSDKEIRILNLET 388
Score = 37.1 bits (82), Expect = 0.015
Identities = 16/75 (21%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Frame = +1
Query: 421 EHEHIVKSVNFNADDTLLVTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVF--LNN 594
+ +++++S D + + + S + + +++L + P+E ++GH+ ++ + N
Sbjct: 441 QSKYVIRSCFGGLDSSFIASGSEDSQVYIWNLKNTK--PLEVLSGHSMTVNCVSWNPKNP 498
Query: 595 SRIVSVSDDNTMRVW 639
+ S SDD T+R+W
Sbjct: 499 RMLASASDDQTIRIW 513
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 52.4 bits (120), Expect = 4e-07
Identities = 48/196 (24%), Positives = 87/196 (44%), Gaps = 3/196 (1%)
Frame = +1
Query: 151 LTCGGHTRPVVHLDFSDVTKDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVAL 330
LT GH V L V+ Y+ SA D + E I ++ GH V+ +AL
Sbjct: 206 LTLTGHIGQVRGLA---VSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLAL 262
Query: 331 TQNANLAASGAADFTAKLWDARYGDMVHTFEHEHIVKSVNFNADDTLLVTASNEKLIRVF 510
++ +G D ++WD R + H+ V SV D ++T S++ I+ +
Sbjct: 263 HPTLDVVLTGGRDSVCRVWDIRTKMQIFVLPHDSDVFSVLARPTDPQVITGSHDSTIKFW 322
Query: 511 DLNKLEAGPIEKINGHTSSIR-HAVFLNNSRIVSVSDDNTMRVWDRNSGEEVQKVEF--Q 681
DL ++ + I H ++R A+ + VS S DN ++ + GE + +
Sbjct: 323 DLRYGKS--MATITNHKKTVRAMALHPKENDFVSASADN-IKKFSLPKGEFCHNMLSLQR 379
Query: 682 SVPNSLXLSRDGAILT 729
+ N++ ++ DG ++T
Sbjct: 380 DIINAVAVNEDGVMVT 395
Score = 49.6 bits (113), Expect = 3e-06
Identities = 38/158 (24%), Positives = 74/158 (46%), Gaps = 3/158 (1%)
Frame = +1
Query: 295 EGHKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHTFE-HEHIVKSVNFNADDTL 471
+GH G V VA + +G+AD T K+WD G + T H V+ + + T
Sbjct: 167 QGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRHTY 226
Query: 472 LVTASNEKLIRVFDLNKLEAGPIEKINGHTSSIR-HAVFLNNSRIVSVSDDNTMRVWDRN 648
+ +A ++K ++ +DL + + I +GH + A+ +++ D+ RVWD
Sbjct: 227 MFSAGDDKQVKCWDLEQNKV--IRSYHGHLHGVYCLALHPTLDVVLTGGRDSVCRVWDIR 284
Query: 649 SGEEVQKVEFQS-VPNSLXLSRDGAILTVAHGTNVSFY 759
+ ++ + S V + L D ++T +H + + F+
Sbjct: 285 TKMQIFVLPHDSDVFSVLARPTDPQVITGSHDSTIKFW 322
>At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 (4
significant) WD-40 repeats (PF0400); identical to WD-40
repeat protein MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 507
Score = 52.4 bits (120), Expect = 4e-07
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 11/130 (8%)
Frame = +1
Query: 286 GTFEGHKGAVWGVALTQ-NANLAASGAADFTAKLWDARYG-DMVHTFE--HEHIVKSVNF 453
G + GH+ V VA + +A S D LWDAR G + V E H+ + V++
Sbjct: 286 GVYHGHEDTVEDVAFSPTSAQEFCSVGDDSCLILWDARTGTNPVTKVEKAHDADLHCVDW 345
Query: 454 NA-DDTLLVTASNEKLIRVFDLNKLEA----GPIEKINGHTSSIRHAVFLNNSRIV--SV 612
N DD L++T S + +R+FD KL A PI K GH +++ + + V S
Sbjct: 346 NPHDDNLILTGSADNTVRLFDRRKLTANGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSS 405
Query: 613 SDDNTMRVWD 642
++D + +WD
Sbjct: 406 AEDGLLNIWD 415
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Frame = +1
Query: 532 GPIEKINGHTSSIRHAVFLNNS--RIVSVSDDNTMRVWDRNSG-EEVQKVE 675
GP +GH ++ F S SV DD+ + +WD +G V KVE
Sbjct: 283 GPRGVYHGHEDTVEDVAFSPTSAQEFCSVGDDSCLILWDARTGTNPVTKVE 333
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 51.6 bits (118), Expect = 6e-07
Identities = 37/121 (30%), Positives = 61/121 (50%), Gaps = 6/121 (4%)
Frame = +1
Query: 295 EGHKGAVWGVALTQNANLAASGAADFTAKLWDARYG---DMVHTFE-HEHIVKSVNFNAD 462
E H V A + + L A+ + D T +W YG + + T E HE+ VKSV++NA
Sbjct: 71 ETHTRTVRSCAWSPSGQLLATASFDGTTGIWK-NYGSEFECISTLEGHENEVKSVSWNAS 129
Query: 463 DTLLVTASNEKLIRVFD-LNKLEAGPIEKINGHTSSIRHAVFLNNSRIV-SVSDDNTMRV 636
+ L T S +K + +++ L E + GHT ++ + ++ S S DNT++V
Sbjct: 130 GSCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHPTMDVLFSCSYDNTIKV 189
Query: 637 W 639
W
Sbjct: 190 W 190
Score = 41.9 bits (94), Expect = 5e-04
Identities = 43/171 (25%), Positives = 75/171 (43%), Gaps = 13/171 (7%)
Frame = +1
Query: 166 HTRPVVHLDFSDVTKDGYYLISACKDGKPML--RQGETGDWIGTFEGHKGAVWGVALTQN 339
HTR V +S G L +A DG + G + I T EGH+ V V+ +
Sbjct: 73 HTRTVRSCAWSP---SGQLLATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVSWNAS 129
Query: 340 ANLAASGAADFTAKLWDARYGDMVHTFE----HEHIVKSVNFNADDTLLVTASNEKLIRV 507
+ A+ + D + +W+ G+ H VK V ++ +L + S + I+V
Sbjct: 130 GSCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHPTMDVLFSCSYDNTIKV 189
Query: 508 F----DLNKLEAGPI--EKINGHTSSIRHAVF-LNNSRIVSVSDDNTMRVW 639
+ D + + E NGH+S++ F ++V+ SDD T+++W
Sbjct: 190 WWSEDDDGEYQCVQTLGESNNGHSSTVWSISFNAAGDKMVTCSDDLTLKIW 240
Score = 35.9 bits (79), Expect = 0.035
Identities = 29/137 (21%), Positives = 60/137 (43%), Gaps = 23/137 (16%)
Frame = +1
Query: 298 GHKGAVWGVALTQNANLAASGAADFTAKLWDA---------RYGDMVHTFE----HEHIV 438
GH VW ++ + + + D T K+W Y +H H+ +
Sbjct: 211 GHSSTVWSISFNAAGDKMVTCSDDLTLKIWGTDIAKMQSGEEYAPWIHLCTLSGYHDRTI 270
Query: 439 KSVNFNADDTLLVTASNEKLIRVFDLNKLEA--GP-----IEKINGH---TSSIRHAVFL 588
S +++ DD ++ + + + IR+F +K ++ GP ++K H +S++ +
Sbjct: 271 YSAHWSRDD-IIASGAGDNAIRLFVDSKHDSVDGPSYNLLLKKNKAHENDVNSVQWSPGE 329
Query: 589 NNSRIVSVSDDNTMRVW 639
N + S SDD +++W
Sbjct: 330 GNRLLASASDDGMVKIW 346
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 51.2 bits (117), Expect = 9e-07
Identities = 53/177 (29%), Positives = 75/177 (42%), Gaps = 18/177 (10%)
Frame = +1
Query: 295 EGHKGAVWGVALTQNANLAASGAADFTAKLWDARYGDM--VHT----------------F 420
EGH V A + +A+L ASG+ D TA++W G VHT
Sbjct: 262 EGHTSEVCACAWSPSASLLASGSGDATARIWSIPEGSFKAVHTGRNINALILKHAKGKSN 321
Query: 421 EHEHIVKSVNFNADDTLLVTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVFLNNSR 600
E V ++++N + TLL T S + R++ LN + K G S++
Sbjct: 322 EKSKDVTTLDWNGEGTLLATGSCDGQARIWTLNGELISTLSKHKGPIFSLKWN--KKGDY 379
Query: 601 IVSVSDDNTMRVWDRNSGEEVQKVEFQSVPNSLXLSRDGAILTVAHGTNVSFYTSDT 771
+++ S D T VWD + E Q+ EF S G L V NVSF TS T
Sbjct: 380 LLTGSVDRTAVVWDVKAEEWKQQFEFHS----------GPTLDVDWRNNVSFATSST 426
Score = 50.8 bits (116), Expect = 1e-06
Identities = 35/150 (23%), Positives = 67/150 (44%), Gaps = 2/150 (1%)
Frame = +1
Query: 199 DVTKDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALTQNANLAASGAADFTA 378
D +G L + DG+ + G+ I T HKG ++ + + + +G+ D TA
Sbjct: 331 DWNGEGTLLATGSCDGQARIWT-LNGELISTLSKHKGPIFSLKWNKKGDYLLTGSVDRTA 389
Query: 379 KLWDARYGDMVHTFE-HEHIVKSVNFNADDTLLVTASNEKLIRVFDLNKLEAGPIEKING 555
+WD + + FE H V++ ++ T+S + +I + + E P + G
Sbjct: 390 VVWDVKAEEWKQQFEFHSGPTLDVDWR-NNVSFATSSTDSMIYLCKIG--ETRPAKTFTG 446
Query: 556 HTSSIRHAVF-LNNSRIVSVSDDNTMRVWD 642
H + + S + S SDD+T ++W+
Sbjct: 447 HQGEVNCVKWDPTGSLLASCSDDSTAKIWN 476
Score = 45.2 bits (102), Expect = 6e-05
Identities = 39/138 (28%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Frame = +1
Query: 289 TFEGHKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHTF-EHEHIVKSVNF---- 453
TF GH+G V V +L AS + D TAK+W+ + VH EH + ++ +
Sbjct: 443 TFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRWSPTG 502
Query: 454 ----NADDTL-LVTASNEKLIRVFDLNKLEAGP-IEKINGHTSSIRHAVFL-NNSRIVSV 612
N + L L +AS + ++++D E G + NGH + F N I S
Sbjct: 503 PGTNNPNKQLTLASASFDSTVKLWD---AELGKMLCSFNGHREPVYSLAFSPNGEYIASG 559
Query: 613 SDDNTMRVWDRNSGEEVQ 666
S D ++ +W G+ V+
Sbjct: 560 SLDKSIHIWSIKEGKIVK 577
Score = 45.2 bits (102), Expect = 6e-05
Identities = 25/97 (25%), Positives = 43/97 (44%)
Frame = +1
Query: 223 LISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALTQNANLAASGAADFTAKLWDARYG 402
L SA D L E G + +F GH+ V+ +A + N ASG+ D + +W + G
Sbjct: 514 LASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKEG 573
Query: 403 DMVHTFEHEHIVKSVNFNADDTLLVTASNEKLIRVFD 513
+V T+ + V +N + + + + V D
Sbjct: 574 KIVKTYTGNGGIFEVCWNKEGNKIAACFADNSVCVLD 610
>At2g01330.1 68415.m00050 transducin family protein / WD-40 repeat
family protein contains 10 WD-40 repeats (PF00400);
similar to 66kDa stress protein (SWISS-PROT: P90587)[
Physarum polycephalum (Slime mold)]
Length = 474
Score = 51.2 bits (117), Expect = 9e-07
Identities = 41/163 (25%), Positives = 76/163 (46%), Gaps = 15/163 (9%)
Frame = +1
Query: 211 DGYYLISACKDGKPMLRQGETGDWIGTF---EGHKGAVWGVALTQNANLAASGAADFTAK 381
DG I+ D K M+ G+TGD +G +GHKG+++ V+ + ++ + +AD +AK
Sbjct: 62 DGTKFITVSSDKKGMIYDGKTGDKVGELASEDGHKGSIYAVSWSPDSKRVLTVSADKSAK 121
Query: 382 LW----DARYGDMVHTFEH------EHIVKSVNFNADDTLLVTASNEKLIRVFDLNKLEA 531
+W D G ++ T E ++ + D L+T S + +F + ++
Sbjct: 122 VWEVAEDGTIGSVIKTLSFMESGGAEDMLVGCLWQNDH--LITVSLGGTMSLFSADDMDK 179
Query: 532 GPIEKINGHTSSIRHAVFL--NNSRIVSVSDDNTMRVWDRNSG 654
P+ ++GH ++ L N I+S S D + W + G
Sbjct: 180 PPL-LLSGHIKNVTSLAVLGENQKTILSCSYDGLIVKWLKGVG 221
Score = 50.4 bits (115), Expect = 1e-06
Identities = 32/153 (20%), Positives = 73/153 (47%), Gaps = 5/153 (3%)
Frame = +1
Query: 196 SDVTKDGYYLISACKDGKPMLRQGETGDWI---GTFEGHKGAVWGVALTQNANLAASGAA 366
S ++ DG I +DGK + + + E H+GA+ + + + + ASG A
Sbjct: 317 SVISPDGKEAIVGGQDGKLHIYSVSGDNNLKEEAVLEKHRGALTVIRYSPDLTMFASGDA 376
Query: 367 DFTAKLWD--ARYGDMVHTFEHEHIVKSVNFNADDTLLVTASNEKLIRVFDLNKLEAGPI 540
+ A +WD + + + H + S+ ++ ++ ++ T S + + V++++K + I
Sbjct: 377 NREAVVWDRETKQVKLNNMLFHTARINSLAWSPNNKMVATGSIDTCVIVYEVDKPASSRI 436
Query: 541 EKINGHTSSIRHAVFLNNSRIVSVSDDNTMRVW 639
N H + F+++ + S +D ++R+W
Sbjct: 437 TARNAHLGGVNAVAFIDDCTVASSGEDASVRLW 469
Score = 48.8 bits (111), Expect = 5e-06
Identities = 44/180 (24%), Positives = 82/180 (45%), Gaps = 14/180 (7%)
Frame = +1
Query: 283 IGTFEGHKGAVWGVAL--TQNANLAASGAADFTAKLWDARYGDMVHTF-EHEHIVKSVNF 453
+G F+GH V A T+ +A G DF +D + EH + V + +
Sbjct: 1 MGDFDGHSRRVLSCAFKPTRPFRIATCGE-DFLVNFYDGPPFKFHSSHREHSNFVNCIRY 59
Query: 454 NADDTLLVTASNEKLIRVFD-LNKLEAGPIEKINGHTSSIRHAVFLNNS-RIVSVSDDNT 627
+ D T +T S++K ++D + G + +GH SI + +S R+++VS D +
Sbjct: 60 SPDGTKFITVSSDKKGMIYDGKTGDKVGELASEDGHKGSIYAVSWSPDSKRVLTVSADKS 119
Query: 628 MRVW----DRNSGEEVQKVEFQSVPNSL-----XLSRDGAILTVAHGTNVSFYTSDTMRK 780
+VW D G ++ + F + L ++ ++TV+ G +S +++D M K
Sbjct: 120 AKVWEVAEDGTIGSVIKTLSFMESGGAEDMLVGCLWQNDHLITVSLGGTMSLFSADDMDK 179
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 50.4 bits (115), Expect = 1e-06
Identities = 40/168 (23%), Positives = 77/168 (45%), Gaps = 5/168 (2%)
Frame = +1
Query: 301 HKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHT-FEHEHIVKSVNFNADDTLLV 477
H+G + N+ +G D K+WD G ++ + + + + D+ ++
Sbjct: 230 HEGGCGSIVFEYNSGTLFTGGQDRAVKMWDTNSGTLIKSLYGSLGNILDMAVTHDNKSVI 289
Query: 478 TASNEKLIRVFDLNKLEAGPI-EKINGHTSSIRHA-VFLNNSR-IVSVSDDNTMRVWDRN 648
A++ + V+D++ +G + + GHT + V +SR +VS + D T+++WD +
Sbjct: 290 AATSSNNLFVWDVS---SGRVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLH 346
Query: 649 SGEEVQKVEFQSVPNSLXLSRDGAILTVAH-GTNVSFYTSDTMRKLRE 789
G V F S N++ LS DG + H N+ + T + L E
Sbjct: 347 KGYCTNTVLFTSNCNAICLSIDGLTVFSGHMDGNLRLWDIQTGKLLSE 394
Score = 41.1 bits (92), Expect = 0.001
Identities = 36/163 (22%), Positives = 75/163 (46%), Gaps = 3/163 (1%)
Frame = +1
Query: 271 TGDWIGTFEGHKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHTFE-HEHIVKSV 447
+G I + G G + +A+T + + + +WD G + HT H V +V
Sbjct: 262 SGTLIKSLYGSLGNILDMAVTHDNKSVIAATSSNNLFVWDVSSGRVRHTLTGHTDKVCAV 321
Query: 448 NFNA-DDTLLVTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVFLNNSRIVSVSDDN 624
+ + +V+A+ ++ I+++DL+K + ++I + ++ + S D
Sbjct: 322 DVSKFSSRHVVSAAYDRTIKLWDLHKGYCTNTVLFTSNCNAI--CLSIDGLTVFSGHMDG 379
Query: 625 TMRVWDRNSGEEVQKVE-FQSVPNSLXLSRDGAILTVAHGTNV 750
+R+WD +G+ + +V S S+ LSR+G + + NV
Sbjct: 380 NLRLWDIQTGKLLSEVAGHSSAVTSVSLSRNGNRILTSGRDNV 422
Score = 36.3 bits (80), Expect = 0.026
Identities = 27/109 (24%), Positives = 46/109 (42%), Gaps = 5/109 (4%)
Frame = +1
Query: 211 DGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALTQNANLAASGAADFTAKLWD 390
DG + S DG L +TG + GH AV V+L++N N + D ++D
Sbjct: 368 DGLTVFSGHMDGNLRLWDIQTGKLLSEVAGHSSAVTSVSLSRNGNRILTSGRDNVHNVFD 427
Query: 391 ARYGDMVHTFEHEHIVKSVNF-----NADDTLLVTASNEKLIRVFDLNK 522
R ++ T + N+ + DD + S + + V+ L+K
Sbjct: 428 TRTLEICGTLRASGNRLASNWSRSCISPDDDYVAAGSADGSVHVWSLSK 476
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 50.4 bits (115), Expect = 1e-06
Identities = 40/132 (30%), Positives = 61/132 (46%), Gaps = 8/132 (6%)
Frame = +1
Query: 286 GTFE-GHKGAVWGVALT-QNANLAASGAADFTAKLWDARYGD-MVHTFE-HEHIVKSVNF 453
G F+ GH V V+++ N N SG+ D TA+LWD R V TF HE V +V F
Sbjct: 197 GEFQSGHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKF 256
Query: 454 NADDTLLVTASNEKLIRVFDLNKLEAGPIEKI--NGHTSSIRHAVFLNNSRIV--SVSDD 621
D T S++ R++D+ + + +G + F + R++ + +
Sbjct: 257 FPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIAFSVSGRLLFAGYASN 316
Query: 622 NTMRVWDRNSGE 657
NT VWD GE
Sbjct: 317 NTCYVWDTLLGE 328
Score = 35.5 bits (78), Expect = 0.046
Identities = 32/142 (22%), Positives = 59/142 (41%), Gaps = 10/142 (7%)
Frame = +1
Query: 289 TFEGHKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHTFEHEHI-VKSVNFNADD 465
T +GH G V+ + T N S + D +W+A H + V + F+ +
Sbjct: 60 TLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNG 119
Query: 466 TLLVTASNEKLIRVFDL----NKLEAGPIEK-INGHTSSIRHAVFLNN--SRIVSVSDDN 624
+ + + +F L +K P+ + + GH + ++ N + +++ S D
Sbjct: 120 QSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQ 179
Query: 625 TMRVWDRNSG--EEVQKVEFQS 684
T +WD +G V EFQS
Sbjct: 180 TCILWDVTTGLKTSVFGGEFQS 201
Score = 35.1 bits (77), Expect = 0.060
Identities = 20/87 (22%), Positives = 38/87 (43%)
Frame = +1
Query: 163 GHTRPVVHLDFSDVTKDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALTQNA 342
GHT V+ + S + +++ +C + + TF GH+G V V +
Sbjct: 202 GHTADVLSVSISG-SNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDG 260
Query: 343 NLAASGAADFTAKLWDARYGDMVHTFE 423
+G+ D T +L+D R G + ++
Sbjct: 261 YRFGTGSDDGTCRLYDIRTGHQLQVYQ 287
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 50.4 bits (115), Expect = 1e-06
Identities = 34/150 (22%), Positives = 71/150 (47%), Gaps = 4/150 (2%)
Frame = +1
Query: 202 VTKDGYYLISACKDGKPMLRQ--GETGDWIGTFEGHKGAVWGVALTQNANLAASGAADFT 375
VT DG + +DGK L G++ E H+GA+ + + + ++ AS +
Sbjct: 455 VTPDGTEAVIGGQDGKLHLYSINGDSLTEEAVLERHRGAISVIRYSPDLSMFASADLNRE 514
Query: 376 AKLWD--ARYGDMVHTFEHEHIVKSVNFNADDTLLVTASNEKLIRVFDLNKLEAGPIEKI 549
A +WD +R + + H + + ++ + T++ T S + + V++++K + +
Sbjct: 515 AVVWDRVSREMKLKNMLYHSARINCLAWSPNSTMVATGSLDTCVIVYEVDKPASSRMTIK 574
Query: 550 NGHTSSIRHAVFLNNSRIVSVSDDNTMRVW 639
H + F ++S +VS +D +RVW
Sbjct: 575 GAHLGGVYGLGFADDSHVVSSGEDACIRVW 604
Score = 48.8 bits (111), Expect = 5e-06
Identities = 40/153 (26%), Positives = 74/153 (48%), Gaps = 9/153 (5%)
Frame = +1
Query: 211 DGYYLI-SACKDGKPMLR--QGETGDWIGTFEGHKGAVWGVAL--TQNANLAASGAADFT 375
DG ++ S GK ++R ++G +G F+GH V A+ T+ + G DF
Sbjct: 110 DGMRIVASGDGKGKSLVRAFMWDSGSNVGEFDGHSRRVLSCAIKPTRPFRIVTCGE-DFL 168
Query: 376 AKLWDAR-YGDMVHTFEHEHIVKSVNFNADDTLLVTASNEKLIRVFDLNKLE-AGPIEKI 549
++ + + + EH + V V F D + +T S++K ++D E G +
Sbjct: 169 VNFYEGPPFKFKLSSREHSNFVNCVRFAPDGSKFITVSSDKKGIIYDGKTCEILGELSSD 228
Query: 550 NGHTSSIRHAVFL--NNSRIVSVSDDNTMRVWD 642
+GH SI +AV + ++++VS D + ++WD
Sbjct: 229 DGHKGSI-YAVSWSPDGKQVLTVSADKSAKIWD 260
>At3g18860.2 68416.m02396 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 50.0 bits (114), Expect = 2e-06
Identities = 49/215 (22%), Positives = 101/215 (46%), Gaps = 4/215 (1%)
Frame = +1
Query: 163 GHTR---PVVHLDFSDVTKDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALT 333
GHT P+ + +D +G L+S D + G+ I T +GH+ V GVA+
Sbjct: 64 GHTSFVGPLAWIPPTDEYPEGR-LVSGSMDTFVFVWNLMNGENIQTLKGHQMQVTGVAI- 121
Query: 334 QNANLAASGAADFTAKLWDARYGDMVHTFE-HEHIVKSVNFNADDTLLVTASNEKLIRVF 510
N ++ +S + D T K W R G +V +++ H+ +++V LV+ S++ ++++
Sbjct: 122 DNEDIVSS-SVDQTLKRW--RNGQLVESWDAHQSPIQAV-IRLPSGELVSGSSDASLKLW 177
Query: 511 DLNKLEAGPIEKINGHTSSIRHAVFLNNSRIVSVSDDNTMRVWDRNSGEEVQKVEFQSVP 690
K ++ ++GHT ++R + + +S S D ++R+W + ++ V S+
Sbjct: 178 K-GKTS---LQTLSGHTDTVRGLAVMPDLGFLSASHDGSIRLWALSGEVLLEMVGHTSLV 233
Query: 691 NSLXLSRDGAILTVAHGTNVSFYTSDTMRKLREFP 795
S+ G I++ + + + + E P
Sbjct: 234 YSVDAHSSGLIVSASEDRHAKIWKDGVCVQSLEHP 268
Score = 29.9 bits (64), Expect = 2.3
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +1
Query: 544 KINGHTSSIRHAVFLNNSRIVSVSDDNTMRVWDRNSGEE 660
+++GH +R N+ I + S D T+RVW + ++
Sbjct: 15 ELHGHDDDVRGICVCNDENIATSSRDRTIRVWSLDPSDK 53
>At3g18860.1 68416.m02395 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 50.0 bits (114), Expect = 2e-06
Identities = 49/215 (22%), Positives = 101/215 (46%), Gaps = 4/215 (1%)
Frame = +1
Query: 163 GHTR---PVVHLDFSDVTKDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALT 333
GHT P+ + +D +G L+S D + G+ I T +GH+ V GVA+
Sbjct: 64 GHTSFVGPLAWIPPTDEYPEGR-LVSGSMDTFVFVWNLMNGENIQTLKGHQMQVTGVAI- 121
Query: 334 QNANLAASGAADFTAKLWDARYGDMVHTFE-HEHIVKSVNFNADDTLLVTASNEKLIRVF 510
N ++ +S + D T K W R G +V +++ H+ +++V LV+ S++ ++++
Sbjct: 122 DNEDIVSS-SVDQTLKRW--RNGQLVESWDAHQSPIQAV-IRLPSGELVSGSSDASLKLW 177
Query: 511 DLNKLEAGPIEKINGHTSSIRHAVFLNNSRIVSVSDDNTMRVWDRNSGEEVQKVEFQSVP 690
K ++ ++GHT ++R + + +S S D ++R+W + ++ V S+
Sbjct: 178 K-GKTS---LQTLSGHTDTVRGLAVMPDLGFLSASHDGSIRLWALSGEVLLEMVGHTSLV 233
Query: 691 NSLXLSRDGAILTVAHGTNVSFYTSDTMRKLREFP 795
S+ G I++ + + + + E P
Sbjct: 234 YSVDAHSSGLIVSASEDRHAKIWKDGVCVQSLEHP 268
Score = 29.9 bits (64), Expect = 2.3
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +1
Query: 544 KINGHTSSIRHAVFLNNSRIVSVSDDNTMRVWDRNSGEE 660
+++GH +R N+ I + S D T+RVW + ++
Sbjct: 15 ELHGHDDDVRGICVCNDENIATSSRDRTIRVWSLDPSDK 53
>At1g20540.1 68414.m02559 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Rbap46 polypeptide (GI:9454362) [Gallus
gallus]
Length = 351
Score = 49.6 bits (113), Expect = 3e-06
Identities = 32/101 (31%), Positives = 55/101 (54%), Gaps = 4/101 (3%)
Frame = +1
Query: 349 AASGAADFTAKLWDARYGDMVHTFEHEHIVKSVNFNAD-DTLLVTASNEKLIRVFDLNKL 525
A + + + + WD R V++ EH H V+ V++N + +LVTA +E I V+DL K
Sbjct: 183 AVAATGESSVQFWDLRTMKKVNSIEHAH-VRGVDYNPKREHILVTAEDESGIHVWDLRKA 241
Query: 526 EAGPIEKINGHTSSIRHAVFLN---NSRIVSVSDDNTMRVW 639
+ P++++ GHT AV N + I+S D+ + +W
Sbjct: 242 KV-PVQELPGHT-HWTWAVRCNPEYDGLILSAGTDSVVNLW 280
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 48.8 bits (111), Expect = 5e-06
Identities = 35/152 (23%), Positives = 67/152 (44%), Gaps = 1/152 (0%)
Frame = +1
Query: 202 VTKDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALTQNANLAASGAADFTAK 381
++ D ++S D ++ +T + +GH V V + + + A D T K
Sbjct: 905 ISSDRGKIVSGSDDLSVIVWDKQTTQLLEELKGHDSQVSCVKMLSGERVLTA-AHDGTVK 963
Query: 382 LWDARYGDMVHTFEH-EHIVKSVNFNADDTLLVTASNEKLIRVFDLNKLEAGPIEKINGH 558
+WD R V T + S+ ++ +L A + + ++D+ + K+ GH
Sbjct: 964 MWDVRTDMCVATVGRCSSAILSLEYDDSTGILAAAGRDTVANIWDIRS--GKQMHKLKGH 1021
Query: 559 TSSIRHAVFLNNSRIVSVSDDNTMRVWDRNSG 654
T IR ++ + +++ SDD T RVW + G
Sbjct: 1022 TKWIR-SIRMVEDTLITGSDDWTARVWSVSRG 1052
Score = 45.6 bits (103), Expect = 4e-05
Identities = 26/106 (24%), Positives = 57/106 (53%), Gaps = 3/106 (2%)
Frame = +1
Query: 334 QNANLAASGAADFTAKLWDA--RYGDMVHTFE-HEHIVKSVNFNADDTLLVTASNEKLIR 504
++A SG+ D K+WD R ++ T + H V++++ +D +V+ S++ +
Sbjct: 865 EDAGFFISGSTDCLVKIWDPSLRGSELRATLKGHTGTVRAIS--SDRGKIVSGSDDLSVI 922
Query: 505 VFDLNKLEAGPIEKINGHTSSIRHAVFLNNSRIVSVSDDNTMRVWD 642
V+D + +E++ GH S + L+ R+++ + D T+++WD
Sbjct: 923 VWDKQTTQL--LEELKGHDSQVSCVKMLSGERVLTAAHDGTVKMWD 966
Score = 44.8 bits (101), Expect = 7e-05
Identities = 26/118 (22%), Positives = 59/118 (50%), Gaps = 1/118 (0%)
Frame = +1
Query: 409 VHTFEHEHIVKSVNFNADDTLLVTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVFL 588
+H+ + V D ++ S + L++++D + + + GHT ++R A+
Sbjct: 849 LHSVTRREVCDLVGDREDAGFFISGSTDCLVKIWDPSLRGSELRATLKGHTGTVR-AISS 907
Query: 589 NNSRIVSVSDDNTMRVWDRNSGEEVQKVE-FQSVPNSLXLSRDGAILTVAHGTNVSFY 759
+ +IVS SDD ++ VWD+ + + +++++ S + + + +LT AH V +
Sbjct: 908 DRGKIVSGSDDLSVIVWDKQTTQLLEELKGHDSQVSCVKMLSGERVLTAAHDGTVKMW 965
>At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400); G
protein beta subunit-like protein, Schistosoma mansoni,
gb:U30261
Length = 321
Score = 48.0 bits (109), Expect = 8e-06
Identities = 32/98 (32%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
Frame = +1
Query: 163 GHTRPVVHLDFSDVTKDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALTQNA 342
GH PV L FS V D L S DG + E +G+ GH V V + +
Sbjct: 198 GHNMPVRSLVFSPV--DPRVLFSGSDDGHVNMHDAEGKTLLGSMSGHTSWVLSVDASPDG 255
Query: 343 NLAASGAADFTAKLWDARYGDMVHTF-EHEHIVKSVNF 453
A+G++D T +LWD + + T H V SV F
Sbjct: 256 GAIATGSSDRTVRLWDLKMRAAIQTMSNHNDQVWSVAF 293
Score = 38.7 bits (86), Expect = 0.005
Identities = 35/153 (22%), Positives = 68/153 (44%), Gaps = 9/153 (5%)
Frame = +1
Query: 211 DGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALTQ-NANLAASGAADFTAKLW 387
+G L DG + + + EGH V + + + + SG+ D +
Sbjct: 169 NGKRLACGSMDGTICVFDVDRSKLLHQLEGHNMPVRSLVFSPVDPRVLFSGSDDGHVNMH 228
Query: 388 DARYGDMVHTFE-HEHIVKSVNFNADDTLLVTASNEKLIRVFDLNKLEAGPIEKINGHTS 564
DA ++ + H V SV+ + D + T S+++ +R++DL K+ A I+ ++ H
Sbjct: 229 DAEGKTLLGSMSGHTSWVLSVDASPDGGAIATGSSDRTVRLWDL-KMRAA-IQTMSNHND 286
Query: 565 SIRHAVF-------LNNSRIVSVSDDNTMRVWD 642
+ F + R+ SVSDD ++ ++D
Sbjct: 287 QVWSVAFRPPGGTGVRAGRLASVSDDKSVSLYD 319
Score = 32.7 bits (71), Expect = 0.32
Identities = 28/117 (23%), Positives = 51/117 (43%), Gaps = 3/117 (2%)
Frame = +1
Query: 310 AVWGVALTQNANLAASGAADFTAKLWDARYGDMVHT-FEHEHIVKSVNFNADDTLLVTAS 486
A W A L +G+ D T KLW D+V T H V ++ + + ++S
Sbjct: 20 ATWVPATEDRPALLLTGSLDETVKLWRPDELDLVRTNTGHSLGVAALAAHPSGIIAASSS 79
Query: 487 NEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVFLNNSRIVSVSDDN--TMRVWDRNS 651
+ +RVFD++ I + S + F I++V+ + ++++WD S
Sbjct: 80 IDSFVRVFDVD--TNATIAVLEAPPSEVWGMQFEPKGTILAVAGGSSASVKLWDTAS 134
>At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); phytochrome
A supressor spa1 (GI:4809171) [Arabidopsis thaliana]
Length = 837
Score = 47.6 bits (108), Expect = 1e-05
Identities = 44/175 (25%), Positives = 81/175 (46%), Gaps = 4/175 (2%)
Frame = +1
Query: 301 HKGAVWGVALTQ-NANLAASGAADFTAKLWDARYGDMVHTFEHEHIVKSVNFNADD-TLL 474
HK VW + ++ + L ASG+ D T G + T + + V V F +D L
Sbjct: 625 HKKRVWSIDISSADPTLLASGSDDGT--------GVSIGTIKTKANVCCVQFPSDSGRSL 676
Query: 475 VTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVFLNNSRIVSVSDDNTMRVWDRN-S 651
S + + +DL + P+ + GH+ ++ + F+++S +VS S DNT+++WD + S
Sbjct: 677 AFGSADHKVYYYDLRNPKI-PLCTMIGHSKTVSYVKFVDSSTLVSSSTDNTLKLWDLSMS 735
Query: 652 GEEVQKVEFQSVPNSLXLSRDGAILTVAHG-TNVSFYTSDTMRKLREFPVPTKCY 813
+ + S L ++ L+V+ G T++ + FP+P Y
Sbjct: 736 ASGINESPLHSFTGHTNL-KNFVGLSVSDGYIATGSETNEVFVYHKAFPMPVMSY 789
>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 860
Score = 47.6 bits (108), Expect = 1e-05
Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 2/105 (1%)
Frame = +1
Query: 214 GYYLISAC-KDGKPMLRQGETGDWIGTFEGHKGAVWGVALTQNANLAASGAADFTAKLWD 390
G +L C K G+ ++ T +I +GH V V + ++ L A+GA D K+W+
Sbjct: 318 GNWLTFGCAKLGQLLVWDWRTETYILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWN 377
Query: 391 ARYGDMVHTF-EHEHIVKSVNFNADDTLLVTASNEKLIRVFDLNK 522
G TF EH + V +++F AD+ L++AS + +R +D +
Sbjct: 378 VMSGTCFITFTEHTNAVTALHFMADNHSLLSASLDGTVRAWDFKR 422
Score = 45.6 bits (103), Expect = 4e-05
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = +1
Query: 268 ETGDWIGTFEGHKGAVWGVALTQNANLAASGAADFTAKLWDA-RYGDMVHTFEHEHIVKS 444
+TG GH+ V G+ + L AS + D+T +LWD V TF H H V +
Sbjct: 465 KTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFRHNHDVLT 524
Query: 445 VNFNADDTLLVTASNEKLIRVFD 513
V F D L +++ + I +D
Sbjct: 525 VAFRPDGKQLASSTLDGQINFWD 547
Score = 28.3 bits (60), Expect = 6.9
Identities = 25/111 (22%), Positives = 47/111 (42%), Gaps = 4/111 (3%)
Frame = +1
Query: 538 IEKINGHTSSIRHAVFLNNSRIVSV-SDDNTMRVWDRNSGE-EVQKVEFQSVPNSLXLSR 711
I K GH + + +S++++ +DDN ++VW+ SG + E + +L
Sbjct: 342 ILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMA 401
Query: 712 DG-AILTVAHGTNVSFYTSDTMRKLREFPVPTKCYSASL-APXRATFVCGG 858
D ++L+ + V + + + + PT SL A VC G
Sbjct: 402 DNHSLLSASLDGTVRAWDFKRYKNYKTYTTPTPRQFVSLTADPSGDVVCAG 452
>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 900
Score = 47.6 bits (108), Expect = 1e-05
Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 2/105 (1%)
Frame = +1
Query: 214 GYYLISAC-KDGKPMLRQGETGDWIGTFEGHKGAVWGVALTQNANLAASGAADFTAKLWD 390
G +L C K G+ ++ T +I +GH V V + ++ L A+GA D K+W+
Sbjct: 358 GNWLTFGCAKLGQLLVWDWRTETYILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWN 417
Query: 391 ARYGDMVHTF-EHEHIVKSVNFNADDTLLVTASNEKLIRVFDLNK 522
G TF EH + V +++F AD+ L++AS + +R +D +
Sbjct: 418 VMSGTCFITFTEHTNAVTALHFMADNHSLLSASLDGTVRAWDFKR 462
Score = 45.6 bits (103), Expect = 4e-05
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = +1
Query: 268 ETGDWIGTFEGHKGAVWGVALTQNANLAASGAADFTAKLWDA-RYGDMVHTFEHEHIVKS 444
+TG GH+ V G+ + L AS + D+T +LWD V TF H H V +
Sbjct: 505 KTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFRHNHDVLT 564
Query: 445 VNFNADDTLLVTASNEKLIRVFD 513
V F D L +++ + I +D
Sbjct: 565 VAFRPDGKQLASSTLDGQINFWD 587
Score = 28.3 bits (60), Expect = 6.9
Identities = 25/111 (22%), Positives = 47/111 (42%), Gaps = 4/111 (3%)
Frame = +1
Query: 538 IEKINGHTSSIRHAVFLNNSRIVSV-SDDNTMRVWDRNSGE-EVQKVEFQSVPNSLXLSR 711
I K GH + + +S++++ +DDN ++VW+ SG + E + +L
Sbjct: 382 ILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMA 441
Query: 712 DG-AILTVAHGTNVSFYTSDTMRKLREFPVPTKCYSASL-APXRATFVCGG 858
D ++L+ + V + + + + PT SL A VC G
Sbjct: 442 DNHSLLSASLDGTVRAWDFKRYKNYKTYTTPTPRQFVSLTADPSGDVVCAG 492
>At5g43930.1 68418.m05374 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat protein 5 (SP:Q9UGP9) [Homo
sapiens]
Length = 726
Score = 47.2 bits (107), Expect = 1e-05
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 1/97 (1%)
Frame = +1
Query: 211 DGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVAL-TQNANLAASGAADFTAKLW 387
DG L S D + ETG+ + GH+ W V ++ + ASG+ D +LW
Sbjct: 117 DGRTLASTHGDHTVKIIDCETGNCLKVLTGHRRTPWVVRFHPHHSEIVASGSLDLEVRLW 176
Query: 388 DARYGDMVHTFEHEHIVKSVNFNADDTLLVTASNEKL 498
+ + + + + S+ F+A+ LL AS KL
Sbjct: 177 NTTTSECIRSHLFYRPIASIAFHAEGELLAVASGHKL 213
>At5g10940.1 68418.m01269 transducin family protein / WD-40 repeat
family protein unnamed ORF cDNA FLJ10872, Homo sapiens,
EMBL:AK001734; contains Pfam PF00400: WD domain, G-beta
repeat (6 copies,1 weak)
Length = 757
Score = 46.0 bits (104), Expect = 3e-05
Identities = 30/133 (22%), Positives = 61/133 (45%), Gaps = 4/133 (3%)
Frame = +1
Query: 295 EGHKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHTFEHEHI--VKSVNF--NAD 462
EGH+G V +A N +L SG+ D +W+ ++H+ + H + F
Sbjct: 47 EGHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTKFVPETS 106
Query: 463 DTLLVTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVFLNNSRIVSVSDDNTMRVWD 642
D L+V+ + + +R+F+ ++L +G E N S + + ++V N VW
Sbjct: 107 DELVVSGAGDAEVRLFNTSRL-SGRAEDDNAIIPSALYQCHTRRVKKLAVEPGNPNVVWS 165
Query: 643 RNSGEEVQKVEFQ 681
+ +++ +F+
Sbjct: 166 ASEDGTLRQHDFR 178
>At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 785
Score = 45.6 bits (103), Expect = 4e-05
Identities = 39/155 (25%), Positives = 65/155 (41%), Gaps = 3/155 (1%)
Frame = +1
Query: 325 ALTQNANLAASGAADFTAKLWDARYGDMVHT-FEHEHIVKSVNFNADDTLLVTASNEKLI 501
+ + + L AS D +W+ + T EH HI+ V F + T L T+S +K I
Sbjct: 515 SFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTI 574
Query: 502 RVFDLNKLEAGPIEKINGHTSSIRHAVF--LNNSRIVSVSDDNTMRVWDRNSGEEVQKVE 675
+++D + + I+GH + + F + S +N +R WD N+ V+ V+
Sbjct: 575 KIWDASD-PGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINA-SCVRAVK 632
Query: 676 FQSVPNSLXLSRDGAILTVAHGTNVSFYTSDTMRK 780
S R G L A VS + + K
Sbjct: 633 GASTQVRFQ-PRTGQFLAAASENTVSIFDIENNNK 666
Score = 35.5 bits (78), Expect = 0.046
Identities = 24/136 (17%), Positives = 56/136 (41%), Gaps = 1/136 (0%)
Frame = +1
Query: 268 ETGDWIGTFEGHKGAVWGVAL-TQNANLAASGAADFTAKLWDARYGDMVHTFEHEHIVKS 444
+ G ++ T GH V + + L S ++ + WD V +
Sbjct: 581 DPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDIN-ASCVRAVKGAST--Q 637
Query: 445 VNFNADDTLLVTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVFLNNSRIVSVSDDN 624
V F + A++E + +FD+ + GH+S++ + N +V+ ++
Sbjct: 638 VRFQPRTGQFLAAASENTVSIFDIENNNKR-VNIFKGHSSNVHSVCWSPNGELVASVSED 696
Query: 625 TMRVWDRNSGEEVQKV 672
+++W +SG+ + ++
Sbjct: 697 AVKLWSLSSGDCIHEL 712
>At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 45.6 bits (103), Expect = 4e-05
Identities = 39/155 (25%), Positives = 65/155 (41%), Gaps = 3/155 (1%)
Frame = +1
Query: 325 ALTQNANLAASGAADFTAKLWDARYGDMVHT-FEHEHIVKSVNFNADDTLLVTASNEKLI 501
+ + + L AS D +W+ + T EH HI+ V F + T L T+S +K I
Sbjct: 517 SFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTI 576
Query: 502 RVFDLNKLEAGPIEKINGHTSSIRHAVF--LNNSRIVSVSDDNTMRVWDRNSGEEVQKVE 675
+++D + + I+GH + + F + S +N +R WD N+ V+ V+
Sbjct: 577 KIWDASD-PGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINA-SCVRAVK 634
Query: 676 FQSVPNSLXLSRDGAILTVAHGTNVSFYTSDTMRK 780
S R G L A VS + + K
Sbjct: 635 GASTQVRFQ-PRTGQFLAAASENTVSIFDIENNNK 668
Score = 35.5 bits (78), Expect = 0.046
Identities = 24/136 (17%), Positives = 56/136 (41%), Gaps = 1/136 (0%)
Frame = +1
Query: 268 ETGDWIGTFEGHKGAVWGVAL-TQNANLAASGAADFTAKLWDARYGDMVHTFEHEHIVKS 444
+ G ++ T GH V + + L S ++ + WD V +
Sbjct: 583 DPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDIN-ASCVRAVKGAST--Q 639
Query: 445 VNFNADDTLLVTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVFLNNSRIVSVSDDN 624
V F + A++E + +FD+ + GH+S++ + N +V+ ++
Sbjct: 640 VRFQPRTGQFLAAASENTVSIFDIENNNKR-VNIFKGHSSNVHSVCWSPNGELVASVSED 698
Query: 625 TMRVWDRNSGEEVQKV 672
+++W +SG+ + ++
Sbjct: 699 AVKLWSLSSGDCIHEL 714
>At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 45.6 bits (103), Expect = 4e-05
Identities = 39/155 (25%), Positives = 65/155 (41%), Gaps = 3/155 (1%)
Frame = +1
Query: 325 ALTQNANLAASGAADFTAKLWDARYGDMVHT-FEHEHIVKSVNFNADDTLLVTASNEKLI 501
+ + + L AS D +W+ + T EH HI+ V F + T L T+S +K I
Sbjct: 517 SFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTI 576
Query: 502 RVFDLNKLEAGPIEKINGHTSSIRHAVF--LNNSRIVSVSDDNTMRVWDRNSGEEVQKVE 675
+++D + + I+GH + + F + S +N +R WD N+ V+ V+
Sbjct: 577 KIWDASD-PGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINA-SCVRAVK 634
Query: 676 FQSVPNSLXLSRDGAILTVAHGTNVSFYTSDTMRK 780
S R G L A VS + + K
Sbjct: 635 GASTQVRFQ-PRTGQFLAAASENTVSIFDIENNNK 668
Score = 35.5 bits (78), Expect = 0.046
Identities = 24/136 (17%), Positives = 56/136 (41%), Gaps = 1/136 (0%)
Frame = +1
Query: 268 ETGDWIGTFEGHKGAVWGVAL-TQNANLAASGAADFTAKLWDARYGDMVHTFEHEHIVKS 444
+ G ++ T GH V + + L S ++ + WD V +
Sbjct: 583 DPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDIN-ASCVRAVKGAST--Q 639
Query: 445 VNFNADDTLLVTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVFLNNSRIVSVSDDN 624
V F + A++E + +FD+ + GH+S++ + N +V+ ++
Sbjct: 640 VRFQPRTGQFLAAASENTVSIFDIENNNKR-VNIFKGHSSNVHSVCWSPNGELVASVSED 698
Query: 625 TMRVWDRNSGEEVQKV 672
+++W +SG+ + ++
Sbjct: 699 AVKLWSLSSGDCIHEL 714
>At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 45.6 bits (103), Expect = 4e-05
Identities = 39/155 (25%), Positives = 65/155 (41%), Gaps = 3/155 (1%)
Frame = +1
Query: 325 ALTQNANLAASGAADFTAKLWDARYGDMVHT-FEHEHIVKSVNFNADDTLLVTASNEKLI 501
+ + + L AS D +W+ + T EH HI+ V F + T L T+S +K I
Sbjct: 517 SFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTI 576
Query: 502 RVFDLNKLEAGPIEKINGHTSSIRHAVF--LNNSRIVSVSDDNTMRVWDRNSGEEVQKVE 675
+++D + + I+GH + + F + S +N +R WD N+ V+ V+
Sbjct: 577 KIWDASD-PGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINA-SCVRAVK 634
Query: 676 FQSVPNSLXLSRDGAILTVAHGTNVSFYTSDTMRK 780
S R G L A VS + + K
Sbjct: 635 GASTQVRFQ-PRTGQFLAAASENTVSIFDIENNNK 668
Score = 35.5 bits (78), Expect = 0.046
Identities = 24/136 (17%), Positives = 56/136 (41%), Gaps = 1/136 (0%)
Frame = +1
Query: 268 ETGDWIGTFEGHKGAVWGVAL-TQNANLAASGAADFTAKLWDARYGDMVHTFEHEHIVKS 444
+ G ++ T GH V + + L S ++ + WD V +
Sbjct: 583 DPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDIN-ASCVRAVKGAST--Q 639
Query: 445 VNFNADDTLLVTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVFLNNSRIVSVSDDN 624
V F + A++E + +FD+ + GH+S++ + N +V+ ++
Sbjct: 640 VRFQPRTGQFLAAASENTVSIFDIENNNKR-VNIFKGHSSNVHSVCWSPNGELVASVSED 698
Query: 625 TMRVWDRNSGEEVQKV 672
+++W +SG+ + ++
Sbjct: 699 AVKLWSLSSGDCIHEL 714
>At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 45.6 bits (103), Expect = 4e-05
Identities = 39/155 (25%), Positives = 65/155 (41%), Gaps = 3/155 (1%)
Frame = +1
Query: 325 ALTQNANLAASGAADFTAKLWDARYGDMVHT-FEHEHIVKSVNFNADDTLLVTASNEKLI 501
+ + + L AS D +W+ + T EH HI+ V F + T L T+S +K I
Sbjct: 517 SFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTI 576
Query: 502 RVFDLNKLEAGPIEKINGHTSSIRHAVF--LNNSRIVSVSDDNTMRVWDRNSGEEVQKVE 675
+++D + + I+GH + + F + S +N +R WD N+ V+ V+
Sbjct: 577 KIWDASD-PGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINA-SCVRAVK 634
Query: 676 FQSVPNSLXLSRDGAILTVAHGTNVSFYTSDTMRK 780
S R G L A VS + + K
Sbjct: 635 GASTQVRFQ-PRTGQFLAAASENTVSIFDIENNNK 668
Score = 35.5 bits (78), Expect = 0.046
Identities = 24/136 (17%), Positives = 56/136 (41%), Gaps = 1/136 (0%)
Frame = +1
Query: 268 ETGDWIGTFEGHKGAVWGVAL-TQNANLAASGAADFTAKLWDARYGDMVHTFEHEHIVKS 444
+ G ++ T GH V + + L S ++ + WD V +
Sbjct: 583 DPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDIN-ASCVRAVKGAST--Q 639
Query: 445 VNFNADDTLLVTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVFLNNSRIVSVSDDN 624
V F + A++E + +FD+ + GH+S++ + N +V+ ++
Sbjct: 640 VRFQPRTGQFLAAASENTVSIFDIENNNKR-VNIFKGHSSNVHSVCWSPNGELVASVSED 698
Query: 625 TMRVWDRNSGEEVQKV 672
+++W +SG+ + ++
Sbjct: 699 AVKLWSLSSGDCIHEL 714
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 45.2 bits (102), Expect = 6e-05
Identities = 39/172 (22%), Positives = 82/172 (47%), Gaps = 7/172 (4%)
Frame = +1
Query: 295 EGHKGAVWGVALTQNANLAASGAADFTAKLWDAR---YGDMVHTF-EHEHIVKSVNFNAD 462
E H VW + + N AS + D TA +W+ + + HT H V ++ ++ D
Sbjct: 271 ESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEISADGHISLKHTLVGHHKPVIAILWSPD 330
Query: 463 DTLLVTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVFLNNSRIVSVSDDNTMRVWD 642
D ++T E++IR +D++ + + + G S I + + I++ D ++ +WD
Sbjct: 331 DRQVLTCGAEEVIRRWDVDSGDCVHMYE-KGGISPISCGWYPDGQGIIAGMTDRSICMWD 389
Query: 643 RNSGE-EVQKVEFQSVPNSLXLSRDGA-ILTVAHGTNVSFYTSD-TMRKLRE 789
+ E E K + + + ++ DG +++V + +S + + T+ +L E
Sbjct: 390 LDGREKECWKGQRTQKVSDIAMTDDGKWLVSVCKDSVISLFDREATVERLIE 441
Score = 44.0 bits (99), Expect = 1e-04
Identities = 48/195 (24%), Positives = 83/195 (42%), Gaps = 6/195 (3%)
Frame = +1
Query: 166 HTRPVVHLDFSDVTKDGYYLISACKDGKPMLRQGETGDWIG---TFEGHKGAVWGVALTQ 336
HT V L FS +G YL S+ KD ++ + I T GH V + +
Sbjct: 273 HTDEVWFLQFSH---NGKYLASSSKDQTAIIWEISADGHISLKHTLVGHHKPVIAILWSP 329
Query: 337 NANLAASGAADFTAKLWDARYGDMVHTFEHEHIVK-SVNFNADDTLLVTASNEKLIRVFD 513
+ + A+ + WD GD VH +E I S + D ++ ++ I ++D
Sbjct: 330 DDRQVLTCGAEEVIRRWDVDSGDCVHMYEKGGISPISCGWYPDGQGIIAGMTDRSICMWD 389
Query: 514 LNKLEAGPIEKING-HTSSIRHAVFLNNSR-IVSVSDDNTMRVWDRNSGEEVQKVEFQSV 687
L+ E E G T + ++ + +VSV D+ + ++DR + E + +E + +
Sbjct: 390 LDGREK---ECWKGQRTQKVSDIAMTDDGKWLVSVCKDSVISLFDREATVE-RLIEEEDM 445
Query: 688 PNSLXLSRDGAILTV 732
S LS D + V
Sbjct: 446 ITSFSLSNDNKYILV 460
Score = 31.5 bits (68), Expect = 0.74
Identities = 28/117 (23%), Positives = 57/117 (48%), Gaps = 5/117 (4%)
Frame = +1
Query: 322 VALTQNANLAASGAADFTAKLWDARYGDMVHTFEHEHIVKSVNFNADDT-LLVTASNEKL 498
+A+T + S D L+D R + E E ++ S + + D+ +LV N++
Sbjct: 409 IAMTDDGKWLVSVCKDSVISLFD-REATVERLIEEEDMITSFSLSNDNKYILVNLLNQE- 466
Query: 499 IRVFDLNKLEAGPIEKINGHTSS--IRHAVF--LNNSRIVSVSDDNTMRVWDRNSGE 657
IR++++ + + + GH S I + F + I S S+D+ + +W R++G+
Sbjct: 467 IRLWNIEG-DPKIVSRYKGHKRSRFIIRSCFGGYKQAFIASGSEDSQVYIWHRSTGK 522
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +1
Query: 220 YLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALT-QNANLAASGAADFTAKLW 387
++ S +D + + TG I GH GAV V+ + N ++ AS + D T ++W
Sbjct: 503 FIASGSEDSQVYIWHRSTGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIW 559
>At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 44.8 bits (101), Expect = 7e-05
Identities = 22/78 (28%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = +1
Query: 292 FEGHKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHTFEHEHIVKSVNFN-ADDT 468
F+GH G + ++ ++ L +S + D T +LW + + TF H + V V FN DD
Sbjct: 318 FKGHIGEILDLSWSEKGYLLSS-SVDETVRLWRVGCDECLRTFTHNNFVTCVAFNPVDDN 376
Query: 469 LLVTASNEKLIRVFDLNK 522
++ S + +R++D+ +
Sbjct: 377 YFISGSIDGKVRIWDVTR 394
>At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 44.8 bits (101), Expect = 7e-05
Identities = 22/78 (28%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = +1
Query: 292 FEGHKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHTFEHEHIVKSVNFN-ADDT 468
F+GH G + ++ ++ L +S + D T +LW + + TF H + V V FN DD
Sbjct: 318 FKGHIGEILDLSWSEKGYLLSS-SVDETVRLWRVGCDECLRTFTHNNFVTCVAFNPVDDN 376
Query: 469 LLVTASNEKLIRVFDLNK 522
++ S + +R++D+ +
Sbjct: 377 YFISGSIDGKVRIWDVTR 394
>At5g23730.1 68418.m02782 transducin family protein / WD-40 repeat
family protein contains similarity to photomorphogenesis
repressor protein; contains Pfam PF00400: WD domain,
G-beta repeat (5 copies)
Length = 243
Score = 44.0 bits (99), Expect = 1e-04
Identities = 32/131 (24%), Positives = 60/131 (45%), Gaps = 10/131 (7%)
Frame = +1
Query: 313 VWGVALTQN---ANLAASGAADFTAKLWDARYG--DMVHTFEHEHIVKS----VNFN-AD 462
VW V T++ + + ASG+ D T ++WD R + V I +S V F+ +
Sbjct: 22 VWSVDYTRHGGASTVGASGSDDGTMQVWDPRCPPEESVGVVRPAGICRSAVCCVEFDPSG 81
Query: 463 DTLLVTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVFLNNSRIVSVSDDNTMRVWD 642
+ ++ V+D+ KL P + GHT ++ + FL+ +V+ D +++W
Sbjct: 82 GPAVAVGCADRKGYVYDIRKL-VDPALTLQGHTKTVSYVRFLDGGTVVTAGTDGCLKLWS 140
Query: 643 RNSGEEVQKVE 675
G ++ E
Sbjct: 141 VEDGRVIRTYE 151
Score = 35.9 bits (79), Expect = 0.035
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Frame = +1
Query: 151 LTCGGHTRPVVHLDFSDVTKDGYYLISACKDGKPMLRQGETGDWIGTFEGH--KGAVWGV 324
LT GHT+ V ++ F D G +++A DG L E G I T+EGH G+
Sbjct: 107 LTLQGHTKTVSYVRFLD----GGTVVTAGTDGCLKLWSVEDGRVIRTYEGHVNNRNFVGL 162
Query: 325 ALTQNANLAASGAADFTAKLWDARYGDMV 411
++ +N L G+ + ++D R+G V
Sbjct: 163 SVWRNGALFGCGSENNRVFVYDRRWGKPV 191
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 43.6 bits (98), Expect = 2e-04
Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 3/111 (2%)
Frame = +1
Query: 331 TQNANLAASGAADFTAKLWDARYGDMVHTFE-HEHIVKSVNFNADDTLLVTASNEKLIRV 507
+ + + AS D A LW T E H ++ + F+ L T+S +K +RV
Sbjct: 660 SSDGKMLASAGHDKKAVLWYTDTMKPKTTLEEHTAMITDIRFSPSQLRLATSSFDKTVRV 719
Query: 508 FDLNKLEAGPIEKINGHTSSIRHAVF--LNNSRIVSVSDDNTMRVWDRNSG 654
+D + + + GH+S + F + + I S +DN +R W N+G
Sbjct: 720 WDADN-KGYSLRTFMGHSSMVTSLDFHPIKDDLICSCDNDNEIRYWSINNG 769
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 43.2 bits (97), Expect = 2e-04
Identities = 45/197 (22%), Positives = 84/197 (42%), Gaps = 9/197 (4%)
Frame = +1
Query: 292 FEGHKGAVWGVALTQNANLAASGAADFTAKLWDAR-YG-DMVHTFEHEHIVKSVNFNADD 465
++GHK V VA N ASG+ D TA++W+ +G E + SV+ D
Sbjct: 16 YQGHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQLCWD 75
Query: 466 ----TLLVTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVFLNNSRIVSVSDDNTMR 633
L+ TAS +K +R++D + +++G +I + + + + + D+ +
Sbjct: 76 PKHSDLVATASGDKSVRLWDARSGKCTQQVELSGENINITYKP--DGTHVAVGNRDDELT 133
Query: 634 VWDRNSGEEVQKVEFQSVPNSLXLSRDG--AILTVAHGTNVSFYTSDTMRKLREFPVPTK 807
+ D + + + +F N + + G LT GT V + +++ L T
Sbjct: 134 ILDVRKFKPLHRRKFNYEVNEIAWNMPGDFFFLTTGLGT-VEVLSYPSLKPLDTLTAHTA 192
Query: 808 -CYSASLAPXRATFVCG 855
CY ++ P F G
Sbjct: 193 GCYCIAIDPKGRYFAVG 209
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 43.2 bits (97), Expect = 2e-04
Identities = 41/192 (21%), Positives = 81/192 (42%), Gaps = 8/192 (4%)
Frame = +1
Query: 241 DGKPMLRQGETGDWIGTFEGHKGAVWGVALTQNANLAASGAADFTAKLW----DARYGDM 408
D +L +G + T GH V V +++L + +AD T ++W D Y
Sbjct: 243 DATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACG 302
Query: 409 VHTFEHEHIVKSVNFNADDTLLVTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRH--AV 582
+H V++V + + V+AS + +DL+ + +++ + ++ + A
Sbjct: 303 YTLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLS--SGSCLAQVSDDSKNVDYTAAA 360
Query: 583 FLNNSRIVSV-SDDNTMRVWDRNSGEEVQKVE-FQSVPNSLXLSRDGAILTVAHGTNVSF 756
F + I+ + + +++WD S V K + ++ S +G L A V
Sbjct: 361 FHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAEDGVRL 420
Query: 757 YTSDTMRKLREF 792
+ +RKLR F
Sbjct: 421 W---DLRKLRNF 429
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 43.2 bits (97), Expect = 2e-04
Identities = 41/192 (21%), Positives = 81/192 (42%), Gaps = 8/192 (4%)
Frame = +1
Query: 241 DGKPMLRQGETGDWIGTFEGHKGAVWGVALTQNANLAASGAADFTAKLW----DARYGDM 408
D +L +G + T GH V V +++L + +AD T ++W D Y
Sbjct: 243 DATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACG 302
Query: 409 VHTFEHEHIVKSVNFNADDTLLVTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRH--AV 582
+H V++V + + V+AS + +DL+ + +++ + ++ + A
Sbjct: 303 YTLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLS--SGSCLAQVSDDSKNVDYTAAA 360
Query: 583 FLNNSRIVSV-SDDNTMRVWDRNSGEEVQKVE-FQSVPNSLXLSRDGAILTVAHGTNVSF 756
F + I+ + + +++WD S V K + ++ S +G L A V
Sbjct: 361 FHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAEDGVRL 420
Query: 757 YTSDTMRKLREF 792
+ +RKLR F
Sbjct: 421 W---DLRKLRNF 429
>At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 43.2 bits (97), Expect = 2e-04
Identities = 52/217 (23%), Positives = 92/217 (42%), Gaps = 16/217 (7%)
Frame = +1
Query: 190 DFSDVTKDGYYLISACKDGKPM-LRQGETGDWIGTFEGHKGAVWGVA--LTQNANLAASG 360
D S T + + C D K + + TG TFEGH+ V+ V +N S
Sbjct: 467 DISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSVCPHYKENIQFIFST 526
Query: 361 AADFTAKLWDARYGDMVHTFEHE---HIVKSVNFNADDTLLVTASNEKLIRVF--DLNKL 525
A D K W Y +M +++ ++ ++AD T L + K F + N+
Sbjct: 527 ALDGKIKAW--LYDNMGSRVDYDAPGRWCTTMAYSADGTRLFSCGTSKDGESFIVEWNES 584
Query: 526 EAGPIEKING-HTSSIRHAVF-LNNSRIVSVSDDNTMRVWDRNSGEEVQKVE----FQSV 687
E G H S+ F +R ++ DD +++ WD ++ + + ++ Q+
Sbjct: 585 EGAVKRTYQGFHKRSLGVVQFDTTKNRYLAAGDDFSIKFWDMDAVQLLTAIDGDGGLQAS 644
Query: 688 PNSLXLSRDGAILTVAHGTNV--SFYTSDTMRKLREF 792
P + +++G++L V+ NV SD +R L F
Sbjct: 645 PR-IRFNKEGSLLAVSGNENVIKIMANSDGLRLLHTF 680
Score = 30.3 bits (65), Expect = 1.7
Identities = 22/54 (40%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Frame = +1
Query: 295 EGHKGAVWGVAL-TQNANLAASGAADF-TAKLWDARYGDMVHTFE-HEHIVKSV 447
+ H G V ++ T N L D T K+WDA G HTFE HE V SV
Sbjct: 459 DAHVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSV 512
Score = 28.3 bits (60), Expect = 6.9
Identities = 25/114 (21%), Positives = 50/114 (43%), Gaps = 8/114 (7%)
Frame = +1
Query: 373 TAKLWDARYGDM-VHTFEHEHIVKSVN---FNADDTLLVTASNEKLIRVFDLNKLEAGPI 540
T K+WD M + + V SVN ++ D +L A + +++++ + E
Sbjct: 395 TFKVWDLSKCSMPLQAALVKEPVVSVNRVIWSPDGSLFGVAYSRHIVQLYSYHGGEDMRQ 454
Query: 541 E-KINGHTSSIRHAVFLNNSR---IVSVSDDNTMRVWDRNSGEEVQKVEFQSVP 690
+I+ H + F ++ +++ DD T++VWD +G + E P
Sbjct: 455 HLEIDAHVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHTFEGHEAP 508
>At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 43.2 bits (97), Expect = 2e-04
Identities = 52/217 (23%), Positives = 92/217 (42%), Gaps = 16/217 (7%)
Frame = +1
Query: 190 DFSDVTKDGYYLISACKDGKPM-LRQGETGDWIGTFEGHKGAVWGVA--LTQNANLAASG 360
D S T + + C D K + + TG TFEGH+ V+ V +N S
Sbjct: 467 DISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSVCPHYKENIQFIFST 526
Query: 361 AADFTAKLWDARYGDMVHTFEHE---HIVKSVNFNADDTLLVTASNEKLIRVF--DLNKL 525
A D K W Y +M +++ ++ ++AD T L + K F + N+
Sbjct: 527 ALDGKIKAW--LYDNMGSRVDYDAPGRWCTTMAYSADGTRLFSCGTSKDGESFIVEWNES 584
Query: 526 EAGPIEKING-HTSSIRHAVF-LNNSRIVSVSDDNTMRVWDRNSGEEVQKVE----FQSV 687
E G H S+ F +R ++ DD +++ WD ++ + + ++ Q+
Sbjct: 585 EGAVKRTYQGFHKRSLGVVQFDTTKNRYLAAGDDFSIKFWDMDAVQLLTAIDGDGGLQAS 644
Query: 688 PNSLXLSRDGAILTVAHGTNV--SFYTSDTMRKLREF 792
P + +++G++L V+ NV SD +R L F
Sbjct: 645 PR-IRFNKEGSLLAVSGNENVIKIMANSDGLRLLHTF 680
Score = 30.3 bits (65), Expect = 1.7
Identities = 22/54 (40%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Frame = +1
Query: 295 EGHKGAVWGVAL-TQNANLAASGAADF-TAKLWDARYGDMVHTFE-HEHIVKSV 447
+ H G V ++ T N L D T K+WDA G HTFE HE V SV
Sbjct: 459 DAHVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSV 512
Score = 28.3 bits (60), Expect = 6.9
Identities = 25/114 (21%), Positives = 50/114 (43%), Gaps = 8/114 (7%)
Frame = +1
Query: 373 TAKLWDARYGDM-VHTFEHEHIVKSVN---FNADDTLLVTASNEKLIRVFDLNKLEAGPI 540
T K+WD M + + V SVN ++ D +L A + +++++ + E
Sbjct: 395 TFKVWDLSKCSMPLQAALVKEPVVSVNRVIWSPDGSLFGVAYSRHIVQLYSYHGGEDMRQ 454
Query: 541 E-KINGHTSSIRHAVFLNNSR---IVSVSDDNTMRVWDRNSGEEVQKVEFQSVP 690
+I+ H + F ++ +++ DD T++VWD +G + E P
Sbjct: 455 HLEIDAHVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHTFEGHEAP 508
>At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]; similar to rab11 binding protein GI:4512103
from [Bos taurus]
Length = 593
Score = 42.7 bits (96), Expect = 3e-04
Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 1/115 (0%)
Frame = +1
Query: 298 GHKGAVWGVALTQNANLAASGAADFTAKLWDARYGD-MVHTFEHEHIVKSVNFNADDTLL 474
GHKG +W + + + A+G D K+W D ++ +F + + +N A L
Sbjct: 196 GHKGKIWTLKFSPDGKYLATGGEDGVVKIWRITLSDSLLASFLRQQ--EPINQQAALVLF 253
Query: 475 VTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVFLNNSRIVSVSDDNTMRVW 639
+K + E P +++ GHT + + +++ ++S S D T+R+W
Sbjct: 254 P----QKAFHI------EETPFQELYGHTGDVLDLAWSDSNLLLSASKDKTVRLW 298
Score = 37.5 bits (83), Expect = 0.011
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = +1
Query: 298 GHKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHTFEHEHIVKSVNFN 456
GH G V +A + ++NL S + D T +LW +H F H + V V FN
Sbjct: 270 GHTGDVLDLAWS-DSNLLLSASKDKTVRLWRTGCDQCLHVFHHNNYVTCVEFN 321
Score = 29.9 bits (64), Expect = 2.3
Identities = 49/211 (23%), Positives = 87/211 (41%), Gaps = 9/211 (4%)
Frame = +1
Query: 163 GHTRPVVHLDFSDVTKDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALTQ-N 339
GHT V+ L +SD L+SA KD L + + F H V V N
Sbjct: 270 GHTGDVLDLAWSDSN----LLLSASKDKTVRLWRTGCDQCLHVFH-HNNYVTCVEFNPVN 324
Query: 340 ANLAASGAADFTAKLWDARYGDMVHTFEHEHIVKSVNFNADDTLLVT---ASNEKLIRVF 510
N ASG+ D A++W +V + + ++++ + V N + ++
Sbjct: 325 KNNFASGSIDGKARIWGLSEERVVAWTDVRDSISAISYQPNGNGFVVGCITGNCRFYQIL 384
Query: 511 DLNKLEAGPIEKINGHTSSIRHAVFL--NNSRIVSVSDDNTMRVWDRNSGEEVQKV--EF 678
D + + I I G + I F ++ +I+ S+D+ +R++D+ K F
Sbjct: 385 DNDVIMDEQI-LIRGR-NRITAVEFCPGSSEKILVSSEDSKVRIFDKTQMIHKFKAPSNF 442
Query: 679 QSVPNSLXLSRDGA-ILTVAHGTNVSFYTSD 768
++ +S G IL+V G V + +D
Sbjct: 443 GRQSSASFVSSTGKHILSVRRGVGVYLWNND 473
>At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6
WD-40 repeats (PF0400); identical to WD-40 repeat
protein (SP:O22467) [Arabidopsis thaliana]
Length = 424
Score = 42.3 bits (95), Expect = 4e-04
Identities = 36/118 (30%), Positives = 62/118 (52%), Gaps = 17/118 (14%)
Frame = +1
Query: 337 NANLAASGAADFTAKLWDAR-YGDMVHTFE-HEHIVKSVNFNA-DDTLLVTASNEKLIRV 507
N + A+G+ D T KL+D R +HTF+ H+ V V +N ++T+L + + + V
Sbjct: 285 NEWVVATGSTDKTVKLFDLRKLSTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMV 344
Query: 508 FDLNKL---------EAGPIEKI---NGHTSSIRHAVF--LNNSRIVSVSDDNTMRVW 639
+DL+++ E GP E + GHTS I + + I SV++DN +++W
Sbjct: 345 WDLSRIDEEQTVEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIW 402
>At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 698
Score = 42.3 bits (95), Expect = 4e-04
Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +1
Query: 292 FEGHKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHTFEHEHIVKSVNFN-ADDT 468
F GH G + ++ ++N N S + D + +LW D + F H + V SV FN DD
Sbjct: 352 FLGHSGDILDISWSKN-NRLLSASVDNSVRLWQIGCEDCLGIFSHNNYVTSVQFNPVDDD 410
Query: 469 LLVTASNEKLIRVFDLNKLE 528
++ S + +R++ ++ +
Sbjct: 411 HFISGSIDGKVRIWSASQCQ 430
Score = 32.3 bits (70), Expect = 0.42
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +1
Query: 535 PIEKINGHTSSIRHAVFLNNSRIVSVSDDNTMRVW 639
P+ + GH+ I + N+R++S S DN++R+W
Sbjct: 348 PLHEFLGHSGDILDISWSKNNRLLSASVDNSVRLW 382
>At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 694
Score = 42.3 bits (95), Expect = 4e-04
Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +1
Query: 292 FEGHKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHTFEHEHIVKSVNFN-ADDT 468
F GH G + ++ ++N N S + D + +LW D + F H + V SV FN DD
Sbjct: 352 FLGHSGDILDISWSKN-NRLLSASVDNSVRLWQIGCEDCLGIFSHNNYVTSVQFNPVDDD 410
Query: 469 LLVTASNEKLIRVFDLNKLE 528
++ S + +R++ ++ +
Sbjct: 411 HFISGSIDGKVRIWSASQCQ 430
Score = 32.3 bits (70), Expect = 0.42
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +1
Query: 535 PIEKINGHTSSIRHAVFLNNSRIVSVSDDNTMRVW 639
P+ + GH+ I + N+R++S S DN++R+W
Sbjct: 348 PLHEFLGHSGDILDISWSKNNRLLSASVDNSVRLW 382
>At1g04510.1 68414.m00442 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 523
Score = 42.3 bits (95), Expect = 4e-04
Identities = 40/194 (20%), Positives = 76/194 (39%), Gaps = 7/194 (3%)
Frame = +1
Query: 241 DGKPMLRQGETGDWIGTFEGHKGAVWGVALTQNANLAASGAADFTAKLW----DARYGDM 408
D +L +G + T GH V + + +L + ++D T ++W D Y
Sbjct: 243 DTTAVLFDRPSGQILSTLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGNYTSR 302
Query: 409 VHTFEHEHIVKSVNFNADDTLLVTASNEKLIRVFDLNK-LEAGPIEKINGHTSSIRHAVF 585
+H V++V +A + V+AS + +DL+ L + + + + A F
Sbjct: 303 HTLKDHSAEVRAVTVHATNKYFVSASLDSTWCFYDLSSGLCLAQVTDASENDVNYTAAAF 362
Query: 586 LNNSRIVSV-SDDNTMRVWDRNSGEEVQKV-EFQSVPNSLXLSRDGAILTVAHGTNVSFY 759
+ I+ + + +++WD S V K S+ S +G L A V +
Sbjct: 363 HPDGLILGTGTAQSIVKIWDVKSQANVAKFGGHNGEITSISFSENGYFLATAALDGVRLW 422
Query: 760 TSDTMRKLREFPVP 801
++ R F P
Sbjct: 423 DLRKLKNFRTFDFP 436
>At4g32990.1 68417.m04692 transducin family protein / WD-40 repeat
family protein HIRA protein, Drosophila melanogaster,
PID:e1250847
Length = 318
Score = 41.9 bits (94), Expect = 5e-04
Identities = 22/76 (28%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Frame = +1
Query: 424 HEHIVKSVNFNADDTLLVTASNEKLIRVFDLNKLEAGPIEKI---NGHTSSIRHAVFLNN 594
HE VKSV++NA +LL T +K + ++++ E + I GH+ ++ ++
Sbjct: 91 HESEVKSVSWNASGSLLATCGRDKSVWIWEIQPEEDDEFDTIAVLTGHSEDVKMVLWHPT 150
Query: 595 SRIV-SVSDDNTMRVW 639
++ S S DNT+++W
Sbjct: 151 MDVLFSCSYDNTIKIW 166
Score = 31.5 bits (68), Expect = 0.74
Identities = 29/133 (21%), Positives = 58/133 (43%), Gaps = 14/133 (10%)
Frame = +1
Query: 283 IGTFEGHKGAVWGVALTQNANLAASGAADFTAKLW------DARYGDMVHTFEHEHIVKS 444
+ GH+ V V+ + +L A+ D + +W D + + H VK
Sbjct: 85 VSVLRGHESEVKSVSWNASGSLLATCGRDKSVWIWEIQPEEDDEFDTIAVLTGHSEDVKM 144
Query: 445 VNFNADDTLLVTASNEKLIRVF-------DLNKLEAGPIEKINGHTSSIRHAVF-LNNSR 600
V ++ +L + S + I+++ D N ++ E NGH+S++ F +
Sbjct: 145 VLWHPTMDVLFSCSYDNTIKIWCSEDEDGDYNCVQT-LSELNNGHSSTVWSISFNAAGDK 203
Query: 601 IVSVSDDNTMRVW 639
+V+ SDD +++W
Sbjct: 204 MVTCSDDLAVKIW 216
>At2g34260.1 68415.m04191 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 353
Score = 41.9 bits (94), Expect = 5e-04
Identities = 29/104 (27%), Positives = 43/104 (41%), Gaps = 2/104 (1%)
Frame = +1
Query: 211 DGYYLISACKDGKPMLRQGETGDWIGTFEG-HKGAVWGVALTQNANLAASGAADFTAKLW 387
DG +++A D + ETG + E H+ AV + ASG K+W
Sbjct: 62 DGQRIVTASADCSILATDVETGAQVAHLENAHEDAV-NTLINVTETTIASGDDKGCVKIW 120
Query: 388 DARYGDMVHTFE-HEHIVKSVNFNADDTLLVTASNEKLIRVFDL 516
D R H F HE + + F +D LV S + + V +L
Sbjct: 121 DTRQRSCSHEFNAHEDYISGMTFASDSMKLVVTSGDGTLSVCNL 164
Score = 31.5 bits (68), Expect = 0.74
Identities = 26/114 (22%), Positives = 48/114 (42%), Gaps = 5/114 (4%)
Frame = +1
Query: 316 WGVALTQNANLAASGAADFTAKLW----DARYGDMVHTFEHEHIVKSVNFNADDTLLVTA 483
+G+ + NL A+G D L+ D+ H+ ++V F D +VTA
Sbjct: 10 FGIDFHPSTNLVAAGLIDGHLHLYRYDSDSSLVRERKVRAHKESCRAVRFIDDGQRIVTA 69
Query: 484 SNEKLIRVFDLNK-LEAGPIEKINGHTSSIRHAVFLNNSRIVSVSDDNTMRVWD 642
S + I D+ + +E N H ++ + + + I S D +++WD
Sbjct: 70 SADCSILATDVETGAQVAHLE--NAHEDAVNTLINVTETTIASGDDKGCVKIWD 121
>At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 447
Score = 41.1 bits (92), Expect = 0.001
Identities = 27/111 (24%), Positives = 48/111 (43%), Gaps = 2/111 (1%)
Frame = +1
Query: 187 LDFSDVTKDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALTQNANLAASGAA 366
++ S ++ DG + D +L G IGT +GH + A N A+G
Sbjct: 280 VNHSSLSPDGKLVAVVGDDPDGLLVDTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQ 339
Query: 367 DFTAKLWDAR-YGDMVHTFE-HEHIVKSVNFNADDTLLVTASNEKLIRVFD 513
D T ++WD R + V + + V+S+ F +D + A + ++D
Sbjct: 340 DKTCRIWDTRKLSESVAVLKGNLGAVRSIRFTSDGRYVAMAEPADFVHIYD 390
>At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 441
Score = 41.1 bits (92), Expect = 0.001
Identities = 27/111 (24%), Positives = 48/111 (43%), Gaps = 2/111 (1%)
Frame = +1
Query: 187 LDFSDVTKDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALTQNANLAASGAA 366
++ S ++ DG + D +L G IGT +GH + A N A+G
Sbjct: 274 VNHSSLSPDGKLVAVVGDDPDGLLVDTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQ 333
Query: 367 DFTAKLWDAR-YGDMVHTFE-HEHIVKSVNFNADDTLLVTASNEKLIRVFD 513
D T ++WD R + V + + V+S+ F +D + A + ++D
Sbjct: 334 DKTCRIWDTRKLSESVAVLKGNLGAVRSIRFTSDGRYVAMAEPADFVHIYD 384
>At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 654
Score = 41.1 bits (92), Expect = 0.001
Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +1
Query: 292 FEGHKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHTFEHEHIVKSVNFN-ADDT 468
F GH G V ++ +++ N S + D T +LW D + F H V SV FN ++
Sbjct: 324 FRGHTGEVLDISWSKD-NYLLSASMDKTVRLWKVGSNDCLGVFAHNSYVTSVQFNPVNEN 382
Query: 469 LLVTASNEKLIRVFDLN 519
++ S + +R+++++
Sbjct: 383 YFMSGSIDGKVRIWNIS 399
Score = 29.1 bits (62), Expect = 4.0
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +1
Query: 535 PIEKINGHTSSIRHAVFLNNSRIVSVSDDNTMRVWDRNSGE 657
P+ + GHT + + ++ ++S S D T+R+W S +
Sbjct: 320 PLYEFRGHTGEVLDISWSKDNYLLSASMDKTVRLWKVGSND 360
>At5g14530.1 68418.m01703 transducin family protein / WD-40 repeat
family protein similar to Will die slowly protein
(SP:Q9V3J8) [Drosophila melanogaster] ; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies, 1 weak)
Length = 330
Score = 41.1 bits (92), Expect = 0.001
Identities = 28/126 (22%), Positives = 57/126 (45%), Gaps = 3/126 (2%)
Frame = +1
Query: 292 FEGHKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHTFEHEHIVKSVNFNADDTL 471
F+GHK V + ++ + SG+ D + +LWD R + H +V ++ +
Sbjct: 110 FKGHKDRVVSLCMSPINDSFMSGSLDRSVRLWDLRV-NACQGILHLRGRPAVAYDQQGLV 168
Query: 472 LVTASNEKLIRVFDLNKLEAGPIEK--INGHTSSIRHAVFLNNSR-IVSVSDDNTMRVWD 642
A +++FD + GP + + G T+ + F N+ + ++ + +N + V D
Sbjct: 169 FAIAMEGGAVKLFDSRCYDKGPFDTFLVGGDTAEVNDIKFSNDGKSMLLTTTNNNIYVLD 228
Query: 643 RNSGEE 660
GE+
Sbjct: 229 AYRGEK 234
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +1
Query: 436 VKSVNFNADDTLLVTASNEKLIRVFDL 516
+ SV F+ D LLVT+S + +R+FD+
Sbjct: 27 IHSVGFHRTDDLLVTSSEDDSLRLFDI 53
>At4g03020.1 68417.m00410 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to L. erythrorhizon LEC14B, GenBank accession
number Q40153
Length = 493
Score = 41.1 bits (92), Expect = 0.001
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Frame = +1
Query: 442 SVNFNADDTLLVTASNEKLIRVFDLNKLEAGPIE-KINGHTSSIRHAVFLNNSR--IVSV 612
SV F+ D +V S++ I V+DL EA + + HTS + F + S I+S
Sbjct: 234 SVKFSTDGREVVAGSSDDSIYVYDL---EANRVSLRTVAHTSDVNTVCFADESGNLILSG 290
Query: 613 SDDNTMRVWDR 645
SDDN +VWDR
Sbjct: 291 SDDNLCKVWDR 301
>At1g80670.1 68414.m09466 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400) (1
weak); similar to Hypothetical RAE1-like
protein.(SP:Q38942) [Arabidopsis thaliana]; similar to
mRNA-associated protein mrnp 41 ((mRNA export protein)
(GB:AAC28126) (GI:1903456)(RAE1) (MRNP41) (SP:P78406)
[Homo sapiens]
Length = 349
Score = 41.1 bits (92), Expect = 0.001
Identities = 34/128 (26%), Positives = 56/128 (43%)
Frame = +1
Query: 133 TLKQVPLTCGGHTRPVVHLDFSDVTKDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGA 312
+L P H +PV+ + D DG + S D + + +G T H+G
Sbjct: 60 SLASAPKASISHDQPVLCSAWKD---DGTTVFSGGCDKQAKMWPLLSGGQPVTVAMHEGP 116
Query: 313 VWGVALTQNANLAASGAADFTAKLWDARYGDMVHTFEHEHIVKSVNFNADDTLLVTASNE 492
+ +A NL A+G+ D T K WD R + VHT + K + L+V + +
Sbjct: 117 IAAMAWIPGMNLLATGSWDKTLKYWDTRQQNPVHTQQLPD--KCYTLSVKHPLMVVGTAD 174
Query: 493 KLIRVFDL 516
+ + VF+L
Sbjct: 175 RNLIVFNL 182
>At4g01860.2 68417.m00244 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +1
Query: 511 DLNKLEAGPIEKINGHTSSIRHAVF-LNNSRIVSVSDDNTMRVWDRNSGEEVQKVEF 678
D A + ++ GH SI V+ L+ S+IVSVSDD + R+W+ +S E V V F
Sbjct: 219 DHGHYSASHMLRLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLF 275
Score = 37.1 bits (82), Expect = 0.015
Identities = 28/122 (22%), Positives = 60/122 (49%), Gaps = 1/122 (0%)
Frame = +1
Query: 298 GHKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHTFEHEHIVKSVNFNADDTLLV 477
GH+G+++ + + + + S + D +A++W+ ++V H V+ + D+L+V
Sbjct: 233 GHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHSVRVWDCCISDSLIV 292
Query: 478 TASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVFLNNSRIVSVSDDNTMRVWD-RNSG 654
TA + RV+ ++ + I++ G R N+S +V+ D+ ++V N G
Sbjct: 293 TAGEDCTCRVWGVDGTQLEVIKEHIGR-GIWRCLYDPNSSLLVTAGFDSAIKVHQLHNRG 351
Query: 655 EE 660
E
Sbjct: 352 SE 353
>At4g01860.1 68417.m00243 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +1
Query: 511 DLNKLEAGPIEKINGHTSSIRHAVF-LNNSRIVSVSDDNTMRVWDRNSGEEVQKVEF 678
D A + ++ GH SI V+ L+ S+IVSVSDD + R+W+ +S E V V F
Sbjct: 219 DHGHYSASHMLRLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLF 275
Score = 37.1 bits (82), Expect = 0.015
Identities = 28/122 (22%), Positives = 60/122 (49%), Gaps = 1/122 (0%)
Frame = +1
Query: 298 GHKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHTFEHEHIVKSVNFNADDTLLV 477
GH+G+++ + + + + S + D +A++W+ ++V H V+ + D+L+V
Sbjct: 233 GHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHSVRVWDCCISDSLIV 292
Query: 478 TASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVFLNNSRIVSVSDDNTMRVWD-RNSG 654
TA + RV+ ++ + I++ G R N+S +V+ D+ ++V N G
Sbjct: 293 TAGEDCTCRVWGVDGTQLEVIKEHIGR-GIWRCLYDPNSSLLVTAGFDSAIKVHQLHNRG 351
Query: 655 EE 660
E
Sbjct: 352 SE 353
>At5g60940.2 68418.m07645 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 337
Score = 40.3 bits (90), Expect = 0.002
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Frame = +1
Query: 436 VKSVNFNADDTLLVTASNEKLIRVFDLNKLEAGPIEKI-NGH-TSSIRHAVFLNNSRIV- 606
+ V +++ ++ +TAS + IR+FD + A + I N H S + AVF + R V
Sbjct: 177 INQVRYSSTGSIYITASKDGAIRLFD--GVSAKCVRSIGNAHGKSEVTSAVFTKDQRFVL 234
Query: 607 SVSDDNTMRVWDRNSGEEVQK 669
S D+T+++W+ SG V++
Sbjct: 235 SSGKDSTVKLWEIGSGRMVKE 255
Score = 38.7 bits (86), Expect = 0.005
Identities = 44/189 (23%), Positives = 81/189 (42%), Gaps = 15/189 (7%)
Frame = +1
Query: 289 TFEGHKGAVWGVALTQNANLAASGAADFTAKLW-----------DARYGDMVHTF-EHEH 432
T HK V + + A+G AD + KL+ D + ++ TF +H
Sbjct: 26 TLSEHKSVVRCARFSPDGMFFATGGADTSIKLFEVPKVKQMISGDTQARPLIRTFYDHAE 85
Query: 433 IVKSVNFNADDTLLVTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVFLNNSRIVSV 612
+ ++F+ T+L++++ + I+ FD +K A K+ T ++R F + +
Sbjct: 86 PINDLDFHPRSTILISSAKDNCIKFFDFSKTTAKRAFKVFQDTHNVRSISFHPSGEFLLA 145
Query: 613 SDDNTM-RVWDRNSGEEVQKVEFQSVPNSLXLSRDGAILTVAHGTNVSFY-TSDTMRKLR 786
D+ + ++D N+ + F P+S GAI V + + S Y T+ +R
Sbjct: 146 GTDHPIPHLYDVNTYQCFLPSNF---PDS---GVSGAINQVRYSSTGSIYITASKDGAIR 199
Query: 787 EFP-VPTKC 810
F V KC
Sbjct: 200 LFDGVSAKC 208
>At5g60940.1 68418.m07644 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 429
Score = 40.3 bits (90), Expect = 0.002
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Frame = +1
Query: 436 VKSVNFNADDTLLVTASNEKLIRVFDLNKLEAGPIEKI-NGH-TSSIRHAVFLNNSRIV- 606
+ V +++ ++ +TAS + IR+FD + A + I N H S + AVF + R V
Sbjct: 269 INQVRYSSTGSIYITASKDGAIRLFD--GVSAKCVRSIGNAHGKSEVTSAVFTKDQRFVL 326
Query: 607 SVSDDNTMRVWDRNSGEEVQK 669
S D+T+++W+ SG V++
Sbjct: 327 SSGKDSTVKLWEIGSGRMVKE 347
Score = 38.7 bits (86), Expect = 0.005
Identities = 44/189 (23%), Positives = 81/189 (42%), Gaps = 15/189 (7%)
Frame = +1
Query: 289 TFEGHKGAVWGVALTQNANLAASGAADFTAKLW-----------DARYGDMVHTF-EHEH 432
T HK V + + A+G AD + KL+ D + ++ TF +H
Sbjct: 118 TLSEHKSVVRCARFSPDGMFFATGGADTSIKLFEVPKVKQMISGDTQARPLIRTFYDHAE 177
Query: 433 IVKSVNFNADDTLLVTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVFLNNSRIVSV 612
+ ++F+ T+L++++ + I+ FD +K A K+ T ++R F + +
Sbjct: 178 PINDLDFHPRSTILISSAKDNCIKFFDFSKTTAKRAFKVFQDTHNVRSISFHPSGEFLLA 237
Query: 613 SDDNTM-RVWDRNSGEEVQKVEFQSVPNSLXLSRDGAILTVAHGTNVSFY-TSDTMRKLR 786
D+ + ++D N+ + F P+S GAI V + + S Y T+ +R
Sbjct: 238 GTDHPIPHLYDVNTYQCFLPSNF---PDS---GVSGAINQVRYSSTGSIYITASKDGAIR 291
Query: 787 EFP-VPTKC 810
F V KC
Sbjct: 292 LFDGVSAKC 300
>At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 39.9 bits (89), Expect = 0.002
Identities = 48/201 (23%), Positives = 82/201 (40%), Gaps = 12/201 (5%)
Frame = +1
Query: 226 ISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALTQNANL--AASGAADFTAKLW-DAR 396
+ C D K + +G + TFEGH+ V+ + Q N+ S A D K W
Sbjct: 470 VVTCGDDKLIKVWDLSGKKLFTFEGHEAPVYSICPHQKENIQFIFSTALDGKIKAWLYDN 529
Query: 397 YGDMVHTFEHEHIVKSVNFNADDTLLVTASNEKLIRVF--DLNKLEAGPIEKINGHTSSI 570
G V ++ ++AD + L + K F + N+ E G
Sbjct: 530 VGSRVDYDAPGQWCTTMLYSADGSRLFSCGTSKEGDSFLVEWNESEGALKRTYLGFRKKS 589
Query: 571 RHAVFLN--NSRIVSVSDDNTMRVWDRNSGEEVQKVEFQ-SVPN--SLXLSRDGAILTVA 735
V + +R ++V +DN ++ W+ ++ + VE + +PN L ++DG +L V
Sbjct: 590 AGVVQFDTTRNRFLAVGEDNQIKFWNMDNTNLLTVVEAEGGLPNLPRLRFNKDGNLLAVT 649
Query: 736 HGTN--VSFYTSDTMRKLREF 792
N +D +R LR F
Sbjct: 650 TADNGFKILANTDGLRTLRAF 670
Score = 30.7 bits (66), Expect = 1.3
Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 11/130 (8%)
Frame = +1
Query: 295 EGHKGAVWGVALTQNANLAASGAAD-----FTAKLWDARYGDMVHTFEHEHIV--KSVNF 453
+GH+ + G+A + N+ S AD +TA W+ + + + V V F
Sbjct: 912 KGHQKHITGLAFSTALNILVSSGADAQLFFWTADSWEKKKSSAIQLPPGKAPVGDTRVQF 971
Query: 454 NADDTLLVTASNEKLIRVFDLNKLEAGPIEK---INGHTSSIRHAVFLNNSRIVSVS-DD 621
+ +D + + S+E + ++D +K+E I K +S I A + NS++V S D
Sbjct: 972 H-NDQIQLLVSHETQLAIYDASKMEC--IHKWVPQEALSSPITSASYSCNSQLVYASFAD 1028
Query: 622 NTMRVWDRNS 651
+ V+D S
Sbjct: 1029 GNIAVFDAES 1038
>At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 WD-40
repeats domain (PF00400) (6 weak)
Length = 1120
Score = 39.9 bits (89), Expect = 0.002
Identities = 45/201 (22%), Positives = 87/201 (43%), Gaps = 14/201 (6%)
Frame = +1
Query: 190 DFSDVTKDGYYLISACKDGKPM-LRQGETGDWIGTFEGHKGAVWGVA--LTQNANLAASG 360
D + T + ++ C D K + + TG TFEGH+ V+ + +N S
Sbjct: 467 DIAFSTPNKQLCVTTCGDDKTIKVWDAATGVKRYTFEGHEAPVYSICPHYKENIQFIFST 526
Query: 361 AADFTAKLWDARYGDMVHTFEHE---HIVKSVNFNADDTLLVTASNEKLIRVF--DLNKL 525
A D K W Y +M ++E ++ ++AD T L + K F + N+
Sbjct: 527 ALDGKIKAW--LYDNMGSRVDYEAPGRWCTTMAYSADGTRLFSCGTSKDGESFIVEWNES 584
Query: 526 EAGPIEKING-HTSSIRHAVF-LNNSRIVSVSDDNTMRVWDRNSGEEVQKVE----FQSV 687
E G H S+ F +R ++ DD +++ WD ++ + + ++ Q+
Sbjct: 585 EGAVKRTYQGFHKRSLGVVQFDTTKNRYLAAGDDFSIKFWDMDTIQLLTAIDADGGLQAS 644
Query: 688 PNSLXLSRDGAILTVAHGTNV 750
P + +++G++L V+ N+
Sbjct: 645 PR-IRFNKEGSLLAVSANDNM 664
Score = 29.9 bits (64), Expect = 2.3
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Frame = +1
Query: 295 EGHKGAVWGVAL-TQNANLAASGAADF-TAKLWDARYGDMVHTFE-HEHIVKSV 447
+ H G V +A T N L + D T K+WDA G +TFE HE V S+
Sbjct: 459 DAHVGGVNDIAFSTPNKQLCVTTCGDDKTIKVWDAATGVKRYTFEGHEAPVYSI 512
>At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 WD-40
repeats domain (PF00400) (6 weak)
Length = 1120
Score = 39.9 bits (89), Expect = 0.002
Identities = 45/201 (22%), Positives = 87/201 (43%), Gaps = 14/201 (6%)
Frame = +1
Query: 190 DFSDVTKDGYYLISACKDGKPM-LRQGETGDWIGTFEGHKGAVWGVA--LTQNANLAASG 360
D + T + ++ C D K + + TG TFEGH+ V+ + +N S
Sbjct: 467 DIAFSTPNKQLCVTTCGDDKTIKVWDAATGVKRYTFEGHEAPVYSICPHYKENIQFIFST 526
Query: 361 AADFTAKLWDARYGDMVHTFEHE---HIVKSVNFNADDTLLVTASNEKLIRVF--DLNKL 525
A D K W Y +M ++E ++ ++AD T L + K F + N+
Sbjct: 527 ALDGKIKAW--LYDNMGSRVDYEAPGRWCTTMAYSADGTRLFSCGTSKDGESFIVEWNES 584
Query: 526 EAGPIEKING-HTSSIRHAVF-LNNSRIVSVSDDNTMRVWDRNSGEEVQKVE----FQSV 687
E G H S+ F +R ++ DD +++ WD ++ + + ++ Q+
Sbjct: 585 EGAVKRTYQGFHKRSLGVVQFDTTKNRYLAAGDDFSIKFWDMDTIQLLTAIDADGGLQAS 644
Query: 688 PNSLXLSRDGAILTVAHGTNV 750
P + +++G++L V+ N+
Sbjct: 645 PR-IRFNKEGSLLAVSANDNM 664
Score = 29.9 bits (64), Expect = 2.3
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Frame = +1
Query: 295 EGHKGAVWGVAL-TQNANLAASGAADF-TAKLWDARYGDMVHTFE-HEHIVKSV 447
+ H G V +A T N L + D T K+WDA G +TFE HE V S+
Sbjct: 459 DAHVGGVNDIAFSTPNKQLCVTTCGDDKTIKVWDAATGVKRYTFEGHEAPVYSI 512
>At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/77 (23%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +1
Query: 295 EGHKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHTFE-HEHIVKSVNFNADDTL 471
+GHK +V+ +A+ + SG + ++WD R G H V+ + ++
Sbjct: 210 KGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRF 269
Query: 472 LVTASNEKLIRVFDLNK 522
++ S++ +IR++DL +
Sbjct: 270 CLSGSSDSMIRLWDLGQ 286
Score = 32.7 bits (71), Expect = 0.32
Identities = 29/129 (22%), Positives = 49/129 (37%), Gaps = 1/129 (0%)
Frame = +1
Query: 148 PLTCGGHTRPVVHLDFSDVTKDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVA 327
P GH V L +D G L+S + + TG GH V +
Sbjct: 206 PTIAKGHKESVYALAMNDT---GTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLL 262
Query: 328 LTQNANLAASGAADFTAKLWDARYGDMVHTFE-HEHIVKSVNFNADDTLLVTASNEKLIR 504
L SG++D +LWD +HT+ H V ++ N + + + ++ +
Sbjct: 263 LDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFSHVYSGGRDQCLY 322
Query: 505 VFDLNKLEA 531
+ DL E+
Sbjct: 323 LTDLATRES 331
>At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/77 (23%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +1
Query: 295 EGHKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHTFE-HEHIVKSVNFNADDTL 471
+GHK +V+ +A+ + SG + ++WD R G H V+ + ++
Sbjct: 210 KGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRF 269
Query: 472 LVTASNEKLIRVFDLNK 522
++ S++ +IR++DL +
Sbjct: 270 CLSGSSDSMIRLWDLGQ 286
Score = 32.7 bits (71), Expect = 0.32
Identities = 29/129 (22%), Positives = 49/129 (37%), Gaps = 1/129 (0%)
Frame = +1
Query: 148 PLTCGGHTRPVVHLDFSDVTKDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVA 327
P GH V L +D G L+S + + TG GH V +
Sbjct: 206 PTIAKGHKESVYALAMNDT---GTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLL 262
Query: 328 LTQNANLAASGAADFTAKLWDARYGDMVHTFE-HEHIVKSVNFNADDTLLVTASNEKLIR 504
L SG++D +LWD +HT+ H V ++ N + + + ++ +
Sbjct: 263 LDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFSHVYSGGRDQCLY 322
Query: 505 VFDLNKLEA 531
+ DL E+
Sbjct: 323 LTDLATRES 331
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 39.1 bits (87), Expect = 0.004
Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +1
Query: 289 TFEGHKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHTFEHEHIVKSVNFN-ADD 465
+F+GH V +A +++ +L +S + D T +LW+ + F H V + FN DD
Sbjct: 508 SFQGHVDDVLDLAWSKSQHLLSS-SMDKTVRLWNLSSQTCLKVFSHSDYVTCIQFNPVDD 566
Query: 466 TLLVTASNEKLIRVFDL 516
++ S + +RV+ +
Sbjct: 567 RYFISGSLDAKVRVWSI 583
>At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 825
Score = 38.3 bits (85), Expect = 0.006
Identities = 20/77 (25%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +1
Query: 289 TFEGHKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHTFEHEHIVKSVNFN-ADD 465
+F GH V ++ +++ +L +S + D T +LWD + F H V + FN DD
Sbjct: 463 SFVGHLDDVLDLSWSKSQHLLSS-SMDKTVRLWDLSSKTCLKVFSHSDYVTCIQFNPVDD 521
Query: 466 TLLVTASNEKLIRVFDL 516
++ S + +R++ +
Sbjct: 522 NYFISGSLDAKVRIWSI 538
Score = 29.9 bits (64), Expect = 2.3
Identities = 27/139 (19%), Positives = 59/139 (42%), Gaps = 20/139 (14%)
Frame = +1
Query: 295 EGHKGAVWGVALTQNANLAASGAADFTAKLW----DARYGDMVHTFEHE----HIVKSVN 450
+ HKG++W + + + AS D ++W R G+++ + E ++ N
Sbjct: 360 QAHKGSIWSIKFSLDGRYLASAGEDCVIQIWKVVESERKGELLSMDKQEDGSINLFLLAN 419
Query: 451 FNADDTLLV------TASNEKLIRVFDLNKLEA------GPIEKINGHTSSIRHAVFLNN 594
+ + + T+ + K + + ++ EA P+ GH + + +
Sbjct: 420 GSPEPVSMSPKRRGRTSFSRKSVSLDNVLVPEAVFGLSEKPVCSFVGHLDDVLDLSWSKS 479
Query: 595 SRIVSVSDDNTMRVWDRNS 651
++S S D T+R+WD +S
Sbjct: 480 QHLLSSSMDKTVRLWDLSS 498
>At5g50120.1 68418.m06207 transducin family protein / WD-40 repeat
family protein Similar to En/Spm-like transposon protein
(gi:2739374)[Arabidopsis thaliana]; similar to
GTP-binding regulatory protein and WD-repeat protein;
contains 7 WD-40 repeats
Length = 388
Score = 38.3 bits (85), Expect = 0.006
Identities = 30/116 (25%), Positives = 48/116 (41%), Gaps = 2/116 (1%)
Frame = +1
Query: 424 HEHIVKSVNFNADDTLLVTASNEKLIRVFDLNKLEAGPIEKI-NGHTSSIRHAVFLNNSR 600
H V + + D TLL + S ++ ++++ + +E N H +I N
Sbjct: 164 HVDAVSGLALSRDGTLLYSVSWDRTLKIWRTTDFKC--LESFTNAHDDAINAVALSENGD 221
Query: 601 IVSVSDDNTMRVWDRNSGEE-VQKVEFQSVPNSLXLSRDGAILTVAHGTNVSFYTS 765
I + S D ++VW +N EE V+K S+ L G GTN S S
Sbjct: 222 IYTGSSDQRIKVWRKNINEENVKKKRKHSLVAILSEHNSGINALALSGTNGSLLHS 277
>At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3
protein (ZFWD3) contains 5 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd3 protein (GP:12057168)
{Arabidopsis thaliana}
Length = 472
Score = 38.3 bits (85), Expect = 0.006
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +1
Query: 538 IEKINGHTSSIRHAVFLNNS-RIVSVSDDNTMRVWDRNSGEEVQKVEFQSVPNSL 699
+ + GH + I+ S ++ SVS D T+ +WD NSG+ V+ + Q+ SL
Sbjct: 180 VAALEGHKNDIKGIALPQGSDKLFSVSGDGTLLIWDCNSGQCVRSINLQAEAGSL 234
Score = 35.9 bits (79), Expect = 0.035
Identities = 26/125 (20%), Positives = 50/125 (40%)
Frame = +1
Query: 283 IGTFEGHKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHTFEHEHIVKSVNFNAD 462
+ EGHK + G+AL Q ++ S + D T +WD G V + + S+
Sbjct: 180 VAALEGHKNDIKGIALPQGSDKLFSVSGDGTLLIWDCNSGQCVRSINLQAEAGSL---IS 236
Query: 463 DTLLVTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVFLNNSRIVSVSDDNTMRVWD 642
+ V ++ F++ + +E + G HA+ N + + + ++ VW
Sbjct: 237 EGPWVFLGLPNAVKAFNVQNSKDVHLEGVVGQV----HAMTAANGMLFAGTSSGSILVWK 292
Query: 643 RNSGE 657
E
Sbjct: 293 ATDSE 297
>At2g34260.2 68415.m04192 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 296
Score = 38.3 bits (85), Expect = 0.006
Identities = 27/100 (27%), Positives = 41/100 (41%), Gaps = 2/100 (2%)
Frame = +1
Query: 223 LISACKDGKPMLRQGETGDWIGTFEG-HKGAVWGVALTQNANLAASGAADFTAKLWDARY 399
+++A D + ETG + E H+ AV + ASG K+WD R
Sbjct: 9 IVTASADCSILATDVETGAQVAHLENAHEDAV-NTLINVTETTIASGDDKGCVKIWDTRQ 67
Query: 400 GDMVHTFE-HEHIVKSVNFNADDTLLVTASNEKLIRVFDL 516
H F HE + + F +D LV S + + V +L
Sbjct: 68 RSCSHEFNAHEDYISGMTFASDSMKLVVTSGDGTLSVCNL 107
>At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4
protein (ZFWD4) contains 6 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd4 protein (GI:12057170)
[Arabidopsis thaliana]
Length = 419
Score = 37.9 bits (84), Expect = 0.009
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 538 IEKINGHTSSIRHAVFLNNS-RIVSVSDDNTMRVWDRNSGEEVQKVEFQSVPNSL 699
+ + GH ++ S ++ SVS D T+RVWD NSG+ V + + SL
Sbjct: 124 VASLEGHNKELKGIALPEGSDKLFSVSIDGTLRVWDCNSGQCVHSINLDAEAGSL 178
Score = 35.1 bits (77), Expect = 0.060
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +1
Query: 283 IGTFEGHKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHT 417
+ + EGH + G+AL + ++ S + D T ++WD G VH+
Sbjct: 124 VASLEGHNKELKGIALPEGSDKLFSVSIDGTLRVWDCNSGQCVHS 168
>At4g05410.1 68417.m00823 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); U3
snoRNP-associated 55-kDa protein, Homo sapiens,
gb:NP_004695; Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) [Podospora anserina]
Length = 504
Score = 37.9 bits (84), Expect = 0.009
Identities = 28/147 (19%), Positives = 60/147 (40%), Gaps = 1/147 (0%)
Frame = +1
Query: 202 VTKDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALTQNANLAASGAADFTAK 381
V+ DG YL + D + T + + F GH+ V + + SG+ D T K
Sbjct: 230 VSSDGRYLATGGVDRHVHIWDVRTREHVQAFPGHRNTVSCLCFRYGTSELYSGSFDRTVK 289
Query: 382 LWDAR-YGDMVHTFEHEHIVKSVNFNADDTLLVTASNEKLIRVFDLNKLEAGPIEKINGH 558
+W+ + H+ + +++ + L + ++ +K+
Sbjct: 290 VWNVEDKAFITENHGHQGEILAIDALRKERALTVGRDRTML----YHKVPESTRMIYRAP 345
Query: 559 TSSIRHAVFLNNSRIVSVSDDNTMRVW 639
SS+ F++++ +S SD+ T+ +W
Sbjct: 346 ASSLESCCFISDNEYLSGSDNGTVALW 372
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 37.9 bits (84), Expect = 0.009
Identities = 22/81 (27%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Frame = +1
Query: 424 HEHIVKSVNFNADDTLLVTASNEKLIRVFDLNKLEAGPIEKI-NGHTSSIRHAVF-LNNS 597
+ HI+K + + + L TAS++K +++++L+ + +EK+ GH + F ++
Sbjct: 217 NSHILKCL-LSPGNKYLATASSDKTVKIWNLDGFK---LEKVLTGHERWVWDCDFSMDGE 272
Query: 598 RIVSVSDDNTMRVWDRNSGEE 660
+V+ S D T R+W +G+E
Sbjct: 273 YLVTASSDTTARLWSMRAGKE 293
Score = 29.1 bits (62), Expect = 4.0
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +1
Query: 298 GHKGAVWGVALTQNANLAASGAADFTAKLWDARYG 402
GH+ VW + + + ++D TA+LW R G
Sbjct: 257 GHERWVWDCDFSMDGEYLVTASSDTTARLWSMRAG 291
>At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat
family protein Similar to U4/U6 small nuclear
ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens];
contains 4 WD-40 repeats
Length = 276
Score = 37.9 bits (84), Expect = 0.009
Identities = 23/95 (24%), Positives = 45/95 (47%), Gaps = 2/95 (2%)
Frame = +1
Query: 292 FEGHKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHTF-EHEHIVKSVNFNADDT 468
F+GH V V + N ASG D ++WD R +++ H ++V V + +
Sbjct: 168 FQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRMRKLLYIIPAHVNLVSQVKYEPQER 227
Query: 469 -LLVTASNEKLIRVFDLNKLEAGPIEKINGHTSSI 570
L TAS++ + ++ + + ++ + GH S +
Sbjct: 228 YFLATASHDMNVNIW--SGRDFSLVKSLVGHESKV 260
Score = 33.5 bits (73), Expect = 0.18
Identities = 31/140 (22%), Positives = 57/140 (40%), Gaps = 4/140 (2%)
Frame = +1
Query: 313 VWGVALTQNANLAASGAADFTAKLWDARYGDMVHTFE-HEHIVKSVNFNADDTLLVTASN 489
+W T AS D A++WD R + F+ H V SV+F+ + L +
Sbjct: 133 IWKTDGTLLQTFKASSGFDSLARVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGE 192
Query: 490 EKLIRVFDLNKLEAGPIEKINGHTSSIRHAVFLNNSR--IVSVSDDNTMRVWDRNSGEEV 663
+ R++DL + + I H + + + R + + S D + +W V
Sbjct: 193 DNQCRIWDLRMRKL--LYIIPAHVNLVSQVKYEPQERYFLATASHDMNVNIWSGRDFSLV 250
Query: 664 QK-VEFQSVPNSLXLSRDGA 720
+ V +S SL ++ D +
Sbjct: 251 KSLVGHESKVASLDIAVDSS 270
>At5g66240.2 68418.m08345 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 331
Score = 37.5 bits (83), Expect = 0.011
Identities = 32/124 (25%), Positives = 48/124 (38%), Gaps = 3/124 (2%)
Frame = +1
Query: 292 FEGHKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHTFEHEHIVKSVNFNADDTL 471
F+GH V ++L SG+ D T LWD R + + D L
Sbjct: 116 FKGHHDRVVSLSLCSGGECFISGSLDRTVLLWDQRVEKCQGLLRVQG--RPAAAYDDQGL 173
Query: 472 LVTASNEKLIRVFDLNKLEAGPIE--KINGHTSSIRHAVFLNNSRIVSVSD-DNTMRVWD 642
+ + IR+FD E GP E + G S F N+ R++ ++ D + V D
Sbjct: 174 IFAIAFGGYIRMFDARMYEKGPFEIFSVGGDLSEANVVKFSNDGRLMLLTTMDGFIHVLD 233
Query: 643 RNSG 654
G
Sbjct: 234 SFRG 237
>At5g66240.1 68418.m08344 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 328
Score = 37.5 bits (83), Expect = 0.011
Identities = 32/124 (25%), Positives = 48/124 (38%), Gaps = 3/124 (2%)
Frame = +1
Query: 292 FEGHKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHTFEHEHIVKSVNFNADDTL 471
F+GH V ++L SG+ D T LWD R + + D L
Sbjct: 113 FKGHHDRVVSLSLCSGGECFISGSLDRTVLLWDQRVEKCQGLLRVQG--RPAAAYDDQGL 170
Query: 472 LVTASNEKLIRVFDLNKLEAGPIE--KINGHTSSIRHAVFLNNSRIVSVSD-DNTMRVWD 642
+ + IR+FD E GP E + G S F N+ R++ ++ D + V D
Sbjct: 171 IFAIAFGGYIRMFDARMYEKGPFEIFSVGGDLSEANVVKFSNDGRLMLLTTMDGFIHVLD 230
Query: 643 RNSG 654
G
Sbjct: 231 SFRG 234
>At5g15550.2 68418.m01821 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 402
Score = 37.5 bits (83), Expect = 0.011
Identities = 33/150 (22%), Positives = 63/150 (42%)
Frame = +1
Query: 298 GHKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHTFEHEHIVKSVNFNADDTLLV 477
GHK +V V+ ++ N+ S + D T LW+ T E E V
Sbjct: 203 GHKASVQSVSAQKSGNMVCSSSWDCTINLWNTNES----TSEGES--------------V 244
Query: 478 TASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVFLNNSRIVSVSDDNTMRVWDRNSGE 657
+ K + ++ E + + GHT + V+ + I S S D+++R WD +G+
Sbjct: 245 SVKKRKGNNQAEESQSEGEAVTSLVGHTQCVSSVVWPEHDVIYSSSWDHSVRRWDVETGK 304
Query: 658 EVQKVEFQSVPNSLXLSRDGAILTVAHGTN 747
+ + N++ + + + L A G++
Sbjct: 305 DSLNLFCGKALNTVDVGGESSALIAAGGSD 334
>At5g15550.1 68418.m01820 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 433
Score = 37.5 bits (83), Expect = 0.011
Identities = 33/150 (22%), Positives = 63/150 (42%)
Frame = +1
Query: 298 GHKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHTFEHEHIVKSVNFNADDTLLV 477
GHK +V V+ ++ N+ S + D T LW+ T E E V
Sbjct: 203 GHKASVQSVSAQKSGNMVCSSSWDCTINLWNTNES----TSEGES--------------V 244
Query: 478 TASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVFLNNSRIVSVSDDNTMRVWDRNSGE 657
+ K + ++ E + + GHT + V+ + I S S D+++R WD +G+
Sbjct: 245 SVKKRKGNNQAEESQSEGEAVTSLVGHTQCVSSVVWPEHDVIYSSSWDHSVRRWDVETGK 304
Query: 658 EVQKVEFQSVPNSLXLSRDGAILTVAHGTN 747
+ + N++ + + + L A G++
Sbjct: 305 DSLNLFCGKALNTVDVGGESSALIAAGGSD 334
>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); rab11 binding protein, Bos
taurus, EMBL:AF117897
Length = 905
Score = 37.5 bits (83), Expect = 0.011
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +1
Query: 283 IGTFEGHKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHTFEHEHIVKSVNFN-A 459
I +F GH V ++ +++ L S + D T +LWD + F H V V FN
Sbjct: 512 ICSFTGHLDDVLDLSWSRS-QLLLSSSMDKTVRLWDIETQSCLKLFAHNDYVTCVQFNPL 570
Query: 460 DDTLLVTASNEKLIRVFDLN 519
D+ ++ S + IR+++++
Sbjct: 571 DEDYFISGSLDAKIRIWNIS 590
Score = 27.9 bits (59), Expect = 9.1
Identities = 8/34 (23%), Positives = 19/34 (55%)
Frame = +1
Query: 295 EGHKGAVWGVALTQNANLAASGAADFTAKLWDAR 396
+ H+G +W + + +++L AS D +W+ +
Sbjct: 408 QAHQGGIWTMKFSPDSHLLASAGEDCAIHVWEVQ 441
>At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat family
protein contains G-protein beta WD-40 repeats
Length = 539
Score = 37.1 bits (82), Expect = 0.015
Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 12/135 (8%)
Frame = +1
Query: 283 IGTFEGHKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHTFEHEHIVKSVNFNAD 462
I T GH AV V L +A L + D ++WD G + + + ++ A
Sbjct: 155 IDTLYGHTEAVRTVFLLASAKLVFTSGYDSIVRMWDMEEG--LSIAASKPLGCTIRALAA 212
Query: 463 DTLLVTA-----------SNEKLIRVFDLNKLEAGPIE-KINGHTSSIRHAVFLNNSRIV 606
DT L+ A S + L +FDL + E ++ GH I ++ L+ + I
Sbjct: 213 DTKLLVAGGTDGFIHCWKSLDGLRNLFDLTGFQKEKTEFRLWGHEGPIT-SLALDMTSIF 271
Query: 607 SVSDDNTMRVWDRNS 651
S S D ++R+WDR+S
Sbjct: 272 SGSWDMSVRIWDRSS 286
>At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 WD
repeats (PF00400); similar to Fzr1 (GI:6463679) {Homo
sapiens}; similar to WD repeat protein Srw1
-Schizosaccharomyces pombe,PID:d1023012
Length = 475
Score = 37.1 bits (82), Expect = 0.015
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 1/105 (0%)
Frame = +1
Query: 352 ASGAADFTAKLWDARYGDMVHTFEHEHIVKSVNFNADDTLLVTASNEKLIRVFDLNKLEA 531
A G + T ++WD + T E H ++ ++L + S +K I D+ E
Sbjct: 225 AIGTSSGTVQIWDVLRCKNIRTMEG-HRLRVGALAWSSSVLSSGSRDKSILQRDIRTQE- 282
Query: 532 GPIEKINGHTSSIRHAVFLNNSR-IVSVSDDNTMRVWDRNSGEEV 663
+ K+ GH S I + +++R + S +DN + VW+++S + V
Sbjct: 283 DHVSKLKGHKSEICGLKWSSDNRELASGGNDNKLFVWNQHSTQPV 327
Score = 28.3 bits (60), Expect = 6.9
Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Frame = +1
Query: 223 LISACKDGKPMLRQGETG-DWIGTFEGHKGAVWGVALTQNANLAASGAADFTAKLWDARY 399
L S +D + R T D + +GHK + G+ + + ASG D +W+
Sbjct: 264 LSSGSRDKSILQRDIRTQEDHVSKLKGHKSEICGLKWSSDNRELASGGNDNKLFVWNQHS 323
Query: 400 GDMVHTF-EHEHIVKSV 447
V F EH VK++
Sbjct: 324 TQPVLRFCEHAAAVKAI 340
>At4g00090.1 68417.m00009 transducin family protein / WD-40 repeat
family protein similar to Transducin beta-like 2 protein
(WS beta-transducin repeats protein) (WS-betaTRP)
(Williams-Beuren syndrome chromosome region 13 protein)
(SP:Q9Y4P3) {Homo sapiens}
Length = 430
Score = 37.1 bits (82), Expect = 0.015
Identities = 28/115 (24%), Positives = 55/115 (47%), Gaps = 10/115 (8%)
Frame = +1
Query: 205 TKDGYYLISACKDGKPM-LRQGETGDWIGTFEGHKGAVWGVALTQNANLAASGAADFTAK 381
T DG +I++C +G + L G+TG +G + ++ A++ N A+ A K
Sbjct: 205 TADGSVVIASCSEGTDIVLWHGKTGRNLGHVDTNQLKNHMAAVSPNGRFLAAAAFTADVK 264
Query: 382 LWDARY---------GDMVHTFEHEHIVKSVNFNADDTLLVTASNEKLIRVFDLN 519
+W+ Y ++ H+ V + F+ + ++TAS + IRV+++N
Sbjct: 265 VWEIVYQKDGSVKEVSRVMQLKGHKSAVTWLCFSPNSEQIITASKDGSIRVWNIN 319
>At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similiar to rab11 binding
protein (GI:4512103) [Bos taurus]
Length = 903
Score = 37.1 bits (82), Expect = 0.015
Identities = 30/133 (22%), Positives = 60/133 (45%), Gaps = 17/133 (12%)
Frame = +1
Query: 295 EGHKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHTFEHE--HIVKSVNFNADDT 468
+ H+GAVW + +Q+A+ ASG AD +W+ + +++ E I S+ ++ +
Sbjct: 401 QAHEGAVWTIKFSQDAHYLASGGADRVIHVWEVQECELMSMNEGSLTPIHPSLCDSSGNE 460
Query: 469 LLVTASNEK--------------LIRVFD-LNKLEAGPIEKINGHTSSIRHAVFLNNSRI 603
+ V +K + V + + P+ + GH +I + + +
Sbjct: 461 ITVVEKKKKGKGSSGRRHNHIPDYVHVPETVFSFSDKPVCSLKGHLDAILDLSWSKSQLL 520
Query: 604 VSVSDDNTMRVWD 642
+S S D T+R+WD
Sbjct: 521 LSSSMDKTVRLWD 533
Score = 33.9 bits (74), Expect = 0.14
Identities = 18/77 (23%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +1
Query: 289 TFEGHKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHTFEHEHIVKSVNFN-ADD 465
+ +GH A+ ++ +++ L S + D T +LWD + F H V + F+ D+
Sbjct: 501 SLKGHLDAILDLSWSKS-QLLLSSSMDKTVRLWDIETKTCLKLFAHNDYVTCIQFSPVDE 559
Query: 466 TLLVTASNEKLIRVFDL 516
++ S + IR++ +
Sbjct: 560 NYFLSGSLDAKIRIWSI 576
>At1g27840.1 68414.m03412 transducin family protein / WD-40 repeat
family protein contains similarity to cockayne syndrome
complementation group A protein GB:U28413 GI:975301 from
[Homo sapiens]; confirmed by cDNA gi:1598289
Length = 450
Score = 37.1 bits (82), Expect = 0.015
Identities = 32/130 (24%), Positives = 52/130 (40%), Gaps = 5/130 (3%)
Frame = +1
Query: 301 HKGAVWGVALTQNANLAASGAADFTAKLWDARYG-DMVHTFEHEHIV--KSVNFN-ADDT 468
H GAV G+ T + S +D +LWD G + + FE I K + + +DD
Sbjct: 311 HYGAVTGLKATNDGMYLLSAGSDSRIRLWDIESGRNTLVNFETGRIQTNKGIQLDTSDDP 370
Query: 469 LLVTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVF-LNNSRIVSVSDDNTMRVWDR 645
LV K ++ F + + GH S+ F N+ + + D + VW
Sbjct: 371 ALVFVPCMKTVKAFGM--WSGRTTLMLRGHYESVNTCCFNSNDQELYTSGSDRQILVWSP 428
Query: 646 NSGEEVQKVE 675
E + V+
Sbjct: 429 GGTVEDEMVQ 438
>At1g24530.1 68414.m03088 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 7 WD-40 repeats (PF00400)
Length = 418
Score = 37.1 bits (82), Expect = 0.015
Identities = 31/131 (23%), Positives = 62/131 (47%), Gaps = 12/131 (9%)
Frame = +1
Query: 283 IGTFEGHKGAVWGVALTQNANLAASGAADFTAKLWD----ARYGDMVHTFE-HEHIVKSV 447
+ T E HK AV +AL + ++ SG+ D + +W+ + Y + H+ + S+
Sbjct: 273 VATLEKHKSAVNALALNDDGSVLFSGSCDRSILVWEREDTSNYMAVRGALRGHDKAILSL 332
Query: 448 NFNADDTLLVTASNEKLIRVFDLNKLEA-GPIEKINGHTSSIRHAVFLNNSR------IV 606
FN D LL++ S ++ +R++ + +E ++GHT ++ + I+
Sbjct: 333 -FNVSD-LLLSGSADRTVRIWRRGPDSSYSCLEVLSGHTKPVKSLAAVREKELDDVVSII 390
Query: 607 SVSDDNTMRVW 639
S S D ++ W
Sbjct: 391 SGSLDGEVKCW 401
Score = 36.7 bits (81), Expect = 0.020
Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 5/105 (4%)
Frame = +1
Query: 427 EHIVKSVNFNADDTLLVTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVFLNNSRIV 606
EH D + + S +K ++++ + L E I H ++ N +
Sbjct: 193 EHADAVTALAVSDGFIYSVSWDKTLKIWRASDLRCK--ESIKAHDDAVNAIAVSTNGTVY 250
Query: 607 SVSDDNTMRVWDRNSGEE----VQKVE-FQSVPNSLXLSRDGAIL 726
+ S D +RVW + +GE+ V +E +S N+L L+ DG++L
Sbjct: 251 TGSADRRIRVWAKPTGEKRHTLVATLEKHKSAVNALALNDDGSVL 295
>At3g50390.1 68416.m05512 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to myosin heavy chain kinase B (gb:U90946)
[Dictyostelium discoideum]
Length = 469
Score = 36.7 bits (81), Expect = 0.020
Identities = 25/106 (23%), Positives = 49/106 (46%)
Frame = +1
Query: 418 FEHEHIVKSVNFNADDTLLVTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVFLNNS 597
F H + + + D LL + S +K +V+ ++ L +E +N H ++ V +
Sbjct: 208 FRHLDAISCLALSEDKRLLYSGSWDKTFKVWRVSDLRC--VESVNAHEDAVNAVVSGFDG 265
Query: 598 RIVSVSDDNTMRVWDRNSGEEVQKVEFQSVPNSLXLSRDGAILTVA 735
+ + S D T++VW R E Q + + + L +D A+ +A
Sbjct: 266 LVFTGSADGTVKVWRR----EDQAKDTKHFFSETLLKQDCAVTAIA 307
Score = 29.5 bits (63), Expect = 3.0
Identities = 24/85 (28%), Positives = 38/85 (44%)
Frame = +1
Query: 469 LLVTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVFLNNSRIVSVSDDNTMRVWDRN 648
LL T S+ K IRV+ N +E + +G + A+ L +I + D +RVW
Sbjct: 110 LLYTGSDSKNIRVWK-NHVEFSSFKSNSG----LVKAIVLAGDKIFTGHQDGKIRVWKAA 164
Query: 649 SGEEVQKVEFQSVPNSLXLSRDGAI 723
S E ++PN L R+ +
Sbjct: 165 SKESNVHRRVGTMPNLLDYIRNSIV 189
>At2g40360.1 68415.m04977 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to block of proliferation protein Bop1
(GI:1679772) [Mus musculus]
Length = 753
Score = 36.7 bits (81), Expect = 0.020
Identities = 16/64 (25%), Positives = 32/64 (50%)
Frame = +1
Query: 292 FEGHKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHTFEHEHIVKSVNFNADDTL 471
++GH GAV ++ + ASG+ D + ++W+ G + ++ + + V +N L
Sbjct: 419 YKGHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGRCLKVWQFDEAIMCVAWNPLSRL 478
Query: 472 LVTA 483
V A
Sbjct: 479 PVLA 482
>At2g19430.1 68415.m02267 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; contains 7 Trp-Asp WD-40
repeats
Length = 367
Score = 36.7 bits (81), Expect = 0.020
Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 7/100 (7%)
Frame = +1
Query: 523 LEAGPIEK-INGHTSSIRHAVFLNN-SRIVSVSDDNTMRVWDRNSGEEVQKVEFQSVPNS 696
+E+G I+ GH+ + V ++ S+I++ S+D T R+WD +G+ V+ + Q +
Sbjct: 188 VESGKIKMTFKGHSDYLHTVVSRSSASQILTGSEDGTARIWDCKTGKCVKVIGSQDKKSR 247
Query: 697 LXLSR---DG--AILTVAHGTNVSFYTSDTMRKLREFPVP 801
L +S DG + L G N++ + ++ P+P
Sbjct: 248 LRVSSMALDGSESWLVCGQGKNLALWNLPASECVQTIPIP 287
Score = 35.9 bits (79), Expect = 0.035
Identities = 36/167 (21%), Positives = 67/167 (40%), Gaps = 5/167 (2%)
Frame = +1
Query: 163 GHTRPVVHLDFSDVTKDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALTQNA 342
G P+ ++ V + +A D E+G TF+GH + V +A
Sbjct: 154 GALSPMPEINAMSVDPQSGSVFTAAGDSCAYCWDVESGKIKMTFKGHSDYLHTVVSRSSA 213
Query: 343 NLAASGAADFTAKLWDARYGDMVHTFEHEH-----IVKSVNFNADDTLLVTASNEKLIRV 507
+ +G+ D TA++WD + G V + V S+ + ++ LV + L +
Sbjct: 214 SQILTGSEDGTARIWDCKTGKCVKVIGSQDKKSRLRVSSMALDGSESWLVCGQGKNL-AL 272
Query: 508 FDLNKLEAGPIEKINGHTSSIRHAVFLNNSRIVSVSDDNTMRVWDRN 648
++L E I H V + +I++V + +R +D N
Sbjct: 273 WNLPASECVQTIPIPAHVQD----VMFDEKQILTVGAEPLLRRFDLN 315
>At4g38480.1 68417.m05438 transducin family protein / WD-40 repeat
family protein contains contains Pfam PF00400: WD
domain, G-beta repeat (7 copies, 3 weak);similar to gene
PC326 protein - mouse, PIR2:S37694
Length = 471
Score = 35.9 bits (79), Expect = 0.035
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Frame = +1
Query: 301 HKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHTFEHEHI-----VKSVNFNADD 465
HKG V V+ + ++ SG+ D LWD + + +F+ H K + F +DD
Sbjct: 54 HKGCVNTVSFNADGDILLSGSDDRQVILWDWQTASVKLSFDSGHFNNIFQAKFMPF-SDD 112
Query: 466 TLLVTASNEKLIRVFDLNKLEAGPIE 543
+VT++ +K +R + LE+G +E
Sbjct: 113 RTIVTSAADKQVRYSKI--LESGQVE 136
>At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to fizzy-related
protein (GI:5813825) Drosophila melanogaster,
PID:g2326419;
Length = 518
Score = 35.9 bits (79), Expect = 0.035
Identities = 29/125 (23%), Positives = 55/125 (44%), Gaps = 1/125 (0%)
Frame = +1
Query: 298 GHKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHTFEHEHIVKSVNFNADDTLLV 477
G + +V V A G + ++WDA T E H ++ ++L
Sbjct: 250 GAEDSVCSVGWALRGTHLAVGTSTGKVQIWDASRCKRTRTMEG-HRLRVGALAWGSSVLS 308
Query: 478 TASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVF-LNNSRIVSVSDDNTMRVWDRNSG 654
+ S +K I D+ + + + K+ GH S + + +N + S +DN + VW+++S
Sbjct: 309 SGSRDKSILQRDI-RCQEDHVSKLAGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHST 367
Query: 655 EEVQK 669
+ V K
Sbjct: 368 QPVLK 372
>At4g28450.1 68417.m04071 transducin family protein / WD-40 repeat
family protein SOF1 (involved in rRNA processing)
protein-yeast
Length = 442
Score = 35.5 bits (78), Expect = 0.046
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = +1
Query: 223 LISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALTQNANLAASGAADFTAKLWD 390
+ SA DG L + + F GH+GAV G+ + + N+ S D T +LW+
Sbjct: 72 IFSASMDGDIRLWDISSRRTVCQFPGHQGAVRGLTASTDGNVLVSCGTDCTVRLWN 127
Score = 33.5 bits (73), Expect = 0.18
Identities = 28/113 (24%), Positives = 51/113 (45%), Gaps = 6/113 (5%)
Frame = +1
Query: 343 NLAASGAADFTAKLWDARYGDMVHTFEHEHI--VKSVNFNADDTLLVTASNEKLIRVFDL 516
NL A+ D + +D R D +H+ V ++F+ VT S ++ +R+F
Sbjct: 250 NLTAANE-DGSCYSFDGRKLDEAKCVHKDHVSAVMDIDFSPTGREFVTGSYDRSVRIFPY 308
Query: 517 NKLEAGPIEKINGHTSSIRHAVFLNNS----RIVSVSDDNTMRVWDRNSGEEV 663
N G +I HT ++ + S ++S SDD +R+W + E++
Sbjct: 309 N---GGHSREIY-HTKRMQRVFCVKYSCDATYVISGSDDTNLRLWKAKASEQL 357
>At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2
WD-40 repeats (PF0400);similar to guanine
nucleotide-binding protein beta subunit GPBA (SP:P36408)
[Dictyostelium discoideum (Slime mold)]; similar to
katanin p80 (WD40-containing) subunit B 1 (GI:12655011)
[Homo sapiens]
Length = 418
Score = 35.5 bits (78), Expect = 0.046
Identities = 23/108 (21%), Positives = 42/108 (38%), Gaps = 2/108 (1%)
Frame = +1
Query: 196 SDVTKDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALTQNANLAASGAADFT 375
+ V+ DG L + ++ +G I + GHK + A N + A+G D
Sbjct: 254 TSVSPDGKLLAVVGDSTECLISDSHSGKVISSLRGHKDYSFASAWHPNGLILATGNQDTA 313
Query: 376 AKLWDARYGDMVHTFEHEHI--VKSVNFNADDTLLVTASNEKLIRVFD 513
+LWD R ++ ++ + F + L A + +FD
Sbjct: 314 CRLWDIRNPSESFAVLKGNMGAIRGLKFTPEGRFLAMAEPADFVHIFD 361
>At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2
protein (ZFWD2), putative 99.8% identical to zfwd2
protein (GI:12057166) [Arabidopsis thaliana]; contains 6
copies (2 weak) Pfam PF00400: WD domain, G-beta repeat;
contains Pfam PF00642: Zinc finger C-x8-C-x5-C-x3-H type
(and similar) domain
Length = 437
Score = 35.1 bits (77), Expect = 0.060
Identities = 31/131 (23%), Positives = 58/131 (44%), Gaps = 5/131 (3%)
Frame = +1
Query: 289 TFEGHKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHTFEHE-----HIVKSVNF 453
+ G G V+ +L +L +G D + W RY + FE H + V
Sbjct: 225 SLSGPVGQVY--SLVVGTDLLFAGTQDGSILAW--RYNAATNCFEPSASLTGHTLAVVTL 280
Query: 454 NADDTLLVTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVFLNNSRIVSVSDDNTMR 633
L + S +K I+V+ L+ L+ I+ + H+S + + + ++S S DNT++
Sbjct: 281 YVGANRLYSGSMDKTIKVWSLDNLQC--IQTLTDHSSVVMSLICWDQF-LLSCSLDNTVK 337
Query: 634 VWDRNSGEEVQ 666
+W G ++
Sbjct: 338 IWAAIEGGNLE 348
Score = 32.3 bits (70), Expect = 0.42
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +1
Query: 262 QGETGDWIGTFEGHKGAVWGVALTQNANLAASGAADFTAKLWDARYG 402
+GE+ + +GH+ V G+AL ++ +G+ D T ++WD G
Sbjct: 137 KGESFALLTQLDGHEKLVSGIALPSGSDKLYTGSKDETLRVWDCASG 183
Score = 31.5 bits (68), Expect = 0.74
Identities = 37/153 (24%), Positives = 67/153 (43%), Gaps = 9/153 (5%)
Frame = +1
Query: 298 GHKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHTF-EHEHIVKSVNFNADDTLL 474
GH AV V L AN SG+ D T K+W + T +H +V S+ D L
Sbjct: 272 GHTLAV--VTLYVGANRLYSGSMDKTIKVWSLDNLQCIQTLTDHSSVVMSLI--CWDQFL 327
Query: 475 VTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVF----LNNSR----IVSVSDDNTM 630
++ S + ++++ +E G +E H H V ++++ ++ +DNT+
Sbjct: 328 LSCSLDNTVKIWAA--IEGGNLEVTYTHKEE--HGVLALCGVHDAEAKPVLLCACNDNTL 383
Query: 631 RVWDRNSGEEVQKVEFQSVPNSLXLSRDGAILT 729
R++D S E K+ + ++ + G T
Sbjct: 384 RLYDLPSFTERGKIFAKQEIRAIQIGPGGIFFT 416
>At4g21130.1 68417.m03055 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); some
similarity to a group of proteins with homology to
mammalian apoptosis regulators identified in zebrafish
(PUBMED:10917738)Apaf-1(gi:7677507)
Length = 537
Score = 35.1 bits (77), Expect = 0.060
Identities = 23/118 (19%), Positives = 54/118 (45%), Gaps = 2/118 (1%)
Frame = +1
Query: 292 FEGHKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHT-FEHEHIVKSVNFNADDT 468
F GH G V + + SG+ D T +W+A + + + F H+ + S++ +
Sbjct: 259 FTGHCGIVSSLCFREGTAELFSGSYDGTLSIWNAEHRTYIESCFGHQSELLSIDALGRER 318
Query: 469 LLVTASNEKLIRVFDLNKLEAGPIEKI-NGHTSSIRHAVFLNNSRIVSVSDDNTMRVW 639
+L + ++ ++++ + + I S+ F+N+ +S SD+ ++ +W
Sbjct: 319 VL-SVGRDRTMQLYKVGIVVPESTRLIYRASESNFECCCFVNSDEFLSGSDNGSIALW 375
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 35.1 bits (77), Expect = 0.060
Identities = 21/91 (23%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Frame = +1
Query: 289 TFEGHKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHTFE-HEHIVKSVNFNADD 465
T GH V + + + ++ ASG+ D T +W+ R G H +VK V ++
Sbjct: 113 TLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGVTWDPIG 172
Query: 466 TLLVTASNEKLIRVFDLNKLEAGPIEKINGH 558
+ + + S++K + ++ + + G + +GH
Sbjct: 173 SFIASQSDDKTVIIWRTS--DWGMAHRTDGH 201
Score = 32.7 bits (71), Expect = 0.32
Identities = 29/99 (29%), Positives = 38/99 (38%)
Frame = +1
Query: 151 LTCGGHTRPVVHLDFSDVTKDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVAL 330
+T GHT VV L++S D L S D + TG GH V GV
Sbjct: 112 MTLRGHTADVVDLNWSP---DDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGVTW 168
Query: 331 TQNANLAASGAADFTAKLWDARYGDMVHTFEHEHIVKSV 447
+ AS + D T +W M H + H KS+
Sbjct: 169 DPIGSFIASQSDDKTVIIWRTSDWGMAHRTD-GHWAKSL 206
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein,
carrot,(gi:2253631) PIR:T14352
Length = 428
Score = 34.7 bits (76), Expect = 0.080
Identities = 30/123 (24%), Positives = 54/123 (43%), Gaps = 3/123 (2%)
Frame = +1
Query: 289 TFEGHKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHTFE--HEHIVKSVNFNAD 462
T + G V + TQ+ A G + ++WD V T HE V S+ +N
Sbjct: 147 TIDDENGPVTSINWTQDGLDLAVGLDNSEVQVWDCVSNRHVRTLRGGHESRVGSLAWN-- 204
Query: 463 DTLLVTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVFLNNSR-IVSVSDDNTMRVW 639
+ +L T + I D+ ++ + I GHT + + + + + S +DN + +W
Sbjct: 205 NHILTTGGMDGKIVNNDV-RIRSSIIGTYVGHTEEVCGLKWSESGKKLASGGNDNVVHIW 263
Query: 640 DRN 648
DR+
Sbjct: 264 DRS 266
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 283 IGTFEGHKGAVWGVALTQNANLAASGAADFTAKLWD 390
IGT+ GH V G+ +++ ASG D +WD
Sbjct: 229 IGTYVGHTEEVCGLKWSESGKKLASGGNDNVVHIWD 264
>At4g35140.1 68417.m04996 transducin family protein / WD-40 repeat
family protein contains 6 (3 significant) WD-40 repeats;
similar to PC326 protein (GI:200241) (PIR2:S37694)
[Mus musculus]; Human (H326) mRNA, Homo sapiens,
gb:U06631
Length = 496
Score = 34.7 bits (76), Expect = 0.080
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Frame = +1
Query: 295 EGHKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHTFE--HEHIVKSVNFN--AD 462
E HKG V V+ ++ SG+ D LWD + G++ +F H + V F +D
Sbjct: 56 EKHKGCVNTVSFNAEGDVLISGSDDRRVVLWDWQLGNVKLSFHSGHANNVFQAKFMPFSD 115
Query: 463 DTLLVTASNEKLIR 504
D +VT + + ++R
Sbjct: 116 DRTIVTCAADGMVR 129
>At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 447
Score = 34.7 bits (76), Expect = 0.080
Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 2/89 (2%)
Frame = +1
Query: 253 MLRQGETGDWIGTFEGHKGAVWGVALTQNANLAASGAADFTAKLWDAR-YGDMVHTFE-H 426
+L +G I EGH + A N + A+G D T +LWD R + + +
Sbjct: 302 LLADTGSGKVIHGLEGHLDYSFSSAWHPNGQILATGNQDTTCRLWDVRNLSQSLKVLKGN 361
Query: 427 EHIVKSVNFNADDTLLVTASNEKLIRVFD 513
++++ F +D L A + +FD
Sbjct: 362 MGAIRALRFTSDGRFLAMAEPADFVHLFD 390
>At5g58760.1 68418.m07360 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
damage-specific DNA binding protein 2 (GI:10798819)
[Homo sapiens]
Length = 557
Score = 34.3 bits (75), Expect = 0.11
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +1
Query: 469 LLVTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVFLNNS--RIVSVSDDNTMRVWD 642
LL++ N+ R++D+ KL+ H + A F +S +I++ DN +R+WD
Sbjct: 327 LLLSCGNDHFARIWDMRKLQPKASLHDLAHKRVVNSAYFSPSSGTKILTTCQDNRIRIWD 386
>At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1135
Score = 34.3 bits (75), Expect = 0.11
Identities = 40/172 (23%), Positives = 78/172 (45%), Gaps = 13/172 (7%)
Frame = +1
Query: 271 TGDWIGTFEGHKGAVWGVALTQNANL--AASGAADFTAKLWDARYGDMVHTFEHE---HI 435
TG+ + TFEGH+ V+ V Q N+ S A D K W Y +M +++
Sbjct: 497 TGNKLHTFEGHEAPVYSVCPHQKENIQFIFSTAVDGKIKAW--LYDNMGSRVDYDAPGRS 554
Query: 436 VKSVNFNADDTLLVTASNEKLIRVFDLNKLEA-GPIEK----INGHTSSIRHAVFLNNSR 600
S+ + AD T L + K F + E+ G +++ + + + + N
Sbjct: 555 CTSMAYCADGTRLFSCGTSKEGESFIVEWNESEGAVKRTYLGLGKRSVGVVQFDTMKNKF 614
Query: 601 IVSVSDDNTMRVWDRNSGEEVQKVEFQ-SVPNS--LXLSRDGAILTVAHGTN 747
+V+ D+ ++ WD +S + + + +P+S L ++++G +L V+ N
Sbjct: 615 LVA-GDEFQVKFWDMDSVDLLSSTAAEGGLPSSPCLRINKEGTLLAVSTTDN 665
Score = 33.9 bits (74), Expect = 0.14
Identities = 23/54 (42%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Frame = +1
Query: 295 EGHKGAVWGVALTQ-NANLAA-SGAADFTAKLWDARYGDMVHTFE-HEHIVKSV 447
+ H G V +A +Q N L + D T K+WDA G+ +HTFE HE V SV
Sbjct: 461 DAHAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSV 514
>At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1137
Score = 34.3 bits (75), Expect = 0.11
Identities = 40/172 (23%), Positives = 78/172 (45%), Gaps = 13/172 (7%)
Frame = +1
Query: 271 TGDWIGTFEGHKGAVWGVALTQNANL--AASGAADFTAKLWDARYGDMVHTFEHE---HI 435
TG+ + TFEGH+ V+ V Q N+ S A D K W Y +M +++
Sbjct: 497 TGNKLHTFEGHEAPVYSVCPHQKENIQFIFSTAVDGKIKAW--LYDNMGSRVDYDAPGRS 554
Query: 436 VKSVNFNADDTLLVTASNEKLIRVFDLNKLEA-GPIEK----INGHTSSIRHAVFLNNSR 600
S+ + AD T L + K F + E+ G +++ + + + + N
Sbjct: 555 CTSMAYCADGTRLFSCGTSKEGESFIVEWNESEGAVKRTYLGLGKRSVGVVQFDTMKNKF 614
Query: 601 IVSVSDDNTMRVWDRNSGEEVQKVEFQ-SVPNS--LXLSRDGAILTVAHGTN 747
+V+ D+ ++ WD +S + + + +P+S L ++++G +L V+ N
Sbjct: 615 LVA-GDEFQVKFWDMDSVDLLSSTAAEGGLPSSPCLRINKEGTLLAVSTTDN 665
Score = 33.9 bits (74), Expect = 0.14
Identities = 23/54 (42%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Frame = +1
Query: 295 EGHKGAVWGVALTQ-NANLAA-SGAADFTAKLWDARYGDMVHTFE-HEHIVKSV 447
+ H G V +A +Q N L + D T K+WDA G+ +HTFE HE V SV
Sbjct: 461 DAHAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSV 514
>At1g03110.1 68414.m00288 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat domain 4 protein (GI:9955698) [Mus
musculus]
Length = 427
Score = 34.3 bits (75), Expect = 0.11
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Frame = +1
Query: 433 IVKSVNFNADDTLLVTASNEKLIRV--FDLNKLE-AGPIEKIN-GHTSSIRHAVF----- 585
I+ S+ F+ D +++A + IRV F LE A I+ GH+ I F
Sbjct: 157 IITSLEFSPDGRYILSADRDFKIRVTVFPKKPLEGAHEIQSFCLGHSEFITCTAFVSTPE 216
Query: 586 LNNSRIVSVSDDNTMRVWDRNSGEEVQKVEFQSV 687
L ++S S D+T+R+WD SG + E +V
Sbjct: 217 LTQGYLMSGSGDSTVRLWDITSGSLLDTCEVSTV 250
Score = 27.9 bits (59), Expect = 9.1
Identities = 17/77 (22%), Positives = 35/77 (45%)
Frame = +1
Query: 304 KGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHTFEHEHIVKSVNFNADDTLLVTA 483
K ++ + + + L S D K+W A ++T E V +V ++DD+ + A
Sbjct: 63 KESIRAIRYSTSGKLFVSAGDDKLVKIWSADSWRCLNTVCSEKRVSAVAISSDDSHVCYA 122
Query: 484 SNEKLIRVFDLNKLEAG 534
++ V +L+ + G
Sbjct: 123 DKFGVVWVIELDGINDG 139
>At4g29380.1 68417.m04197 protein kinase family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat; contains Pfam PF00069: Protein kinase domain;
contains PF02985: HEAT repeat; similar to adaptor protein
(GI:1817584) [Homo sapiens]; similar to VPS15 protein
(GI:6103009) [Pichia pastoris]
Length = 1494
Score = 33.9 bits (74), Expect = 0.14
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +1
Query: 385 WDARYGDMVHTFEHEHIVKSVNFNADDTLLVTASNEKLIRVFDLNKLE 528
W R + H EH V + ++D + V+AS++ ++V+D KLE
Sbjct: 1067 WKPRGVLVAHLQEHRSAVNDIATSSDHSFFVSASDDSTVKVWDSRKLE 1114
Score = 29.9 bits (64), Expect = 2.3
Identities = 23/104 (22%), Positives = 48/104 (46%), Gaps = 10/104 (9%)
Frame = +1
Query: 274 GDWIGTFEGHKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHTFEHE---HIVKS 444
G + + H+ AV +A + + + S + D T K+WD+R + +F H+ S
Sbjct: 1071 GVLVAHLQEHRSAVNDIATSSDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGS 1130
Query: 445 ----VNFNADDTLLVTASNEKLIRVFDLNKLEAG---PIEKING 555
+ T +V +++ +I +F ++ + G +EK +G
Sbjct: 1131 RGMCTTMLRNSTQVVVGASDGVIHMFSIDHISRGLGNVVEKYSG 1174
Score = 29.5 bits (63), Expect = 3.0
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +1
Query: 538 IEKINGHTSSIRH-AVFLNNSRIVSVSDDNTMRVWDRNSGEEVQKVEFQS-VPNSLXLSR 711
+ + H S++ A ++S VS SDD+T++VWD E + + F+S + L SR
Sbjct: 1074 VAHLQEHRSAVNDIATSSDHSFFVSASDDSTVKVWDSRKLE--KDISFRSRLTYHLEGSR 1131
Query: 712 DGAILTVAHGTNVSFYTSD 768
+ + T V SD
Sbjct: 1132 GMCTTMLRNSTQVVVGASD 1150
>At4g35370.1 68417.m05025 transducin family protein / WD-40 repeat
family protein contains 4 (3 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 414
Score = 33.5 bits (73), Expect = 0.18
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = +1
Query: 334 QNANLAASGAADFTAKLWDARYGDMVHTFE-HEHIVKSVNF-NADDTLLVTASNEKLIRV 507
+N N+ ASG+ D K+WD G T E HE V +V + N +L++ S ++ + +
Sbjct: 225 ENRNIVASGSEDKKVKVWDVATGKCKVTMEHHEKKVHAVAWNNYTPEVLLSGSRDRTVVL 284
Query: 508 FD 513
D
Sbjct: 285 KD 286
>At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1
protein (ZFWD1) identical to zfwd1 protein (GI:12057164)
[Arabidopsis thaliana]
Length = 430
Score = 33.5 bits (73), Expect = 0.18
Identities = 29/131 (22%), Positives = 58/131 (44%), Gaps = 5/131 (3%)
Frame = +1
Query: 289 TFEGHKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHTFEHE-----HIVKSVNF 453
+ G G V+ +L +L +G D + +W RY F+ H + V+
Sbjct: 218 SLNGPVGQVY--SLVVGTDLLFAGTQDGSILVW--RYNSTTSCFDPAASLLGHTLAVVSL 273
Query: 454 NADDTLLVTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVFLNNSRIVSVSDDNTMR 633
L + + + I+V+ L+ L+ I+ + HTS + + + ++S S DNT++
Sbjct: 274 YVGANRLYSGAMDNSIKVWSLDNLQC--IQTLTEHTSVVMSLICWDQF-LLSCSLDNTVK 330
Query: 634 VWDRNSGEEVQ 666
+W G ++
Sbjct: 331 IWAATEGGNLE 341
Score = 31.5 bits (68), Expect = 0.74
Identities = 25/130 (19%), Positives = 57/130 (43%)
Frame = +1
Query: 262 QGETGDWIGTFEGHKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHTFEHEHIVK 441
+G++ + +GH+ V G+AL ++ + + D T ++WD G V
Sbjct: 130 KGDSFSLLTQLDGHQKVVTGIALPSGSDKLYTASKDETVRIWDCASGQCTGVLNLGGEVG 189
Query: 442 SVNFNADDTLLVTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVFLNNSRIVSVSDD 621
+ + LLV N L++ ++ ++ +NG + +++ + + + + D
Sbjct: 190 CI-ISEGPWLLVGMPN--LVKAWN---IQNNADLSLNGPVGQV-YSLVVGTDLLFAGTQD 242
Query: 622 NTMRVWDRNS 651
++ VW NS
Sbjct: 243 GSILVWRYNS 252
>At2g46560.1 68415.m05808 transducin family protein / WD-40 repeat
family protein similar to CPY (GI:3096961) {Chironomus
thummi}; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies, 3 weak)|9780477|gb|BE522499.1|BE522499
Length = 2471
Score = 33.5 bits (73), Expect = 0.18
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +1
Query: 295 EGHKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHTFEHEH 432
+ H G+V +A +L +G+ D KLWDA+ ++H + H
Sbjct: 2372 KAHLGSVTKIATIPRTSLFLTGSKDGEVKLWDAKAAKLIHHWPKLH 2417
>At3g42660.1 68416.m04436 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400); AND-1
protein - Homo sapiens, EMBL:AJ006266
Length = 951
Score = 33.1 bits (72), Expect = 0.24
Identities = 29/146 (19%), Positives = 60/146 (41%), Gaps = 10/146 (6%)
Frame = +1
Query: 274 GDWIGTFEGHKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHTFE--------HE 429
G + +GHKG V G+ N L AS T W+ + G + T + +
Sbjct: 136 GSIVRVLKGHKGPVTGLDFHPNGELLASIDTTGTVLCWELQNGVVSFTLKGVAPDTGFNT 195
Query: 430 HIVKSVNFNADDTLLVTASNEKLIRVFDLNKLEAGPIEKING-HTSSIRHAVFLNNSRIV 606
IV ++ D L + ++D + + + G H +I + + N + +
Sbjct: 196 SIVNIPRWSPDGRTLAVPGLRNDVVMYD--RFTGEKLFALRGDHLEAICYLTWAPNGKYI 253
Query: 607 SVSD-DNTMRVWDRNSGEEVQKVEFQ 681
+ S D + +WD + +++ + +F+
Sbjct: 254 ATSGLDKQVLLWDVDKKQDIDRHKFE 279
>At5g50650.1 68418.m06276 WD-40 repeat family protein / St12p
protein, putative contains 4 WD-40 repeats (PF0400);
similar to St12p protein GI:166878 [Arabidopsis
thaliana]
Length = 383
Score = 32.7 bits (71), Expect = 0.32
Identities = 18/74 (24%), Positives = 37/74 (50%)
Frame = +1
Query: 442 SVNFNADDTLLVTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVFLNNSRIVSVSDD 621
S++FN D T+L T + + +RVF+ ++ + + H +S++ F + + +
Sbjct: 147 SLSFNQDGTVLATGAEDGTLRVFEWPSMKT-LLNESKTH-ASVKSLTFSESGKFLVSLGA 204
Query: 622 NTMRVWDRNSGEEV 663
RVWD N+ +
Sbjct: 205 PLCRVWDVNASAAI 218
>At5g50550.1 68418.m06260 WD-40 repeat family protein / St12p
protein, putative contains 4 WD-40 repeats (PF0400);
similar to St12p protein GI:166878 [Arabidopsis
thaliana]
Length = 383
Score = 32.7 bits (71), Expect = 0.32
Identities = 18/74 (24%), Positives = 37/74 (50%)
Frame = +1
Query: 442 SVNFNADDTLLVTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVFLNNSRIVSVSDD 621
S++FN D T+L T + + +RVF+ ++ + + H +S++ F + + +
Sbjct: 147 SLSFNQDGTVLATGAEDGTLRVFEWPSMKT-LLNESKTH-ASVKSLTFSESGKFLVSLGA 204
Query: 622 NTMRVWDRNSGEEV 663
RVWD N+ +
Sbjct: 205 PLCRVWDVNASAAI 218
>At4g18905.1 68417.m02787 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 494
Score = 32.7 bits (71), Expect = 0.32
Identities = 30/118 (25%), Positives = 55/118 (46%), Gaps = 4/118 (3%)
Frame = +1
Query: 301 HKGAVWGVALTQN-ANLAASGAADFTAKLWDARYGDMVHTFEHE-HIVKSVNFN--ADDT 468
H +V G+A + N+ AS +AD K+WD G T EH V++V +N A +
Sbjct: 264 HTESVLGLAWNKEFRNILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPEV 323
Query: 469 LLVTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVFLNNSRIVSVSDDNTMRVWD 642
LL + ++ ++ +G + S+ +S +VS+ +D T++ +D
Sbjct: 324 LLSGSFDQTVVMKDGRQPSHSGFKWSVMSDVESLAWDPHCEHSFVVSL-EDGTVKGFD 380
>At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies, 1
significant); similar to Trp-Asp repeat protein
(PIR:T40094) [Schizosaccharomyces]
Length = 447
Score = 32.7 bits (71), Expect = 0.32
Identities = 21/113 (18%), Positives = 49/113 (43%), Gaps = 2/113 (1%)
Frame = +1
Query: 187 LDFSDVTKDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALTQNANLAASGAA 366
++ + ++ DG L + + ++ TG + T GH + A + ++G
Sbjct: 280 VNHASLSPDGKLLAIVGDNPEGLIVDPNTGKTLETLSGHLDFSFASAWHPDGVTFSTGNQ 339
Query: 367 DFTAKLWDARYGDMVHTFEHEHI--VKSVNFNADDTLLVTASNEKLIRVFDLN 519
D T ++WD R T ++ ++S+ + +D + A + V+D++
Sbjct: 340 DKTCRVWDIRNLSQSVTVLKGNLGAIRSIRYTSDGKYMAMAEPADFVHVYDVS 392
>At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 (1
significant) WD-40 repeats (PF0400); similar to Trp-Asp
repeat protein (PIR:T40094) [Schizosaccharomyces]
Length = 445
Score = 32.7 bits (71), Expect = 0.32
Identities = 22/113 (19%), Positives = 48/113 (42%), Gaps = 2/113 (1%)
Frame = +1
Query: 187 LDFSDVTKDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALTQNANLAASGAA 366
++ + ++ DG L + + +L TG + T GH + A + ++G
Sbjct: 278 VNHTSLSPDGKLLTIVGDNPESLLVDPNTGKTLATLSGHLDFSFASAWHPDGFTFSTGNQ 337
Query: 367 DFTAKLWDAR-YGDMVHTFE-HEHIVKSVNFNADDTLLVTASNEKLIRVFDLN 519
D T ++WD R V + ++S+ + +D + A + V+D++
Sbjct: 338 DKTCRVWDIRNLSKSVAVLRGNLGAIRSIRYTSDGKYMAMAEPADFVHVYDVS 390
>At1g24130.1 68414.m03044 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats
(PF00400);similar to beta transducin-like protein
HET-D2Y (GI:17225210) [Podospora anserina].
Length = 415
Score = 32.7 bits (71), Expect = 0.32
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +1
Query: 202 VTKDGY-YLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALTQNANLAASGAADFTA 378
V+KDG+ Y SA K K ++ + + T H AV +A++++ + SGA D +
Sbjct: 243 VSKDGFVYTGSADKKIKVWNKKDKKHSLVATLTKHLSAVNALAISEDGKVLYSGACDRSI 302
Query: 379 KLWD 390
+W+
Sbjct: 303 LVWE 306
>At3g45620.1 68416.m04927 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats; similar to
PC326 protein (GI:200241) (PIR2:S37694) [Mus
musculus];Human (H326) translated mRNA - Homo sapiens,
EMBL:HS06631
Length = 481
Score = 32.3 bits (70), Expect = 0.42
Identities = 24/94 (25%), Positives = 40/94 (42%), Gaps = 5/94 (5%)
Frame = +1
Query: 277 DWIGTFEGHKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHTFEHEHI-----VK 441
D G GH+G V V ++ SG+ D LW+ G ++ H K
Sbjct: 46 DLYGKLNGHEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSGSRKLSYPSGHCENVFQTK 105
Query: 442 SVNFNADDTLLVTASNEKLIRVFDLNKLEAGPIE 543
+ F DD ++T+ + +R+ + LE G +E
Sbjct: 106 FIPF-TDDRTIITSGADGQVRLGQI--LENGKVE 136
>At2g03280.1 68415.m00282 expressed protein contains Pfam PF03138:
Plant protein family. The function of this family of
plant proteins is unknown; previously annotated as ' axi
1 protein from Nicotiana tabacum -related' based on
similarity to axi 1 protein (GB:X80301) (GI:559920) from
[Nicotiana tabacum], which, due to scienitific fraud was
retracted. Retraction in: Schell J. EMBO J 1999 May
17;18(10):2908. PMID:10400497.
Length = 481
Score = 32.3 bits (70), Expect = 0.42
Identities = 21/77 (27%), Positives = 32/77 (41%)
Frame = -2
Query: 455 LKLTLFTMCSCSKVWTISPYRASHNFAVKSAAPLAAKFAFCVSATPQTAPL*PSNVPIQS 276
L++ F +CSC VWT H+ ++F+ V + P PL P N
Sbjct: 31 LQVWFFRVCSCILVWTCLIQLFWHSQIFTGLTNHISRFSLPVQSVPLPPPLPPRNYTSNG 90
Query: 275 PVSPCRNIGLPSLQAEI 225
+ N GL ++A I
Sbjct: 91 ILLVSCNGGLNQMRAAI 107
>At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota,PID:g2253631
Length = 457
Score = 31.9 bits (69), Expect = 0.56
Identities = 35/188 (18%), Positives = 81/188 (43%), Gaps = 11/188 (5%)
Frame = +1
Query: 211 DGYYLISACKDGKPMLRQGETGDWIGTFEG-HKGAVWGVALTQNANLAASGAADFTAKLW 387
DG ++ + + L + + T +G H+ V +A N ++ +G D
Sbjct: 193 DGRHVAVGLNNSEVQLWDSASNRQLRTLKGGHQSRVGSLAW--NNHILTTGGMDGLIINN 250
Query: 388 DARY-GDMVHTFE-HEHIVKSVNFNADDTLLVTASNEKLIRVFDLNKLEAGP----IEKI 549
D R +V T+ H V + ++ L + N+ ++ ++D + + + ++
Sbjct: 251 DVRIRSPIVETYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRL 310
Query: 550 NGHTSSIRHAVFLN-NSRIVSVSD---DNTMRVWDRNSGEEVQKVEFQSVPNSLXLSRDG 717
HTS+++ + + +++ D T++ W+ ++G + V+ S SL S++
Sbjct: 311 EEHTSAVKALAWCPFQANLLATGGGGGDRTIKFWNTHTGACLNSVDTGSQVCSLLWSKNE 370
Query: 718 AILTVAHG 741
L +HG
Sbjct: 371 RELLSSHG 378
Score = 27.9 bits (59), Expect = 9.1
Identities = 21/93 (22%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Frame = +1
Query: 592 NSRIVSVSDDNTMRVWDRNSG--EEVQKVEFQSVP-NSLXLSRDGAILTVA-HGTNVSFY 759
++ +++++ D+T+ +WD ++G E+ ++ + P S+ + DG + V + + V +
Sbjct: 150 SANVLAIALDHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLW 209
Query: 760 TSDTMRKLREFPVPTKCYSASLAPXRATFVCGG 858
S + R+LR + SLA GG
Sbjct: 210 DSASNRQLRTLKGGHQSRVGSLAWNNHILTTGG 242
>At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota, PID:g2253631
Length = 447
Score = 31.9 bits (69), Expect = 0.56
Identities = 35/188 (18%), Positives = 81/188 (43%), Gaps = 11/188 (5%)
Frame = +1
Query: 211 DGYYLISACKDGKPMLRQGETGDWIGTFEG-HKGAVWGVALTQNANLAASGAADFTAKLW 387
DG ++ + + L + + T +G H+ V +A N ++ +G D
Sbjct: 183 DGRHVAVGLNNSEVQLWDSASNRQLRTLKGGHQSRVGSLAW--NNHILTTGGMDGLIINN 240
Query: 388 DARY-GDMVHTFE-HEHIVKSVNFNADDTLLVTASNEKLIRVFDLNKLEAGP----IEKI 549
D R +V T+ H V + ++ L + N+ ++ ++D + + + ++
Sbjct: 241 DVRIRSPIVETYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRL 300
Query: 550 NGHTSSIRHAVFLN-NSRIVSVSD---DNTMRVWDRNSGEEVQKVEFQSVPNSLXLSRDG 717
HTS+++ + + +++ D T++ W+ ++G + V+ S SL S++
Sbjct: 301 EEHTSAVKALAWCPFQANLLATGGGGGDRTIKFWNTHTGACLNSVDTGSQVCSLLWSKNE 360
Query: 718 AILTVAHG 741
L +HG
Sbjct: 361 RELLSSHG 368
Score = 27.9 bits (59), Expect = 9.1
Identities = 21/93 (22%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Frame = +1
Query: 592 NSRIVSVSDDNTMRVWDRNSG--EEVQKVEFQSVP-NSLXLSRDGAILTVA-HGTNVSFY 759
++ +++++ D+T+ +WD ++G E+ ++ + P S+ + DG + V + + V +
Sbjct: 140 SANVLAIALDHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLW 199
Query: 760 TSDTMRKLREFPVPTKCYSASLAPXRATFVCGG 858
S + R+LR + SLA GG
Sbjct: 200 DSASNRQLRTLKGGHQSRVGSLAWNNHILTTGG 232
>At4g18900.1 68417.m02786 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 461
Score = 31.9 bits (69), Expect = 0.56
Identities = 30/118 (25%), Positives = 55/118 (46%), Gaps = 4/118 (3%)
Frame = +1
Query: 301 HKGAVWGVALTQN-ANLAASGAADFTAKLWDARYGDMVHTFEHE-HIVKSVNFN--ADDT 468
H +V G+A + N+ AS +AD K+WD G T EH V++V +N A +
Sbjct: 232 HTRSVLGLAWNKEFRNILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPEV 291
Query: 469 LLVTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVFLNNSRIVSVSDDNTMRVWD 642
LL + ++ ++ +G + S+ +S +VS+ +D T++ +D
Sbjct: 292 LLSGSFDQTVVLKDGRQPSHSGFKWSVMSDVESLAWDPHSEHSFVVSL-EDGTVKGFD 348
>At3g10530.1 68416.m01264 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400); BING4
(gi:3811380) {Mus musculus]; similar to hypothetical
protein GB:P40055 [Saccharomyces cerevisiae]
Length = 536
Score = 31.9 bits (69), Expect = 0.56
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +1
Query: 301 HKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHTFEHEHIVKSVNFN 456
H G V VA N +L A+ + K+WD R + V T H K+++F+
Sbjct: 280 HPGPVSSVAFHPNGHLMATSGKERKIKIWDLRKFEEVQTI-HSFHAKTLSFS 330
>At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352
Length = 444
Score = 31.5 bits (68), Expect = 0.74
Identities = 26/99 (26%), Positives = 39/99 (39%), Gaps = 1/99 (1%)
Frame = +1
Query: 139 KQVPLTCGGHTRPVVHLDFSDVTKDGYYLISACKDGKPMLRQGET-GDWIGTFEGHKGAV 315
+QV GGH V L + D + L + DGK + + T+ GH V
Sbjct: 201 RQVRTLRGGHESRVGSLAW-----DNHILTTGGMDGKIVNNDVRIRSSIVETYLGHTEEV 255
Query: 316 WGVALTQNANLAASGAADFTAKLWDARYGDMVHTFEHEH 432
G+ +++ N ASG D +WD T + H
Sbjct: 256 CGLKWSESGNKQASGGNDNVVHIWDRSLASSKQTRQWLH 294
>At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5
WD-40 repeats (PF0400); similar to WD-40 repeat protein
MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 496
Score = 31.1 bits (67), Expect = 0.98
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Frame = +1
Query: 532 GPIEKINGHTSSIRHAVFLNNS--RIVSVSDDNTMRVWDRNSG-EEVQKVE 675
GP NGH ++ F +S SV DD+ + +WD +G KVE
Sbjct: 272 GPRGIYNGHKDTVEDVAFCPSSAQEFCSVGDDSCLMLWDARTGTSPAMKVE 322
>At5g05970.1 68418.m00661 transducin family protein / WD-40 repeat
family protein contains similarity to regulatory protein
Nedd1; contains Pfam PF00400: WD domain, G-beta repeat
(6 copies, 2 weak)|19804256|gb|AV785466.1|AV785466
Length = 781
Score = 30.7 bits (66), Expect = 1.3
Identities = 29/143 (20%), Positives = 57/143 (39%), Gaps = 4/143 (2%)
Frame = +1
Query: 355 SGAADFTAKLWDARYGDMVHTFE-HEHIVKSVNFNADDTLLVTASNEKLIRVFDL-NKLE 528
SG K+WD + + + H + V +N D L + S + V +L +
Sbjct: 110 SGGTGQIVKIWDLQRKLCIKKLKGHTSTITGVMYNCKDEHLASVSVGGDLIVHNLASGAR 169
Query: 529 AGPIEKINGHTSSIRHAVFLNNSRIVSVSDDNTMRVWDRNS-GEEVQKVEFQSVPNS-LX 702
A ++ NG + + +V+ DD T+ +WD ++ ++ S P + +
Sbjct: 170 ATELKDPNGQVLRLLDYSRSSRHLLVTAGDDGTVHLWDTTGRSPKMSWLKQHSAPTAGVC 229
Query: 703 LSRDGAILTVAHGTNVSFYTSDT 771
S + + G + YT D+
Sbjct: 230 FSPSNEKIIASVGMDKKLYTYDS 252
>At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to BEIGE (GI:3928547) [Rattus norvegicus]; lysosomal
trafficking regulator - Bos taurus, EMBL: AF114785
Length = 3471
Score = 30.7 bits (66), Expect = 1.3
Identities = 34/138 (24%), Positives = 62/138 (44%), Gaps = 12/138 (8%)
Frame = +1
Query: 358 GAADFTAKLWDARYGDMVHTFEHEHI---VKSVNFNADDTLLVTASNEKLIRVFDLNKLE 528
G D T + ++ T E+ H ++ + D ++VT + + L+ V+ ++K
Sbjct: 3248 GFPDRTLRFMSYDQDKLLSTHENLHEGNQIQCAGVSHDGRIVVTGAEDGLVSVWRVSKDG 3307
Query: 529 AGPIEKINGHTSSIRHA---VFLNNSR----IVSVSDDNTMRVWDRNSGEEVQKVEFQSV 687
++ S H + L S+ I S SDD T+ +WD +S V+++ SV
Sbjct: 3308 PRGSRRLRLEKSLCAHTAKVICLRVSQPYMMIASSSDDCTVIIWDLSSLSFVRQLPNFSV 3367
Query: 688 PNSLXLSRD--GAILTVA 735
P ++ D G I+T A
Sbjct: 3368 PVTVVYINDLTGEIVTAA 3385
>At3g21060.1 68416.m02662 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Retinoblastoma-binding protein 5 (RBBP-5)
[Homo sapiens](RBQ-3)
Length = 547
Score = 30.7 bits (66), Expect = 1.3
Identities = 24/109 (22%), Positives = 47/109 (43%), Gaps = 4/109 (3%)
Frame = +1
Query: 376 AKLWDARYGDMVHTFEH--EH-IVKSVNFNADDTLLVTASNEKLIRVFDLNKLEAGPIEK 546
A + D GD E EH ++K V FN +LL + ++D +
Sbjct: 3 APIIDPLQGDFPEVIEEYLEHGVIKCVAFNHRGSLLAAGCADGGCVIWDFETRGIAKEIR 62
Query: 547 INGHTSSIRHAVFLN-NSRIVSVSDDNTMRVWDRNSGEEVQKVEFQSVP 690
N +++I + R++ + D ++ +WD ++GE++ + Q P
Sbjct: 63 DNDCSAAITSVSWSKYGHRLLVSAADKSLTLWDVSTGEKIARTILQQTP 111
>At2g20330.1 68415.m02374 transducin family protein / WD-40 repeat
family protein similar to Transcriptional repressor
rco-1 (SP:P78706) [Neurospora crassa]; similar to
TUP1(GB:AF079369); contains 6 WD-40 repeats (PF00400)
Length = 648
Score = 30.7 bits (66), Expect = 1.3
Identities = 27/137 (19%), Positives = 59/137 (43%), Gaps = 18/137 (13%)
Frame = +1
Query: 295 EGHKGAVWGVALTQNANLAASGAADFTAKLWDAR-YGDMVHTFEH-----EHIVKSVNFN 456
+GH V +A+ SG+ D+T +++D + + +F H V+SV+++
Sbjct: 174 KGHTKIVSSLAVDSAGARVLSGSYDYTVRMYDFQGMNSRLQSFRQIEPSEGHQVRSVSWS 233
Query: 457 ADDTLLVTASNEKLIRVFDLNKLEAGPIEK----------INGHTSSIRHAVFLNNSR-- 600
+ + ++FD + L G K GH + + ++
Sbjct: 234 PTSGQFLCVTGSAQAKIFDRDGLTLGEFMKGDMYIRDLKNTKGHICGLTCGEWHPRTKET 293
Query: 601 IVSVSDDNTMRVWDRNS 651
+++ S+D ++R+WD N+
Sbjct: 294 VLTSSEDGSLRIWDVNN 310
>At2g16405.1 68415.m01878 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD-repeat protein 13 (SP:Q9H1Z4) [Homo
sapiens]
Length = 482
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +1
Query: 526 EAGPIEKINGHTSSIRHAVFL-NNSRIVSVSDDNTMRVWDRNSG 654
E ++++ GH+ + F NN I S S D T+RVW+ + G
Sbjct: 205 EPSVLKQLTGHSKDVTDFDFSSNNQYIASSSLDKTIRVWELSRG 248
>At5g41960.1 68418.m05109 expressed protein
Length = 217
Score = 29.5 bits (63), Expect = 3.0
Identities = 20/71 (28%), Positives = 33/71 (46%)
Frame = -2
Query: 374 VKSAAPLAAKFAFCVSATPQTAPL*PSNVPIQSPVSPCRNIGLPSLQAEIK*YPSFVTSL 195
+ S+A L K S++ +PL P P+Q+P CR I +AE VT++
Sbjct: 12 LSSSASLYTKARLLSSSSSSPSPL-PLAYPLQNPKKLCRKIERVICRAEFSQDAPLVTAI 70
Query: 194 KSKCTTGLVWP 162
+ + V+P
Sbjct: 71 GACILSSFVFP 81
>At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 580
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = +1
Query: 502 RVFDLNKLEAGPIEKINGHTSSIRHAVFLNNSRIVSVSDDNTMRVWD 642
R+FDL E G I H + V + +VS S D T+R+WD
Sbjct: 437 RLFDLR--ENGFISSWRAHDGYVTKLVAPESHLLVSSSLDKTLRIWD 481
>At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to Fzr1
(GI:6463679){Homo sapiens}
Length = 481
Score = 29.5 bits (63), Expect = 3.0
Identities = 35/162 (21%), Positives = 64/162 (39%), Gaps = 7/162 (4%)
Frame = +1
Query: 277 DWIGTFEGHKGAVWGVALTQNANLAASGAADFTAKLWDAR-YGDMVHTFEHEHIVKSVNF 453
D++ GHK V G+ + + ASG D +W+ ++ EH VK++ +
Sbjct: 289 DFVSKLVGHKSEVCGLKWSHDDRELASGGNDNQLLVWNNHSQQPILKLTEHTAAVKAITW 348
Query: 454 NADDTLLVTASN---EKLIRVFDLNKLEAGPIEKINGHTSSIRHAVFLNNSRIVSVS--D 618
+ + L+ + ++ IR + N + I+ + A N + IVS
Sbjct: 349 SPHQSSLLASGGGTADRCIRFW--NTTNGNQLNSIDTGSQVCNLAWSKNVNEIVSTHGYS 406
Query: 619 DNTMRVWDRNSGEEVQKVEFQSV-PNSLXLSRDGAILTVAHG 741
N + +W S +V + S+ L S DG + G
Sbjct: 407 QNQIMLWKYPSMSKVATLTGHSMRVLYLATSPDGQTIVTGAG 448
>At3g54210.1 68416.m05992 ribosomal protein L17 family protein
contains Pfam profile: PF01196 ribosomal protein L17
Length = 211
Score = 29.5 bits (63), Expect = 3.0
Identities = 19/66 (28%), Positives = 33/66 (50%)
Frame = -2
Query: 428 SCSKVWTISPYRASHNFAVKSAAPLAAKFAFCVSATPQTAPL*PSNVPIQSPVSPCRNIG 249
S S+VW++S +++ P ++ P ++P PS + SPV+P +IG
Sbjct: 15 SVSRVWSMSSLKSALPSTASLRLPSSSSRRPVTLRLPISSPSLPSFSGL-SPVNPLLSIG 73
Query: 248 LPSLQA 231
LP Q+
Sbjct: 74 LPDWQS 79
>At1g65030.1 68414.m07371 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to PAK/PLC-interacting protein 1 (GI:14211689)
[Homo sapiens]
Length = 345
Score = 29.5 bits (63), Expect = 3.0
Identities = 34/152 (22%), Positives = 59/152 (38%), Gaps = 1/152 (0%)
Frame = +1
Query: 223 LISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALTQNANLAASGAADFTAKLWDARYG 402
LISA DG + + + +F HK AV +A+ + LA + D + + G
Sbjct: 103 LISAAADGSVAIFDTDPFVLLKSFRPHKKAVNDLAIHPSGKLALAVYRDEFFAMLNLVRG 162
Query: 403 DMVHTFEHEHIVKSVNFN-ADDTLLVTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHA 579
H V F+ + + + SN+ + + KL +E N I A
Sbjct: 163 KRSFCCRLGHEASLVKFDPSGERFYMVVSNKVGVHQSEDAKL---LLELENPSRKRILCA 219
Query: 580 VFLNNSRIVSVSDDNTMRVWDRNSGEEVQKVE 675
+ + + +D + WD NSG+ +E
Sbjct: 220 TPGESGTLFTGGEDRAITAWDTNSGKLAYSIE 251
>At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to Lipopolysaccharide-responsive and beige-like anchor
protein (CDC4-like protein) (Beige-like protein)
(SP:P50851) [Homo sapiens}
Length = 1280
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +1
Query: 274 GDWIGTFEGHKGAVWGVALTQNANLAASGAADFTAKLWD 390
G + + HK V VA+T ++ + A+G+ D T +WD
Sbjct: 1036 GRVVQSIRHHKDVVSCVAVTADSTILATGSYDTTVMVWD 1074
>At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to pre-mRNA splicing
factor PRP17 (SP:O60508) [Homo sapiens]
Length = 457
Score = 29.1 bits (62), Expect = 4.0
Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 3/111 (2%)
Frame = +1
Query: 166 HTRPVVHLDFSDVTKDGYYLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVAL--TQN 339
H PV + +S K G L+S D L E G +F+ + V GV N
Sbjct: 204 HNAPVKDVKWS---KQGLSLLSCGYDCTSRLFDVERGVETQSFK--EDEVVGVVKFHPDN 258
Query: 340 ANLAASGAADFTAKLWDARYGDMVHTFEHE-HIVKSVNFNADDTLLVTASN 489
N+ SG + + +LWD R VH + + + V F A +++S+
Sbjct: 259 CNVFLSGGSKGSLRLWDIRANKFVHEYVRDLGPILDVEFIAGGKQFISSSD 309
>At5g50640.1 68418.m06274 CBS domain-containing protein /
octicosapeptide/Phox/Bemp1 (PB1) domain-containing
protein contains Pfam profiles: PF00571 CBS domain,
PF00564: PB1 domain
Length = 548
Score = 29.1 bits (62), Expect = 4.0
Identities = 24/88 (27%), Positives = 38/88 (43%)
Frame = +1
Query: 475 VTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVFLNNSRIVSVSDDNTMRVWDRNSG 654
+ N K+++V L++ G K+ + SS + N + S D MRV +N
Sbjct: 233 IIPENTKVLKV-GLDETVLGVTMKMVEYQSSAAMVMVENKLVGILTSKDILMRVISQNLP 291
Query: 655 EEVQKVEFQSVPNSLXLSRDGAILTVAH 738
+E VE PN + D AI+ H
Sbjct: 292 QETTTVEKVMTPNPESATVDMAIVEALH 319
>At5g50530.1 68418.m06258 CBS domain-containing protein /
octicosapeptide/Phox/Bemp1 (PB1) domain-containing
protein contains Pfam profiles: PF00571 CBS domain,
PF00564: PB1 domain
Length = 548
Score = 29.1 bits (62), Expect = 4.0
Identities = 24/88 (27%), Positives = 38/88 (43%)
Frame = +1
Query: 475 VTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVFLNNSRIVSVSDDNTMRVWDRNSG 654
+ N K+++V L++ G K+ + SS + N + S D MRV +N
Sbjct: 233 IIPENTKVLKV-GLDETVLGVTMKMVEYQSSAAMVMVENKLVGILTSKDILMRVISQNLP 291
Query: 655 EEVQKVEFQSVPNSLXLSRDGAILTVAH 738
+E VE PN + D AI+ H
Sbjct: 292 QETTTVEKVMTPNPESATVDMAIVEALH 319
>At3g06880.1 68416.m00817 transducin family protein / WD-40 repeat
family protein similar to PAK/PLC-interacting protein 1
(GI:4211689) {Homo sapiens}
Length = 1115
Score = 29.1 bits (62), Expect = 4.0
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +1
Query: 469 LLVTASNEKLIRVFDLNKLEAGPIEKINGHTSSIR-HAVFLNNSRIVSVSDDNTMRVWDR 645
LL + ++ IRV+++NK A + I H S++ ++ ++S S D T+RVW
Sbjct: 865 LLFSGFSDGSIRVWNVNKKIATLLWDIKEHKSTVTCFSLSETGECVLSGSADKTIRVWQI 924
Query: 646 NSGE 657
G+
Sbjct: 925 VKGK 928
>At1g76910.1 68414.m08953 hypothetical protein
Length = 139
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +2
Query: 728 LLHTVQTYRFIRRTRCASYASSPCQRSATRHRWLRXGRPSCAA 856
+LH +T I R R + S SA+ +RWL + SC +
Sbjct: 32 MLHWTETVTNIGRCRVSGRGGSELGMSASGNRWLATAKNSCGS 74
>At1g64350.1 68414.m07292 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to nuclear pore protein SEH1 (SP:P53011)
[Saccharomyces cerevisiae]
Length = 326
Score = 29.1 bits (62), Expect = 4.0
Identities = 12/44 (27%), Positives = 19/44 (43%)
Frame = +1
Query: 283 IGTFEGHKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVH 414
+ + GH+G VW + + AS +D KLW + H
Sbjct: 273 VSSLSGHQGEVWQMEWDMSGMTLASTGSDGMVKLWQSNLNGEWH 316
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 28.7 bits (61), Expect = 5.2
Identities = 28/134 (20%), Positives = 59/134 (44%), Gaps = 9/134 (6%)
Frame = +1
Query: 301 HKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHTFE-------HEHIVKSVNFNA 459
H AV + + + L ASGA +W + +++ H V + ++
Sbjct: 63 HGCAVNTIRFSPSGELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSP 122
Query: 460 DDTLLVTASNEKLIRVFDLNKLEAGPIEKI-NGHTSSIRHAVFLNNSR-IVSVSDDNTMR 633
DD L++ S + ++D+NK G + +I + H ++ + ++ + S+S D T R
Sbjct: 123 DDAYLISGSVDNSCIIWDVNK---GSVHQILDAHCHYVQGVAWDPLAKYVASLSSDRTCR 179
Query: 634 VWDRNSGEEVQKVE 675
++ + + VE
Sbjct: 180 IYANKPQTKSKGVE 193
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 28.7 bits (61), Expect = 5.2
Identities = 28/134 (20%), Positives = 59/134 (44%), Gaps = 9/134 (6%)
Frame = +1
Query: 301 HKGAVWGVALTQNANLAASGAADFTAKLWDARYGDMVHTFE-------HEHIVKSVNFNA 459
H AV + + + L ASGA +W + +++ H V + ++
Sbjct: 63 HGCAVNTIRFSPSGELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSP 122
Query: 460 DDTLLVTASNEKLIRVFDLNKLEAGPIEKI-NGHTSSIRHAVFLNNSR-IVSVSDDNTMR 633
DD L++ S + ++D+NK G + +I + H ++ + ++ + S+S D T R
Sbjct: 123 DDAYLISGSVDNSCIIWDVNK---GSVHQILDAHCHYVQGVAWDPLAKYVASLSSDRTCR 179
Query: 634 VWDRNSGEEVQKVE 675
++ + + VE
Sbjct: 180 IYANKPQTKSKGVE 193
>At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 709
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +1
Query: 535 PIEKINGHTSSIRHAVFLNNSRIVSVSDDNTMRVWDRNSGEEVQKV 672
P + GHT I + ++S S D T+R+W S +E +V
Sbjct: 355 PQHEFRGHTGEILDLSWSEKGFLLSSSVDETVRLWRVGSSDECIRV 400
>At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis};
Length = 466
Score = 28.7 bits (61), Expect = 5.2
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 1/87 (1%)
Frame = +1
Query: 139 KQVPLTCGGHTRPVVHLDFSDVTKDGYYLISACKDGKPMLRQGET-GDWIGTFEGHKGAV 315
+QV GGH V L +++ + L + DGK + +GT+ GH V
Sbjct: 198 RQVRTLIGGHESRVGSLAWNN-----HILTTGGMDGKIVNNDVRIRSSIVGTYLGHTEEV 252
Query: 316 WGVALTQNANLAASGAADFTAKLWDAR 396
G+ +++ ASG +WD R
Sbjct: 253 CGLKWSESGKKLASGGNYNVVHIWDHR 279
>At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1102
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +1
Query: 283 IGTFEGHKGAVWGVALTQ-NANLAASGAADFTAKLWD 390
+G HKG V G+ ++NL ASGA D +WD
Sbjct: 115 VGHLSVHKGPVRGLEFNAISSNLLASGADDGEICIWD 151
>At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1104
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +1
Query: 283 IGTFEGHKGAVWGVALTQ-NANLAASGAADFTAKLWD 390
+G HKG V G+ ++NL ASGA D +WD
Sbjct: 115 VGHLSVHKGPVRGLEFNAISSNLLASGADDGEICIWD 151
>At2g14080.1 68415.m01566 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1215
Score = 28.7 bits (61), Expect = 5.2
Identities = 18/64 (28%), Positives = 30/64 (46%)
Frame = -2
Query: 605 TMRELFRNTACLMLLVCPFIFSIGPASSLLRSKTRISFSLLAVTNNVSSALKLTLFTMCS 426
T E+ C L+ PF SIG A+ LL+ + SLL + +++ +A+ L
Sbjct: 697 TNLEVLNLNGCSSLVELPF--SIGNATKLLKLELSGCSSLLELPSSIGNAINLQTIDFSH 754
Query: 425 CSKV 414
C +
Sbjct: 755 CENL 758
>At1g76780.1 68414.m08935 expressed protein ; expression supported
by MPSS
Length = 1871
Score = 28.7 bits (61), Expect = 5.2
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +1
Query: 481 ASNEKLIRVFDLNKLEAGPIEKIN--GHTSSIRHAVFLNNSRIVSVSDDNTMRVWDRNSG 654
A EK F+ +KLEA ++KIN G+T RH+ N ++ + ++ +
Sbjct: 269 AETEKNDEEFESDKLEADEVDKINEGGNTKVRRHSEDRNLIKLQEKEEQHSKEQKGHSKE 328
Query: 655 EEVQKVEFQSVPNS 696
E ++++ + P +
Sbjct: 329 ENMKELVEEKTPEA 342
>At1g65850.1 68414.m07472 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1036
Score = 28.7 bits (61), Expect = 5.2
Identities = 20/68 (29%), Positives = 35/68 (51%)
Frame = -2
Query: 617 SLTLTMRELFRNTACLMLLVCPFIFSIGPASSLLRSKTRISFSLLAVTNNVSSALKLTLF 438
S ++ELF C L+ P SIG A++L + + SL+ + +++ + KL
Sbjct: 676 STATNLQELFL-VKCSSLVELPS--SIGKATNLQKLYLNMCTSLVELPSSIGNLHKLQKL 732
Query: 437 TMCSCSKV 414
T+ CSK+
Sbjct: 733 TLNGCSKL 740
>At1g08060.2 68414.m00881 MOM1 identical to MOM1 (mutation in a
'Morpheus molecule') [Arabidopsis thaliana]
gi|8132770|gb|AAF73381.1|
Length = 2001
Score = 28.7 bits (61), Expect = 5.2
Identities = 26/93 (27%), Positives = 40/93 (43%), Gaps = 1/93 (1%)
Frame = -2
Query: 407 ISPYRASHNFAVKSAAPLAAKFAFCVSATPQTAPL*PSNVPIQSPVSPCRNIGLPSLQAE 228
+ P +S +V + L FA C P+ PL SN+ V+P N GL S
Sbjct: 1882 LQPQASSFPSSVSRPSALLLNFAVCPMPQPRQ-PL-ISNIAPTPSVTPATNPGLRSPAPH 1939
Query: 227 IK*Y-PSFVTSLKSKCTTGLVWPPHVRGTCLSV 132
+ Y PS T + + T V P + + +S+
Sbjct: 1940 LNSYRPSSSTPVATATPTSSVPPQALTYSAVSI 1972
>At1g08060.1 68414.m00880 MOM1 identical to MOM1 (mutation in a
'Morpheus molecule') [Arabidopsis thaliana]
gi|8132770|gb|AAF73381.1|
Length = 2001
Score = 28.7 bits (61), Expect = 5.2
Identities = 26/93 (27%), Positives = 40/93 (43%), Gaps = 1/93 (1%)
Frame = -2
Query: 407 ISPYRASHNFAVKSAAPLAAKFAFCVSATPQTAPL*PSNVPIQSPVSPCRNIGLPSLQAE 228
+ P +S +V + L FA C P+ PL SN+ V+P N GL S
Sbjct: 1882 LQPQASSFPSSVSRPSALLLNFAVCPMPQPRQ-PL-ISNIAPTPSVTPATNPGLRSPAPH 1939
Query: 227 IK*Y-PSFVTSLKSKCTTGLVWPPHVRGTCLSV 132
+ Y PS T + + T V P + + +S+
Sbjct: 1940 LNSYRPSSSTPVATATPTSSVPPQALTYSAVSI 1972
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis
thaliana, EMBL:AF029262
Length = 411
Score = 28.3 bits (60), Expect = 6.9
Identities = 38/191 (19%), Positives = 79/191 (41%), Gaps = 12/191 (6%)
Frame = +1
Query: 205 TKDGYYLISACKDGKPMLRQGETGDWIGTFEG-HKGAVWGVALTQNANLAASGAADFTAK 381
T+DG L + + L + + T G H+ V +A N ++ +G D
Sbjct: 143 TQDGLDLAIGLDNSEVQLWDCVSNRQVRTLRGGHESRVGSLAW--NNHILTTGGMDGKIV 200
Query: 382 LWDARY-GDMVHTF-EHEHIVKSVNFNADDTLLVTASNEKLIRVFDLNKL-EAGP----I 540
D R +V T+ H V + ++ L + N+ ++ ++D + + P +
Sbjct: 201 NNDVRIRSSIVETYLGHTEEVCGLKWSESGKKLASGGNDNVVHIWDHRSVASSNPTRQWL 260
Query: 541 EKINGHTSSIRHAVFLN-NSRIVSVSD---DNTMRVWDRNSGEEVQKVEFQSVPNSLXLS 708
+ HT+++R + + +++ D ++ W+ ++G + VE S SL S
Sbjct: 261 HRFEEHTAAVRALAWCPFQASLLATGGGVGDGKIKFWNTHTGACLNSVETGSQVCSLLWS 320
Query: 709 RDGAILTVAHG 741
+ L +HG
Sbjct: 321 KSERELLSSHG 331
Score = 28.3 bits (60), Expect = 6.9
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 1/87 (1%)
Frame = +1
Query: 139 KQVPLTCGGHTRPVVHLDFSDVTKDGYYLISACKDGKPMLRQGET-GDWIGTFEGHKGAV 315
+QV GGH V L +++ + L + DGK + + T+ GH V
Sbjct: 167 RQVRTLRGGHESRVGSLAWNN-----HILTTGGMDGKIVNNDVRIRSSIVETYLGHTEEV 221
Query: 316 WGVALTQNANLAASGAADFTAKLWDAR 396
G+ +++ ASG D +WD R
Sbjct: 222 CGLKWSESGKKLASGGNDNVVHIWDHR 248
>At5g17370.1 68418.m02036 WD-40 repeat family protein contains 1
significant, 2 weak WD-40 repeats (PF00400); similar to
transducin beta-like 1 protein.(SP:O60907) [Homo
sapiens]
Length = 467
Score = 28.3 bits (60), Expect = 6.9
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +1
Query: 547 INGHTSSIRHAVFLNNSRIVSVSDDNTMRVWDRNSGEEVQKVEF-QSVPNSLXLSRD 714
+N HT I + + I+S DD R+W SG+ + + +F SVP+ + S D
Sbjct: 386 VNSHTP-IEFGIDPSERFILSGGDDCYTRIWSIKSGQLMSENKFSNSVPSVVCWSAD 441
>At4g29860.1 68417.m04250 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); WDVCF
variant 1 (gi:12006981) [Mus musculus]
Length = 386
Score = 28.3 bits (60), Expect = 6.9
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +1
Query: 277 DWIGTFEGHKGAVWGVALTQNANLAASGAADFTAKLWD 390
D + GH+ +V V+ + +L +G+AD ++WD
Sbjct: 8 DPVAVLRGHRHSVMDVSFHPSKSLLFTGSADGELRIWD 45
>At1g29260.1 68414.m03578 peroxisomal targeting signal type 2
receptor (PEX7) identical to peroxisomal targeting
signal type 2 receptor (Pex7p) (GI:9502414) [Arabidopsis
thaliana]; WD-40 repeat protein family member; contains
6 WD-40 repeats (PF00400); similar to peroxismal
targeting signal 2 receptor (PTS2R) (Peroxin-7)
(PEX7)(SP:O00628) [Homo sapiens]
Length = 317
Score = 28.3 bits (60), Expect = 6.9
Identities = 28/120 (23%), Positives = 58/120 (48%), Gaps = 9/120 (7%)
Frame = +1
Query: 310 AVWGVALTQNANLAASGA-ADFTAKLWDARY---GDMVHTF-EHEHIVKSVNFNAD--DT 468
AV+ V +++ + A D + K++D + + +F EH V+SV++N D+
Sbjct: 62 AVYDVCWSESHDSVLIAAIGDGSVKIYDTALPPPSNPIRSFQEHAREVQSVDYNPTRRDS 121
Query: 469 LLVTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVF--LNNSRIVSVSDDNTMRVWD 642
L T+S + ++++ +++ + H + AV+ + S S D T+R+WD
Sbjct: 122 FL-TSSWDDTVKLWAMDR--PASVRTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWD 178
>At1g19750.1 68414.m02469 transducin family protein / WD-40 repeat
family protein similar to Cockayne syndrome
complementaion group A proteins (GI:18077663)[Mus
musculus] and (SP:Q13216)[Homo sapiens]; confirmed by
full-length cDNA GI:15982896
Length = 450
Score = 28.3 bits (60), Expect = 6.9
Identities = 29/125 (23%), Positives = 49/125 (39%), Gaps = 5/125 (4%)
Frame = +1
Query: 301 HKGAVWGVALTQNANLAASGAADFTAKLWDARYG-DMVHTFEHEHIV--KSVNFN-ADDT 468
H G V G+ T + S + +LWD G + + FE I +++ + +DD
Sbjct: 311 HYGVVTGLKATNDGMYLLSAGSYSRIRLWDIESGRNTLVNFETGRIQTDRAIQLDTSDDP 370
Query: 469 LLVTASNEKLIRVFDLNKLEAGPIEKINGHTSSIRHAVFLNNSRIVSVSD-DNTMRVWDR 645
LV K ++ F + + GH S+ F +N + + S D + VW
Sbjct: 371 ALVFVPCMKTVKGFGM--WSGRTTLMLRGHYESVNTCCFNSNDQELYTSGADRQIIVWSP 428
Query: 646 NSGEE 660
E
Sbjct: 429 GGSVE 433
>At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8
WD-40 repeats (PF00400) (2 weak)
Length = 1108
Score = 27.9 bits (59), Expect = 9.1
Identities = 16/73 (21%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Frame = +1
Query: 436 VKSVNFNADDTLLVTASNEKLIRVFDLN-KLEAGPIEKINGHTSSIRHAVFLNNSR---I 603
V V ++ D + A + LI+++ + + +I+ H ++ F N +R +
Sbjct: 410 VTRVAWSPDGNFIGVAFTKHLIQLYAFSGPNDLRQHTEIDAHVGAVNDLAFANPNRQLCV 469
Query: 604 VSVSDDNTMRVWD 642
++ DD ++VWD
Sbjct: 470 ITCGDDKLIKVWD 482
>At4g30250.1 68417.m04301 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 512
Score = 27.9 bits (59), Expect = 9.1
Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +1
Query: 253 MLRQGETGDWIGTFEGHKGAVWGVALTQ-NANLAASGAADFTAKLWDARYGDMVHTFEHE 429
+ ++G+ G++E G G L + +++ SG +FT LW + + F
Sbjct: 304 LTKRGKNKKKNGSYEYDPGLTNGSGLEEPGSSVTLSGLLNFTDGLWSCCGSEKIFVFTTN 363
Query: 430 HIVK 441
HI K
Sbjct: 364 HIEK 367
>At3g56990.1 68416.m06344 glycine-rich protein conserved
hypothetical protein SPCC330.09 - Schizosaccharomyces
pombe, PIR:T41319
Length = 711
Score = 27.9 bits (59), Expect = 9.1
Identities = 43/195 (22%), Positives = 83/195 (42%), Gaps = 16/195 (8%)
Frame = +1
Query: 199 DVTKDGYYLISACKDGKPMLRQG--ETGDWIGTFEGHKGAVWGVALTQNANLAASGAADF 372
D+T D + C P L + E G ++ A+ V+ + L A G D
Sbjct: 145 DMTYDSWSCDLLCAASSPDLYRINLEQGRFLSPLSTQSPALNVVSRSNLHGLVACGGEDG 204
Query: 373 TAKLWD-------ARYGDMVHTFEHEHIVKSVNFNADDTLLVTA-SNEKLIRVFDLNKLE 528
+ +D AR + H + V ++ F+ + L V S+ + ++DL
Sbjct: 205 AVEFFDMRMKSSAARINAVTHGGDAAAEVTAIEFDDSEGLQVAVGSSAGKVFIYDLRT-- 262
Query: 529 AGPIE-KINGHTSSIRHAVF---LNNSRIVSVSDD-NTMRVWDRNSGEEVQKVE-FQSVP 690
+ PI K + + S I + + LN + ++ + + +R+WD N+GE + +E Q
Sbjct: 263 STPIRVKDHMYESPILNIKWQRTLNTQQPKLITTNKHIVRIWDPNTGEGMTSIEPTQGGI 322
Query: 691 NSLXLSRDGAILTVA 735
N + + R ++ +A
Sbjct: 323 NDICVFRGSGLMLLA 337
>At2g45330.1 68415.m05641 tRNA 2'phosphotransferase, putative
contains similarity to Swiss-Prot:Q12272 tRNA
2'phosphotransferase [Saccharomyces cerevisiae];
contains Pfam domain PF01885: RNA 2'-phosphotransferase,
Tpt1 / KptA family
Length = 257
Score = 27.9 bits (59), Expect = 9.1
Identities = 28/110 (25%), Positives = 51/110 (46%), Gaps = 4/110 (3%)
Frame = +1
Query: 493 KLIRVFDLNKLEAGPIEKINGHT-SSIRHAVFLNNSRIVSVSDDNTMRVWDRNSGEEVQK 669
K+ + +LN + I+ + HT IR AV +N + S+ D+N + N G +
Sbjct: 81 KVEDLLNLNLKTSANIQ-LKSHTIDEIREAVRRDNKQRFSLIDENGELLIRANQGHSITT 139
Query: 670 VEFQSVPNSLXLSRDGAILTVAHGT---NVSFYTSDTMRKLREFPVPTKC 810
VE + + + LS + A + V HGT N+ + ++++ V C
Sbjct: 140 VESEKLLKPI-LSPEEAPVCV-HGTYRKNLESILASGLKRMNRMHVHFSC 187
>At1g20840.1 68414.m02611 transporter-related low similarity to
D-xylose proton-symporter [Lactobacillus brevis]
GI:2895856; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 734
Score = 27.9 bits (59), Expect = 9.1
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = -2
Query: 665 WTSSPLLRSQTRIVLSSLTLTMRELFR--NTACLMLLVCPFIFSIGPASSLLRSK 507
WT L+ S +V+S L + + +T C++L C F+ GP ++L S+
Sbjct: 590 WTIPVLIVSLVVLVISELIHISKVVNAALSTGCVVLYFCFFVMGYGPIPNILCSE 644
>At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-related
similar to BEIGE (GI:3928547) [Rattus norvegicus];
Similar to gb|U70015 lysosomal trafficking regulator from
Mus musculus and contains 2 Pfam PF00400 WD-40, G-beta
repeats. ESTs gb|T43386 and gb|AA395236 come from this
gene
Length = 3601
Score = 27.9 bits (59), Expect = 9.1
Identities = 36/129 (27%), Positives = 63/129 (48%), Gaps = 12/129 (9%)
Frame = +1
Query: 412 HTFEHE-HIVKSVNFNADDTLLVTASNEKLIRVFDLNKLEAGP-------IEK-INGHTS 564
H HE + ++ + D ++VT + + L+ V+ ++K GP +EK + HT+
Sbjct: 3324 HENLHESNQIQCAGVSHDGRIVVTGAEDGLVCVWRVSK--DGPRGSRRLRLEKALCAHTA 3381
Query: 565 SIRHA-VFLNNSRIVSVSDDNTMRVWDRNSGEEVQKVEFQSVPNSLXLSRD--GAILTVA 735
+ V I S SDD T+ +WD +S V+++ VP S D G I+T A
Sbjct: 3382 KVTCLRVSQPYMMIASGSDDCTVIIWDLSSLSFVRQLPDFPVPISAIYINDLTGEIVTAA 3441
Query: 736 HGTNVSFYT 762
GT ++ ++
Sbjct: 3442 -GTVLAVWS 3449
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,634,687
Number of Sequences: 28952
Number of extensions: 437517
Number of successful extensions: 1968
Number of sequences better than 10.0: 206
Number of HSP's better than 10.0 without gapping: 1431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1789
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1999652000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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