Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_P23
(404 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62888 Cluster: 60S ribosomal protein L30; n=127; Eukar... 180 1e-44
UniRef50_P58374 Cluster: 60S ribosomal protein L30; n=20; Eukary... 170 8e-42
UniRef50_Q8VZ19 Cluster: 60S ribosomal protein L30-2; n=34; Euka... 152 3e-36
UniRef50_P49153 Cluster: 60S ribosomal protein L30; n=15; Eukary... 141 6e-33
UniRef50_P14120 Cluster: 60S ribosomal protein L30; n=6; Eukaryo... 121 5e-27
UniRef50_Q9XG43 Cluster: 60S ribosomal protein L30; n=1; Guillar... 110 9e-24
UniRef50_A2DH05 Cluster: 60S ribosomal protein L30, putative; n=... 103 2e-21
UniRef50_UPI0000E81F40 Cluster: PREDICTED: similar to ribosomal ... 95 4e-19
UniRef50_A0BYD7 Cluster: Chromosome undetermined scaffold_137, w... 94 8e-19
UniRef50_Q7QQS4 Cluster: GLP_24_9208_8879; n=1; Giardia lamblia ... 86 2e-16
UniRef50_Q8U0M6 Cluster: 50S ribosomal protein L30e; n=3; Pyroco... 75 7e-13
UniRef50_O27127 Cluster: 50S ribosomal protein L30e; n=4; Euryar... 73 2e-12
UniRef50_Q8TXJ0 Cluster: 50S ribosomal protein L30e; n=6; Archae... 72 5e-12
UniRef50_Q9YAU3 Cluster: 50S ribosomal protein L30e; n=1; Aeropy... 72 5e-12
UniRef50_A4WNA1 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 69 5e-11
UniRef50_Q8ZYQ6 Cluster: 50S ribosomal protein L30e; n=4; Thermo... 68 6e-11
UniRef50_A7I9N4 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 66 3e-10
UniRef50_O28389 Cluster: 50S ribosomal protein L30e; n=1; Archae... 66 3e-10
UniRef50_P54061 Cluster: 50S ribosomal protein L30e; n=8; Archae... 65 4e-10
UniRef50_Q8SRU1 Cluster: 60S RIBOSOMAL PROTEIN L30; n=1; Encepha... 62 4e-09
UniRef50_Q980R3 Cluster: 50S ribosomal protein L30e; n=4; Sulfol... 62 4e-09
UniRef50_Q2FPJ8 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 58 7e-08
UniRef50_Q0W8G7 Cluster: 50S ribosomal protein L30E; n=1; uncult... 55 5e-07
UniRef50_Q74MP1 Cluster: NEQ179; n=1; Nanoarchaeum equitans|Rep:... 54 8e-07
UniRef50_Q8PUR3 Cluster: 50S ribosomal protein L30e; n=4; Methan... 53 2e-06
UniRef50_A2SQE2 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 50 1e-05
UniRef50_Q3LWG3 Cluster: Ribosomal protein L30; n=1; Bigelowiell... 48 5e-05
UniRef50_A4GI98 Cluster: Ribosomal protein L30e; n=1; uncultured... 45 5e-04
UniRef50_A0B560 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 44 0.001
UniRef50_Q00T87 Cluster: Chromosome 17 contig 1, DNA sequence; n... 42 0.004
UniRef50_A5ISF2 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 40 0.019
UniRef50_Q41A26 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 40 0.025
UniRef50_Q7XYC7 Cluster: Ribosomal protein L30; n=1; Triticum ae... 40 0.025
UniRef50_P55858 Cluster: 50S ribosomal protein L7Ae; n=44; Archa... 40 0.025
UniRef50_Q2RJM6 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 39 0.033
UniRef50_Q1FIZ9 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 39 0.043
UniRef50_Q9Z9M0 Cluster: Putative ribosomal protein L7Ae-like; n... 38 0.057
UniRef50_Q97S58 Cluster: Ribosomal protein L7A family; n=43; Lac... 36 0.23
UniRef50_Q835U9 Cluster: Ribosomal protein L7A family; n=2; Lact... 36 0.31
UniRef50_A7Q291 Cluster: Chromosome chr13 scaffold_45, whole gen... 36 0.31
UniRef50_A5KLN0 Cluster: Putative uncharacterized protein; n=2; ... 35 0.54
UniRef50_A3DE45 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 35 0.54
UniRef50_A5ZAJ2 Cluster: Putative uncharacterized protein; n=1; ... 35 0.71
UniRef50_Q18BH0 Cluster: Putative ribosomal protein precursor; n... 34 0.94
UniRef50_A6W8L6 Cluster: Type III secretion exporter; n=1; Kineo... 34 0.94
UniRef50_P62495 Cluster: Eukaryotic peptide chain release factor... 34 0.94
UniRef50_Q190U6 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 34 1.2
UniRef50_A6TRK8 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 33 1.6
UniRef50_A2BJ73 Cluster: Ferrous iron transport protein; n=1; Hy... 33 1.6
UniRef50_Q6KZI7 Cluster: 50S ribosomal protein L7Ae; n=4; Thermo... 33 1.6
UniRef50_Q7R1P2 Cluster: GLP_28_32750_32382; n=1; Giardia lambli... 33 2.9
UniRef50_P55768 Cluster: Probable ribosomal protein in infB 5're... 33 2.9
UniRef50_P80341 Cluster: 50S ribosomal protein L35; n=5; Deinoco... 32 3.8
UniRef50_Q3AB97 Cluster: Ribosomal protein L7ae family protein; ... 32 5.0
UniRef50_P34667 Cluster: Uncharacterized protein ZK686.1; n=1; C... 32 5.0
UniRef50_Q8ZTA5 Cluster: 50S ribosomal protein L7Ae; n=7; Archae... 32 5.0
UniRef50_UPI0000DB701B Cluster: PREDICTED: similar to CG11847-PA... 31 6.6
UniRef50_Q81Y70 Cluster: Acetyl-CoA acetyltransferase; n=11; Bac... 31 6.6
UniRef50_Q03FS4 Cluster: Ribosomal protein HS6-type; n=1; Pedioc... 31 6.6
UniRef50_Q5KA50 Cluster: Expressed protein; n=1; Filobasidiella ... 31 6.6
UniRef50_UPI0000D9F481 Cluster: PREDICTED: similar to eukaryotic... 31 8.7
UniRef50_Q8ZY90 Cluster: ATP-dependent, DNA binding helicase; n=... 31 8.7
UniRef50_A0RUB4 Cluster: Ribosomal protein H6-type; n=1; Cenarch... 31 8.7
>UniRef50_P62888 Cluster: 60S ribosomal protein L30; n=127;
Eukaryota|Rep: 60S ribosomal protein L30 - Homo sapiens
(Human)
Length = 115
Score = 180 bits (438), Expect = 1e-44
Identities = 85/99 (85%), Positives = 90/99 (90%)
Frame = -3
Query: 339 MVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEI 160
MVAAKK KK++ESINSRL LVMKSGKY LGYKQTLK +RQGKAKLVI+A N P LRKSEI
Sbjct: 1 MVAAKKTKKSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEI 60
Query: 159 EYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITXP 43
EYYA+LAKTGVHHYSGNNIELGTACGKYYRVCTLAI P
Sbjct: 61 EYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDP 99
>UniRef50_P58374 Cluster: 60S ribosomal protein L30; n=20;
Eukaryota|Rep: 60S ribosomal protein L30 - Branchiostoma
belcheri (Amphioxus)
Length = 114
Score = 170 bits (414), Expect = 8e-42
Identities = 79/95 (83%), Positives = 87/95 (91%)
Frame = -3
Query: 327 KKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYA 148
K+++KT+ESINSRL LVMKSGKY LG K+TLK LRQGKAKL+IIA N P LRKSEIEYYA
Sbjct: 2 KQKRKTMESINSRLQLVMKSGKYVLGLKETLKVLRQGKAKLIIIANNTPALRKSEIEYYA 61
Query: 147 LLAKTGVHHYSGNNIELGTACGKYYRVCTLAITXP 43
+LAKTGVHHYSGNNIELGTACGKY+RVCTLAIT P
Sbjct: 62 MLAKTGVHHYSGNNIELGTACGKYFRVCTLAITDP 96
>UniRef50_Q8VZ19 Cluster: 60S ribosomal protein L30-2; n=34;
Eukaryota|Rep: 60S ribosomal protein L30-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 112
Score = 152 bits (368), Expect = 3e-36
Identities = 69/99 (69%), Positives = 81/99 (81%)
Frame = -3
Query: 339 MVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEI 160
MV KK KK+ E INSRLALVMKSGKY LGYK LK+LR K KL++I+ N PPLR+SEI
Sbjct: 1 MVTEKKTKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRGSKGKLILISTNCPPLRRSEI 60
Query: 159 EYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITXP 43
EYYA+LAK GVHHY+GNN++LGTACGKY+RV L+I P
Sbjct: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIVDP 99
>UniRef50_P49153 Cluster: 60S ribosomal protein L30; n=15;
Eukaryota|Rep: 60S ribosomal protein L30 - Trypanosoma
brucei brucei
Length = 105
Score = 141 bits (341), Expect = 6e-33
Identities = 59/94 (62%), Positives = 81/94 (86%)
Frame = -3
Query: 330 AKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYY 151
AKK K +++IN+++ LVMKSGKY LG +Q+LKTLRQG++KLV+I+ N PP+RK+EIEYY
Sbjct: 2 AKKVKSKVDTINTKIQLVMKSGKYVLGTQQSLKTLRQGRSKLVVISANCPPIRKAEIEYY 61
Query: 150 ALLAKTGVHHYSGNNIELGTACGKYYRVCTLAIT 49
L+KT +HHYSGNN++LGTACG+++R C L+IT
Sbjct: 62 CTLSKTPIHHYSGNNLDLGTACGRHFRACVLSIT 95
>UniRef50_P14120 Cluster: 60S ribosomal protein L30; n=6;
Eukaryota|Rep: 60S ribosomal protein L30 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 105
Score = 121 bits (292), Expect = 5e-27
Identities = 57/88 (64%), Positives = 73/88 (82%)
Frame = -3
Query: 315 KTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAK 136
K+ ESIN +LALV+KSGKY LGYK T+K+LRQGK+KL+IIA N P LRKSE+EYYA+L+K
Sbjct: 5 KSQESINQKLALVIKSGKYTLGYKSTVKSLRQGKSKLIIIAANTPVLRKSELEYYAMLSK 64
Query: 135 TGVHHYSGNNIELGTACGKYYRVCTLAI 52
T V+++ G N ELGTA GK +RV ++I
Sbjct: 65 TKVYYFQGGNNELGTAVGKLFRVGVVSI 92
>UniRef50_Q9XG43 Cluster: 60S ribosomal protein L30; n=1; Guillardia
theta|Rep: 60S ribosomal protein L30 - Guillardia theta
(Cryptomonas phi)
Length = 107
Score = 110 bits (265), Expect = 9e-24
Identities = 49/92 (53%), Positives = 65/92 (70%)
Frame = -3
Query: 324 KQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYAL 145
K K T E ++S+L +++K+GK+ GYK TLK LR GK K++II N PLRK E+EYYA+
Sbjct: 5 KNKSTSELLSSKLKIIIKTGKFSYGYKATLKNLRSGKCKMIIITDNCIPLRKLELEYYAM 64
Query: 144 LAKTGVHHYSGNNIELGTACGKYYRVCTLAIT 49
L K VHH+ GNN++LG +CGK Y L IT
Sbjct: 65 LNKCHVHHFYGNNVDLGLSCGKSYGCSCLGIT 96
>UniRef50_A2DH05 Cluster: 60S ribosomal protein L30, putative; n=5;
Eukaryota|Rep: 60S ribosomal protein L30, putative -
Trichomonas vaginalis G3
Length = 112
Score = 103 bits (246), Expect = 2e-21
Identities = 49/92 (53%), Positives = 65/92 (70%)
Frame = -3
Query: 327 KKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYA 148
KK + ESI + L+LV KSGKY LG QTLK+LR G+AKLVI A N P +S IEYYA
Sbjct: 4 KKLSRARESIINSLSLVTKSGKYSLGISQTLKSLRNGEAKLVIFASNVAPAHRSLIEYYA 63
Query: 147 LLAKTGVHHYSGNNIELGTACGKYYRVCTLAI 52
+L+ + + G+N++LGTACGKY+R ++I
Sbjct: 64 MLSGCDILPFDGDNVDLGTACGKYFRSSVISI 95
>UniRef50_UPI0000E81F40 Cluster: PREDICTED: similar to ribosomal
protein L30; n=1; Gallus gallus|Rep: PREDICTED: similar
to ribosomal protein L30 - Gallus gallus
Length = 131
Score = 95.5 bits (227), Expect = 4e-19
Identities = 42/45 (93%), Positives = 43/45 (95%)
Frame = -3
Query: 177 LRKSEIEYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITXP 43
LRKSEIEYYA+LAKTGVHHYSGNNIELGTACGKYYRVCTLAI P
Sbjct: 71 LRKSEIEYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDP 115
>UniRef50_A0BYD7 Cluster: Chromosome undetermined scaffold_137,
whole genome shotgun sequence; n=5; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_137,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 201
Score = 94.3 bits (224), Expect = 8e-19
Identities = 41/72 (56%), Positives = 56/72 (77%)
Frame = -3
Query: 306 ESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGV 127
ES+N +L LV++SGK +GYKQTLK +R G AKLV I+ N P +RK++IEYYA+LA+ +
Sbjct: 8 ESVNQKLQLVVRSGKITMGYKQTLKAIRNGTAKLVFISNNCPTIRKTQIEYYAMLAQITI 67
Query: 126 HHYSGNNIELGT 91
Y GNN++LGT
Sbjct: 68 VLYQGNNVDLGT 79
>UniRef50_Q7QQS4 Cluster: GLP_24_9208_8879; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_24_9208_8879 - Giardia lamblia ATCC
50803
Length = 109
Score = 86.2 bits (204), Expect = 2e-16
Identities = 41/89 (46%), Positives = 60/89 (67%)
Frame = -3
Query: 318 KKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLA 139
KK +SI+ L LV+KSGKY LG Q ++ +R GKA+LV +A N PPL KS+++Y L+
Sbjct: 8 KKAQDSISLTLTLVVKSGKYTLGTDQAIRNIRDGKAQLVFMANNCPPLVKSQVDYLCHLS 67
Query: 138 KTGVHHYSGNNIELGTACGKYYRVCTLAI 52
KT V ++G++ ELG A G+ + V + I
Sbjct: 68 KTPVRVFAGSSRELGIAVGRQFNVSIMTI 96
>UniRef50_Q8U0M6 Cluster: 50S ribosomal protein L30e; n=3;
Pyrococcus|Rep: 50S ribosomal protein L30e - Pyrococcus
furiosus
Length = 99
Score = 74.5 bits (175), Expect = 7e-13
Identities = 36/82 (43%), Positives = 52/82 (63%)
Frame = -3
Query: 288 LALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHHYSGN 109
L M++GK LG +T++ + G AKL+I+AKNAP K +I YYA L+ V+ + G
Sbjct: 7 LRKAMETGKVVLGSNETIRLAKTGGAKLIIVAKNAPKEIKDDIYYYAKLSDIPVYEFEGT 66
Query: 108 NIELGTACGKYYRVCTLAITXP 43
++ELGT GK + V +LAI P
Sbjct: 67 SVELGTLLGKPFVVASLAIVDP 88
>UniRef50_O27127 Cluster: 50S ribosomal protein L30e; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L30e -
Methanobacterium thermoautotrophicum
Length = 98
Score = 73.3 bits (172), Expect = 2e-12
Identities = 34/86 (39%), Positives = 55/86 (63%)
Frame = -3
Query: 300 INSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHH 121
I+ + + + +G LG K+T+++L+ GK KLV++A N P K +IEYYA L++ V+
Sbjct: 3 IDRGIRVAVDTGNVILGSKRTIQSLKLGKGKLVVMASNIPEDLKEDIEYYAKLSEIPVYT 62
Query: 120 YSGNNIELGTACGKYYRVCTLAITXP 43
+ G ++ELG+ CGK + V L I P
Sbjct: 63 HEGTSVELGSVCGKPFTVGALLIQDP 88
>UniRef50_Q8TXJ0 Cluster: 50S ribosomal protein L30e; n=6;
Archaea|Rep: 50S ribosomal protein L30e - Methanopyrus
kandleri
Length = 109
Score = 71.7 bits (168), Expect = 5e-12
Identities = 33/86 (38%), Positives = 54/86 (62%)
Frame = -3
Query: 309 IESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTG 130
++ I ++ + +++G LG QT+K L+ GK KLVI+A N P + +IEYYA LA
Sbjct: 1 MQEIERQIRMAVETGDVVLGSNQTIKLLKLGKPKLVIVAANCPAEIREDIEYYAELADVP 60
Query: 129 VHHYSGNNIELGTACGKYYRVCTLAI 52
V Y G +++LG CG+ + V ++A+
Sbjct: 61 VFVYPGTSMDLGDVCGRPHVVASMAV 86
>UniRef50_Q9YAU3 Cluster: 50S ribosomal protein L30e; n=1; Aeropyrum
pernix|Rep: 50S ribosomal protein L30e - Aeropyrum
pernix
Length = 100
Score = 71.7 bits (168), Expect = 5e-12
Identities = 31/84 (36%), Positives = 54/84 (64%)
Frame = -3
Query: 303 SINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVH 124
S+ L ++K+G Y +G+KQ+LK ++ G+AK ++IA+N PP + ++EYYA LA +
Sbjct: 2 SVEKALKDLVKTGVYAMGFKQSLKAVKAGEAKAIVIAENTPPELRRKLEYYAKLAGIPII 61
Query: 123 HYSGNNIELGTACGKYYRVCTLAI 52
Y G +++G G+ + V LA+
Sbjct: 62 VYRGTRMDMGLVMGRRHGVSVLAV 85
>UniRef50_A4WNA1 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=1; Pyrobaculum arsenaticum DSM 13514|Rep: Ribosomal
protein L7Ae/L30e/S12e/Gadd45 - Pyrobaculum arsenaticum
(strain DSM 13514 / JCM 11321)
Length = 104
Score = 68.5 bits (160), Expect = 5e-11
Identities = 33/86 (38%), Positives = 51/86 (59%)
Frame = -3
Query: 300 INSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHH 121
I L + + +G +G+++T + L G KLVIIA NAP K +IEYYA LA +
Sbjct: 7 IGRELQVAINTGSVVIGFEETRRALLAGTPKLVIIAANAPKWAKDDIEYYAKLAGIPIFV 66
Query: 120 YSGNNIELGTACGKYYRVCTLAITXP 43
+ G++IELG A + +++ LA+ P
Sbjct: 67 FPGSSIELGAAAKRPHKIMALAVIDP 92
>UniRef50_Q8ZYQ6 Cluster: 50S ribosomal protein L30e; n=4;
Thermoproteaceae|Rep: 50S ribosomal protein L30e -
Pyrobaculum aerophilum
Length = 102
Score = 68.1 bits (159), Expect = 6e-11
Identities = 31/83 (37%), Positives = 52/83 (62%)
Frame = -3
Query: 300 INSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHH 121
I+ L + + +GK +G+++T K L G KL+I+A NAP + +IEYYA LA +
Sbjct: 4 ISRELQVAINTGKVVIGFEETKKALLTGAPKLIILAANAPKWARDDIEYYAKLAGVPIFV 63
Query: 120 YSGNNIELGTACGKYYRVCTLAI 52
+ G++IELG A + +++ LA+
Sbjct: 64 FPGSSIELGAAAKRPHKIMALAV 86
>UniRef50_A7I9N4 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=1; Candidatus Methanoregula boonei 6A8|Rep: Ribosomal
protein L7Ae/L30e/S12e/Gadd45 - Methanoregula boonei
(strain 6A8)
Length = 97
Score = 65.7 bits (153), Expect = 3e-10
Identities = 33/85 (38%), Positives = 51/85 (60%)
Frame = -3
Query: 297 NSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHHY 118
N+ L +K+G LG T K +++GKA++V+IA N P +S++ Y L +H +
Sbjct: 4 NASLRRAIKTGDVILGQNNTEKCIKEGKAQMVVIAANCPENFRSQLGSYENLF---IHTF 60
Query: 117 SGNNIELGTACGKYYRVCTLAITXP 43
G+++ LG ACGK + V TLAI P
Sbjct: 61 EGSSVALGKACGKPFMVSTLAIVSP 85
>UniRef50_O28389 Cluster: 50S ribosomal protein L30e; n=1;
Archaeoglobus fulgidus|Rep: 50S ribosomal protein L30e -
Archaeoglobus fulgidus
Length = 86
Score = 65.7 bits (153), Expect = 3e-10
Identities = 35/84 (41%), Positives = 50/84 (59%)
Frame = -3
Query: 300 INSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHH 121
+ + + V+K+G Y LG K TLK+LR G+AK VI+A N P +I+ Y +
Sbjct: 4 VETIIKTVLKTGGYRLGSKSTLKSLRNGEAKAVIVASNCPEEVLEKIKSY----DVKILV 59
Query: 120 YSGNNIELGTACGKYYRVCTLAIT 49
Y+G N+ELG CGK + V +AIT
Sbjct: 60 YNGTNMELGALCGKPFSVAAMAIT 83
>UniRef50_P54061 Cluster: 50S ribosomal protein L30e; n=8;
Archaea|Rep: 50S ribosomal protein L30e - Methanococcus
jannaschii
Length = 110
Score = 65.3 bits (152), Expect = 4e-10
Identities = 28/83 (33%), Positives = 50/83 (60%)
Frame = -3
Query: 300 INSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHH 121
+N + + +GK LG K+T+K ++ G+ KLV++A N P + +++YYA L+ V+
Sbjct: 9 VNKAIRTAVDTGKVILGSKRTIKFVKHGEGKLVVLAGNIPKDLEEDVKYYAKLSNIPVYQ 68
Query: 120 YSGNNIELGTACGKYYRVCTLAI 52
+ ++ELG CGK + V L +
Sbjct: 69 HKITSLELGAVCGKPFPVAALLV 91
>UniRef50_Q8SRU1 Cluster: 60S RIBOSOMAL PROTEIN L30; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L30
- Encephalitozoon cuniculi
Length = 108
Score = 62.1 bits (144), Expect = 4e-09
Identities = 29/86 (33%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Frame = -3
Query: 306 ESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLA-KTG 130
+++ S L L M++GKY +G+K+ +K++ KAK ++I+ N P ++ +EYY++LA
Sbjct: 9 DNVTSSLLLAMRTGKYIVGFKRAIKSVIMKKAKCLVISSNFPSTKRKLLEYYSVLAGGLP 68
Query: 129 VHHYSGNNIELGTACGKYYRVCTLAI 52
+ +S NN ELG+ + +R+ ++I
Sbjct: 69 IIFHSANNEELGSITERGHRLGCISI 94
>UniRef50_Q980R3 Cluster: 50S ribosomal protein L30e; n=4;
Sulfolobaceae|Rep: 50S ribosomal protein L30e -
Sulfolobus solfataricus
Length = 108
Score = 62.1 bits (144), Expect = 4e-09
Identities = 29/84 (34%), Positives = 48/84 (57%)
Frame = -3
Query: 303 SINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVH 124
S L ++K+GK G K+ +K ++ K K+VI+A K +I +YA L+ V+
Sbjct: 10 SFEGELKSLLKTGKVIFGAKRAIKYIKLSKVKMVIVASTLRGDLKQDIMHYAKLSNIPVY 69
Query: 123 HYSGNNIELGTACGKYYRVCTLAI 52
Y G+ +LGT CGK + + T++I
Sbjct: 70 EYKGSGWDLGTLCGKPFMISTISI 93
>UniRef50_Q2FPJ8 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=1; Methanospirillum hungatei JF-1|Rep: Ribosomal
protein L7Ae/L30e/S12e/Gadd45 - Methanospirillum
hungatei (strain JF-1 / DSM 864)
Length = 95
Score = 58.0 bits (134), Expect = 7e-08
Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Frame = -3
Query: 297 NSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGV--H 124
N+ L +K+GK LG +T ++ +G AKLV++A N P +E Y L K GV +
Sbjct: 4 NTSLRRAIKTGKVILGQNETKDSIEKGSAKLVVVAANCP----AEFSGY-LSGKDGVKTY 58
Query: 123 HYSGNNIELGTACGKYYRVCTLAI 52
Y G+ ++LG ACGK + V LAI
Sbjct: 59 TYEGSGVQLGRACGKPFIVSALAI 82
>UniRef50_Q0W8G7 Cluster: 50S ribosomal protein L30E; n=1;
uncultured methanogenic archaeon RC-I|Rep: 50S ribosomal
protein L30E - Uncultured methanogenic archaeon RC-I
Length = 101
Score = 55.2 bits (127), Expect = 5e-07
Identities = 29/86 (33%), Positives = 49/86 (56%)
Frame = -3
Query: 300 INSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHH 121
++ L V+++GK +G KQ +K ++G AKLVI+A N P K +I+ A ++
Sbjct: 5 LDKSLRSVVRTGKVLIGTKQAVKASQRGVAKLVIVATNCPGDVKKQIKE----ANIPMYE 60
Query: 120 YSGNNIELGTACGKYYRVCTLAITXP 43
+ G +++LG CGK Y V + + P
Sbjct: 61 FPGMSVDLGPICGKPYVVSAVTVLEP 86
>UniRef50_Q74MP1 Cluster: NEQ179; n=1; Nanoarchaeum equitans|Rep:
NEQ179 - Nanoarchaeum equitans
Length = 86
Score = 54.4 bits (125), Expect = 8e-07
Identities = 29/72 (40%), Positives = 40/72 (55%)
Frame = -3
Query: 267 GKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHHYSGNNIELGTA 88
GK +G +TLK L+ G+ V++AKN P K +IEYYA L+ V N ELG A
Sbjct: 13 GKAVIGTNKTLKLLKLGQLSAVVLAKNVPDYIKEDIEYYAKLSNIPVIQVDLFNDELGAA 72
Query: 87 CGKYYRVCTLAI 52
K ++V + I
Sbjct: 73 LKKRFKVSVVGI 84
>UniRef50_Q8PUR3 Cluster: 50S ribosomal protein L30e; n=4;
Methanosarcinaceae|Rep: 50S ribosomal protein L30e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 103
Score = 52.8 bits (121), Expect = 2e-06
Identities = 25/84 (29%), Positives = 44/84 (52%)
Frame = -3
Query: 303 SINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVH 124
+++ L +K+GK +G +T+ G AK+V++A N P K +++ V
Sbjct: 11 NVDKSLIKAVKTGKVIIGANRTVDAAENGSAKMVVLASNCPADIKKKVQE----TNVPVL 66
Query: 123 HYSGNNIELGTACGKYYRVCTLAI 52
Y G ++ELG CGK + + +AI
Sbjct: 67 EYEGTSVELGPVCGKPFTIAAMAI 90
>UniRef50_A2SQE2 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=1; Methanocorpusculum labreanum Z|Rep: Ribosomal
protein L7Ae/L30e/S12e/Gadd45 - Methanocorpusculum
labreanum (strain ATCC 43576 / DSM 4855 / Z)
Length = 96
Score = 50.4 bits (115), Expect = 1e-05
Identities = 28/82 (34%), Positives = 45/82 (54%)
Frame = -3
Query: 297 NSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHHY 118
N L MK+G+ LG K + + KA+LVIIAKNAP ++ + A ++ +
Sbjct: 4 NLSLRRAMKTGEVTLGQNSVEKIVAENKAELVIIAKNAPAQIRN---FLAANENVPLYEF 60
Query: 117 SGNNIELGTACGKYYRVCTLAI 52
G++ +LG CG+ + + LAI
Sbjct: 61 DGSSRQLGKECGRDHMISVLAI 82
>UniRef50_Q3LWG3 Cluster: Ribosomal protein L30; n=1; Bigelowiella
natans|Rep: Ribosomal protein L30 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 102
Score = 48.4 bits (110), Expect = 5e-05
Identities = 27/76 (35%), Positives = 36/76 (47%)
Frame = -3
Query: 279 VMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHHYSGNNIE 100
+ K G K+T+K L K +IIA N K I +Y LL K +SGN+ E
Sbjct: 24 IKKKNNLVKGKKETIKNLISNKISFLIIASNCLIDTKLHIFHYCLLYKVKFCFFSGNSKE 83
Query: 99 LGTACGKYYRVCTLAI 52
LG C ++ C L I
Sbjct: 84 LGQLCDLKHKACILGI 99
>UniRef50_A4GI98 Cluster: Ribosomal protein L30e; n=1; uncultured
marine bacterium HF10_29C11|Rep: Ribosomal protein L30e
- uncultured marine bacterium HF10_29C11
Length = 99
Score = 45.2 bits (102), Expect = 5e-04
Identities = 25/83 (30%), Positives = 42/83 (50%)
Frame = -3
Query: 300 INSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHH 121
++ +L + +G G +QTL +G A+LV++A N P ++ A + VH
Sbjct: 3 LSRQLKTAIATGSLLFGQRQTLDACARGDARLVLLAANCPSDYIDDLR--ARHPEVTVHQ 60
Query: 120 YSGNNIELGTACGKYYRVCTLAI 52
N ELG ACGK + + T+ +
Sbjct: 61 APVVNRELGVACGKPFSISTICV 83
>UniRef50_A0B560 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=1; Methanosaeta thermophila PT|Rep: Ribosomal protein
L7Ae/L30e/S12e/Gadd45 - Methanosaeta thermophila (strain
DSM 6194 / PT) (Methanothrixthermophila (strain DSM 6194
/ PT))
Length = 103
Score = 44.0 bits (99), Expect = 0.001
Identities = 26/87 (29%), Positives = 45/87 (51%)
Frame = -3
Query: 303 SINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVH 124
+I+ L +++GK LG +L+ +G AKL+I A + P + ++ + V+
Sbjct: 3 NIDRALRSSIRTGKVVLGSNSSLEHGLRGDAKLIIYASDCPEHVRQKLRSL----EVPVY 58
Query: 123 HYSGNNIELGTACGKYYRVCTLAITXP 43
Y + +LG ACGK + V LA+ P
Sbjct: 59 AYQSSGRDLGAACGKPFPVAALAVIEP 85
>UniRef50_Q00T87 Cluster: Chromosome 17 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 17 contig 1, DNA
sequence - Ostreococcus tauri
Length = 170
Score = 42.3 bits (95), Expect = 0.004
Identities = 24/52 (46%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = +2
Query: 194 AMITSFALPCRRVFKVCLYPKQYFPDFITKARRELIDSMVFF--CFFAATIL 343
A+ T+ P R+VF V LYP Y PD +T REL+ S FF CF A L
Sbjct: 114 AINTNLLAPLRKVFSVDLYPSVYRPDRMTIVSRELMPSAAFFEPCFGAIFFL 165
>UniRef50_A5ISF2 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=16; Staphylococcus|Rep: Ribosomal protein
L7Ae/L30e/S12e/Gadd45 - Staphylococcus aureus subsp.
aureus JH9
Length = 105
Score = 39.9 bits (89), Expect = 0.019
Identities = 30/90 (33%), Positives = 43/90 (47%)
Frame = -3
Query: 312 TIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKT 133
+I+ I + L L M++GK G + +++G KLVI+A +A I K
Sbjct: 2 SIDQILNFLGLAMRAGKVKTGESVIVNEIKKGNLKLVIVANDASDNTAKLITDKCKSYKV 61
Query: 132 GVHHYSGNNIELGTACGKYYRVCTLAITXP 43
+ GN ELG A GK RV + IT P
Sbjct: 62 PFRKF-GNRNELGIALGKGERV-NVGITDP 89
>UniRef50_Q41A26 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=1; Exiguobacterium sibiricum 255-15|Rep: Ribosomal
protein L7Ae/L30e/S12e/Gadd45 - Exiguobacterium
sibiricum 255-15
Length = 96
Score = 39.5 bits (88), Expect = 0.025
Identities = 26/58 (44%), Positives = 32/58 (55%)
Frame = -3
Query: 255 LGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHHYSGNNIELGTACG 82
+G KQTLK LR GKA VIIA +A K + A A V + + +ELG ACG
Sbjct: 27 VGQKQTLKALRSGKASEVIIADDADEHVKQALLDAAKQANVPVVNVP-SKLELGKACG 83
>UniRef50_Q7XYC7 Cluster: Ribosomal protein L30; n=1; Triticum
aestivum|Rep: Ribosomal protein L30 - Triticum aestivum
(Wheat)
Length = 75
Score = 39.5 bits (88), Expect = 0.025
Identities = 17/30 (56%), Positives = 23/30 (76%)
Frame = -3
Query: 321 QKKTIESINSRLALVMKSGKYCLGYKQTLK 232
+++ +IN++L LVMKSGKY LGYK LK
Sbjct: 24 RRRARRNINNKLQLVMKSGKYTLGYKTVLK 53
>UniRef50_P55858 Cluster: 50S ribosomal protein L7Ae; n=44;
Archaea|Rep: 50S ribosomal protein L7Ae - Sulfolobus
solfataricus
Length = 127
Score = 39.5 bits (88), Expect = 0.025
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Frame = -3
Query: 273 KSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLA--KTGVHHYSGNNIE 100
+SGK G +T K + +G+AKLVIIA++ P + + + LL K + Y +
Sbjct: 28 ESGKIKKGTNETTKAVERGQAKLVIIAEDVQP--EEIVAHLPLLCDEKKIPYVYVSSKKA 85
Query: 99 LGTACGKYYRVCTLAITXP 43
LG ACG + AI P
Sbjct: 86 LGEACGLQVATASAAILEP 104
>UniRef50_Q2RJM6 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=1; Moorella thermoacetica ATCC 39073|Rep: Ribosomal
protein L7Ae/L30e/S12e/Gadd45 - Moorella thermoacetica
(strain ATCC 39073)
Length = 102
Score = 39.1 bits (87), Expect = 0.033
Identities = 25/77 (32%), Positives = 39/77 (50%)
Frame = -3
Query: 309 IESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTG 130
+ +I S L L ++GK GY+ + LR K +LV++A++ P K+ I + +
Sbjct: 1 MNNIYSLLGLAYRAGKIVWGYQAVVAALRSQKVELVLLARDGSPGLKTRILRFCREYRRQ 60
Query: 129 VHHYSGNNIELGTACGK 79
Y N ELG A GK
Sbjct: 61 GLLYGYKN-ELGAALGK 76
>UniRef50_Q1FIZ9 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=3; Clostridiales|Rep: Ribosomal protein
L7Ae/L30e/S12e/Gadd45 - Clostridium phytofermentans ISDg
Length = 115
Score = 38.7 bits (86), Expect = 0.043
Identities = 25/85 (29%), Positives = 41/85 (48%)
Frame = -3
Query: 324 KQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYAL 145
K T + + S L L K+G G T K++++GKA +VI+A++A K
Sbjct: 8 KAAATKKRVMSLLGLATKAGYVASGEFSTEKSVKEGKACVVIVAEDASENTKKMFRNMCT 67
Query: 144 LAKTGVHHYSGNNIELGTACGKYYR 70
++ + G +LG A GK +R
Sbjct: 68 FYDVPIYIF-GEKTDLGHAIGKEFR 91
>UniRef50_Q9Z9M0 Cluster: Putative ribosomal protein L7Ae-like; n=7;
Firmicutes|Rep: Putative ribosomal protein L7Ae-like -
Bacillus halodurans
Length = 82
Score = 38.3 bits (85), Expect = 0.057
Identities = 24/68 (35%), Positives = 38/68 (55%)
Frame = -3
Query: 255 LGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHHYSGNNIELGTACGKY 76
+G KQTLK L Q + V+IAK+A P +++E A + + + Y + +LG ACG
Sbjct: 14 IGTKQTLKALEQEEVLEVVIAKDAEPRVVNKVEAMASVKQIPI-IYVDSMKKLGKACGID 72
Query: 75 YRVCTLAI 52
T+A+
Sbjct: 73 VGAATVAL 80
>UniRef50_Q97S58 Cluster: Ribosomal protein L7A family; n=43;
Lactobacillales|Rep: Ribosomal protein L7A family -
Streptococcus pneumoniae
Length = 99
Score = 36.3 bits (80), Expect = 0.23
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Frame = -3
Query: 306 ESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIE----YYALLA 139
+ I++ L L ++G+ G + +K ++ GKAKLV +A +A P +I+ YY +
Sbjct: 4 QKISNLLGLAQRAGRIISGEELVVKAIQDGKAKLVFLAHDAGPNLTKKIQDKSHYYQVEI 63
Query: 138 KTGVHHYSGNNIELGTACGKYYRVCTLAIT 49
T + +EL A GK +V LA+T
Sbjct: 64 VTVF-----STLELSIAVGKSRKV--LAVT 86
>UniRef50_Q835U9 Cluster: Ribosomal protein L7A family; n=2;
Lactobacillales|Rep: Ribosomal protein L7A family -
Enterococcus faecalis (Streptococcus faecalis)
Length = 101
Score = 35.9 bits (79), Expect = 0.31
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = -3
Query: 288 LALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIE 157
L L M++GK G + TLK +R KAK V +A++A + +I+
Sbjct: 11 LGLAMRAGKLVTGEELTLKDIRANKAKFVFVAQDASENTRKKIK 54
>UniRef50_A7Q291 Cluster: Chromosome chr13 scaffold_45, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr13 scaffold_45, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 49
Score = 35.9 bits (79), Expect = 0.31
Identities = 13/23 (56%), Positives = 19/23 (82%)
Frame = -3
Query: 111 NNIELGTACGKYYRVCTLAITXP 43
+N++LGTACGKY++V L+I P
Sbjct: 14 DNVDLGTACGKYFQVSCLSIVDP 36
>UniRef50_A5KLN0 Cluster: Putative uncharacterized protein; n=2;
Ruminococcus|Rep: Putative uncharacterized protein -
Ruminococcus torques ATCC 27756
Length = 93
Score = 35.1 bits (77), Expect = 0.54
Identities = 27/75 (36%), Positives = 35/75 (46%)
Frame = -3
Query: 276 MKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHHYSGNNIEL 97
MK+GK G T + GKAK VI+A +A K + K Y G+ L
Sbjct: 1 MKAGKCVSGETMTESETKSGKAKFVIVAGDASENTKKKFGDMCKFYKVPFCFY-GDKDTL 59
Query: 96 GTACGKYYRVCTLAI 52
G A GK +R +LAI
Sbjct: 60 GHAMGKEFR-ASLAI 73
>UniRef50_A3DE45 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=3; Clostridiales|Rep: Ribosomal protein
L7Ae/L30e/S12e/Gadd45 - Clostridium thermocellum (strain
ATCC 27405 / DSM 1237)
Length = 117
Score = 35.1 bits (77), Expect = 0.54
Identities = 25/77 (32%), Positives = 36/77 (46%)
Frame = -3
Query: 300 INSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHH 121
I S L L K+ K GY+ + L+ GKA+LVI+A++A K + K +
Sbjct: 6 IYSFLGLARKANKLAAGYESCERLLKAGKAELVIVAEDASQNTKKKFIDACNYRKVDIRI 65
Query: 120 YSGNNIELGTACGKYYR 70
+ G LG GK R
Sbjct: 66 F-GKKELLGKFIGKDIR 81
>UniRef50_A5ZAJ2 Cluster: Putative uncharacterized protein; n=1;
Eubacterium ventriosum ATCC 27560|Rep: Putative
uncharacterized protein - Eubacterium ventriosum ATCC
27560
Length = 101
Score = 34.7 bits (76), Expect = 0.71
Identities = 25/89 (28%), Positives = 39/89 (43%)
Frame = -3
Query: 309 IESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTG 130
+ + S + L ++GK G K ++ KAK+VI++ + K E K
Sbjct: 1 MNKVFSMIGLATRAGKTVAGEFSVEKAVKDNKAKVVIVSTESSDNTKKLFENKCKFYKIP 60
Query: 129 VHHYSGNNIELGTACGKYYRVCTLAITXP 43
V Y G ELG A G R ++A+ P
Sbjct: 61 VFIY-GTKAELGMATGNKER-ASIAVLDP 87
>UniRef50_Q18BH0 Cluster: Putative ribosomal protein precursor; n=1;
Clostridium difficile 630|Rep: Putative ribosomal
protein precursor - Clostridium difficile (strain 630)
Length = 103
Score = 34.3 bits (75), Expect = 0.94
Identities = 24/80 (30%), Positives = 37/80 (46%)
Frame = -3
Query: 318 KKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLA 139
K E + S L L ++GK G TL L++GK L++IA++A K + +
Sbjct: 2 KNNKEKVLSFLGLATRAGKIVSGDDSTLLDLKKGKVNLILIAEDASNNTKKLFKDKSTFR 61
Query: 138 KTGVHHYSGNNIELGTACGK 79
+S E+G A GK
Sbjct: 62 NIPYLFFSTKE-EIGFAIGK 80
>UniRef50_A6W8L6 Cluster: Type III secretion exporter; n=1;
Kineococcus radiotolerans SRS30216|Rep: Type III
secretion exporter - Kineococcus radiotolerans SRS30216
Length = 360
Score = 34.3 bits (75), Expect = 0.94
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = -3
Query: 309 IESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNA--PPLRKSEI 160
I ++ L L++ +G Y + Y++T+K LR K + + KNA PL K I
Sbjct: 187 IVAVTVLLGLIIAAGDYAMSYRRTMKKLRMSKQDIKMEHKNAEGDPLLKGAI 238
>UniRef50_P62495 Cluster: Eukaryotic peptide chain release factor
subunit 1; n=137; Eukaryota|Rep: Eukaryotic peptide
chain release factor subunit 1 - Homo sapiens (Human)
Length = 437
Score = 34.3 bits (75), Expect = 0.94
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -3
Query: 270 SGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLR 172
+GKYC G + TLK L G +++I+ +N +R
Sbjct: 298 TGKYCFGVEDTLKALEMGAVEILIVYENLDIMR 330
>UniRef50_Q190U6 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=2; Desulfitobacterium hafniense|Rep: Ribosomal protein
L7Ae/L30e/S12e/Gadd45 - Desulfitobacterium hafniense
(strain DCB-2)
Length = 98
Score = 33.9 bits (74), Expect = 1.2
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = -3
Query: 309 IESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRK 169
+E I S L L ++GK G Q L++GK L+I+A++AP K
Sbjct: 2 LERIYSLLGLARRAGKITSGESQIEVMLKKGKGFLLILAEDAPGTHK 48
>UniRef50_A6TRK8 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=1; Alkaliphilus metalliredigens QYMF|Rep: Ribosomal
protein L7Ae/L30e/S12e/Gadd45 - Alkaliphilus
metalliredigens QYMF
Length = 103
Score = 33.5 bits (73), Expect = 1.6
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Frame = -3
Query: 306 ESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAK----NAPPLRKSEIEYYALLA 139
E + L L MKSG G + K L++GK L+++AK N L + YY +
Sbjct: 3 ERTKNLLGLGMKSGSLISGEENCKKELKKGKVYLILLAKDSSDNTTKLFNDKCTYYQVPI 62
Query: 138 KT-GVHHYSGNNI 103
+T G GN I
Sbjct: 63 RTVGTKEILGNCI 75
>UniRef50_A2BJ73 Cluster: Ferrous iron transport protein; n=1;
Hyperthermus butylicus DSM 5456|Rep: Ferrous iron
transport protein - Hyperthermus butylicus (strain DSM
5456 / JCM 9403)
Length = 717
Score = 33.5 bits (73), Expect = 1.6
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = -3
Query: 255 LGYKQTLKTLRQGK-AKLVIIAKNAPPLRKSEIEYYALLAKTG-VHHYSGNNIELGTACG 82
+G+K KTL++GK KLV+ P + KS + + L KT V ++ G +EL A
Sbjct: 5 IGHKSGTKTLQKGKDCKLVVALVGNPNVGKSTL-FNTLTGKTAHVANWPGVTVELEAAVS 63
Query: 81 KY 76
+Y
Sbjct: 64 RY 65
>UniRef50_Q6KZI7 Cluster: 50S ribosomal protein L7Ae; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L7Ae -
Picrophilus torridus
Length = 127
Score = 33.5 bits (73), Expect = 1.6
Identities = 15/41 (36%), Positives = 28/41 (68%)
Frame = -3
Query: 273 KSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYY 151
K+GK G + +K++ +G++KLV+IA++ P +E+ YY
Sbjct: 26 KTGKVRKGTNEVVKSIERGESKLVVIAEDVSP---AEVVYY 63
>UniRef50_Q7R1P2 Cluster: GLP_28_32750_32382; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_28_32750_32382 - Giardia lamblia
ATCC 50803
Length = 122
Score = 32.7 bits (71), Expect = 2.9
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Frame = -3
Query: 252 GYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLA--KTGVHH-YSGNNIELGTAC 85
G + LK + +GKA+LVIIA +A P+ EI + LA GV + + G+ LG AC
Sbjct: 35 GANEALKQVNRGKAELVIIAADADPI---EIVLHLPLACEDKGVPYVFIGSKNALGRAC 90
>UniRef50_P55768 Cluster: Probable ribosomal protein in infB
5'region; n=2; Enterococcus faecium|Rep: Probable
ribosomal protein in infB 5'region - Enterococcus
faecium (Streptococcus faecium)
Length = 103
Score = 32.7 bits (71), Expect = 2.9
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = -3
Query: 288 LALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIE 157
+ L M++GK G + T+ +R KAK+V +A +A K +++
Sbjct: 13 IGLAMRAGKLITGEELTIADIRNEKAKIVFVANDASENTKKKVK 56
>UniRef50_P80341 Cluster: 50S ribosomal protein L35; n=5;
Deinococci|Rep: 50S ribosomal protein L35 - Thermus
thermophilus
Length = 65
Score = 32.3 bits (70), Expect = 3.8
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = -3
Query: 345 PKMVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLR 172
PKM K KK ++ S + MK+GK L ++++ K +RQ K V+ A ++
Sbjct: 2 PKMKTHKGAKKRVKITASGKVVAMKTGKRHLNWQKSGKEIRQKGRKFVLAKPEAERIK 59
>UniRef50_Q3AB97 Cluster: Ribosomal protein L7ae family protein;
n=1; Carboxydothermus hydrogenoformans Z-2901|Rep:
Ribosomal protein L7ae family protein - Carboxydothermus
hydrogenoformans (strain Z-2901 / DSM 6008)
Length = 104
Score = 31.9 bits (69), Expect = 5.0
Identities = 21/72 (29%), Positives = 36/72 (50%)
Frame = -3
Query: 309 IESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTG 130
+ + L L K+ K +G + L ++GK + VI+A N +K +IE+ A T
Sbjct: 1 MNKVEGILGLAYKAKKLLVGETEVLLGFKRGKIEGVILAVNTSEKQKKKIEFLAKEQGTL 60
Query: 129 VHHYSGNNIELG 94
V ++ G E+G
Sbjct: 61 VVNW-GTKEEIG 71
>UniRef50_P34667 Cluster: Uncharacterized protein ZK686.1; n=1;
Caenorhabditis elegans|Rep: Uncharacterized protein
ZK686.1 - Caenorhabditis elegans
Length = 44
Score = 31.9 bits (69), Expect = 5.0
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = -3
Query: 282 LVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKN 187
+VMK+G+Y L Y+Q LK+L AKLVI K+
Sbjct: 1 MVMKTGQYVL-YEQKLKSLLNENAKLVINTKH 31
>UniRef50_Q8ZTA5 Cluster: 50S ribosomal protein L7Ae; n=7;
Archaea|Rep: 50S ribosomal protein L7Ae - Pyrobaculum
aerophilum
Length = 151
Score = 31.9 bits (69), Expect = 5.0
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = -3
Query: 288 LALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPP 178
L++ ++GK G +T K + +G AKLV+IA++ P
Sbjct: 38 LSIARQTGKIKKGTNETTKAVERGLAKLVLIAEDVDP 74
>UniRef50_UPI0000DB701B Cluster: PREDICTED: similar to CG11847-PA
isoform 1; n=1; Apis mellifera|Rep: PREDICTED: similar
to CG11847-PA isoform 1 - Apis mellifera
Length = 929
Score = 31.5 bits (68), Expect = 6.6
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = -3
Query: 351 YAPKMVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQ 220
Y K AAKKQ+KTIES + L K K L QT+ ++ +
Sbjct: 422 YNQKRSAAKKQQKTIESQDKALKSAEKKTKQTLKEVQTIHSINK 465
>UniRef50_Q81Y70 Cluster: Acetyl-CoA acetyltransferase; n=11;
Bacillus|Rep: Acetyl-CoA acetyltransferase - Bacillus
anthracis
Length = 363
Score = 31.5 bits (68), Expect = 6.6
Identities = 18/71 (25%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Frame = -3
Query: 258 CLGYKQTLKTLRQGKAKLVIIAKNA--PPLRKSEIEYYALLAKTGVHHYSGNNIELGTAC 85
CL YK+TL+ L +G I++ N K E+ Y ++ +T + G +C
Sbjct: 157 CLSYKRTLQALAKGYIHEEILSFNGLLDESIKPEMNYERIIKRTKPAFLHNGTVTAGNSC 216
Query: 84 GKYYRVCTLAI 52
G C + +
Sbjct: 217 GVNDGACAVLV 227
>UniRef50_Q03FS4 Cluster: Ribosomal protein HS6-type; n=1;
Pediococcus pentosaceus ATCC 25745|Rep: Ribosomal
protein HS6-type - Pediococcus pentosaceus (strain ATCC
25745 / 183-1w)
Length = 100
Score = 31.5 bits (68), Expect = 6.6
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = -3
Query: 306 ESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEI 160
E+I+ L L+ +SG G + L ++R KAK V++ ++ K +I
Sbjct: 4 ENISKYLGLMRRSGNLVTGQELVLSSIRSQKAKFVLVTEDIGESSKKKI 52
>UniRef50_Q5KA50 Cluster: Expressed protein; n=1; Filobasidiella
neoformans|Rep: Expressed protein - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 289
Score = 31.5 bits (68), Expect = 6.6
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = +2
Query: 179 GGAFLAMITSFALPCRRVFKVCLYPKQYF----PDFITKARRELIDSMVFF 319
GG F A++ S+ PC F +CL+P + D +++ RR +VFF
Sbjct: 130 GGMFEALLPSYIPPCHISFDLCLFPTEQVWSNRDDNLSRLRRLTNFLLVFF 180
>UniRef50_UPI0000D9F481 Cluster: PREDICTED: similar to eukaryotic
translation termination factor 1; n=2; Macaca
mulatta|Rep: PREDICTED: similar to eukaryotic
translation termination factor 1 - Macaca mulatta
Length = 136
Score = 31.1 bits (67), Expect = 8.7
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -3
Query: 267 GKYCLGYKQTLKTLRQGKAKLVIIAKN 187
GKYC G + +LK L+ G + +I+ +N
Sbjct: 2 GKYCFGIEDSLKALKMGAVETLIVFEN 28
>UniRef50_Q8ZY90 Cluster: ATP-dependent, DNA binding helicase; n=4;
Pyrobaculum|Rep: ATP-dependent, DNA binding helicase -
Pyrobaculum aerophilum
Length = 704
Score = 31.1 bits (67), Expect = 8.7
Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 1/81 (1%)
Frame = -3
Query: 366 GFISIYAPKMVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKN 187
G ++ P++ A K + +N L SGK L ++KT +GK L +
Sbjct: 20 GVRELFPPQVEAVKAG--IFDGVNLLLCTATASGKSLLAEVASVKTALEGKMALYAVPLK 77
Query: 186 APPLRK-SEIEYYALLAKTGV 127
A K YY LA+ G+
Sbjct: 78 ALAQEKLLHFSYYGKLARVGI 98
>UniRef50_A0RUB4 Cluster: Ribosomal protein H6-type; n=1;
Cenarchaeum symbiosum|Rep: Ribosomal protein H6-type -
Cenarchaeum symbiosum
Length = 126
Score = 31.1 bits (67), Expect = 8.7
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = -3
Query: 318 KKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPP 178
K + I L +SGK G + K + +G +KLV+IA++ P
Sbjct: 13 KDLVNPILEALRAATQSGKVKKGTNEATKAIERGTSKLVVIAEDVEP 59
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 390,933,685
Number of Sequences: 1657284
Number of extensions: 6768860
Number of successful extensions: 15854
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 15563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15843
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 17773009086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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