Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_A04
(829 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68318-8|CAH10783.1| 465|Caenorhabditis elegans Hypothetical pr... 341 5e-94
Z68318-2|CAA92692.1| 434|Caenorhabditis elegans Hypothetical pr... 340 9e-94
Z68318-3|CAD57704.1| 337|Caenorhabditis elegans Hypothetical pr... 179 2e-45
U56864-1|AAB04059.1| 355|Caenorhabditis elegans EGL-30 protein. 28 7.1
AY008139-1|AAG32092.1| 355|Caenorhabditis elegans heterotrimeri... 28 7.1
AF003739-2|AAM15593.1| 303|Caenorhabditis elegans Egg laying de... 28 7.1
AF003739-1|AAB58071.1| 355|Caenorhabditis elegans Egg laying de... 28 7.1
Z81527-14|CAB04278.2| 506|Caenorhabditis elegans Hypothetical p... 28 9.4
Z79753-8|CAB02089.2| 506|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z50016-1|CAA90318.1| 1106|Caenorhabditis elegans Hypothetical pr... 28 9.4
>Z68318-8|CAH10783.1| 465|Caenorhabditis elegans Hypothetical
protein T21B10.2c protein.
Length = 465
Score = 341 bits (837), Expect = 5e-94
Identities = 165/239 (69%), Positives = 191/239 (79%)
Frame = +3
Query: 111 KMVIKSIKARQIFDSRGNPTVEVDLVTELGLFRAAVPSGASTGVHEALELRDNIKSEYHG 290
+M I I ARQI+DSRGNPTVEVDL TE G+FRAAVPSGASTGVHEALELRD K+ + G
Sbjct: 31 RMPITKIHARQIYDSRGNPTVEVDLFTEKGVFRAAVPSGASTGVHEALELRDGDKAVHLG 90
Query: 291 KGVLTAIKNINELIAPELTKANLEVTQQREIDELMLKLDGTENKSKLGANAILGVSLXXX 470
KGVL A+ NINE IAP L +VT Q++ID+ M+ LDG+ENK LGANAILGVSL
Sbjct: 91 KGVLKAVSNINEKIAPALIAKGFDVTAQKDIDDFMMALDGSENKGNLGANAILGVSLAVA 150
Query: 471 XXXXXXXNVPLYKHLADLAGNNDIVLPVPAFNVINGGSHAGNKLAMQEFMIFPTGASTFS 650
+PLYK++A+LAG +VLPVPAFNVINGGSHAGNKLAMQEFMI P GAS+F+
Sbjct: 151 KAGAVHKGLPLYKYIAELAGTGKVVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFA 210
Query: 651 EAMRMGSEVYHHLKKIIKEKFGLDSTAVGDEGGFAPNIQNNKDALYLIQDAIXKAGYAG 827
EAMRMGSEVYHHLK IK+++GLD+TAVGDEGGFAPNIQ+NK+ L L+ AI KAGY G
Sbjct: 211 EAMRMGSEVYHHLKAEIKKRYGLDATAVGDEGGFAPNIQDNKEGLDLLNTAIDKAGYTG 269
>Z68318-2|CAA92692.1| 434|Caenorhabditis elegans Hypothetical
protein T21B10.2a protein.
Length = 434
Score = 340 bits (835), Expect = 9e-94
Identities = 165/238 (69%), Positives = 190/238 (79%)
Frame = +3
Query: 114 MVIKSIKARQIFDSRGNPTVEVDLVTELGLFRAAVPSGASTGVHEALELRDNIKSEYHGK 293
M I I ARQI+DSRGNPTVEVDL TE G+FRAAVPSGASTGVHEALELRD K+ + GK
Sbjct: 1 MPITKIHARQIYDSRGNPTVEVDLFTEKGVFRAAVPSGASTGVHEALELRDGDKAVHLGK 60
Query: 294 GVLTAIKNINELIAPELTKANLEVTQQREIDELMLKLDGTENKSKLGANAILGVSLXXXX 473
GVL A+ NINE IAP L +VT Q++ID+ M+ LDG+ENK LGANAILGVSL
Sbjct: 61 GVLKAVSNINEKIAPALIAKGFDVTAQKDIDDFMMALDGSENKGNLGANAILGVSLAVAK 120
Query: 474 XXXXXXNVPLYKHLADLAGNNDIVLPVPAFNVINGGSHAGNKLAMQEFMIFPTGASTFSE 653
+PLYK++A+LAG +VLPVPAFNVINGGSHAGNKLAMQEFMI P GAS+F+E
Sbjct: 121 AGAVHKGLPLYKYIAELAGTGKVVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFAE 180
Query: 654 AMRMGSEVYHHLKKIIKEKFGLDSTAVGDEGGFAPNIQNNKDALYLIQDAIXKAGYAG 827
AMRMGSEVYHHLK IK+++GLD+TAVGDEGGFAPNIQ+NK+ L L+ AI KAGY G
Sbjct: 181 AMRMGSEVYHHLKAEIKKRYGLDATAVGDEGGFAPNIQDNKEGLDLLNTAIDKAGYTG 238
>Z68318-3|CAD57704.1| 337|Caenorhabditis elegans Hypothetical
protein T21B10.2b protein.
Length = 337
Score = 179 bits (436), Expect = 2e-45
Identities = 90/143 (62%), Positives = 105/143 (73%)
Frame = +3
Query: 114 MVIKSIKARQIFDSRGNPTVEVDLVTELGLFRAAVPSGASTGVHEALELRDNIKSEYHGK 293
M I I ARQI+DSRGNPTVEVDL TE G+FRAAVPSGASTGVHEALELRD K+ + GK
Sbjct: 1 MPITKIHARQIYDSRGNPTVEVDLFTEKGVFRAAVPSGASTGVHEALELRDGDKAVHLGK 60
Query: 294 GVLTAIKNINELIAPELTKANLEVTQQREIDELMLKLDGTENKSKLGANAILGVSLXXXX 473
GVL A+ NINE IAP L +VT Q++ID+ M+ LDG+ENK LGANAILGVSL
Sbjct: 61 GVLKAVSNINEKIAPALIAKGFDVTAQKDIDDFMMALDGSENKGNLGANAILGVSLAVAK 120
Query: 474 XXXXXXNVPLYKHLADLAGNNDI 542
+PLYK++A+LAG I
Sbjct: 121 AGAVHKGLPLYKYIAELAGTGKI 143
>U56864-1|AAB04059.1| 355|Caenorhabditis elegans EGL-30 protein.
Length = 355
Score = 28.3 bits (60), Expect = 7.1
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = -1
Query: 724 ESNPNFSLMIFFKWWYTSEPILMASLKVDAPVGKIMNSCMASLFPACDPP 575
ES F +I + W+ S IL + K D KI+ S +A FP D P
Sbjct: 246 ESKALFRTIITYPWFTNSSVILFLNKK-DLLEEKILYSHLADYFPEYDGP 294
>AY008139-1|AAG32092.1| 355|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 355
Score = 28.3 bits (60), Expect = 7.1
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = -1
Query: 724 ESNPNFSLMIFFKWWYTSEPILMASLKVDAPVGKIMNSCMASLFPACDPP 575
ES F +I + W+ S IL + K D KI+ S +A FP D P
Sbjct: 246 ESKALFRTIITYPWFTNSSVILFLNKK-DLLEEKILYSHLADYFPEYDGP 294
>AF003739-2|AAM15593.1| 303|Caenorhabditis elegans Egg laying
defective protein 30,isoform b protein.
Length = 303
Score = 28.3 bits (60), Expect = 7.1
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = -1
Query: 724 ESNPNFSLMIFFKWWYTSEPILMASLKVDAPVGKIMNSCMASLFPACDPP 575
ES F +I + W+ S IL + K D KI+ S +A FP D P
Sbjct: 194 ESKALFRTIITYPWFTNSSVILFLNKK-DLLEEKILYSHLADYFPEYDGP 242
>AF003739-1|AAB58071.1| 355|Caenorhabditis elegans Egg laying
defective protein 30,isoform a protein.
Length = 355
Score = 28.3 bits (60), Expect = 7.1
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = -1
Query: 724 ESNPNFSLMIFFKWWYTSEPILMASLKVDAPVGKIMNSCMASLFPACDPP 575
ES F +I + W+ S IL + K D KI+ S +A FP D P
Sbjct: 246 ESKALFRTIITYPWFTNSSVILFLNKK-DLLEEKILYSHLADYFPEYDGP 294
>Z81527-14|CAB04278.2| 506|Caenorhabditis elegans Hypothetical
protein F35E12.8 protein.
Length = 506
Score = 27.9 bits (59), Expect = 9.4
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = -3
Query: 233 GGTRGYSCPEQAKLCYQINFHCRVATRVKD 144
GGT + A+ + IN+HC++ +++D
Sbjct: 35 GGTGTFPPDSAARFQFPINYHCKIQFKIQD 64
>Z79753-8|CAB02089.2| 506|Caenorhabditis elegans Hypothetical
protein F35E12.8 protein.
Length = 506
Score = 27.9 bits (59), Expect = 9.4
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = -3
Query: 233 GGTRGYSCPEQAKLCYQINFHCRVATRVKD 144
GGT + A+ + IN+HC++ +++D
Sbjct: 35 GGTGTFPPDSAARFQFPINYHCKIQFKIQD 64
>Z50016-1|CAA90318.1| 1106|Caenorhabditis elegans Hypothetical
protein T21C12.1a protein.
Length = 1106
Score = 27.9 bits (59), Expect = 9.4
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 6/54 (11%)
Frame = -1
Query: 772 LFCMFGA-KPPSSPTAVESNPNFSLM-----IFFKWWYTSEPILMASLKVDAPV 629
+FCM KPPS T+ S+ + + I +KW + EP ++K DA +
Sbjct: 822 VFCMLAVTKPPSRMTSSSSSTSSTYAYSTAEIEYKWCTSKEPNCSTAVKADANI 875
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,678,060
Number of Sequences: 27780
Number of extensions: 379025
Number of successful extensions: 1058
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1007
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1058
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2050970610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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