Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_A04
         (829 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g74030.1 68414.m08573 enolase, putative similar to Swiss-Prot...   322   1e-88
At2g36530.1 68415.m04481 enolase identical to SWISS-PROT:P25696 ...   297   6e-81
At2g29560.1 68415.m03590 enolase, putative similar to enolase [S...   247   6e-66
At1g32340.1 68414.m03985 zinc finger (C3HC4-type RING finger) fa...    29   2.8  
At3g45940.1 68416.m04971 alpha-xylosidase, putative strong simil...    29   3.8  
At3g55110.1 68416.m06120 ABC transporter family protein ATP-bind...    29   5.0  
At1g64050.1 68414.m07255 expressed protein                             28   6.6  

>At1g74030.1 68414.m08573 enolase, putative similar to
           Swiss-Prot:P15007 enolase (EC 4.2.1.11)
           (2-phosphoglycerate dehydratase)(2-phospho-D- glycerate
           hydro-lyase) [Drosophila melanogaster]
          Length = 477

 Score =  322 bits (792), Expect = 1e-88
 Identities = 157/236 (66%), Positives = 188/236 (79%)
 Frame = +3

Query: 120 IKSIKARQIFDSRGNPTVEVDLVTELGLFRAAVPSGASTGVHEALELRDNIKSEYHGKGV 299
           +K +KARQI DSRGNPTVEVDL+T+  L+R+AVPSGASTG++EALELRD  KS Y GKGV
Sbjct: 51  VKGVKARQIIDSRGNPTVEVDLITD-DLYRSAVPSGASTGIYEALELRDGDKSVYGGKGV 109

Query: 300 LTAIKNINELIAPELTKANLEVTQQREIDELMLKLDGTENKSKLGANAILGVSLXXXXXX 479
           L AIKNINEL+AP+L    ++V  Q ++D LML+LDGT NKSKLGANAILGVSL      
Sbjct: 110 LQAIKNINELVAPKLI--GVDVRNQADVDALMLELDGTPNKSKLGANAILGVSLSVCRAG 167

Query: 480 XXXXNVPLYKHLADLAGNNDIVLPVPAFNVINGGSHAGNKLAMQEFMIFPTGASTFSEAM 659
                VPLYKH+ + +G  ++V+PVPAFNVINGGSHAGN LAMQEFMI P GA++FSEA 
Sbjct: 168 AGAKGVPLYKHIQETSGTKELVMPVPAFNVINGGSHAGNSLAMQEFMILPVGATSFSEAF 227

Query: 660 RMGSEVYHHLKKIIKEKFGLDSTAVGDEGGFAPNIQNNKDALYLIQDAIXKAGYAG 827
           +MGSEVYH LK IIK K+G D+  VGDEGGFAPN+Q+N++ L L+ DAI KAGY G
Sbjct: 228 QMGSEVYHTLKGIIKTKYGQDACNVGDEGGFAPNVQDNREGLVLLIDAIEKAGYTG 283


>At2g36530.1 68415.m04481 enolase identical to SWISS-PROT:P25696
           enolase (EC 4.2.1.11) (2-phosphoglycerate
           dehydratase)(2-phospho-D- glycerate hydro-lyase)
           [Arabidopsis thaliana]
          Length = 444

 Score =  297 bits (729), Expect = 6e-81
 Identities = 155/243 (63%), Positives = 181/243 (74%), Gaps = 7/243 (2%)
 Frame = +3

Query: 120 IKSIKARQIFDSRGNPTVEVDLVTELGL-FRAAVPSGASTGVHEALELRDNIKSEYHGKG 296
           I  +KARQIFDSRGNPTVEVD+ T  G+   AAVPSGASTG++EALELRD   S+Y GKG
Sbjct: 4   ITVVKARQIFDSRGNPTVEVDIHTSNGIKVTAAVPSGASTGIYEALELRDG-GSDYLGKG 62

Query: 297 VLTAIKNINELIAPELTKANLEVTQQREIDELML-KLDGTEN-----KSKLGANAILGVS 458
           V  A+ N+N +I P L     + TQQ  ID  M+ +LDGT+N     K KLGANAIL VS
Sbjct: 63  VSKAVGNVNNIIGPALI--GKDPTQQTAIDNFMVHELDGTQNEWGWCKQKLGANAILAVS 120

Query: 459 LXXXXXXXXXXNVPLYKHLADLAGNNDIVLPVPAFNVINGGSHAGNKLAMQEFMIFPTGA 638
           L           +PLYKH+A+LAGN  IVLPVPAFNVINGGSHAGNKLAMQEFMI P GA
Sbjct: 121 LAVCKAGAVVSGIPLYKHIANLAGNPKIVLPVPAFNVINGGSHAGNKLAMQEFMILPVGA 180

Query: 639 STFSEAMRMGSEVYHHLKKIIKEKFGLDSTAVGDEGGFAPNIQNNKDALYLIQDAIXKAG 818
           ++F EAM+MG EVYHHLK +IK+K+G D+T VGDEGGFAPNIQ NK+ L L++ AI KAG
Sbjct: 181 ASFKEAMKMGVEVYHHLKSVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLKTAIEKAG 240

Query: 819 YAG 827
           Y G
Sbjct: 241 YTG 243


>At2g29560.1 68415.m03590 enolase, putative similar to enolase
           [Spinacia oleracea] gi|8919731|emb|CAB96173
          Length = 475

 Score =  247 bits (605), Expect = 6e-66
 Identities = 126/235 (53%), Positives = 160/235 (68%)
 Frame = +3

Query: 117 VIKSIKARQIFDSRGNPTVEVDLVTELGLFRAAVPSGASTGVHEALELRDNIKSEYHGKG 296
           VI  +KARQI DSRG PTVEVDL T  G+FRA+VPSG S+G +EA+ELRD  K  Y G  
Sbjct: 46  VITKVKARQILDSRGIPTVEVDLHTNKGVFRASVPSGDSSGTYEAIELRDGDKGMYLGNS 105

Query: 297 VLTAIKNINELIAPELTKANLEVTQQREIDELMLKLDGTENKSKLGANAILGVSLXXXXX 476
           V  A+KNINE I+  L    ++   Q +ID+ M+ LD TE KS+LGANAIL VS+     
Sbjct: 106 VAKAVKNINEKISEALI--GMDPKLQGQIDQAMIDLDKTEKKSELGANAILAVSIAACKA 163

Query: 477 XXXXXNVPLYKHLADLAGNNDIVLPVPAFNVINGGSHAGNKLAMQEFMIFPTGASTFSEA 656
                 VPL KHL+DL+G  ++VLPVPAF V++GG HA N  A+QE MI P GAS F EA
Sbjct: 164 GAAEKEVPLCKHLSDLSGRANMVLPVPAFTVLSGGKHASNTFAIQEIMILPIGASRFEEA 223

Query: 657 MRMGSEVYHHLKKIIKEKFGLDSTAVGDEGGFAPNIQNNKDALYLIQDAIXKAGY 821
           ++ GSE YHHLK +I EK G     VG++GG AP+I + K+ L L+++AI + GY
Sbjct: 224 LQWGSETYHHLKAVISEKNGGLGCNVGEDGGLAPDISSLKEGLELVKEAINRTGY 278


>At1g32340.1 68414.m03985 zinc finger (C3HC4-type RING finger)
           family protein contains a Zinc finger, C3HC4 type (RING
           finger) signature, PROSITE:PS00518
          Length = 688

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
 Frame = +3

Query: 246 EALELRDNIKSEYHGKG--VLTAIKNINELIA-PELTKANLEVTQQREIDELM 395
           E+ E+ D +  EY  K   +LT +K++   ++ PELT+  L++  Q + DEL+
Sbjct: 143 ESEEIADGV-DEYETKEDIMLTILKDLRSSVSEPELTEEQLKMNDQLQEDELL 194


>At3g45940.1 68416.m04971 alpha-xylosidase, putative strong
           similarity to alpha-xylosidase precursor GI:4163997 from
           [Arabidopsis thaliana]
          Length = 868

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = +3

Query: 546 LPVPAFNVINGGSHAGNKLAMQEFMIFPTGAS 641
           LP P FNV+N   +    L MQ+ + FP GAS
Sbjct: 690 LPAP-FNVVNVHLYQNAILPMQQVVAFPAGAS 720


>At3g55110.1 68416.m06120 ABC transporter family protein ATP-binding
           cassette-sub-family G-member 2, Mus musculus,
           EMBL:AF140218
          Length = 708

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 16/71 (22%), Positives = 30/71 (42%)
 Frame = +3

Query: 147 FDSRGNPTVEVDLVTELGLFRAAVPSGASTGVHEALELRDNIKSEYHGKGVLTAIKNINE 326
           F S G P  E + +TE  L       G+S G  + +E  +  +     +    +  ++ E
Sbjct: 308 FSSFGRPIPEKENITEFALDVIRELEGSSEGTRDLVEFNEKWQQNQTARATTQSRVSLKE 367

Query: 327 LIAPELTKANL 359
            IA  +++  L
Sbjct: 368 AIAASVSRGKL 378


>At1g64050.1 68414.m07255 expressed protein
          Length = 668

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = -1

Query: 241 TPVEAPEGTAARNKPSSVTRSTSTVGLPRESKI 143
           +P+ +PE   +  K   ++RS+S  G PR +K+
Sbjct: 107 SPIASPESAESPRKRGKLSRSSSGNGTPRRTKL 139


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,824,298
Number of Sequences: 28952
Number of extensions: 357726
Number of successful extensions: 891
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 867
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 885
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1902108000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)