Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_P21
(438 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69883-3|CAA93741.2| 450|Caenorhabditis elegans Hypothetical pr... 34 0.052
AL021481-5|CAA16336.2| 455|Caenorhabditis elegans Hypothetical ... 33 0.069
AF025468-4|AAB71045.1| 449|Caenorhabditis elegans Hypothetical ... 33 0.091
Z97191-2|CAB10025.1| 481|Caenorhabditis elegans Hypothetical pr... 31 0.37
Z30423-12|CAA83006.2| 486|Caenorhabditis elegans Hypothetical p... 31 0.37
AF031935-1|AAB87066.1| 486|Caenorhabditis elegans UNC-47 protein. 31 0.37
AF047658-3|ABC71828.1| 315|Caenorhabditis elegans Hypothetical ... 29 1.5
AC006807-4|AAK84618.1| 904|Caenorhabditis elegans Hypothetical ... 27 4.5
U21854-1|AAA87454.1| 310|Caenorhabditis elegans cCAF1 protein p... 27 6.0
AL132860-28|CAB60501.1| 310|Caenorhabditis elegans Hypothetical... 27 6.0
AC103567-4|AAL35731.2| 598|Caenorhabditis elegans Hypothetical ... 27 6.0
Z81112-3|CAB03273.1| 656|Caenorhabditis elegans Hypothetical pr... 27 7.9
>Z69883-3|CAA93741.2| 450|Caenorhabditis elegans Hypothetical
protein C27C12.4 protein.
Length = 450
Score = 33.9 bits (74), Expect = 0.052
Identities = 18/55 (32%), Positives = 34/55 (61%), Gaps = 7/55 (12%)
Frame = -2
Query: 254 FFYSFLGLIAPSILD-LIFKWERGLGRNNWI------LFKDLFLIFFGCFVLVAG 111
FF++F ++ PSI+ L KW + +G + ++ L+ +++L++FG VL AG
Sbjct: 59 FFFTFFNIVIPSIVQKLGAKWSQIIGASGYLFFMLTFLYLNVWLLYFGSAVLGAG 113
>AL021481-5|CAA16336.2| 455|Caenorhabditis elegans Hypothetical
protein Y43F4B.7 protein.
Length = 455
Score = 33.5 bits (73), Expect = 0.069
Identities = 29/119 (24%), Positives = 48/119 (40%), Gaps = 1/119 (0%)
Frame = -2
Query: 425 LQFYVPMEIVWRNTKDHVAQKYHNITEAVMRXXXXXXXXXXXXXLPSLEQVIGLEGAFFY 246
LQFYVPME + + + + + R +P L I L GAF
Sbjct: 339 LQFYVPMERIEKWITRKIPVDKQTLYIYIARYSGVILTCAIAELIPHLALFISLIGAFSG 398
Query: 245 SFLGLIAPSILDLIFKWERG-LGRNNWILFKDLFLIFFGCFVLVAGXTQSXRERMRTRA 72
+ + L+ P ++L+ + + L WI K++ L+ F G + E +T A
Sbjct: 399 ASMALLFPPCIELLTSYAKNELSTGLWI--KNIVLLTFAFIGFTTGTYSALIEIAKTFA 455
>AF025468-4|AAB71045.1| 449|Caenorhabditis elegans Hypothetical
protein T27A1.5 protein.
Length = 449
Score = 33.1 bits (72), Expect = 0.091
Identities = 25/105 (23%), Positives = 43/105 (40%)
Frame = -2
Query: 425 LQFYVPMEIVWRNTKDHVAQKYHNITEAVMRXXXXXXXXXXXXXLPSLEQVIGLEGAFFY 246
LQFYVPME V + K V + +R +P L I L G+
Sbjct: 329 LQFYVPMERVEKWIKRKVVEAKQEPMIYAIRFGGVLLTCAMAQLIPHLALFISLVGSVAG 388
Query: 245 SFLGLIAPSILDLIFKWERGLGRNNWILFKDLFLIFFGCFVLVAG 111
+ L L+ P +++L+ + + W+ +++ L+ F G
Sbjct: 389 TSLTLVFPPLIELLCSYSK-QELTKWVWIRNIGLMAFAMVGFTTG 432
>Z97191-2|CAB10025.1| 481|Caenorhabditis elegans Hypothetical
protein H32K16.1 protein.
Length = 481
Score = 31.1 bits (67), Expect = 0.37
Identities = 28/117 (23%), Positives = 50/117 (42%), Gaps = 8/117 (6%)
Frame = -2
Query: 425 LQFYVPMEIVWRNTKDHVAQK---YHNITEAVMRXXXXXXXXXXXXXLPSLEQVIGLEGA 255
+Q YV ++++ + + +++ H + +R +P+L Q+I L G
Sbjct: 356 IQLYVIVQMLLPSLRSKISEDRKMVHRLLPYALRLGLMLISLCIALIVPNLMQIIPLVGI 415
Query: 254 FFYSFLGLIAPSILDL-----IFKWERGLGRNNWILFKDLFLIFFGCFVLVAGXTQS 99
+ LI PS LD +FK + + + L ++FL G F L AG S
Sbjct: 416 TSGLLISLILPSFLDCMVFLPVFKKQGDMFKFYQKLIINVFLFVLGWFFLGAGLYSS 472
>Z30423-12|CAA83006.2| 486|Caenorhabditis elegans Hypothetical
protein T20G5.6 protein.
Length = 486
Score = 31.1 bits (67), Expect = 0.37
Identities = 23/70 (32%), Positives = 35/70 (50%)
Frame = -2
Query: 290 PSLEQVIGLEGAFFYSFLGLIAPSILDLIFKWERGLGRNNWILFKDLFLIFFGCFVLVAG 111
P L +++GL G + L I P++ L K E+ L NN+ D +I GC V ++G
Sbjct: 413 PYLVELMGLVGNITGTMLSFIWPALFHLYIK-EKTL--NNFEKRFDQGIIIMGCSVCISG 469
Query: 110 XTQSXRERMR 81
S E +R
Sbjct: 470 VYFSSMELLR 479
>AF031935-1|AAB87066.1| 486|Caenorhabditis elegans UNC-47 protein.
Length = 486
Score = 31.1 bits (67), Expect = 0.37
Identities = 23/70 (32%), Positives = 35/70 (50%)
Frame = -2
Query: 290 PSLEQVIGLEGAFFYSFLGLIAPSILDLIFKWERGLGRNNWILFKDLFLIFFGCFVLVAG 111
P L +++GL G + L I P++ L K E+ L NN+ D +I GC V ++G
Sbjct: 413 PYLVELMGLVGNITGTMLSFIWPALFHLYIK-EKTL--NNFEKRFDQGIIIMGCSVCISG 469
Query: 110 XTQSXRERMR 81
S E +R
Sbjct: 470 VYFSSMELLR 479
>AF047658-3|ABC71828.1| 315|Caenorhabditis elegans Hypothetical
protein K03H6.4 protein.
Length = 315
Score = 29.1 bits (62), Expect = 1.5
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +3
Query: 270 YNLFKTW*RRCRNHSKSGKNRSHDCFRDVMVFL 368
Y + W CR H GK DC R M+FL
Sbjct: 55 YVVVTIWNSACRLHMGEGKTTRADCIRRPMMFL 87
>AC006807-4|AAK84618.1| 904|Caenorhabditis elegans Hypothetical
protein Y58A7A.4 protein.
Length = 904
Score = 27.5 bits (58), Expect = 4.5
Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
Frame = +3
Query: 198 LENEIQYGRGYETKEGVEESSF*AYNLF---KTW*RRCRNHSKSGKNRSHDCFRD 353
LE Y YE+ V++ YNLF + R H GK R H+ +D
Sbjct: 17 LEEMSNYAESYESDYEVDQQELHYYNLFEKPRGERRWLGKHHHGGKERLHNAVKD 71
>U21854-1|AAA87454.1| 310|Caenorhabditis elegans cCAF1 protein
protein.
Length = 310
Score = 27.1 bits (57), Expect = 6.0
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -3
Query: 259 ELSSTPSLVS*PRPYWISFSSG 194
EL +T L++ PR W++FSSG
Sbjct: 149 ELLTTSGLITDPRITWLTFSSG 170
>AL132860-28|CAB60501.1| 310|Caenorhabditis elegans Hypothetical
protein Y56A3A.20 protein.
Length = 310
Score = 27.1 bits (57), Expect = 6.0
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -3
Query: 259 ELSSTPSLVS*PRPYWISFSSG 194
EL +T L++ PR W++FSSG
Sbjct: 149 ELLTTSGLITDPRITWLTFSSG 170
>AC103567-4|AAL35731.2| 598|Caenorhabditis elegans Hypothetical
protein Y51F10.4 protein.
Length = 598
Score = 27.1 bits (57), Expect = 6.0
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -2
Query: 290 PSLEQVIGLEGAFFYSFLGLIAPSIL 213
P++E ++GL GAF S + I PS +
Sbjct: 380 PNVEFILGLTGAFIGSLVATILPSTI 405
>Z81112-3|CAB03273.1| 656|Caenorhabditis elegans Hypothetical
protein T02B5.3 protein.
Length = 656
Score = 26.6 bits (56), Expect = 7.9
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = -3
Query: 391 EILKIM*RKNTITSRKQS*ERFLPLLLWLRQRRYQVLNK 275
EILKI R+N + S K + L + W+++ R +V+NK
Sbjct: 563 EILKIE-RENFLKSEKLKRKSELEMSRWIKKGRKRVINK 600
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,143,980
Number of Sequences: 27780
Number of extensions: 170098
Number of successful extensions: 355
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 348
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 355
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 745968860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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