Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_P22
         (718 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0CHH1 Cluster: Chromosome undetermined scaffold_181, w...    36   0.76 
UniRef50_A2U5L6 Cluster: Abortive infection protein; n=1; Bacill...    33   9.3  
UniRef50_Q22BL3 Cluster: Zinc finger protein; n=1; Tetrahymena t...    33   9.3  

>UniRef50_A0CHH1 Cluster: Chromosome undetermined scaffold_181,
           whole genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_181,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 145

 Score = 36.3 bits (80), Expect = 0.76
 Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
 Frame = -2

Query: 450 RLLID*YVVRS*MFSVKF-YLQFYLNN-----NFVEKIYSNIIL**ITHRYVHFF*IHS* 289
           RLL D YVV    + ++  YLQ ++ N     N+   IYSN  L  +T RY HF   +S 
Sbjct: 45  RLLADSYVVTQLQYPIQMHYLQLFITNQWQIDNYTINIYSNHPLLLLTSRYSHF--KYSL 102

Query: 288 PFYVNFIVKICFNLPRNLFV*KYDITMKKCQILRL 184
            FY ++ + I F    +  +  Y    K+C  L L
Sbjct: 103 LFYKSYYLNIPFYHSSSFII--YSNLDKQCHQLIL 135


>UniRef50_A2U5L6 Cluster: Abortive infection protein; n=1; Bacillus
           coagulans 36D1|Rep: Abortive infection protein -
           Bacillus coagulans 36D1
          Length = 233

 Score = 32.7 bits (71), Expect = 9.3
 Identities = 11/29 (37%), Positives = 22/29 (75%)
 Frame = +1

Query: 196 LALFHCNIIFLYEKITW*IKANFNDKIYI 282
           +++F  N++FL +K+TW IK++F + + I
Sbjct: 34  VSVFFLNVLFLKQKVTWRIKSSFKETLLI 62


>UniRef50_Q22BL3 Cluster: Zinc finger protein; n=1; Tetrahymena
           thermophila SB210|Rep: Zinc finger protein - Tetrahymena
           thermophila SB210
          Length = 260

 Score = 32.7 bits (71), Expect = 9.3
 Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
 Frame = +1

Query: 157 KKNCFHSSF*AKNLALFHCNIIFLYEKITW*IKANFNDKIYIKRLTMYL--KKMYISVRY 330
           K NC      AK++ LF  NIIFL   +TW ++A      ++K+  MY+  ++      Y
Sbjct: 6   KLNCMSDPKAAKHVILF--NIIFLLSDVTWVLRAEI---FFLKQYEMYIHPERYQFEQMY 60

Query: 331 LLQNNITVD 357
               NI ++
Sbjct: 61  YEMQNIEIE 69


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 563,743,718
Number of Sequences: 1657284
Number of extensions: 9914359
Number of successful extensions: 19137
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19134
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57851245060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)