Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_A04
(829 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17335| Best HMM Match : Enolase_C (HMM E-Value=0) 136 2e-32
SB_29862| Best HMM Match : Enolase_N (HMM E-Value=6e-20) 100 1e-21
SB_28893| Best HMM Match : Enolase_C (HMM E-Value=5.6e-07) 98 7e-21
SB_13920| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.093
SB_27495| Best HMM Match : VWA (HMM E-Value=0) 31 1.1
SB_41075| Best HMM Match : RVT_1 (HMM E-Value=2.1e-30) 29 3.5
SB_30236| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.1
SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40) 29 6.1
SB_52809| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.1
SB_51232| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.1
SB_21143| Best HMM Match : Myosin_tail_1 (HMM E-Value=0.42) 29 6.1
SB_28550| Best HMM Match : Fer2_2 (HMM E-Value=2.49992e-42) 28 8.0
SB_18551| Best HMM Match : RNA_pol_Rpc82 (HMM E-Value=0.69) 28 8.0
SB_9773| Best HMM Match : TPR_2 (HMM E-Value=3.2e-06) 28 8.0
>SB_17335| Best HMM Match : Enolase_C (HMM E-Value=0)
Length = 284
Score = 136 bits (329), Expect = 2e-32
Identities = 58/76 (76%), Positives = 70/76 (92%)
Frame = +3
Query: 495 VPLYKHLADLAGNNDIVLPVPAFNVINGGSHAGNKLAMQEFMIFPTGASTFSEAMRMGSE 674
VPLYK++A LAGNN ++LPVPAFNVINGGSHAGNKLAMQEFM+ PTGAS F EAMRMG+E
Sbjct: 26 VPLYKYIAGLAGNNQVILPVPAFNVINGGSHAGNKLAMQEFMLLPTGASNFREAMRMGAE 85
Query: 675 VYHHLKKIIKEKFGLD 722
+Y +LKK++KEK+G+D
Sbjct: 86 IYQNLKKVVKEKYGID 101
>SB_29862| Best HMM Match : Enolase_N (HMM E-Value=6e-20)
Length = 115
Score = 100 bits (240), Expect = 1e-21
Identities = 46/75 (61%), Positives = 58/75 (77%)
Frame = +3
Query: 198 GLFRAAVPSGASTGVHEALELRDNIKSEYHGKGVLTAIKNINELIAPELTKANLEVTQQR 377
G FRAAVPSGASTG++EALELRD S++ GKGV A+ N+N +I P L N++VT Q
Sbjct: 40 GTFRAAVPSGASTGIYEALELRDKDASKFLGKGVSQAVNNVNTIIGPALVSKNVDVTAQE 99
Query: 378 EIDELMLKLDGTENK 422
+ID +ML+LDGTENK
Sbjct: 100 DIDNMMLQLDGTENK 114
>SB_28893| Best HMM Match : Enolase_C (HMM E-Value=5.6e-07)
Length = 133
Score = 98.3 bits (234), Expect = 7e-21
Identities = 47/86 (54%), Positives = 64/86 (74%)
Frame = +3
Query: 564 NVINGGSHAGNKLAMQEFMIFPTGASTFSEAMRMGSEVYHHLKKIIKEKFGLDSTAVGDE 743
N++NGG+HA + + +QEFMI P GA +F +A G+ VYH LKK++K+K GL +T +GDE
Sbjct: 2 NILNGGAHADSDVDIQEFMIAPIGAESFKQAYEWGAAVYHSLKKVLKDK-GL-ATGLGDE 59
Query: 744 GGFAPNIQNNKDALYLIQDAIXKAGY 821
GGFAPN+ +N AL LI DAI AG+
Sbjct: 60 GGFAPNLPSNAAALDLILDAIKAAGF 85
>SB_13920| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 407
Score = 34.7 bits (76), Expect = 0.093
Identities = 30/131 (22%), Positives = 54/131 (41%), Gaps = 4/131 (3%)
Frame = +3
Query: 441 AILGVSLXXXXXXXXXXNVPLYKHLADL---AGNNDIVLPVPAFNVINGGSHAGNKLAM- 608
A+LGVS+ + +++HLA+ + +P+P +++ G A K M
Sbjct: 112 AVLGVSMATVIAGSMLKKMEVFEHLANTFLEEPSGSQCMPLPVMTLLSSGKLASGKQNMI 171
Query: 609 QEFMIFPTGASTFSEAMRMGSEVYHHLKKIIKEKFGLDSTAVGDEGGFAPNIQNNKDALY 788
+E +I P + S+A V D+G ++P + + AL
Sbjct: 172 KEVLILPKPGESTSKA---------------------SGRCVTDDGSYSPPLDKPETALE 210
Query: 789 LIQDAIXKAGY 821
+QDA+ GY
Sbjct: 211 YLQDAVSGCGY 221
>SB_27495| Best HMM Match : VWA (HMM E-Value=0)
Length = 1064
Score = 31.1 bits (67), Expect = 1.1
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Frame = -3
Query: 446 DSISTQFGFVLSAIQLKHEFINLSLLGYFKVGFGKFRSNEFID-IFDCGQNSLAMIFTLD 270
+ + T F ++ +H F + GY + GF KFRS + +D + D + + +D
Sbjct: 633 EKLCTGFDVAERQLRKQHSFWFNDVCGYNQKGFRKFRSEQELDELLDKIEKTQDPQRRVD 692
Query: 269 VISQF--KSFMNTSGGTR 222
+F K F + GGTR
Sbjct: 693 KTFKFASKEFFSMEGGTR 710
>SB_41075| Best HMM Match : RVT_1 (HMM E-Value=2.1e-30)
Length = 1152
Score = 29.5 bits (63), Expect = 3.5
Identities = 35/128 (27%), Positives = 58/128 (45%), Gaps = 6/128 (4%)
Frame = +3
Query: 78 TLNLXKSSSVLKMVIKSI--KARQIFDSRGNPTVEVDLVTELGLFRAAVPSGASTGVHEA 251
TLNL + +K+ + I K ++F G E + + G AV + A GV
Sbjct: 372 TLNLVSVINSVKLTQEEICKKFSKLFKGLGKLDTEYHIELKDGAEPYAVHT-ARRGVISR 430
Query: 252 LELRDNIKSEYHGKGVLTAIKNINELIAPELTKANLEVTQQREI----DELMLKLDGTEN 419
+E + +++ V+ N I +LT+ N V ++R I DE + +L G +
Sbjct: 431 VE----VPTDWCAPMVVVPKSNDQVRICVDLTRLNDSVKRERHILPSVDETLAQLGGAKV 486
Query: 420 KSKLGANA 443
SKL AN+
Sbjct: 487 FSKLDANS 494
>SB_30236| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 353
Score = 28.7 bits (61), Expect = 6.1
Identities = 20/65 (30%), Positives = 28/65 (43%)
Frame = -1
Query: 724 ESNPNFSLMIFFKWWYTSEPILMASLKVDAPVGKIMNSCMASLFPACDPPLITLKAGTGR 545
ES F +I + W+ S IL + K D KIM S + FP D P +A
Sbjct: 244 ESKALFRTIITYPWFQNSSIILFLNKK-DLLEEKIMFSHLVEYFPEFDGPQCDAQAAREF 302
Query: 544 TISLF 530
+ +F
Sbjct: 303 ILKMF 307
>SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40)
Length = 892
Score = 28.7 bits (61), Expect = 6.1
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -1
Query: 808 WIAS*IR*RASLLFCMFGAKPPSSPTAVESNPNFSLMIFFK 686
W + ++ R LL C F P +SP+A+E N L +F K
Sbjct: 40 WASVKLKGRKELLLCSFYRVPNNSPSALEVLSNAILDVFNK 80
>SB_52809| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 104
Score = 28.7 bits (61), Expect = 6.1
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 732 VGDEGGFAPNIQNNKDALYLIQDAIXKAGY 821
V D+G ++P + + AL +QDA+ GY
Sbjct: 55 VTDDGSYSPPLDKPETALEYLQDAVSGCGY 84
>SB_51232| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1676
Score = 28.7 bits (61), Expect = 6.1
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -1
Query: 808 WIAS*IR*RASLLFCMFGAKPPSSPTAVESNPNFSLMIFFK 686
W + ++ R LL C F P +SP+A+E N L +F K
Sbjct: 292 WASVKLKGRKELLLCSFYRVPNNSPSALEVLSNAILDVFNK 332
>SB_21143| Best HMM Match : Myosin_tail_1 (HMM E-Value=0.42)
Length = 870
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +3
Query: 303 TAIKNINELIAPELTKANLEVTQQREIDELMLKLDGTENKS 425
TA KN+ + A ELT N + TQ+ + +L L TEN++
Sbjct: 679 TAKKNLEKARAAELTAVNQQATQREQ--QLTTLLQETENRN 717
>SB_28550| Best HMM Match : Fer2_2 (HMM E-Value=2.49992e-42)
Length = 1644
Score = 28.3 bits (60), Expect = 8.0
Identities = 38/159 (23%), Positives = 65/159 (40%), Gaps = 2/159 (1%)
Frame = +3
Query: 189 TELGLFRAAVPSGASTGVHEALELRDNIKSEYHGKGVLTAIKNINELIAPELTKANLEVT 368
T G+++ P V+ LEL +E G V+ + LI EL++AN+ +
Sbjct: 383 TGKGIYKKDGPFDVFIDVNNVLELHRT--TEVDGYFVVGGGVTLGSLI--ELSEANVSKS 438
Query: 369 QQ-REIDELMLKLDGTENKSKLGANAILGVSLXXXXXXXXX-XNVPLYKHLADLAGNNDI 542
R I E + + T ++++ ++G S+ NV +A + +
Sbjct: 439 PVFRAIAEHLKVVANTPVRNEVDGYFVVGGSVTLGSLIELSEANVSKSPVFPAIAEHLKV 498
Query: 543 VLPVPAFNVINGGSHAGNKLAMQEFMIFPTGASTFSEAM 659
V P NV GS AGN + + FP+ T E +
Sbjct: 499 VANTPVRNV---GSIAGNMMLAHDHSDFPSDIMTIMEGI 534
>SB_18551| Best HMM Match : RNA_pol_Rpc82 (HMM E-Value=0.69)
Length = 348
Score = 28.3 bits (60), Expect = 8.0
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = +3
Query: 267 NIKSEYHGKGVLTAIKNINELIAPELTK--ANLEVTQQRE 380
N+K+E+ G+ AI ++ EL+ P + L++TQ R+
Sbjct: 219 NLKAEHGGEAAADAISDLQELVTPAEREMLMKLKITQARQ 258
>SB_9773| Best HMM Match : TPR_2 (HMM E-Value=3.2e-06)
Length = 553
Score = 28.3 bits (60), Expect = 8.0
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +3
Query: 504 YKHLADLAGNNDIVLPVPAFNVING-GSHAGNKLAMQE 614
Y HL+ + +D+ LPV +N+ +G G G+ +A+ E
Sbjct: 268 YLHLSRVKDKSDLCLPVTVYNMASGAGFVVGDAIAIPE 305
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,143,532
Number of Sequences: 59808
Number of extensions: 499321
Number of successful extensions: 1148
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1051
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1147
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2323539746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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