Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_P20
(688 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g28770.1 68416.m03591 expressed protein 39 0.003
At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almos... 35 0.058
At1g29000.1 68414.m03546 heavy-metal-associated domain-containin... 33 0.13
At3g29075.1 68416.m03637 glycine-rich protein 33 0.18
At4g03620.1 68417.m00497 myosin heavy chain-related contains wea... 32 0.41
At4g02640.2 68417.m00359 bZIP transcription factor family protei... 32 0.41
At4g02640.1 68417.m00358 bZIP transcription factor family protei... 32 0.41
At1g56660.1 68414.m06516 expressed protein 32 0.41
At5g41780.1 68418.m05087 myosin heavy chain-related weak similar... 31 0.54
At3g26050.1 68416.m03244 expressed protein 30 1.3
At3g04960.1 68416.m00538 expressed protein low similarity to SP|... 30 1.3
At1g77580.2 68414.m09032 myosin heavy chain-related low similari... 30 1.3
At1g80070.1 68414.m09373 splicing factor, putative strong simila... 30 1.7
At5g66540.1 68418.m08389 expressed protein ; supported by full-L... 29 2.2
At5g56030.1 68418.m06991 heat shock protein 81-2 (HSP81-2) nearl... 29 2.2
At5g56010.1 68418.m06989 heat shock protein, putative strong sim... 29 2.2
At4g19550.1 68417.m02875 expressed protein 29 2.2
At3g05830.1 68416.m00654 expressed protein 29 2.2
At3g05110.1 68416.m00555 hypothetical protein 29 2.2
At1g79280.1 68414.m09242 expressed protein weak similarity to Nu... 29 2.2
At1g18890.1 68414.m02351 calcium-dependent protein kinase 1 (CDP... 29 2.2
At5g63640.1 68418.m07990 VHS domain-containing protein / GAT dom... 29 2.9
At5g61150.2 68418.m07672 leo1-like family protein weak similarit... 29 2.9
At5g61150.1 68418.m07671 leo1-like family protein weak similarit... 29 2.9
At5g60530.1 68418.m07590 late embryogenesis abundant protein-rel... 29 2.9
At5g57830.1 68418.m07232 expressed protein contains Pfam profile... 29 2.9
At5g56000.1 68418.m06988 heat shock protein 81-4 (HSP81-4) nearl... 29 2.9
At5g19310.1 68418.m02301 homeotic gene regulator, putative simil... 29 2.9
At4g38780.1 68417.m05491 splicing factor, putative strong simila... 29 2.9
At5g62190.1 68418.m07807 DEAD box RNA helicase (PRH75) nearly id... 29 3.8
At5g48610.1 68418.m06012 expressed protein ; expression supporte... 29 3.8
At5g52550.1 68418.m06525 expressed protein 28 5.0
At2g18540.1 68415.m02160 cupin family protein contains Pfam prof... 28 5.0
At1g27720.1 68414.m03388 transcription initiation factor IID (TF... 28 5.0
At5g54410.1 68418.m06777 hypothetical protein 28 6.7
At5g24880.1 68418.m02946 expressed protein ; expression supporte... 28 6.7
At2g34730.1 68415.m04265 myosin heavy chain-related low similari... 28 6.7
At1g60200.1 68414.m06781 splicing factor PWI domain-containing p... 28 6.7
At1g28450.1 68414.m03497 MADS-box family protein similar to MADS... 28 6.7
At5g66030.2 68418.m08315 Golgi-localized GRIP domain-containing ... 27 8.8
At5g66030.1 68418.m08314 Golgi-localized GRIP domain-containing ... 27 8.8
At4g26630.1 68417.m03837 expressed protein 27 8.8
At4g15730.1 68417.m02394 expressed protein 27 8.8
At2g41170.1 68415.m05085 F-box family protein contains Pfam PF00... 27 8.8
At2g31410.1 68415.m03838 expressed protein 27 8.8
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 39.1 bits (87), Expect = 0.003
Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Frame = -3
Query: 662 KDYHXRIARLE-DXKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAK 486
K H ++ + E D K E K + EI SQ N++ K K + + K E + +
Sbjct: 1140 KSQHVKLVKKESDKKEKKENEEKSETKEIESSKSQKNEVDKKEKKSSKDQQKKKEKEMKE 1199
Query: 485 LQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWSKGKPGDQK 354
++K + N + +KK+ ++EE K+K+ K KP D K
Sbjct: 1200 SEEKKLKKNEED-----RKKQTSVEENKKQKETKKEKNKPKDDK 1238
Score = 28.7 bits (61), Expect = 3.8
Identities = 20/64 (31%), Positives = 31/64 (48%)
Frame = -3
Query: 533 KPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWSKGKPGDQK 354
K T+ SK + K K +KK ++ N + K KKE+ E K++ K + K
Sbjct: 930 KDTINTSSKQKGKDKKKKKKESK-NSNMKKKEEDKKEYVNNELKKQEDNKKETTKSENSK 988
Query: 353 VKEE 342
+KEE
Sbjct: 989 LKEE 992
Score = 27.5 bits (58), Expect = 8.8
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 1/111 (0%)
Frame = -3
Query: 662 KDY-HXRIARLEDXKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAK 486
K+Y + + + ED K + K E + N + + K KK +YE K +K
Sbjct: 964 KEYVNNELKKQEDNKKETTKSENSKLKEENKDNKEKKESEDSASKNREKK--EYEEKKSK 1021
Query: 485 LQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWSKGKPGDQKVKEEEVE 333
+++A + ++Q KK+E E++ +E+K K + D K K++E E
Sbjct: 1022 TKEEAKKEKKKSQ---DKKRE---EKDSEERKSKKEKEESRDLKAKKKEEE 1066
>At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almost
identical to CIP1 (GI:836950) [Arabidopsis thaliana]
Length = 1305
Score = 34.7 bits (76), Expect = 0.058
Identities = 22/89 (24%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Frame = -3
Query: 647 RIARLEDXKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAA 468
++A L+ + +LE +++K EIS+ SQ+ +L+ + + KV +E+ ++ +
Sbjct: 880 QVASLDSQRAELEIQLEKKSEEISEYLSQITNLKEEII----NKVKVHESILEEINGLSE 935
Query: 467 EFNFRN-QLKVVKKKEFTLEEEDKEKKPD 384
+ R +L+ + K+ L+EE + KK +
Sbjct: 936 KIKGRELELETLGKQRSELDEELRTKKEE 964
>At1g29000.1 68414.m03546 heavy-metal-associated domain-containing
protein similar to farnesylated protein ATFP3
[GI:4097547]; contains Pfam profile PF00403:
Heavy-metal-associated domain
Length = 287
Score = 33.5 bits (73), Expect = 0.13
Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 1/117 (0%)
Frame = -3
Query: 686 EDTIKRVCKDYHXRIARLEDXKFDLEY-IVKRKDMEISDLNSQVNDLRGKFVKPTLKKVS 510
+D I+ H A+ + DL++ ++K K + I +++ L V+ T++
Sbjct: 109 KDVIRTTVLKVHIHCAQCDK---DLQHKLLKHKAIHIVKTDTKAQTLT---VQGTIESAK 162
Query: 509 KYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWSKGKPGDQKVKEEE 339
K+ K A + + + + KKKE EEDK+KK + K K D+K KEEE
Sbjct: 163 LLAYIKKKVHKHAEIISSKTEEE--KKKE----EEDKKKKEEEDKKKKEDEKKKEEE 213
Score = 29.5 bits (63), Expect = 2.2
Identities = 19/73 (26%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Frame = -3
Query: 539 FVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKE-KKPDWSKGKPG 363
++K + K ++ + + +KK E + + + + KKK+ +++++E KK + +K K G
Sbjct: 166 YIKKKVHKHAEIISSKTEEEKKKEEEDKKKKEEEDKKKKEDEKKKEEEKKKEEENKKKEG 225
Query: 362 DQKVKEEEVEA*T 324
++K +E +VE T
Sbjct: 226 EKKKEEVKVEVTT 238
>At3g29075.1 68416.m03637 glycine-rich protein
Length = 294
Score = 33.1 bits (72), Expect = 0.18
Identities = 21/85 (24%), Positives = 47/85 (55%)
Frame = -3
Query: 599 KRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEF 420
K+KD + NS+ ++ + K K K+ ++ + + +KK ++N ++ K KKK +
Sbjct: 168 KKKDKKKDGNNSEDDEFKKKKKKEQYKEHHD-DDDYDEKKKKKKDYNDDDEKK--KKKHY 224
Query: 419 TLEEEDKEKKPDWSKGKPGDQKVKE 345
++++K+KK +++ +K KE
Sbjct: 225 NDDDDEKKKKHNYNDDDDEKKKKKE 249
>At4g03620.1 68417.m00497 myosin heavy chain-related contains weak
similarity to Swiss-Prot:P24733 myosin heavy chain,
striated muscle [Aequipecten irradians]
Length = 342
Score = 31.9 bits (69), Expect = 0.41
Identities = 16/56 (28%), Positives = 33/56 (58%)
Frame = -3
Query: 518 KVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWSKGKPGDQKV 351
++S+ ++ ++++ ++F +N+ K++KK + E +KEKK D PGD V
Sbjct: 193 ELSRKAHELNEMEELVSDFRAQNE-KLLKKVQNCAVEHNKEKKEDIDGPGPGDNNV 247
>At4g02640.2 68417.m00359 bZIP transcription factor family protein
contains Pfam profile: PF00170 bZIP transcription
factor; identical to cDNA bZIP protein BZO2H1,
alternatively spliced GI:10954094
Length = 417
Score = 31.9 bits (69), Expect = 0.41
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = -3
Query: 599 KRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKF 492
+RK + SDL +QVNDL+G+ LK++S +K+
Sbjct: 240 RRKQEQTSDLETQVNDLKGEH-SSLLKQLSNMNHKY 274
>At4g02640.1 68417.m00358 bZIP transcription factor family protein
contains Pfam profile: PF00170 bZIP transcription
factor; identical to cDNA bZIP protein BZO2H1,
alternatively spliced GI:10954094
Length = 411
Score = 31.9 bits (69), Expect = 0.41
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = -3
Query: 599 KRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKF 492
+RK + SDL +QVNDL+G+ LK++S +K+
Sbjct: 234 RRKQEQTSDLETQVNDLKGEH-SSLLKQLSNMNHKY 268
>At1g56660.1 68414.m06516 expressed protein
Length = 522
Score = 31.9 bits (69), Expect = 0.41
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = -3
Query: 533 KPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWSKGKPGDQK 354
K L++ +NK + + E + K K+KE + EDK+ K KG+ GD +
Sbjct: 166 KEELEEEDGKKNKKKEKDESGTEEKKKKPKKEKKQKEESKSNEDKKVKGKKEKGEKGDLE 225
Query: 353 VKEEE 339
++EE
Sbjct: 226 KEDEE 230
Score = 31.5 bits (68), Expect = 0.54
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 7/94 (7%)
Frame = -3
Query: 599 KRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAK--LQKKAAEFNFRNQLKVVK-K 429
++K ++S ++ + GK K K S E K K +KK E + N+ K VK K
Sbjct: 156 EKKHEDVSQEKEELEEEDGKKNKKKEKDESGTEEKKKKPKKEKKQKEESKSNEDKKVKGK 215
Query: 428 KEF----TLEEEDKEKKPDWSKGKPGDQKVKEEE 339
KE LE+ED+EKK + + DQ++KE++
Sbjct: 216 KEKGEKGDLEKEDEEKKKEHDE---TDQEMKEKD 246
Score = 29.1 bits (62), Expect = 2.9
Identities = 23/87 (26%), Positives = 42/87 (48%)
Frame = -3
Query: 599 KRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEF 420
K+K+ S+ + +V + K K L+K E K + + E ++ K KK++
Sbjct: 199 KQKEESKSNEDKKVKGKKEKGEKGDLEKED--EEKKKEHDETDQEMKEKDSKKNKKKEKD 256
Query: 419 TLEEEDKEKKPDWSKGKPGDQKVKEEE 339
E+K+KKPD K + + KE++
Sbjct: 257 ESCAEEKKKKPDKEKKEKDESTEKEDK 283
Score = 29.1 bits (62), Expect = 2.9
Identities = 20/62 (32%), Positives = 34/62 (54%)
Frame = -3
Query: 524 LKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWSKGKPGDQKVKE 345
+K+ +NK + + AE + K K+K+ + E+EDK+ K KGK G++ KE
Sbjct: 242 MKEKDSKKNKKKEKDESCAEEKKKKPDKEKKEKDESTEKEDKKLK--GKKGK-GEKPEKE 298
Query: 344 EE 339
+E
Sbjct: 299 DE 300
Score = 27.9 bits (59), Expect = 6.7
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = -3
Query: 521 KKVSKYEN-KFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWSKGKPGDQKVKE 345
KK SK E + + +KK + +N+ K K+ + T E+++EKK D K K KE
Sbjct: 414 KKKSKVEGGESEEGKKKKKKDKKKNKKKDTKEPKMT--EDEEEKKDDSKDVKIEGSKAKE 471
Query: 344 EE 339
E+
Sbjct: 472 EK 473
Score = 27.5 bits (58), Expect = 8.8
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = -3
Query: 587 MEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFT-LE 411
M + N++ L K L K EN +++ KA ++K K +E +
Sbjct: 1 MSSNQENAKEEKLHVKIKTQELDPKEKGENVEVEMEVKAKSIE---KVKAKKDEESSGKS 57
Query: 410 EEDKEKKPDWSKGKPGDQKVKEEE 339
++DKEKK KGK D +VKE++
Sbjct: 58 KKDKEKK----KGKNVDSEVKEDK 77
>At5g41780.1 68418.m05087 myosin heavy chain-related weak similarity
to M protein, serotype 5 precursor (SP:P02977)
{Streptococcus pyogenes} and to Myosin heavy chain,
non-muscle (SP:Q99323) (Zipper protein) (Myosin II)
{Drosophila melanogaster}
Length = 537
Score = 31.5 bits (68), Expect = 0.54
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Frame = -3
Query: 644 IARLEDXKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAE 465
I +ED LEY VK ++ I L+ ++ D K LK+ +KF++ QK
Sbjct: 254 IDEIEDKSKKLEYQVKEQEDIIQRLSMEIKD-----QKKLLKEQKDAIDKFSEDQKLMKR 308
Query: 464 FNFRNQL--KVVKKKEFTLEEEDKEKKPD 384
++F ++L +++KK L E+ + K D
Sbjct: 309 WSFGSKLNTNLLEKKMEELAEDFRMKMED 337
>At3g26050.1 68416.m03244 expressed protein
Length = 533
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/71 (25%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = -3
Query: 599 KRKDMEI-SDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKE 423
KRK++ + S ++ ++++ + + +S + AK ++ F FR+ + K+KE
Sbjct: 355 KRKNISVRSSVSCRISNNEQRKPSVGCENLSTHSRTKAKSLTVSSPFVFRSDERAEKRKE 414
Query: 422 FTLEEEDKEKK 390
F + E+K KK
Sbjct: 415 FFKKVEEKNKK 425
>At3g04960.1 68416.m00538 expressed protein low similarity to
SP|P32380 NUF1 protein (Spindle poly body spacer protein
SPC110) {Saccharomyces cerevisiae}
Length = 556
Score = 30.3 bits (65), Expect = 1.3
Identities = 23/79 (29%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Frame = -3
Query: 617 DLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAE--FNFRNQL 444
DLE + +RK+ E+ ++ + D ++ +LK + +++F L+++A E + RNQ+
Sbjct: 6 DLEGLDQRKE-EMRNIFDDIQDKASLILQFSLKW-EEIDDRFGFLKQRAMEKEVSVRNQI 63
Query: 443 KVVKKKEFTLE-EEDKEKK 390
++KKE L E++E+K
Sbjct: 64 LELEKKEERLRLVEERERK 82
>At1g77580.2 68414.m09032 myosin heavy chain-related low similarity
to SP|P08799 Myosin II heavy chain, non muscle
{Dictyostelium discoideum}
Length = 779
Score = 30.3 bits (65), Expect = 1.3
Identities = 22/91 (24%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Frame = -3
Query: 602 VKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNF-RNQLKVVKKK 426
++ K EI VN+L+ + T+ + + K AK++ + R +++K
Sbjct: 568 IETKLGEIQTEMKLVNELKAEVESQTIAMEADAKTKSAKIESLEEDMRKERFAFDELRRK 627
Query: 425 EFTLEEEDKEKKPDWSKGKPGDQKVKEEEVE 333
LEEE K + K + + K+K+E++E
Sbjct: 628 CEALEEEISLHKENSIKSENKEPKIKQEDIE 658
>At1g80070.1 68414.m09373 splicing factor, putative strong similarity
to splicing factor Prp8 [Homo sapiens] GI:3661610;
contains Pfam profile PF01398: Mov34/MPN/PAD-1 family
Length = 2382
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/84 (21%), Positives = 39/84 (46%)
Frame = -3
Query: 617 DLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKV 438
DL Y K+ D+ ++ S ++ + + + + +E++F Q+ AE+ + Q
Sbjct: 1386 DLRYS-KQTDVGVTHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAQ 1444
Query: 437 VKKKEFTLEEEDKEKKPDWSKGKP 366
+ + TLE + + W +G P
Sbjct: 1445 AQNRRLTLE----DLEDSWDRGIP 1464
>At5g66540.1 68418.m08389 expressed protein ; supported by
full-Length cDNA gi:12057175 from [Arabidopsis thaliana]
Length = 524
Score = 29.5 bits (63), Expect = 2.2
Identities = 26/105 (24%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Frame = -3
Query: 638 RLEDXKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFN 459
+L FD E I ++ DM+ L + LR + +K+ +K + KL K A + +
Sbjct: 55 QLSSDGFDAEQIWQQIDMQSQPL---LTSLRQE-----VKRFAKNPEEIRKLGKLALKVS 106
Query: 458 FRNQLKVVKKKEFT---LEEEDKEKKPDWSKGKPGDQKVKEEEVE 333
+ + + F +++EDKE + + S+G+ +++ ++EE E
Sbjct: 107 HEDDIDEMDMDGFDSDDVDDEDKEIESNDSEGEDEEEEEEDEEEE 151
>At5g56030.1 68418.m06991 heat shock protein 81-2 (HSP81-2) nearly
identical to SP|P55737 Heat shock protein 81-2 (HSP81-2)
{Arabidopsis thaliana}
Length = 699
Score = 29.5 bits (63), Expect = 2.2
Identities = 19/58 (32%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Frame = -3
Query: 503 ENKFAKLQKKAAEF-NFRNQLKVVK--KKEFTLEEEDKEKKPDWSKGKPGDQKVKEEE 339
E + L KK +EF ++ L + K +KE + +EE++EKK + K + D++ ++EE
Sbjct: 188 ERRLKDLVKKHSEFISYPISLWIEKTIEKEISDDEEEEEKKDEEGKVEEVDEEKEKEE 245
>At5g56010.1 68418.m06989 heat shock protein, putative strong
similarity to SP|P55737 Heat shock protein 81-2
(HSP81-2) {Arabidopsis thaliana}; contains Pfam profiles
PF02518: ATPase, histidine kinase-, DNA gyrase B-, and
HSP90-like domain protein, PF00183: Hsp90 protein
Length = 699
Score = 29.5 bits (63), Expect = 2.2
Identities = 19/58 (32%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Frame = -3
Query: 503 ENKFAKLQKKAAEF-NFRNQLKVVK--KKEFTLEEEDKEKKPDWSKGKPGDQKVKEEE 339
E + L KK +EF ++ L + K +KE + +EE++EKK + K + D++ ++EE
Sbjct: 188 ERRLKDLVKKHSEFISYPISLWIEKTIEKEISDDEEEEEKKDEEGKVEEVDEEKEKEE 245
>At4g19550.1 68417.m02875 expressed protein
Length = 212
Score = 29.5 bits (63), Expect = 2.2
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 7/69 (10%)
Frame = -3
Query: 524 LKKVSKYEN--KFAKLQKKAA-----EFNFRNQLKVVKKKEFTLEEEDKEKKPDWSKGKP 366
L K+ EN K AKL K E++ +N + + K +++ EEE++ ++PDW++
Sbjct: 119 LDKLFDPENSPKRAKLDKPVVVGDQIEYSKQNSEESLLKSQYSEEEEEEAEEPDWNEDYS 178
Query: 365 GDQKVKEEE 339
+ + E
Sbjct: 179 NEDAYRGNE 187
>At3g05830.1 68416.m00654 expressed protein
Length = 336
Score = 29.5 bits (63), Expect = 2.2
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Frame = -3
Query: 623 KFD-LEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQ 447
KF+ + +V+ KD EI+ L ++ + G++ K + E++ K ++ +
Sbjct: 208 KFERMNRLVEVKDEEITKLKDEIRLMSGQWKH----KTKELESQLEKQRRTDQDLK---- 259
Query: 446 LKVVKKKEFTLEEEDKEKKPDWSKGKPGDQKVKE 345
K V K EF L+E + + KG+ D ++KE
Sbjct: 260 -KKVLKLEFCLQEARSQTRKLQRKGERRDMEIKE 292
>At3g05110.1 68416.m00555 hypothetical protein
Length = 372
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/76 (22%), Positives = 37/76 (48%)
Frame = -3
Query: 617 DLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKV 438
DLE I K E S+ + ++ +LK++ EN+ +++ K F+ + +
Sbjct: 35 DLEQIQKEDSSEEICTESERMRKETELIETSLKQLEARENELREVEAKRKFFDLKEKELE 94
Query: 437 VKKKEFTLEEEDKEKK 390
K+KE L++ +++
Sbjct: 95 EKEKELELKQRQVQER 110
>At1g79280.1 68414.m09242 expressed protein weak similarity to
Nucleoprotein TPR (Swiss-Prot:P12270) [Homo sapiens]
Length = 2111
Score = 29.5 bits (63), Expect = 2.2
Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 3/90 (3%)
Frame = -3
Query: 644 IARLEDXKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPT---LKKVSKYENKFAKLQKK 474
++ L K L ++++KD EIS+ NS + K VK T +K ++ A+L +
Sbjct: 117 MSELHKSKRQLMELLEQKDAEISEKNSTIKSYLDKIVKLTDTSSEKEARLAEATAELARS 176
Query: 473 AAEFNFRNQLKVVKKKEFTLEEEDKEKKPD 384
A + +Q K + ++ +E+ K D
Sbjct: 177 QAMCSRLSQEKELTERHAKWLDEELTAKVD 206
>At1g18890.1 68414.m02351 calcium-dependent protein kinase 1 (CDPK1)
identical to calcium-dependent protein kinase
[Arabidopsis thaliana] gi|604880|dbj|BAA04829; contains
protein kinase domain, Pfam:PF00069; contains EF hand
domain (calcium-binding EF-hand), Pfam:PF00036,
INTERPRO:IPR002048
Length = 545
Score = 29.5 bits (63), Expect = 2.2
Identities = 20/65 (30%), Positives = 34/65 (52%)
Frame = -3
Query: 545 GKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWSKGKP 366
G V+ LK+ S K+ + AE +++V+K F+L ++DK+ K + + K
Sbjct: 333 GDIVRSRLKQFSMMNRFKKKVLRVIAEHLSIQEVEVIKNM-FSLMDDDKDGKITYPELKA 391
Query: 365 GDQKV 351
G QKV
Sbjct: 392 GLQKV 396
>At5g63640.1 68418.m07990 VHS domain-containing protein / GAT
domain-containing protein weak similarity to hepatocyte
growth factor-regulated tyrosine kinase substrate HRS
isoform 2 [Homo sapiens] GI:9022389; contains Pfam
profiles PF00790: VHS domain, PF03127: GAT domain
Length = 447
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = -3
Query: 524 LKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPD--WSKGKPGDQKV 351
L+ V N K + KA+ N + + + LEEED+E++P+ + + + G +
Sbjct: 285 LEPVRPISNGDQKRELKASNANTESSSFISNRAHLKLEEEDEEEEPEQLFRRLRKGKARA 344
Query: 350 KEEEVE 333
+ E+ E
Sbjct: 345 RPEDEE 350
>At5g61150.2 68418.m07672 leo1-like family protein weak similarity
to SP|P38439 LEO1 protein {Saccharomyces cerevisiae};
contains Pfam profile PF04004: Leo1-like protein;
supporting cDNA gi|21929714|gb|AF490422.1|
Length = 623
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = -3
Query: 434 KKKEFTLEEEDKEKKPDWSKGKPGDQKVKEEEVE 333
++ E+ EEE++EK P +GK + + +E+ E
Sbjct: 525 EESEYETEEEEEEKSPARGRGKDSEDEYEEDAEE 558
>At5g61150.1 68418.m07671 leo1-like family protein weak similarity
to SP|P38439 LEO1 protein {Saccharomyces cerevisiae};
contains Pfam profile PF04004: Leo1-like protein;
supporting cDNA gi|21929714|gb|AF490422.1|
Length = 625
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = -3
Query: 434 KKKEFTLEEEDKEKKPDWSKGKPGDQKVKEEEVE 333
++ E+ EEE++EK P +GK + + +E+ E
Sbjct: 525 EESEYETEEEEEEKSPARGRGKDSEDEYEEDAEE 558
>At5g60530.1 68418.m07590 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 439
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/68 (26%), Positives = 34/68 (50%)
Frame = -3
Query: 533 KPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWSKGKPGDQK 354
K +K +K + + K K+ E + + + KK + E++DKE+K K K K
Sbjct: 65 KKDKEKAAKDKKEKEKKDKEEKEKKDKERKEKEKKDKLEKEKKDKERKEKERKEKERKAK 124
Query: 353 VKEEEVEA 330
K+++ E+
Sbjct: 125 EKKDKEES 132
>At5g57830.1 68418.m07232 expressed protein contains Pfam profile
PF04576: Protein of unknown function, DUF593
Length = 387
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/61 (29%), Positives = 31/61 (50%)
Frame = -3
Query: 611 EYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVK 432
E ++ +K+MEI+ L QV R K + + ENKF + + E + NQ + +K
Sbjct: 91 EDLIYQKEMEIASLEFQVQAYRCKLLSLGCSDPAVIENKFPETLIFSGENSRGNQKRKMK 150
Query: 431 K 429
+
Sbjct: 151 R 151
>At5g56000.1 68418.m06988 heat shock protein 81-4 (HSP81-4) nearly
identical to heat shock protein hsp81.4 [Arabidopsis
thaliana] GI:1906828; contains Pfam profiles PF02518:
ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like
domain protein, PF00183: Hsp90 protein
Length = 699
Score = 29.1 bits (62), Expect = 2.9
Identities = 19/58 (32%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Frame = -3
Query: 503 ENKFAKLQKKAAEF-NFRNQLKVVK--KKEFTLEEEDKEKKPDWSKGKPGDQKVKEEE 339
E + L KK +EF ++ L + K +KE + +EE++EKK + K + D++ ++EE
Sbjct: 188 ERRLKDLVKKHSEFISYPISLWIEKTIEKEISDDEEEEEKKDEEGKVEEIDEEKEKEE 245
>At5g19310.1 68418.m02301 homeotic gene regulator, putative similar to
SP|P25439 Homeotic gene regulator (Brahma protein)
{Drosophila melanogaster}; contains Pfam profiles
PF00271: Helicase conserved C-terminal domain, PF00176:
SNF2 family N-terminal domain
Length = 1064
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = -3
Query: 524 LKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWSKGKPGDQKVKE 345
+K + + +K+ +K + + ++ K E L E D+EK+ + + K K E
Sbjct: 964 MKAMESEDEDASKVSQKRKRTDTKTRMSNGSKAEAVLSESDEEKEEEEEERKEESGKESE 1023
Query: 344 EEVE 333
EE E
Sbjct: 1024 EENE 1027
>At4g38780.1 68417.m05491 splicing factor, putative strong similarity
to splicing factor Prp8 [Homo sapiens] GI:3661610;
contains Pfam profile PF01398: Mov34/MPN/PAD-1 family
Length = 2332
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/84 (21%), Positives = 38/84 (45%)
Frame = -3
Query: 617 DLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKV 438
DL Y + D+ +S S ++ + + + + +E++F Q+ AE+ + Q
Sbjct: 1338 DLRYS-NQTDVGVSHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAQ 1396
Query: 437 VKKKEFTLEEEDKEKKPDWSKGKP 366
+ + TLE + + W +G P
Sbjct: 1397 AQNRRLTLE----DLEDSWDRGIP 1416
>At5g62190.1 68418.m07807 DEAD box RNA helicase (PRH75) nearly
identical to RNA helicase [Arabidopsis thaliana]
GI:1488521; contains Pfam profiles PF00270: DEAD/DEAH
box helicase, PF00271: Helicase conserved C-terminal
domain
Length = 671
Score = 28.7 bits (61), Expect = 3.8
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Frame = -3
Query: 530 PTLKKVSKYENKFAKLQKKAA----EFNFRNQLKVVKKKEFTLEEEDKEKKPDWSKGKPG 363
P+L K E K K++KK A E + + K K K +EE+ EKK K K
Sbjct: 2 PSLMLSDKKEEK--KMKKKMALDTPELDSKKGKKEQKLKLSDSDEEESEKKKSKKKDKKR 59
Query: 362 DQKVKEEEVEA*TS 321
+E+EV++ +S
Sbjct: 60 KASEEEDEVKSDSS 73
Score = 28.3 bits (60), Expect = 5.0
Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = -3
Query: 518 KVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWSKGKPGDQKVK--E 345
K K E K KL E + + + K KK EEED+ K S+ K +KVK
Sbjct: 29 KKGKKEQKL-KLSDSDEEESEKKKSKKKDKKRKASEEEDEVKSDSSSEKKKSSKKVKLGV 87
Query: 344 EEVE 333
E+VE
Sbjct: 88 EDVE 91
>At5g48610.1 68418.m06012 expressed protein ; expression supported
by MPSS
Length = 470
Score = 28.7 bits (61), Expect = 3.8
Identities = 19/59 (32%), Positives = 33/59 (55%)
Frame = -3
Query: 521 KKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWSKGKPGDQKVKE 345
KK K + K +KK+ + + Q + +KK+ +++DKEK + KGKP ++K E
Sbjct: 18 KKHKKDKEKREGKEKKSKDRSKDKQKERKEKKDKHKDQKDKEKGKE--KGKPLEEKKAE 74
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = -3
Query: 464 FNFRNQLKVVKKKEFTLEEEDKEKK-PDWSKGKPGDQKVKEEE 339
F F+++ K K K+ + E KEKK D SK K ++K K+++
Sbjct: 9 FEFQDKYKEKKHKKDKEKREGKEKKSKDRSKDKQKERKEKKDK 51
>At5g52550.1 68418.m06525 expressed protein
Length = 360
Score = 28.3 bits (60), Expect = 5.0
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = -3
Query: 560 VNDLRGKFVKPTLKKVSKYENKFAKLQKK-AAEFNFRNQLKVVK--KKEFTLEEEDKEKK 390
V R K VK + + + E K +L+K A R +L+ K KKE LE D+E
Sbjct: 15 VRKARKKKVKGVVDPIKQAEKKNRRLEKAIATSAAIRAELEKKKQMKKEGQLEAADEEDS 74
Query: 389 PDWSKGK 369
D +K K
Sbjct: 75 ADAAKKK 81
>At2g18540.1 68415.m02160 cupin family protein contains Pfam profile
PF00190: Cupin
Length = 707
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/64 (21%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = -3
Query: 521 KKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLE-EEDKEKKPDWSKGKPGDQKVKE 345
++ K E + AK++++ + R ++ +++E + EE+++++ + +K +++ KE
Sbjct: 630 EEARKREEEMAKIREEERQRKEREDVERKRREEEAMRREEERKREEEAAKRAEEERRKKE 689
Query: 344 EEVE 333
EE E
Sbjct: 690 EEEE 693
>At1g27720.1 68414.m03388 transcription initiation factor IID
(TFIID) component TAF4 family protein contains Pfam
profile PF05236: Transcription initiation factor TFIID
component TAF4 family
Length = 682
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = -3
Query: 485 LQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWSKGKPGDQKVKEEEVE 333
LQ+ AE RN+ + + E +++ K +W K G++K KE + E
Sbjct: 520 LQRTDAE-KCRNRTFITSDIRKEINEMNQKVKEEWEKKHSGEEKNKENDTE 569
>At5g54410.1 68418.m06777 hypothetical protein
Length = 219
Score = 27.9 bits (59), Expect = 6.7
Identities = 17/60 (28%), Positives = 29/60 (48%)
Frame = -3
Query: 512 SKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWSKGKPGDQKVKEEEVE 333
+K ENK K Q + + +KK+ EEE+K+ + K +P ++K K+ E
Sbjct: 92 TKVENKLKKTQPEKDRAEEEEKDLTEEKKKDPTEEEEKDPTEE-KKKEPAEEKKKDPTEE 150
>At5g24880.1 68418.m02946 expressed protein ; expression supported
by MPSS
Length = 443
Score = 27.9 bits (59), Expect = 6.7
Identities = 36/129 (27%), Positives = 57/129 (44%), Gaps = 19/129 (14%)
Frame = -3
Query: 668 VCKDYHXRIARLEDXKFDLEYIVKRKDMEISDL-NSQVN------DLRGKF--------V 534
V KD + +A LE+ E ++ K E+ + N+Q N D++ K V
Sbjct: 259 VGKDCNAVVAELEEKLIKNEDDIEEKTEEMKEQDNNQANKSEEEEDVKKKIDENETPEKV 318
Query: 533 KPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWSKGK-PGD- 360
K+V E + +++ E + K+KE E++ KEK + K K GD
Sbjct: 319 DTESKEVESVEETTQEKEEEVKEEGKERVEEEEKEKEKVKEDDQKEKVEEEEKEKVKGDE 378
Query: 359 --QKVKEEE 339
+KVKEEE
Sbjct: 379 EKEKVKEEE 387
>At2g34730.1 68415.m04265 myosin heavy chain-related low similarity
to SP|P14105 Myosin heavy chain, nonmuscle (Cellular
myosin heavy chain) {Gallus gallus}
Length = 825
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = -3
Query: 602 VKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAE 465
+K ++SDL+ Q+N+++GK T K+ + E K L+K AE
Sbjct: 729 LKNMQSQLSDLSHQINEVKGK--ASTYKQ--RLEKKCCDLKKAEAE 770
>At1g60200.1 68414.m06781 splicing factor PWI domain-containing
protein / RNA recognition motif (RRM)-containing protein
contains Pfam profiles PF01480: PWI domain, PF00076: RNA
recognition motif. (a.k.a. RRM, RBD, or RNP domain)
Length = 899
Score = 27.9 bits (59), Expect = 6.7
Identities = 20/61 (32%), Positives = 29/61 (47%)
Frame = -3
Query: 527 TLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWSKGKPGDQKVK 348
T + + KY K + KKA E +Q + E E+DK + D GK G+ K+K
Sbjct: 282 TKEYLLKYVEKKIETAKKAKE----SQGTKENQAEGPESEQDKLESADNETGKDGESKIK 337
Query: 347 E 345
E
Sbjct: 338 E 338
>At1g28450.1 68414.m03497 MADS-box family protein similar to
MADS-box protein GI:2160701 from [Pinus radiata]
Length = 185
Score = 27.9 bits (59), Expect = 6.7
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Frame = -3
Query: 527 TLKKVSKYENKFAKLQKKAAEFN-FRNQLKV--VK-KKEFTLEEEDKEKKPDWSKGKPGD 360
+L++ K +K AK+Q+ +N +LKV VK KK L E K W K P D
Sbjct: 87 SLQRSVKNAHKQAKIQELCKRYNRLVEELKVDEVKVKKAAALAETRAVNKDAWWKADPND 146
Query: 359 QKVKEE 342
K E+
Sbjct: 147 VKDHEK 152
>At5g66030.2 68418.m08315 Golgi-localized GRIP domain-containing
protein contains Pfam profile PF01465: GRIP domain;
supporting cDNA gi|20303028|gb|AF499634.1|
Length = 765
Score = 27.5 bits (58), Expect = 8.8
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = -3
Query: 605 IVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENK-FAKLQKKAAEFNFRNQLKVVKK 429
I+ KD E+ ++N L+ +F S Y+ + A LQKK E + +K
Sbjct: 409 ILSTKDAELKGAREEINRLQSEF--------SSYKIRAHALLQKKDMELAAAKDSEQIKS 460
Query: 428 KEFTLEEEDKE 396
E L+E +KE
Sbjct: 461 LEEALKEAEKE 471
>At5g66030.1 68418.m08314 Golgi-localized GRIP domain-containing
protein contains Pfam profile PF01465: GRIP domain;
supporting cDNA gi|20303028|gb|AF499634.1|
Length = 788
Score = 27.5 bits (58), Expect = 8.8
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = -3
Query: 605 IVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENK-FAKLQKKAAEFNFRNQLKVVKK 429
I+ KD E+ ++N L+ +F S Y+ + A LQKK E + +K
Sbjct: 409 ILSTKDAELKGAREEINRLQSEF--------SSYKIRAHALLQKKDMELAAAKDSEQIKS 460
Query: 428 KEFTLEEEDKE 396
E L+E +KE
Sbjct: 461 LEEALKEAEKE 471
>At4g26630.1 68417.m03837 expressed protein
Length = 763
Score = 27.5 bits (58), Expect = 8.8
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = -3
Query: 512 SKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWSKGKPGDQKVKEEEVE 333
S + AK QKK+ E KVVKK ++E +E+K + K + + KEE+ E
Sbjct: 492 SSSSKRSAKSQKKSEEAT-----KVVKKSLAHSDDESEEEKEEEEKQEEEKAEEKEEKKE 546
>At4g15730.1 68417.m02394 expressed protein
Length = 1059
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -3
Query: 449 QLKVVKKKEFTLEEEDKEKKPDWSKGKPGDQKVKEEEV 336
Q+KV KKKE EE D K G + +K EE+
Sbjct: 585 QIKVKKKKEADKEESDGSKHIKTGDGNKLARVIKAEEI 622
>At2g41170.1 68415.m05085 F-box family protein contains Pfam
PF00646: F-box domain; similar to SKP1 interacting
partner 2 (SKIP2) TIGR_Ath1:At5g67250
Length = 371
Score = 27.5 bits (58), Expect = 8.8
Identities = 17/74 (22%), Positives = 34/74 (45%)
Frame = -3
Query: 599 KRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEF 420
K E+ + S ++LR K V L + E K+ +L AA +++ + + +
Sbjct: 73 KLSPSELCAMTSVCSELRDKCVSDHLWE-KHMETKWGRLMGDAAIQEWKSHVATIMRCLT 131
Query: 419 TLEEEDKEKKPDWS 378
+ ++ KP+WS
Sbjct: 132 SSSSSSRKSKPNWS 145
>At2g31410.1 68415.m03838 expressed protein
Length = 199
Score = 27.5 bits (58), Expect = 8.8
Identities = 20/73 (27%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = -2
Query: 606 HR*KERY-GDLRPELPSQRPQRQIRQAHTKEGFQIRKQIRQAPEEGRRIQLP*PIEGREK 430
HR R+ + +P+L + QR+I++A+ + +++++IR E R+ + E R+K
Sbjct: 92 HRSSGRFVKNRKPDLEEMKRQREIKKAYKERVNELKEEIRSNKVEKRKKKE--EREKRKK 149
Query: 429 EGIHLGRGRQREK 391
E + L G + +K
Sbjct: 150 ENV-LRTGTKLQK 161
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,842,689
Number of Sequences: 28952
Number of extensions: 242671
Number of successful extensions: 930
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 785
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 903
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1457719448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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