Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_P18
(503 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9UNL2 Cluster: Translocon-associated protein subunit g... 180 1e-44
UniRef50_Q95XS1 Cluster: Putative uncharacterized protein; n=2; ... 115 7e-25
UniRef50_Q5D974 Cluster: SJCHGC01752 protein; n=2; Schistosoma j... 102 5e-21
UniRef50_Q29330 Cluster: Translocon associated protein gamma cha... 84 2e-15
UniRef50_Q55GT5 Cluster: Putative uncharacterized protein; n=1; ... 62 9e-09
UniRef50_A6H8S0 Cluster: Zgc:165461 protein; n=5; Danio rerio|Re... 33 4.8
UniRef50_Q4Q514 Cluster: Putative uncharacterized protein; n=3; ... 33 4.8
UniRef50_Q4FL97 Cluster: Iron(III) ABC transporter; n=3; Bacteri... 32 8.5
UniRef50_Q47DD9 Cluster: Putative uncharacterized protein; n=1; ... 32 8.5
UniRef50_Q1Q1Y4 Cluster: Putative uncharacterized protein; n=1; ... 32 8.5
UniRef50_O75445 Cluster: Usherin precursor; n=34; Eukaryota|Rep:... 32 8.5
>UniRef50_Q9UNL2 Cluster: Translocon-associated protein subunit
gamma; n=36; Eumetazoa|Rep: Translocon-associated
protein subunit gamma - Homo sapiens (Human)
Length = 185
Score = 180 bits (439), Expect = 1e-44
Identities = 84/140 (60%), Positives = 109/140 (77%), Gaps = 2/140 (1%)
Frame = -1
Query: 503 SALFYGXAFIVSAIPIWLFWRVHSLEISTAIIWFILVTAASTWLLALAYRNTKFQLKHXX 324
SALF+G AFIVSAIPIWL+WR+ +++ + + + ++T ST+L+A AY+N KF LKH
Sbjct: 29 SALFFGNAFIVSAIPIWLYWRIWHMDLIQSAVLYSVMTLVSTYLVAFAYKNVKFVLKHKV 88
Query: 323 XXXXXXXXXXEMSRKL--ADDKKMSRKEKDERILWKKNEVADYEATTYSIFYNNALFLTI 150
E++RKL AD++KMSRKEKDERILWKKNEVADYEATT+SIFYNN LFL +
Sbjct: 89 AQKREDAVSKEVTRKLSEADNRKMSRKEKDERILWKKNEVADYEATTFSIFYNNTLFLVV 148
Query: 149 VILSSFYILRTFTPTVNYIV 90
VI++SF+IL+ F PTVNYI+
Sbjct: 149 VIVASFFILKNFNPTVNYIL 168
>UniRef50_Q95XS1 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 178
Score = 115 bits (276), Expect = 7e-25
Identities = 56/135 (41%), Positives = 87/135 (64%)
Frame = -1
Query: 494 FYGXAFIVSAIPIWLFWRVHSLEISTAIIWFILVTAASTWLLALAYRNTKFQLKHXXXXX 315
FY A I+S P++LF+ VH +EI +++ + L + +LL+LA +N K LKH
Sbjct: 27 FYLNALIISIAPLYLFYGVHQMEIQDSLVVWGLSAVGTAYLLSLACKNQKCLLKHQIVMK 86
Query: 314 XXXXXXXEMSRKLADDKKMSRKEKDERILWKKNEVADYEATTYSIFYNNALFLTIVILSS 135
E+S + A DKKM+ KEK+ER L++KNEVAD E+T S+FY N+L+LTI+++S+
Sbjct: 87 RGSAVEREISGQYAADKKMTVKEKEERALFRKNEVADTESTYLSVFYTNSLYLTIMLVSA 146
Query: 134 FYILRTFTPTVNYIV 90
F++L P N ++
Sbjct: 147 FFLLANVAPVFNLLI 161
>UniRef50_Q5D974 Cluster: SJCHGC01752 protein; n=2; Schistosoma
japonicum|Rep: SJCHGC01752 protein - Schistosoma
japonicum (Blood fluke)
Length = 173
Score = 102 bits (244), Expect = 5e-21
Identities = 47/121 (38%), Positives = 78/121 (64%)
Frame = -1
Query: 497 LFYGXAFIVSAIPIWLFWRVHSLEISTAIIWFILVTAASTWLLALAYRNTKFQLKHXXXX 318
L Y A ++S+IPIWLF+ VH + + + F +++ AST+L++LAY+N+K L
Sbjct: 27 LVYVNAIMISSIPIWLFFGVHKMPLVANSVLFAIISLASTFLMSLAYKNSKAPLMERIAI 86
Query: 317 XXXXXXXXEMSRKLADDKKMSRKEKDERILWKKNEVADYEATTYSIFYNNALFLTIVILS 138
E++ + DKK+S+K +++ + + +VADYE+TT+SIFYNN LFL +++L
Sbjct: 87 RRTEAITKEVNSEACKDKKLSKKNREDIVRERTKKVADYESTTFSIFYNNCLFLLLLLLL 146
Query: 137 S 135
S
Sbjct: 147 S 147
>UniRef50_Q29330 Cluster: Translocon associated protein gamma chain;
n=2; Laurasiatheria|Rep: Translocon associated protein
gamma chain - Sus scrofa (Pig)
Length = 77
Score = 83.8 bits (198), Expect = 2e-15
Identities = 43/78 (55%), Positives = 56/78 (71%), Gaps = 2/78 (2%)
Frame = -1
Query: 425 ISTAIIWFILVTAASTWLLALAYRNTKFQLKHXXXXXXXXXXXXEMSRKL--ADDKKMSR 252
I +A+++ ++ T ST+L+A AY+N KF LKH E++RKL AD++KMSR
Sbjct: 1 IQSAVLYSVM-TLVSTYLVAXAYKNVKFVLKHKVAQKREDAVSKEVTRKLSEADNRKMSR 59
Query: 251 KEKDERILWKKNEVADYE 198
KEKDERILWKKNEVADYE
Sbjct: 60 KEKDERILWKKNEVADYE 77
>UniRef50_Q55GT5 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 170
Score = 61.7 bits (143), Expect = 9e-09
Identities = 37/136 (27%), Positives = 65/136 (47%)
Frame = -1
Query: 497 LFYGXAFIVSAIPIWLFWRVHSLEISTAIIWFILVTAASTWLLALAYRNTKFQLKHXXXX 318
+++ + IV+ +P++L+ + + I +I + VT + +L AY N +++K
Sbjct: 23 VYFINSLIVALVPVYLYHAIFFMSIDDHMIIYGSVTLFAAIVLTFAYNNI-YRMKRLKLS 81
Query: 317 XXXXXXXXEMSRKLADDKKMSRKEKDERILWKKNEVADYEATTYSIFYNNALFLTIVILS 138
K+ D KK + +K+ + L V +EA SI YNNA+FL V +
Sbjct: 82 ASREHISIASKNKVGDKKKFAAAQKEVQAL-----VTSHEAIAASIMYNNAVFLICVSIF 136
Query: 137 SFYILRTFTPTVNYIV 90
SF I + NYI+
Sbjct: 137 SFIIFKNVPLVYNYII 152
>UniRef50_A6H8S0 Cluster: Zgc:165461 protein; n=5; Danio rerio|Rep:
Zgc:165461 protein - Danio rerio (Zebrafish)
(Brachydanio rerio)
Length = 232
Score = 32.7 bits (71), Expect = 4.8
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +3
Query: 270 ISKFPGHFTGNSILPAHSNTVLQLELSVTVGKSQQPGASCRYQDKPNNCGAY 425
+S GH L +N VLQ+ SV +P +C++ KP C AY
Sbjct: 50 LSTKDGHRCTWETLERGANIVLQVSCSVAGEDGLKPPYTCQFAGKPQECSAY 101
>UniRef50_Q4Q514 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 1003
Score = 32.7 bits (71), Expect = 4.8
Identities = 21/47 (44%), Positives = 24/47 (51%)
Frame = +3
Query: 285 GHFTGNSILPAHSNTVLQLELSVTVGKSQQPGASCRYQDKPNNCGAY 425
G TG+S PA VLQL LS T G QP A+C D N +Y
Sbjct: 238 GGLTGDSPAPA----VLQLNLSKTHGPPSQPAAACATGDDGNGGVSY 280
>UniRef50_Q4FL97 Cluster: Iron(III) ABC transporter; n=3;
Bacteria|Rep: Iron(III) ABC transporter - Pelagibacter
ubique
Length = 538
Score = 31.9 bits (69), Expect = 8.5
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = +3
Query: 195 SFIICHLILFPQDSFVLFFSAHFFIISKFPGHFTGNSILPAHSNTVLQLELS 350
+F+ C L+ F F +F ++ II FP HF +++ SNT+L + LS
Sbjct: 289 AFLFCTLVFFLSFLFPVFQMLYWTII--FPKHFLDLNLIELFSNTMLLVFLS 338
>UniRef50_Q47DD9 Cluster: Putative uncharacterized protein; n=1;
Dechloromonas aromatica RCB|Rep: Putative
uncharacterized protein - Dechloromonas aromatica
(strain RCB)
Length = 505
Score = 31.9 bits (69), Expect = 8.5
Identities = 21/46 (45%), Positives = 23/46 (50%), Gaps = 5/46 (10%)
Frame = -1
Query: 491 YGXAFIVSAIPIWLFWRVHS--LEIS-TAIIWFILVTAAST--WLL 369
Y AFIV I +WL WR L I TA W L A +T WLL
Sbjct: 46 YAHAFIVPPIALWLIWRKRDELLAIQPTASGWLALPLAVATFAWLL 91
>UniRef50_Q1Q1Y4 Cluster: Putative uncharacterized protein; n=1;
Candidatus Kuenenia stuttgartiensis|Rep: Putative
uncharacterized protein - Candidatus Kuenenia
stuttgartiensis
Length = 1084
Score = 31.9 bits (69), Expect = 8.5
Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -1
Query: 278 LADDKKMSRKEKDERILWKKNEV-ADYEATTYSIFYNNALFL 156
LA K EKDE WK ++ ADY T+ FY+NAL L
Sbjct: 594 LAQYKTPFAIEKDETSSWKSSDKGADYIIITHEDFYDNALAL 635
>UniRef50_O75445 Cluster: Usherin precursor; n=34; Eukaryota|Rep:
Usherin precursor - Homo sapiens (Human)
Length = 5202
Score = 31.9 bits (69), Expect = 8.5
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = -1
Query: 236 RILWKKNEVADYEATTYSIFYNNALFLTIVILSSFYILRTFTPTVNY 96
R++W + T YSI+ NN L+ T + + +ILR +P Y
Sbjct: 3037 RVIWTSPSNPNGVVTEYSIYVNNKLYKTGMNVPGSFILRDLSPFTIY 3083
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 482,388,924
Number of Sequences: 1657284
Number of extensions: 9031886
Number of successful extensions: 24453
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 23632
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24439
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30110042232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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