Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_A03
(881 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g19730.1 68414.m02465 thioredoxin H-type 4 (TRX-H-4) (GREN) i... 71 8e-13
At1g69880.1 68414.m08042 thioredoxin, putative similar to SP|Q38... 69 4e-12
At3g17880.1 68416.m02278 tetratricoredoxin (TDX) identical to te... 68 1e-11
At1g43560.1 68414.m05000 thioredoxin family protein contains Pfa... 68 1e-11
At5g39950.1 68418.m04844 thioredoxin H-type 2 (TRX-H-2) (Gif2) i... 66 2e-11
At3g08710.1 68416.m01012 thioredoxin family protein similar to t... 64 1e-10
At3g51030.1 68416.m05587 thioredoxin H-type 1 (TRX-H-1) identica... 64 2e-10
At1g76760.1 68414.m08933 thioredoxin family protein similar to t... 64 2e-10
At5g16400.1 68418.m01917 thioredoxin, putative similar to SP|P29... 62 4e-10
At1g59730.1 68414.m06725 thioredoxin, putative similar to SP|Q38... 62 6e-10
At1g45145.1 68414.m05175 thioredoxin H-type 5 (TRX-H-5) (TOUL) i... 61 8e-10
At3g15360.1 68416.m01948 thioredoxin M-type 4, chloroplast (TRX-... 61 1e-09
At3g02730.1 68416.m00265 thioredoxin, putative similar to SP|P29... 61 1e-09
At5g42980.1 68418.m05242 thioredoxin H-type 3 (TRX-H-3) (GIF1) i... 58 8e-09
At1g03680.1 68414.m00347 thioredoxin M-type 1, chloroplast (TRX-... 58 8e-09
At4g03520.1 68417.m00480 thioredoxin M-type 2, chloroplast (TRX-... 54 1e-07
At2g15570.1 68415.m01783 thioredoxin M-type 3, chloroplast (TRX-... 53 2e-07
At1g50320.1 68414.m05641 thioredoxin x nearly identical to thior... 51 9e-07
At4g26160.1 68417.m03765 thioredoxin family protein low similari... 50 2e-06
At2g40790.1 68415.m05032 thioredoxin family protein contains Pfa... 49 5e-06
At2g35010.1 68415.m04295 thioredoxin family protein similar to S... 47 2e-05
At2g33270.1 68415.m04078 thioredoxin family protein contains Pfa... 46 3e-05
At4g29670.2 68417.m04227 thioredoxin family protein contains Pfa... 46 4e-05
At4g29670.1 68417.m04226 thioredoxin family protein contains Pfa... 46 4e-05
At1g31020.1 68414.m03798 thioredoxin o (TRXO2) similar to thiore... 45 8e-05
At1g08570.1 68414.m00950 thioredoxin family protein contains Pfa... 45 8e-05
At5g61440.1 68418.m07709 thioredoxin family protein low similari... 44 2e-04
At3g56420.1 68416.m06275 thioredoxin family protein similar to t... 44 2e-04
At3g06730.1 68416.m00798 thioredoxin family protein contains Pfa... 43 2e-04
At1g11530.1 68414.m01324 thioredoxin family protein similar to t... 42 4e-04
At1g77510.1 68414.m09026 protein disulfide isomerase, putative s... 42 7e-04
At2g32920.1 68415.m04036 thioredoxin family protein similar to S... 41 0.001
At1g52990.1 68414.m05997 thioredoxin family protein similar to S... 41 0.001
At1g21750.2 68414.m02723 protein disulfide isomerase, putative s... 40 0.002
At1g21750.1 68414.m02722 protein disulfide isomerase, putative s... 40 0.002
At1g04980.1 68414.m00497 thioredoxin family protein similar to S... 40 0.003
At1g35620.1 68414.m04425 thioredoxin family protein similar to S... 39 0.005
At5g04260.1 68418.m00417 thioredoxin family protein low similari... 38 0.009
At5g60640.2 68418.m07611 thioredoxin family protein similar to p... 38 0.012
At5g60640.1 68418.m07610 thioredoxin family protein similar to p... 38 0.012
At5g06690.1 68418.m00756 thioredoxin family protein low similiar... 38 0.012
At4g04950.1 68417.m00719 thioredoxin family protein similar to P... 38 0.012
At1g76080.1 68414.m08835 thioredoxin family protein low similari... 37 0.016
At3g54960.1 68416.m06094 thioredoxin family protein similar to p... 37 0.021
At3g53220.1 68416.m05864 thioredoxin family protein low similari... 37 0.021
At2g47470.2 68415.m05924 thioredoxin family protein similar to p... 36 0.027
At2g47470.1 68415.m05925 thioredoxin family protein similar to p... 36 0.027
At1g07960.3 68414.m00867 thioredoxin family protein low similari... 36 0.027
At1g07960.2 68414.m00866 thioredoxin family protein low similari... 36 0.027
At1g07960.1 68414.m00865 thioredoxin family protein low similari... 36 0.027
At4g32580.1 68417.m04638 thioredoxin family protein contains Pfa... 36 0.036
At1g60420.1 68414.m06802 DC1 domain-containing protein contains ... 34 0.11
At1g07700.3 68414.m00829 thioredoxin family protein low similari... 33 0.19
At1g07700.1 68414.m00828 thioredoxin family protein low similari... 33 0.19
At3g03860.1 68416.m00398 expressed protein 32 0.44
At2g41680.1 68415.m05149 thioredoxin reductase, putative / NADPH... 32 0.58
At1g43100.1 68414.m04965 glycoside hydrolase family 28 protein /... 31 1.0
At1g43090.1 68414.m04964 glycoside hydrolase family 28 protein /... 31 1.0
At5g61340.1 68418.m07697 expressed protein 30 1.8
At5g60620.1 68418.m07608 phospholipid/glycerol acyltransferase f... 29 3.1
At1g43080.1 68414.m04963 glycoside hydrolase family 28 protein /... 29 3.1
At1g07700.2 68414.m00827 thioredoxin family protein low similari... 29 4.1
At2g26620.1 68415.m03194 glycoside hydrolase family 28 protein /... 29 5.4
At4g30290.1 68417.m04305 xyloglucan:xyloglucosyl transferase, pu... 28 7.2
At4g30280.1 68417.m04304 xyloglucan:xyloglucosyl transferase, pu... 28 7.2
At1g65310.1 68414.m07406 xyloglucan:xyloglucosyl transferase, pu... 28 7.2
At4g31240.2 68417.m04435 expressed protein 28 9.5
At4g31240.1 68417.m04434 expressed protein 28 9.5
At4g13760.1 68417.m02135 glycoside hydrolase family 28 protein /... 28 9.5
At2g27410.1 68415.m03312 hypothetical protein contains Pfam prof... 28 9.5
>At1g19730.1 68414.m02465 thioredoxin H-type 4 (TRX-H-4) (GREN)
identical to SP|Q39239 Thioredoxin H-type 4 (TRX-H-4)
{Arabidopsis thaliana}
Length = 119
Score = 71.3 bits (167), Expect = 8e-13
Identities = 32/91 (35%), Positives = 50/91 (54%)
Frame = +1
Query: 127 HIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXX 306
H D ++ A+ +KL+VIDF A+WC PC+MI P +++A +
Sbjct: 12 HTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAIFFKVDVDEL 71
Query: 307 XXXASEYNINSMPTFVFVKNGKKLDEFSGAN 399
A E+ + +MPTFVF+K G+ +D+ GAN
Sbjct: 72 QSVAKEFGVEAMPTFVFIKAGEVVDKLVGAN 102
>At1g69880.1 68414.m08042 thioredoxin, putative similar to SP|Q38879
Thioredoxin H-type 2 (TRX-H-2) {Arabidopsis thaliana};
contains Pfam profile: PF00085 Thioredoxin
Length = 148
Score = 68.9 bits (161), Expect = 4e-12
Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
Frame = +1
Query: 124 IHIKDSDDLKTRLAEAGD--KLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXX 297
+ IK+ + K+RL D KL+VI+F A WCGPCK + PKL+E+AA+
Sbjct: 40 VEIKNMNQWKSRLNALKDTNKLLVIEFTAKWCGPCKTLEPKLEELAAKYTDVEFVKIDVD 99
Query: 298 XXXXXXASEYNINSMPTFVFVKNGKKLDEFSGANVD 405
E+N++++P VF+K G+++D G VD
Sbjct: 100 VLMSVW-MEFNLSTLPAIVFMKRGREVDMVVGVKVD 134
>At3g17880.1 68416.m02278 tetratricoredoxin (TDX) identical to
tetratricoredoxin [Arabidopsis thaliana] GI:18041544;
similar to SP|Q42443 Thioredoxin H-type (TRX-H) (Phloem
sap 13 kDa protein-1) {Oryza sativa}; contains Pfam
profile: PF00085 Thioredoxin
Length = 380
Score = 67.7 bits (158), Expect = 1e-11
Identities = 31/94 (32%), Positives = 53/94 (56%)
Frame = +1
Query: 118 MSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXX 297
+SIH + KT+ A+ +L+++ F ATWCGPC+ + P +A +
Sbjct: 273 ISIHSTSELEAKTKAAKKASRLLILYFTATWCGPCRYMSPLYSNLATQHSRVVFLKVDID 332
Query: 298 XXXXXXASEYNINSMPTFVFVKNGKKLDEFSGAN 399
AS +NI+S+PTF F+++GK++D+ GA+
Sbjct: 333 KANDVAAS-WNISSVPTFCFIRDGKEVDKVVGAD 365
>At1g43560.1 68414.m05000 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin; similar to thioredoxin
GI:142153 from [Synechococcus PCC6301]
Length = 167
Score = 67.7 bits (158), Expect = 1e-11
Identities = 29/79 (36%), Positives = 45/79 (56%)
Frame = +1
Query: 160 LAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINS 339
L + DK V++DF ATWCGPC+++ P L+E++ + A++Y I +
Sbjct: 71 LLQNSDKPVLVDFYATWCGPCQLMVPILNEVSETLKDIIAVVKIDTEKYPSLANKYQIEA 130
Query: 340 MPTFVFVKNGKKLDEFSGA 396
+PTF+ K+GK D F GA
Sbjct: 131 LPTFILFKDGKLWDRFEGA 149
>At5g39950.1 68418.m04844 thioredoxin H-type 2 (TRX-H-2) (Gif2)
identical to SP|Q38879 Thioredoxin H-type 2 (TRX-H-2)
{Arabidopsis thaliana}; identical to cDNA (Gif2) mRNA
for thioredoxin GI:992963
Length = 133
Score = 66.5 bits (155), Expect = 2e-11
Identities = 30/77 (38%), Positives = 44/77 (57%)
Frame = +1
Query: 175 DKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFV 354
+KL+V+DF A+WCGPC+MI P + + A+ A E+N+ +MPTFV
Sbjct: 47 NKLLVVDFSASWCGPCRMIEPAIHAM-ADKFNDVDFVKLDVDELPDVAKEFNVTAMPTFV 105
Query: 355 FVKNGKKLDEFSGANVD 405
VK GK+++ GA D
Sbjct: 106 LVKRGKEIERIIGAKKD 122
>At3g08710.1 68416.m01012 thioredoxin family protein similar to
thioredoxin H-type GB:P29448 SP|P29448 [Arabidopsis
thaliana], Thioredoxin H-type 2 (TRX-H2) SP|Q07090
{Nicotiana tabacum}; contains Pfam profile: PF00085
Thioredoxin
Length = 140
Score = 64.1 bits (149), Expect = 1e-10
Identities = 33/92 (35%), Positives = 50/92 (54%)
Frame = +1
Query: 124 IHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXX 303
I K+S D K A+ K+VV +F ATWCGPCK++ P E+ +E
Sbjct: 28 ITTKESWDDKLAEADRDGKIVVANFSATWCGPCKIVAPFFIEL-SEKHSSLMFLLVDVDE 86
Query: 304 XXXXASEYNINSMPTFVFVKNGKKLDEFSGAN 399
+S ++I + PTF F+KNG+++ + GAN
Sbjct: 87 LSDFSSSWDIKATPTFFFLKNGQQIGKLVGAN 118
>At3g51030.1 68416.m05587 thioredoxin H-type 1 (TRX-H-1) identical
to SP|P29448 Thioredoxin H-type 1 (TRX-H-1) {Arabidopsis
thaliana}
Length = 114
Score = 63.7 bits (148), Expect = 2e-10
Identities = 32/96 (33%), Positives = 52/96 (54%)
Frame = +1
Query: 118 MSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXX 297
++ H ++ + + + A LVV+DF A+WCGPC+ I P ++A ++
Sbjct: 9 IACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKL-PNVLFLKVDT 67
Query: 298 XXXXXXASEYNINSMPTFVFVKNGKKLDEFSGANVD 405
AS++ I +MPTF+F+K GK LD+ GA D
Sbjct: 68 DELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKD 103
>At1g76760.1 68414.m08933 thioredoxin family protein similar to
thioredoxin CH2, M-type, chloroplast precursor GB:P23400
SP|P23400 [Chlamydomonas reinhardtii]; contains Pfam
profile: PF00085 Thioredoxin
Length = 172
Score = 63.7 bits (148), Expect = 2e-10
Identities = 26/74 (35%), Positives = 42/74 (56%)
Frame = +1
Query: 175 DKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFV 354
DK V++D+ ATWCGPC+ + P L+E++ + A++Y I ++PTF+
Sbjct: 81 DKPVLVDYYATWCGPCQFMVPILNEVSETLKDKIQVVKIDTEKYPSIANKYKIEALPTFI 140
Query: 355 FVKNGKKLDEFSGA 396
K+G+ D F GA
Sbjct: 141 LFKDGEPCDRFEGA 154
>At5g16400.1 68418.m01917 thioredoxin, putative similar to SP|P29450
Thioredoxin F-type, chloroplast precursor (TRX-F) {Pisum
sativum}; contains Pfam profile: PF00085 Thioredoxin
Length = 185
Score = 62.5 bits (145), Expect = 4e-10
Identities = 30/90 (33%), Positives = 43/90 (47%)
Frame = +1
Query: 136 DSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXX 315
D D + AGDK+VV+D WCGPCK+I PK E++ +
Sbjct: 84 DKDTFWPIVKAAGDKIVVLDMYTQWCGPCKVIAPKYKELSEKYQDMVFLKLDCNQDNKPL 143
Query: 316 ASEYNINSMPTFVFVKNGKKLDEFSGANVD 405
A E I +PTF +K+ K + E +GA +
Sbjct: 144 AKELGIRVVPTFKILKDNKVVKEVTGAKYE 173
>At1g59730.1 68414.m06725 thioredoxin, putative similar to SP|Q38879
Thioredoxin H-type 2 (TRX-H-2) {Arabidopsis thaliana};
contains Pfam profile: PF00085 Thioredoxin
Length = 129
Score = 61.7 bits (143), Expect = 6e-10
Identities = 30/80 (37%), Positives = 43/80 (53%)
Frame = +1
Query: 166 EAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMP 345
+ +KL+VIDF A WCGPCK + P++ EIA++ A Y ++P
Sbjct: 40 KGSNKLLVIDFTAVWCGPCKAMEPRVREIASK-YSEAVFARVDVDRLMDVAGTYRAITLP 98
Query: 346 TFVFVKNGKKLDEFSGANVD 405
FVFVK G+++D GA D
Sbjct: 99 AFVFVKRGEEIDRVVGAKPD 118
>At1g45145.1 68414.m05175 thioredoxin H-type 5 (TRX-H-5) (TOUL)
identical to SP|Q39241 Thioredoxin H-type 5 (TRX-H-5)
{Arabidopsis thaliana}; identical to cDNA (TOUL) mRNA
for thioredoxin GI:992965
Length = 118
Score = 61.3 bits (142), Expect = 8e-10
Identities = 31/85 (36%), Positives = 42/85 (49%)
Frame = +1
Query: 151 KTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYN 330
K + A KL+VIDF A+WC PC+ I P E+A + A E+
Sbjct: 19 KVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKF-TNVVFFKIDVDELQAVAQEFK 77
Query: 331 INSMPTFVFVKNGKKLDEFSGANVD 405
+ +MPTFVF+K G +D GA D
Sbjct: 78 VEAMPTFVFMKEGNIIDRVVGAAKD 102
>At3g15360.1 68416.m01948 thioredoxin M-type 4, chloroplast (TRX-M4)
nearly identical to SP|Q9SEU6 Thioredoxin M-type 4,
chloroplast precursor (TRX-M4) {Arabidopsis thaliana}
Length = 193
Score = 60.9 bits (141), Expect = 1e-09
Identities = 30/90 (33%), Positives = 49/90 (54%)
Frame = +1
Query: 127 HIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXX 306
++ DS+ +T++ E+ D V+++F A WCGPC+MI P +D++A +
Sbjct: 90 NLSDSE-WQTKVLES-DVPVLVEFWAPWCGPCRMIHPIVDQLAKDFAGKFKFYKINTDES 147
Query: 307 XXXASEYNINSMPTFVFVKNGKKLDEFSGA 396
A+ Y I S+PT + K G+K D GA
Sbjct: 148 PNTANRYGIRSVPTVIIFKGGEKKDSIIGA 177
>At3g02730.1 68416.m00265 thioredoxin, putative similar to SP|P29450
Thioredoxin F-type, chloroplast precursor (TRX-F) {Pisum
sativum}; contains Pfam profile: PF00085 Thioredoxin
Length = 178
Score = 60.9 bits (141), Expect = 1e-09
Identities = 30/90 (33%), Positives = 42/90 (46%)
Frame = +1
Query: 136 DSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXX 315
D D + AG+KLVV+D WCGPCK+I PK ++ +
Sbjct: 74 DKDTFWPIVKAAGEKLVVLDMYTQWCGPCKVIAPKYKALSEKYDDVVFLKLDCNPDNRPL 133
Query: 316 ASEYNINSMPTFVFVKNGKKLDEFSGANVD 405
A E I +PTF +K+ K + E +GA D
Sbjct: 134 AKELGIRVVPTFKILKDNKVVKEVTGAKYD 163
>At5g42980.1 68418.m05242 thioredoxin H-type 3 (TRX-H-3) (GIF1)
identical to SP|Q42403 Thioredoxin H-type 3 (TRX-H-3)
{Arabidopsis thaliana}; identical to cDNA (GIF1) mRNA
for thioredoxin GI:992961
Length = 118
Score = 58.0 bits (134), Expect = 8e-09
Identities = 28/82 (34%), Positives = 41/82 (50%)
Frame = +1
Query: 151 KTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYN 330
K + A KL+VIDF ATWC PC+ I P ++ A+ A E+
Sbjct: 19 KLKAANESKKLIVIDFTATWCPPCRFIAPVFADL-AKKHLDVVFFKVDVDELNTVAEEFK 77
Query: 331 INSMPTFVFVKNGKKLDEFSGA 396
+ +MPTF+F+K G+ + GA
Sbjct: 78 VQAMPTFIFMKEGEIKETVVGA 99
>At1g03680.1 68414.m00347 thioredoxin M-type 1, chloroplast (TRX-M1)
nearly identical to SP|O48737 Thioredoxin M-type 1,
chloroplast precursor (TRX-M1) {Arabidopsis thaliana};
similar to ESTs gb|T13714, gb|H76398, gb|N37762,
gb|AA042639, gb|T21104, emb|Z30901
Length = 179
Score = 58.0 bits (134), Expect = 8e-09
Identities = 28/86 (32%), Positives = 40/86 (46%)
Frame = +1
Query: 139 SDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXA 318
+D L D+ V +DF A WCGPCKMI P ++E+A +
Sbjct: 80 NDSTWDSLVLKADEPVFVDFWAPWCGPCKMIDPIVNELAQKYAGQFKFYKLNTDESPATP 139
Query: 319 SEYNINSMPTFVFVKNGKKLDEFSGA 396
+Y + S+PT + NG+K D GA
Sbjct: 140 GQYGVRSIPTIMIFVNGEKKDTIIGA 165
>At4g03520.1 68417.m00480 thioredoxin M-type 2, chloroplast (TRX-M2)
nearly identical to SP|Q9SEU8 Thioredoxin M-type 2,
chloroplast precursor (TRX-M2) {Arabidopsis thaliana}
Length = 186
Score = 54.4 bits (125), Expect = 1e-07
Identities = 24/71 (33%), Positives = 34/71 (47%)
Frame = +1
Query: 184 VVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVFVK 363
VV+DF A WCGPCKMI P ++++A +Y + S+PT +
Sbjct: 101 VVVDFWAPWCGPCKMIDPLVNDLAQHYTGKIKFYKLNTDESPNTPGQYGVRSIPTIMIFV 160
Query: 364 NGKKLDEFSGA 396
G+K D GA
Sbjct: 161 GGEKKDTIIGA 171
>At2g15570.1 68415.m01783 thioredoxin M-type 3, chloroplast (TRX-M3)
identical to SP|Q9SEU7 Thioredoxin M-type 3, chloroplast
precursor (TRX-M3) {Arabidopsis thaliana}
Length = 173
Score = 53.2 bits (122), Expect = 2e-07
Identities = 22/70 (31%), Positives = 35/70 (50%)
Frame = +1
Query: 184 VVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVFVK 363
V+++F +WCGPC+M+ +DEIA + A EY I ++P + K
Sbjct: 87 VLVEFYTSWCGPCRMVHRIIDEIAGDYAGKLNCYLLNADNDLPVAEEYEIKAVPVVLLFK 146
Query: 364 NGKKLDEFSG 393
NG+K + G
Sbjct: 147 NGEKRESIMG 156
>At1g50320.1 68414.m05641 thioredoxin x nearly identical to
thioredoxin x GB:AAF15952 GI:6539616 from [Arabidopsis
thaliana]
Length = 182
Score = 51.2 bits (117), Expect = 9e-07
Identities = 19/65 (29%), Positives = 36/65 (55%)
Frame = +1
Query: 184 VVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVFVK 363
V+++F+ATWCGPCK+I P ++ ++ E +E+ + +P F+ K
Sbjct: 90 VLVEFVATWCGPCKLIYPAMEALSQEYGDKLTIVKIDHDANPKLIAEFKVYGLPHFILFK 149
Query: 364 NGKKL 378
+GK++
Sbjct: 150 DGKEV 154
>At4g26160.1 68417.m03765 thioredoxin family protein low similarity
to thioredoxin [Ictalurus punctatus] GI:9837585;
contains Pfam profile: PF00085 Thioredoxin
Length = 221
Score = 50.0 bits (114), Expect = 2e-06
Identities = 22/50 (44%), Positives = 31/50 (62%)
Frame = +1
Query: 112 PKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAE 261
P M I I ++ L +AGD+LV++DF TWCG C+ + PKL + A E
Sbjct: 93 PNM-IDITSAEQFLNALKDAGDRLVIVDFYGTWCGSCRAMFPKLCKTAKE 141
>At2g40790.1 68415.m05032 thioredoxin family protein contains Pfam
profile: PF00085 thioredoxin
Length = 154
Score = 48.8 bits (111), Expect = 5e-06
Identities = 27/101 (26%), Positives = 52/101 (51%), Gaps = 3/101 (2%)
Frame = +1
Query: 106 YLPKMSIH-IKDSDDLKTRLAEAGD--KLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXX 276
Y K +H + + + ++ EA K++V++F A+WC P K I P E+A+
Sbjct: 36 YFIKGKVHPVSRMEKWEEKITEANSHGKILVVNFKASWCLPSKTILPIYQELAS-TYTSM 94
Query: 277 XXXXXXXXXXXXXASEYNINSMPTFVFVKNGKKLDEFSGAN 399
+ E+N+++ PT VF+K+G+++D+ G +
Sbjct: 95 IFVTIDVEELAEFSHEWNVDATPTVVFLKDGRQMDKLVGGD 135
>At2g35010.1 68415.m04295 thioredoxin family protein similar to
SP|Q42443 Thioredoxin H-type (TRX-H) {Oryza sativa};
contains Pfam profile: PF00085 Thioredoxin
Length = 194
Score = 46.8 bits (106), Expect = 2e-05
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 3/94 (3%)
Frame = +1
Query: 130 IKDSDDLKTRLAEAGDKLV--VIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXX 303
+K ++ +++A D + V F A WCGPC+ I P + E++ +
Sbjct: 89 VKSEEEFINAMSKAQDGSLPSVFYFTAAWCGPCRFISPVIVELSKQYPDVTTYKVDIDEG 148
Query: 304 XXXXA-SEYNINSMPTFVFVKNGKKLDEFSGANV 402
S+ NI ++PT F K G K E GA+V
Sbjct: 149 GISNTISKLNITAVPTLHFFKGGSKKGEVVGADV 182
>At2g33270.1 68415.m04078 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin
Length = 273
Score = 46.4 bits (105), Expect = 3e-05
Identities = 29/91 (31%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Frame = +1
Query: 130 IKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXX 309
+ DL L AGDKLVV+DF + CG CK + PK+ +I AE
Sbjct: 98 VTSPQDLVVSLRNAGDKLVVVDFFSPSCGGCKALHPKICKI-AEKNPEVEFLQVNYEEHR 156
Query: 310 XXASEYNINSMPTFVFVKNGK-KLDEFSGAN 399
NI+ +P F F + ++ FS N
Sbjct: 157 SLCQSLNIHVLPFFRFYRGSSGRVCSFSCTN 187
>At4g29670.2 68417.m04227 thioredoxin family protein contains Pfam
profile PF00085: Thioredoxin
Length = 236
Score = 45.6 bits (103), Expect = 4e-05
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Frame = +1
Query: 112 PKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXX 291
P M + I +++ + L+ AG++LV+++F TWC C+ + PKL + A E
Sbjct: 103 PNM-VDIHSTEEFLSALSGAGERLVIVEFYGTWCASCRALFPKLCKTAVEHPDIVFLKVN 161
Query: 292 XXXXXXXXASEYNINSMPTFVFVKNGK-KLDEFS 390
S N+ +P F F + +L+ FS
Sbjct: 162 FDENKPMCKS-LNVRVLPFFHFYRGADGQLESFS 194
>At4g29670.1 68417.m04226 thioredoxin family protein contains Pfam
profile PF00085: Thioredoxin
Length = 235
Score = 45.6 bits (103), Expect = 4e-05
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Frame = +1
Query: 112 PKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXX 291
P M + I +++ + L+ AG++LV+++F TWC C+ + PKL + A E
Sbjct: 103 PNM-VDIHSTEEFLSALSGAGERLVIVEFYGTWCASCRALFPKLCKTAVEHPDIVFLKVN 161
Query: 292 XXXXXXXXASEYNINSMPTFVFVKNGK-KLDEFS 390
S N+ +P F F + +L+ FS
Sbjct: 162 FDENKPMCKS-LNVRVLPFFHFYRGADGQLESFS 194
>At1g31020.1 68414.m03798 thioredoxin o (TRXO2) similar to
thioredoxin 2 from Saccharomyces cerevisiae GI:173050,
3'-end of protein contains similarity to thioredoxins;
contains Pfam profile: PF00085 Thioredoxin; identical to
cDNA thioredoxin o (TRXO2) GI:15081458
Length = 159
Score = 44.8 bits (101), Expect = 8e-05
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 3/94 (3%)
Frame = +1
Query: 130 IKDSDDLKTRLAEAGDKLV--VIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXX 303
+K + + L++A D + V F A WCGPC++I P + E++ +
Sbjct: 54 LKSEAEFNSALSKARDGSLPSVFYFTAAWCGPCRLISPVILELSNKYPDVTTYKVDIDEG 113
Query: 304 XXXXA-SEYNINSMPTFVFVKNGKKLDEFSGANV 402
A + N++++PT F K G K E G +V
Sbjct: 114 GLSNAIGKLNVSAVPTLQFFKGGVKKAEIVGVDV 147
>At1g08570.1 68414.m00950 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin; similar to ESTs gb|T46281,
gb|R83933, gb|N65879, emb|F14466, gb|N96726,
gb|AA042340, and emb|Z18150
Length = 275
Score = 44.8 bits (101), Expect = 8e-05
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Frame = +1
Query: 130 IKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXX 309
I + +L L AGDKLVV+DF + CG CK + PK+ + AEM
Sbjct: 102 ISSAQELVDSLTNAGDKLVVVDFFSPGCGGCKALHPKICQF-AEMNPDVQFLQVNYEEHK 160
Query: 310 XXASEYNINSMPTFVFVKNGK-KLDEFSGAN 399
++ +P F F + + ++ FS N
Sbjct: 161 SMCYSLGVHVLPFFRFYRGSQGRVCSFSCTN 191
>At5g61440.1 68418.m07709 thioredoxin family protein low similarity
to thioredoxin [Callithrix jacchus] GI:13560979;
contains Pfam profile: PF00085 Thioredoxin
Length = 245
Score = 43.6 bits (98), Expect = 2e-04
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Frame = +1
Query: 124 IHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXX 303
+ I+ ++ L L AGD+LVV+DF + CG CK + PK+ ++ AE
Sbjct: 88 LEIQSANHLVDSLLNAGDRLVVLDFYSPGCGGCKSLHPKICQL-AETNPNVMFLKVNQEE 146
Query: 304 XXXXASEYNINSMPTFVFVKNGK-KLDEFS 390
N++ +P F F + + K+ FS
Sbjct: 147 LRTMCHGLNVHVLPFFKFYRGAEGKVCSFS 176
>At3g56420.1 68416.m06275 thioredoxin family protein similar to
thioredoxin [Nicotiana tabacum] GI:20047; contains Pfam
profile: PF00085 Thioredoxin
Length = 100
Score = 43.6 bits (98), Expect = 2e-04
Identities = 20/65 (30%), Positives = 34/65 (52%)
Frame = +1
Query: 202 ATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVFVKNGKKLD 381
A WC PCK I P ++A+ ++E+N+ + PT VF+K+G+++D
Sbjct: 17 APWCVPCKKIEPVFRDLASRYPSMIFVTVDVEELAEF-SNEWNVEATPTVVFLKDGRQMD 75
Query: 382 EFSGA 396
+ GA
Sbjct: 76 KLVGA 80
>At3g06730.1 68416.m00798 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin
Length = 183
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +1
Query: 172 GDKLV--VIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMP 345
GD+ V ++DF ATWCGPC ++ +L+ +A E A + + +P
Sbjct: 91 GDRKVPLIVDFYATWCGPCILMAQELEMLAVEYESNAIIVKVDTDDEYEFARDMQVRGLP 150
Query: 346 TFVFV 360
T F+
Sbjct: 151 TLFFI 155
>At1g11530.1 68414.m01324 thioredoxin family protein similar to
thioredoxin H-type from Arabidopsis thaliana SP|P29448,
Nicotiana tabacum SP|Q07090; contains Pfam profile:
PF00085 Thioredoxin
Length = 118
Score = 42.3 bits (95), Expect = 4e-04
Identities = 22/74 (29%), Positives = 34/74 (45%)
Frame = +1
Query: 184 VVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVFVK 363
+V F A WC P + +E+A AS+ + +MPTF+F+K
Sbjct: 27 IVAHFTALWCIPSVFMNSFFEELAFNYKDALFLIVDVDEVKEV-ASQLEVKAMPTFLFLK 85
Query: 364 NGKKLDEFSGANVD 405
+G +D+ GAN D
Sbjct: 86 DGNAMDKLVGANPD 99
>At1g77510.1 68414.m09026 protein disulfide isomerase, putative
similar to protein disulfide isomerase precursor
GB:P29828 GI:4704766 [Medicago sativa]; Pfam HMM hit:
PF00085 Thioredoxins
Length = 508
Score = 41.5 bits (93), Expect = 7e-04
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Frame = +1
Query: 184 VVIDFMATWCGPCKMIGPKLDEIAAEM-----XXXXXXXXXXXXXXXXXASEYNINSMPT 348
+V++F A WCG C+ + P+ ++ A+E+ A+EY I PT
Sbjct: 49 IVVEFYAPWCGHCQKLAPEYEKAASELSSHNPPLALAKIDASEEANKEFANEYKIQGFPT 108
Query: 349 FVFVKN-GKKLDEFSG 393
++N GK + +++G
Sbjct: 109 LKILRNGGKSVQDYNG 124
Score = 38.7 bits (86), Expect = 0.005
Identities = 20/60 (33%), Positives = 35/60 (58%), Gaps = 7/60 (11%)
Frame = +1
Query: 97 VSIYLPKMSIHIKDSDDLKTRLAEAGD-------KLVVIDFMATWCGPCKMIGPKLDEIA 255
V+++ I ++++ +K +AE+ D K V+I+F A WCG C+ + P LDE+A
Sbjct: 357 VAVHKKSQPIPAENNEPVKVVVAESLDDIVFKSGKNVLIEFYAPWCGHCQKLAPILDEVA 416
>At2g32920.1 68415.m04036 thioredoxin family protein similar to
SP|Q15084 Protein disulfide isomerase A6 precursor (EC
5.3.4.1) {Homo sapiens}; contains Pfam profile PF00085:
Thioredoxin
Length = 440
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/72 (26%), Positives = 31/72 (43%)
Frame = +1
Query: 181 LVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVFV 360
+V+++F A WCG CK + P +++A + A +Y I PT
Sbjct: 50 VVLVEFFAPWCGHCKALTPTWEKVANILKGVATVAAIDADAHQSAAQDYGIKGFPTIKVF 109
Query: 361 KNGKKLDEFSGA 396
GK ++ GA
Sbjct: 110 VPGKAPIDYQGA 121
Score = 33.5 bits (73), Expect = 0.19
Identities = 13/60 (21%), Positives = 24/60 (40%)
Frame = +1
Query: 175 DKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFV 354
++L +++F A WCG CK + P+ A + S + + PT +
Sbjct: 180 NELWIVEFFAPWCGHCKKLAPEWKRAAKNLQGKVKLGHVNCDVEQSIMSRFKVQGFPTIL 239
>At1g52990.1 68414.m05997 thioredoxin family protein similar to
SP|P48384 Thioredoxin M-type, chloroplast precursor
(TRX-M) {Pisum sativum}; contains Pfam profile PF00085:
Thioredoxin
Length = 313
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/72 (25%), Positives = 37/72 (51%)
Frame = +1
Query: 184 VVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVFVK 363
V++ F A WCGPC+ + P L+++ +E ++I+ +PT + K
Sbjct: 230 VMVMFTARWCGPCRDMIPILNKMDSEYKNEFKFYTVNFDTEIRFTERFDISYLPTTLVFK 289
Query: 364 NGKKLDEFSGAN 399
G+++ + +GA+
Sbjct: 290 GGEQMAKVTGAD 301
>At1g21750.2 68414.m02723 protein disulfide isomerase, putative
similar to SP|P29828 Protein disulfide isomerase
precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform
contains non-consensus GA donor splice site at intron 9
Length = 487
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 6/76 (7%)
Frame = +1
Query: 184 VVIDFMATWCGPCKMIGPKLDEIAAEM-----XXXXXXXXXXXXXXXXXASEYNINSMPT 348
+V++F A WCG CK + P+ ++ A+ + A++Y + PT
Sbjct: 50 IVVEFYAPWCGHCKQLAPEYEKAASALSSNVPPVVLAKIDASEETNREFATQYEVQGFPT 109
Query: 349 F-VFVKNGKKLDEFSG 393
+F GK + E++G
Sbjct: 110 IKIFRNGGKAVQEYNG 125
Score = 38.3 bits (85), Expect = 0.007
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +1
Query: 139 SDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIA 255
SD L + +G K V+++F A WCG C+ + P LDE+A
Sbjct: 381 SDSLDDIVLNSG-KNVLLEFYAPWCGHCQKLAPILDEVA 418
>At1g21750.1 68414.m02722 protein disulfide isomerase, putative
similar to SP|P29828 Protein disulfide isomerase
precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform
contains non-consensus GA donor splice site at intron 9
Length = 501
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 6/76 (7%)
Frame = +1
Query: 184 VVIDFMATWCGPCKMIGPKLDEIAAEM-----XXXXXXXXXXXXXXXXXASEYNINSMPT 348
+V++F A WCG CK + P+ ++ A+ + A++Y + PT
Sbjct: 50 IVVEFYAPWCGHCKQLAPEYEKAASALSSNVPPVVLAKIDASEETNREFATQYEVQGFPT 109
Query: 349 F-VFVKNGKKLDEFSG 393
+F GK + E++G
Sbjct: 110 IKIFRNGGKAVQEYNG 125
Score = 38.3 bits (85), Expect = 0.007
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +1
Query: 139 SDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIA 255
SD L + +G K V+++F A WCG C+ + P LDE+A
Sbjct: 381 SDSLDDIVLNSG-KNVLLEFYAPWCGHCQKLAPILDEVA 418
>At1g04980.1 68414.m00497 thioredoxin family protein similar to
SP|Q63081 Protein disulfide isomerase A6 precursor (EC
5.3.4.1) {Rattus norvegicus}; contains Pfam profile
PF00085: Thioredoxin
Length = 443
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/72 (22%), Positives = 32/72 (44%)
Frame = +1
Query: 181 LVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVFV 360
+V+++F A WCG C+ + P +++A+ + + +Y + PT
Sbjct: 48 VVLVEFFAPWCGHCQSLTPTWEKVASTLKGIATVAAIDADAHKSVSQDYGVRGFPTIKVF 107
Query: 361 KNGKKLDEFSGA 396
GK ++ GA
Sbjct: 108 VPGKPPIDYQGA 119
Score = 35.5 bits (78), Expect = 0.047
Identities = 21/89 (23%), Positives = 35/89 (39%), Gaps = 2/89 (2%)
Frame = +1
Query: 112 PKMSIHIKDS--DDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXX 285
P S+ + S D+L T E L +++F A WCG CK + P+ + A +
Sbjct: 162 PSASVELNSSNFDELVTESKE----LWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLG 217
Query: 286 XXXXXXXXXXASEYNINSMPTFVFVKNGK 372
S + + PT + + K
Sbjct: 218 HVNCDAEQSIKSRFKVQGFPTILVFGSDK 246
>At1g35620.1 68414.m04425 thioredoxin family protein similar to
SP|Q43116 Protein disulfide isomerase precursor (PDI)
(EC 5.3.4.1) {Ricinus communis}; contains Pfam profile
PF00085: Thioredoxin
Length = 440
Score = 38.7 bits (86), Expect = 0.005
Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
Frame = +1
Query: 184 VVIDFMATWCGPCKMIGPKLD---EIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFV 354
+ +DF A WCG CK + P+LD I A++ A + I++ PT +
Sbjct: 52 IFVDFYAPWCGHCKRLNPELDAAAPILAKLKQPIVIAKLNADKYSRLARKIEIDAFPTLM 111
Query: 355 FVKNGKKLDEFSGANVD 405
+G ++ + D
Sbjct: 112 LYNHGVPMEYYGPRKAD 128
>At5g04260.1 68418.m00417 thioredoxin family protein low similarity
to SP|P29429 Thioredoxin. [Aspergillus nidulans]
{Emericella nidulans}; contains Pfam profile: PF00085
Thioredoxin
Length = 192
Score = 37.9 bits (84), Expect = 0.009
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = +1
Query: 184 VVIDFMATWCGPCKMIGPKLDEIAAEM-XXXXXXXXXXXXXXXXXASEYNINSMPTFVFV 360
VVI +MA WC C + PKL+++AAE S + MPT
Sbjct: 101 VVIVWMAAWCRKCIYLKPKLEKLAAEFYPRLRFYHVDVNAVPYRLVSRAGVTKMPTIQLW 160
Query: 361 KNGKKLDEFSGAN 399
++G+K E G +
Sbjct: 161 RDGQKQAEVIGGH 173
>At5g60640.2 68418.m07611 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 536
Score = 37.5 bits (83), Expect = 0.012
Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +1
Query: 175 DKLVVIDFMATWCGPCKMIGPKLDEIAAEM-XXXXXXXXXXXXXXXXXASEYNINSMPTF 351
++ V+++F A WCG C+ + P+ A E+ A EY + PT
Sbjct: 120 NQYVLVEFYAPWCGHCQSLAPEYAAAATELKEDGVVLAKIDATEENELAQEYRVQGFPTL 179
Query: 352 VFVKNGK 372
+F +G+
Sbjct: 180 LFFVDGE 186
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/69 (21%), Positives = 26/69 (37%)
Frame = +1
Query: 178 KLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVF 357
K V+++ A WCG C+ + P +++A + + PT +F
Sbjct: 460 KDVLLEVYAPWCGHCQALEPMYNKLAKHLRSIDSLVITKMDGTTNEHPKAKAEGFPTILF 519
Query: 358 VKNGKKLDE 384
G K E
Sbjct: 520 FPAGNKTSE 528
>At5g60640.1 68418.m07610 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 597
Score = 37.5 bits (83), Expect = 0.012
Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +1
Query: 175 DKLVVIDFMATWCGPCKMIGPKLDEIAAEM-XXXXXXXXXXXXXXXXXASEYNINSMPTF 351
++ V+++F A WCG C+ + P+ A E+ A EY + PT
Sbjct: 120 NQYVLVEFYAPWCGHCQSLAPEYAAAATELKEDGVVLAKIDATEENELAQEYRVQGFPTL 179
Query: 352 VFVKNGK 372
+F +G+
Sbjct: 180 LFFVDGE 186
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/69 (21%), Positives = 26/69 (37%)
Frame = +1
Query: 178 KLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVF 357
K V+++ A WCG C+ + P +++A + + PT +F
Sbjct: 460 KDVLLEVYAPWCGHCQALEPMYNKLAKHLRSIDSLVITKMDGTTNEHPKAKAEGFPTILF 519
Query: 358 VKNGKKLDE 384
G K E
Sbjct: 520 FPAGNKTSE 528
>At5g06690.1 68418.m00756 thioredoxin family protein low similiarity
to SP|P34723 Thioredoxin {Penicillium chrysogenum};
contains Pfam profile: PF00085 Thioredoxin
Length = 210
Score = 37.5 bits (83), Expect = 0.012
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +1
Query: 184 VVIDFMATWCGPCKMIGPKLDEIAAEM-XXXXXXXXXXXXXXXXXASEYNINSMPTFVFV 360
++I++MA+WC C + PKL+++AAE NI+ MPT
Sbjct: 121 IIIEWMASWCRKCIYLKPKLEKLAAEYNNRAKFYYVDVNKVPQTLVKRGNISKMPTIQLW 180
Query: 361 KNGKKLDEFSGAN 399
K + +E G +
Sbjct: 181 KEDEMKEEVIGGH 193
>At4g04950.1 68417.m00719 thioredoxin family protein similar to
PKCq-interacting protein PICOT from [Mus musculus]
GI:6840949, [Rattus norvegicus] GI:6840951; contains
Pfam profile PF00085: Thioredoxin
Length = 488
Score = 37.5 bits (83), Expect = 0.012
Identities = 19/72 (26%), Positives = 32/72 (44%)
Frame = +1
Query: 184 VVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVFVK 363
VV+ F A+WC K + +A + + Y++ ++P FVF K
Sbjct: 24 VVLHFWASWCDASKQMDQVFSHLATDFPRAHFFRVEAEEHPEI-SEAYSVAAVPYFVFFK 82
Query: 364 NGKKLDEFSGAN 399
+GK +D GA+
Sbjct: 83 DGKTVDTLEGAD 94
>At1g76080.1 68414.m08835 thioredoxin family protein low similarity
to thioredoxin (TRX) [Fasciola hepatica] GI:6687568;
contains Pfam profile PF00085: Thioredoxin
Length = 302
Score = 37.1 bits (82), Expect = 0.016
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Frame = +1
Query: 172 GDKLVVIDFMATWCGPCKMIGP---KLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSM 342
G KL+V+D CGPC + P KL +E + N+ +
Sbjct: 206 GGKLIVLDVGLKHCGPCVKVYPTVLKLSRSMSETVVFARMNGDENDSCMEFLKDMNVIEV 265
Query: 343 PTFVFVKNGKKLDEFSGA 396
PTF+F+++G+ + G+
Sbjct: 266 PTFLFIRDGEIRGRYVGS 283
>At3g54960.1 68416.m06094 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 579
Score = 36.7 bits (81), Expect = 0.021
Identities = 16/73 (21%), Positives = 28/73 (38%)
Frame = +1
Query: 175 DKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFV 354
+ +++F A WCG C+ + P+ A E+ A +Y I PT
Sbjct: 116 NSFAMVEFYAPWCGACQALTPEYAAAATELKGLAALAKIDATEEGDLAQKYEIQGFPTVF 175
Query: 355 FVKNGKKLDEFSG 393
+G+ + G
Sbjct: 176 LFVDGEMRKTYEG 188
>At3g53220.1 68416.m05864 thioredoxin family protein low similarity
to SP|P29451 Thioredoxin [Rhesus macaque] {Macaca
mulatta}; contains Pfam profile: PF00085 Thioredoxin
Length = 126
Score = 36.7 bits (81), Expect = 0.021
Identities = 24/85 (28%), Positives = 39/85 (45%)
Frame = +1
Query: 142 DDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXAS 321
DD+K+ + A VI++ A+WCG C I P +++ +
Sbjct: 37 DDIKSSKSPA-----VINYGASWCGVCSQILPAFRKLSNSFSKLKFVYADIDECPE---T 88
Query: 322 EYNINSMPTFVFVKNGKKLDEFSGA 396
+I PTF F ++G+K+DE GA
Sbjct: 89 TRHIRYTPTFQFYRDGEKVDEMFGA 113
>At2g47470.2 68415.m05924 thioredoxin family protein similar to
protein disulfide isomerase [Dictyostelium discoideum]
GI:2627440; contains Pfam profile: PF00085 Thioredoxin
Length = 266
Score = 36.3 bits (80), Expect = 0.027
Identities = 19/64 (29%), Positives = 32/64 (50%)
Frame = +1
Query: 67 FAF*TVILFLVSIYLPKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLD 246
F F + L LVS + + DS + + DK +++F A WCG CK + P+ +
Sbjct: 8 FGFALLALLLVSAVADDVVVLTDDSFEKEV----GKDKGALVEFYAPWCGHCKKLAPEYE 63
Query: 247 EIAA 258
++ A
Sbjct: 64 KLGA 67
Score = 35.5 bits (78), Expect = 0.047
Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Frame = +1
Query: 175 DKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXA--SEYNINSMPT 348
+K V+++F A WCG CK + P +++A A +Y ++ PT
Sbjct: 159 NKDVLVEFYAPWCGHCKSLAPTYEKVATVFKQEEGVVIANLDADAHKALGEKYGVSGFPT 218
Query: 349 F-VFVKNGKKLDEFSG 393
F K+ K ++ G
Sbjct: 219 LKFFPKDNKAGHDYDG 234
>At2g47470.1 68415.m05925 thioredoxin family protein similar to
protein disulfide isomerase [Dictyostelium discoideum]
GI:2627440; contains Pfam profile: PF00085 Thioredoxin
Length = 361
Score = 36.3 bits (80), Expect = 0.027
Identities = 19/64 (29%), Positives = 32/64 (50%)
Frame = +1
Query: 67 FAF*TVILFLVSIYLPKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLD 246
F F + L LVS + + DS + + DK +++F A WCG CK + P+ +
Sbjct: 8 FGFALLALLLVSAVADDVVVLTDDSFEKEV----GKDKGALVEFYAPWCGHCKKLAPEYE 63
Query: 247 EIAA 258
++ A
Sbjct: 64 KLGA 67
Score = 35.5 bits (78), Expect = 0.047
Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Frame = +1
Query: 175 DKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXA--SEYNINSMPT 348
+K V+++F A WCG CK + P +++A A +Y ++ PT
Sbjct: 159 NKDVLVEFYAPWCGHCKSLAPTYEKVATVFKQEEGVVIANLDADAHKALGEKYGVSGFPT 218
Query: 349 F-VFVKNGKKLDEFSG 393
F K+ K ++ G
Sbjct: 219 LKFFPKDNKAGHDYDG 234
>At1g07960.3 68414.m00867 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 36.3 bits (80), Expect = 0.027
Identities = 22/106 (20%), Positives = 43/106 (40%), Gaps = 2/106 (1%)
Frame = +1
Query: 82 VILFLVSIYLPKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAE 261
++L + I L K + + ++ E D + F WC CK +G +++
Sbjct: 13 ILLLFIPIELVKAEVITLTPETFSDKIKEK-DTAWFVKFCVPWCKHCKKLGNLWEDLGKA 71
Query: 262 MXXXXXXXXXXXXXXXXXA--SEYNINSMPTFVFVKNGKKLDEFSG 393
M A ++ I+S PTF+ NG+++ ++ G
Sbjct: 72 MEGDDEIEVGEVDCGTSRAVCTKVEIHSYPTFMLFYNGEEVSKYKG 117
>At1g07960.2 68414.m00866 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 36.3 bits (80), Expect = 0.027
Identities = 22/106 (20%), Positives = 43/106 (40%), Gaps = 2/106 (1%)
Frame = +1
Query: 82 VILFLVSIYLPKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAE 261
++L + I L K + + ++ E D + F WC CK +G +++
Sbjct: 13 ILLLFIPIELVKAEVITLTPETFSDKIKEK-DTAWFVKFCVPWCKHCKKLGNLWEDLGKA 71
Query: 262 MXXXXXXXXXXXXXXXXXA--SEYNINSMPTFVFVKNGKKLDEFSG 393
M A ++ I+S PTF+ NG+++ ++ G
Sbjct: 72 MEGDDEIEVGEVDCGTSRAVCTKVEIHSYPTFMLFYNGEEVSKYKG 117
>At1g07960.1 68414.m00865 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 36.3 bits (80), Expect = 0.027
Identities = 22/106 (20%), Positives = 43/106 (40%), Gaps = 2/106 (1%)
Frame = +1
Query: 82 VILFLVSIYLPKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAE 261
++L + I L K + + ++ E D + F WC CK +G +++
Sbjct: 13 ILLLFIPIELVKAEVITLTPETFSDKIKEK-DTAWFVKFCVPWCKHCKKLGNLWEDLGKA 71
Query: 262 MXXXXXXXXXXXXXXXXXA--SEYNINSMPTFVFVKNGKKLDEFSG 393
M A ++ I+S PTF+ NG+++ ++ G
Sbjct: 72 MEGDDEIEVGEVDCGTSRAVCTKVEIHSYPTFMLFYNGEEVSKYKG 117
>At4g32580.1 68417.m04638 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin
Length = 160
Score = 35.9 bits (79), Expect = 0.036
Identities = 26/96 (27%), Positives = 41/96 (42%), Gaps = 2/96 (2%)
Frame = +1
Query: 118 MSIHIKD--SDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXX 291
MS +KD S + L +G LV + F A+WC K + +A +
Sbjct: 1 MSGTVKDIVSKEELDNLRHSGAPLV-LHFWASWCDASKQMDQVFSHLATDFPRAHFFRVE 59
Query: 292 XXXXXXXXASEYNINSMPTFVFVKNGKKLDEFSGAN 399
+ Y++ +P FVF K+GK +D GA+
Sbjct: 60 AEEHPEI-SEAYSVALVPYFVFFKDGKTVDTLEGAD 94
>At1g60420.1 68414.m06802 DC1 domain-containing protein contains
Pfam domain PF03107: DC1 domain
Length = 578
Score = 34.3 bits (75), Expect = 0.11
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +1
Query: 127 HIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEI 252
++ D K +++ K +++ F A WC PC+ PKL E+
Sbjct: 347 YVLGKDGAKVLVSDLVGKTILMYFSAHWCPPCRAFTPKLVEV 388
Score = 32.7 bits (71), Expect = 0.33
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 178 KLVVIDFMATWCGPCKMIGPKLDEIAAEM 264
K + + F A WCGPC+ P+L E+ E+
Sbjct: 44 KKIGLYFSAAWCGPCQRFTPQLVEVYNEL 72
>At1g07700.3 68414.m00829 thioredoxin family protein low similarity
to thioredoxin [Gallus gallus] GI:212766; contains Pfam
profile: PF00085 Thioredoxin
Length = 217
Score = 33.5 bits (73), Expect = 0.19
Identities = 26/95 (27%), Positives = 39/95 (41%), Gaps = 9/95 (9%)
Frame = +1
Query: 133 KDSDDLKTRLAEAGD--KLVVIDFMATWCGPCKMIGPKLDEIA-------AEMXXXXXXX 285
K D+L + L ++ + LVV+DF T CG CK I ++ A +
Sbjct: 104 KTDDELLSVLEKSKETNSLVVVDFYRTACGSCKYIEQGFSKLCKQSGDQEAPVIFLKHNV 163
Query: 286 XXXXXXXXXXASEYNINSMPTFVFVKNGKKLDEFS 390
A I ++P F F KNG L+ F+
Sbjct: 164 VDEYDEQSEVAERLRIKAVPLFHFYKNGVLLESFA 198
>At1g07700.1 68414.m00828 thioredoxin family protein low similarity
to thioredoxin [Gallus gallus] GI:212766; contains Pfam
profile: PF00085 Thioredoxin
Length = 204
Score = 33.5 bits (73), Expect = 0.19
Identities = 26/95 (27%), Positives = 39/95 (41%), Gaps = 9/95 (9%)
Frame = +1
Query: 133 KDSDDLKTRLAEAGD--KLVVIDFMATWCGPCKMIGPKLDEIA-------AEMXXXXXXX 285
K D+L + L ++ + LVV+DF T CG CK I ++ A +
Sbjct: 91 KTDDELLSVLEKSKETNSLVVVDFYRTACGSCKYIEQGFSKLCKQSGDQEAPVIFLKHNV 150
Query: 286 XXXXXXXXXXASEYNINSMPTFVFVKNGKKLDEFS 390
A I ++P F F KNG L+ F+
Sbjct: 151 VDEYDEQSEVAERLRIKAVPLFHFYKNGVLLESFA 185
>At3g03860.1 68416.m00398 expressed protein
Length = 300
Score = 32.3 bits (70), Expect = 0.44
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
Frame = +1
Query: 100 SIYLPKMSIHIKDSDDLKTRLA-EAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXX 276
S+Y P I + D D L +A + G+ + + F A+WC + + PK D +++
Sbjct: 50 SLY-PTPPIEV-DGDSLDRLMASQHGNAYMSVLFYASWCPFSRAVRPKFDMLSSMFPQIQ 107
Query: 277 XXXXXXXXXXXXXASEYNINSMPTFVFV 360
S Y I+S+P+ + V
Sbjct: 108 HLAVEHSQALPSVFSRYGIHSLPSILMV 135
>At2g41680.1 68415.m05149 thioredoxin reductase, putative /
NADPH-dependent thioredoxin reductase, putative The last
2 exons encode thioredoxin. There is an EST match to
exons 5-7, and the distance between exon 7 and exon 8 is
only 90bp. It is unlikely this is two separate genes,
but more likely a hybrid protein.
Length = 529
Score = 31.9 bits (69), Expect = 0.58
Identities = 17/82 (20%), Positives = 32/82 (39%)
Frame = +1
Query: 157 RLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNIN 336
+L +++++ + + CGPC+ + P L+++ E A I
Sbjct: 436 KLYHESPRVILVLYTSPTCGPCRTLKPILNKVVDEYNHDVHFVEIDIEEDQEIAEAAGIM 495
Query: 337 SMPTFVFVKNGKKLDEFSGANV 402
P F KN + L SG +
Sbjct: 496 GTPCVQFFKNKEMLRTISGVKM 517
>At1g43100.1 68414.m04965 glycoside hydrolase family 28 protein /
polygalacturonase (pectinase) family protein similar to
SP|P35339 Exopolygalacturonase precursor (EC 3.2.1.67)
(Pectinase) (Galacturan 1,4-alpha-galacturonidase) {Zea
mays}; contains Pfam profile PF00295: Glycosyl
hydrolases family 28 (polygalacturonases)
Length = 444
Score = 31.1 bits (67), Expect = 1.0
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = +3
Query: 453 CTQPPMETKWNLKKKHVYVFNK*IKNVFNVCNEFEDINFLCLQPLECK 596
C PP E + K HV + + +KN++ N +N C + CK
Sbjct: 317 CPHPPCEHE-KKGKSHVQIQDIKLKNIYGTSNNIVAVNLQCSKSFPCK 363
>At1g43090.1 68414.m04964 glycoside hydrolase family 28 protein /
polygalacturonase (pectinase) family protein similar to
SP|P35339 Exopolygalacturonase precursor (EC 3.2.1.67)
(Pectinase) (Galacturan 1,4-alpha-galacturonidase) {Zea
mays}; contains Pfam profile PF00295: Glycosyl
hydrolases family 28 (polygalacturonases)
Length = 444
Score = 31.1 bits (67), Expect = 1.0
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = +3
Query: 453 CTQPPMETKWNLKKKHVYVFNK*IKNVFNVCNEFEDINFLCLQPLECK 596
C PP E + K HV + + +KN++ N +N C + CK
Sbjct: 317 CPHPPCEHE-KKGKSHVQIQDIKLKNIYGTSNNIVAVNLQCSKSFPCK 363
>At5g61340.1 68418.m07697 expressed protein
Length = 326
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = -2
Query: 568 KLISSN-SLQTLKTFFIYLLKTYTCFFF 488
KL+S+N S + F++ LLKTY C FF
Sbjct: 108 KLLSNNHSADSSSVFYLRLLKTYVCNFF 135
>At5g60620.1 68418.m07608 phospholipid/glycerol acyltransferase
family protein contains Pfam PF01553: Acyltransferase
Length = 376
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/52 (28%), Positives = 31/52 (59%)
Frame = +1
Query: 85 ILFLVSIYLPKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPK 240
I+FL S+++P ++ +K D L+ ++ +++ F+A+W G K GP+
Sbjct: 109 IIFL-SLFIPVNAL-LKGQDRLRKKIERVLVEMICSFFVASWTGVVKYHGPR 158
>At1g43080.1 68414.m04963 glycoside hydrolase family 28 protein /
polygalacturonase (pectinase) family protein similar to
SP|P35339 Exopolygalacturonase precursor (EC 3.2.1.67)
(Pectinase) (Galacturan 1,4-alpha-galacturonidase) {Zea
mays}; contains Pfam profile PF00295: Glycosyl
hydrolases family 28 (polygalacturonases)
Length = 404
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = +3
Query: 453 CTQPPMETKWNLKKKHVYVFNK*IKNVFNVCNEFEDINFLCLQPLECK 596
C PP E + + HV + + +KN++ N +N C + CK
Sbjct: 317 CPHPPCEHE-KKGESHVQIQDIKLKNIYGTSNNIVAVNLQCSKSFPCK 363
>At1g07700.2 68414.m00827 thioredoxin family protein low similarity
to thioredoxin [Gallus gallus] GI:212766; contains Pfam
profile: PF00085 Thioredoxin
Length = 171
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +1
Query: 133 KDSDDLKTRLAEAGD--KLVVIDFMATWCGPCKMI 231
K D+L + L ++ + LVV+DF T CG CK I
Sbjct: 91 KTDDELLSVLEKSKETNSLVVVDFYRTACGSCKYI 125
>At2g26620.1 68415.m03194 glycoside hydrolase family 28 protein /
polygalacturonase (pectinase) family protein similar to
SP|P35339 Exopolygalacturonase precursor (EC 3.2.1.67)
(Pectinase) (Galacturan 1,4-alpha-galacturonidase) {Zea
mays}; contains Pfam profile PF00295: Glycosyl
hydrolases family 28 (polygalacturonases)
Length = 402
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = +3
Query: 453 CTQPPMETKWNLKKKHVYVFNK*IKNVFNVCNEFEDINFLCLQPLECK 596
C PP E + +K HV + + +KN++ +N C + CK
Sbjct: 317 CPHPPCEHE---RKSHVQIQDLKLKNIYGTSKNKVAVNLQCSKSFPCK 361
>At4g30290.1 68417.m04305 xyloglucan:xyloglucosyl transferase,
putative / xyloglucan endotransglycosylase, putative /
endo-xyloglucan transferase, putative similar to
xyloglucan endotransglycosylase TCH4 GI:886116 from
[Arabidopsis thaliana]
Length = 277
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -2
Query: 613 QQNQYFLHSRGCKHKKLISSNSLQTLKTFFI 521
Q NQ FL+ + KL+ NS T+ TF++
Sbjct: 60 QSNQEFLYGKAEVQMKLVPGNSAGTVTTFYL 90
>At4g30280.1 68417.m04304 xyloglucan:xyloglucosyl transferase,
putative / xyloglucan endotransglycosylase, putative /
endo-xyloglucan transferase, putative similar to
xyloglucan endotransglycosylase TCH4 GI:886116 from
[Arabidopsis thaliana]
Length = 282
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -2
Query: 613 QQNQYFLHSRGCKHKKLISSNSLQTLKTFFI 521
Q NQ FL+ + KL+ NS T+ TF++
Sbjct: 65 QSNQEFLYGKAEVQMKLVPGNSAGTVTTFYL 95
>At1g65310.1 68414.m07406 xyloglucan:xyloglucosyl transferase,
putative / xyloglucan endotransglycosylase, putative /
endo-xyloglucan transferase, putative similar to
xyloglucan endotransglycosylase TCH4 GI:886116 from
[Arabidopsis thaliana]
Length = 282
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -2
Query: 613 QQNQYFLHSRGCKHKKLISSNSLQTLKTFFI 521
Q NQ FL+ + KL+ NS T+ TF++
Sbjct: 65 QSNQEFLYGKAEVQMKLVPGNSAGTVTTFYL 95
>At4g31240.2 68417.m04435 expressed protein
Length = 392
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 178 KLVVIDFMATWCGPCKMIGPKL 243
K + + F A WC PCK P+L
Sbjct: 44 KTICLFFSAIWCRPCKDFTPEL 65
>At4g31240.1 68417.m04434 expressed protein
Length = 392
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 178 KLVVIDFMATWCGPCKMIGPKL 243
K + + F A WC PCK P+L
Sbjct: 44 KTICLFFSAIWCRPCKDFTPEL 65
>At4g13760.1 68417.m02135 glycoside hydrolase family 28 protein /
polygalacturonase (pectinase) family protein similar to
SP|P35339 Exopolygalacturonase precursor (EC 3.2.1.67)
(Pectinase) (Galacturan 1,4-alpha-galacturonidase) {Zea
mays}; contains PF00295: Glycosyl hydrolases family 28
(polygalacturonases)
Length = 375
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/48 (27%), Positives = 21/48 (43%)
Frame = +3
Query: 453 CTQPPMETKWNLKKKHVYVFNK*IKNVFNVCNEFEDINFLCLQPLECK 596
C PP E + + HV + N +KN++ +N C + CK
Sbjct: 288 CPHPPCEHEQK-GESHVQIQNLKLKNIYGTSKNKVAVNLQCSKRFPCK 334
>At2g27410.1 68415.m03312 hypothetical protein contains Pfam profile
PF03754: Domain of unknown function (DUF313)
Length = 309
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 477 KWNLKKKHVYVFNK*IKNVFNVC 545
KW +K +YVF K KNV + C
Sbjct: 209 KWKMKGNWIYVFVKGWKNVLDAC 231
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,003,467
Number of Sequences: 28952
Number of extensions: 284085
Number of successful extensions: 727
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 676
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 699
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 2077687200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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