Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_P18
         (503 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC025715-7|AAK68443.1|  178|Caenorhabditis elegans Hypothetical ...   114   4e-26
AF016445-1|AAC69057.2|  367|Caenorhabditis elegans Serpentine re...    30   0.83 
Z81571-5|CAB04615.1|  419|Caenorhabditis elegans Hypothetical pr...    30   1.1  
Z81571-3|CAB04613.1|  352|Caenorhabditis elegans Hypothetical pr...    29   1.4  
AF039049-7|AAB94243.2|  300|Caenorhabditis elegans Serpentine re...    29   1.4  
AC024817-54|AAF59564.1|  229|Caenorhabditis elegans Hypothetical...    29   2.5  
AL032623-17|CAN86638.1| 1398|Caenorhabditis elegans Hypothetical...    28   3.3  
AL032623-16|CAA21511.2| 1816|Caenorhabditis elegans Hypothetical...    28   3.3  
U00032-9|AAA50631.1|  229|Caenorhabditis elegans Hypothetical pr...    28   4.4  
Z73970-2|CAA98243.2| 1560|Caenorhabditis elegans Hypothetical pr...    27   5.8  

>AC025715-7|AAK68443.1|  178|Caenorhabditis elegans Hypothetical
           protein Y38F2AR.2 protein.
          Length = 178

 Score =  114 bits (274), Expect = 4e-26
 Identities = 56/135 (41%), Positives = 87/135 (64%)
 Frame = -1

Query: 494 FYGXAFIVSAIPIWLFWRVHSLEISTAIIWFILVTAASTWLLALAYRNTKFQLKHXXXXX 315
           FY  A I+S  P++LF+ VH +EI  +++ + L    + +LL+LA +N K  LKH     
Sbjct: 27  FYLNALIISIAPLYLFYGVHQMEIQDSLVVWGLSAVGTAYLLSLACKNQKCLLKHQIVMK 86

Query: 314 XXXXXXXEMSRKLADDKKMSRKEKDERILWKKNEVADYEATTYSIFYNNALFLTIVILSS 135
                  E+S + A DKKM+ KEK+ER L++KNEVAD E+T  S+FY N+L+LTI+++S+
Sbjct: 87  RGSAVEREISGQYAADKKMTVKEKEERALFRKNEVADTESTYLSVFYTNSLYLTIMLVSA 146

Query: 134 FYILRTFTPTVNYIV 90
           F++L    P  N ++
Sbjct: 147 FFLLANVAPVFNLLI 161


>AF016445-1|AAC69057.2|  367|Caenorhabditis elegans Serpentine
           receptor, class w protein132 protein.
          Length = 367

 Score = 30.3 bits (65), Expect = 0.83
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = -1

Query: 266 KKMSRKEKDERILWKKNEVADYEATTYSIFYNNALF 159
           K++ + EK  ++    N+  DY  TT  +FYN   F
Sbjct: 246 KEIRKAEKRRKVSTSFNKTKDYRRTTQLVFYNTIFF 281


>Z81571-5|CAB04615.1|  419|Caenorhabditis elegans Hypothetical
           protein M01G12.6 protein.
          Length = 419

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 25/115 (21%), Positives = 44/115 (38%), Gaps = 2/115 (1%)
 Frame = -1

Query: 497 LFYGXAFIVSAIPIWLFWRVHSLEISTAIIWFILVTAASTWLLALAYRNTKFQLKHXXXX 318
           LF   +FI++ I          L +  +I+    +    TW + ++Y N   +L      
Sbjct: 227 LFQLLSFILALITYHPNLETSPLNLYRSILNLYYMPFIWTWAVTISYSNRVQKLLEEYKN 286

Query: 317 XXXXXXXXEMSRKLAD--DKKMSRKEKDERILWKKNEVADYEATTYSIFYNNALF 159
                    +    A    K+M +  +++R L    +  DY  TT  +FYN   F
Sbjct: 287 GLEIIIPCLLFPIFAGLLVKEMHKATENQRRLTSSKKTIDYNKTTRLVFYNTLFF 341


>Z81571-3|CAB04613.1|  352|Caenorhabditis elegans Hypothetical
           protein M01G12.4 protein.
          Length = 352

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = -1

Query: 266 KKMSRKEKDERILWKKNEVADYEATTYSIFYNNALF 159
           K+M +  +++R L    +  DY  TT  +FYN   F
Sbjct: 239 KEMHKATENQRRLTSSKKTIDYNKTTRLVFYNTLFF 274


>AF039049-7|AAB94243.2|  300|Caenorhabditis elegans Serpentine
           receptor, class x protein63 protein.
          Length = 300

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
 Frame = +3

Query: 153 SQEKCIIVEN*V-----CGSFI--ICHLILFPQDSFVLFFSAHFFIISKFPGHFTGNSIL 311
           SQ KC+I+ + +      G F   ICH     Q  F+ F ++   +I  + G F  NS++
Sbjct: 118 SQTKCLILVSWMYSLTYAGLFYLRICHFRFDEQVQFLTFSNSRICMIVGWNGDFIKNSVI 177

Query: 312 PAHSNTVLQLELSVTVGKSQQ 374
            A    ++ L  +VT+ KS+Q
Sbjct: 178 VA----IIMLLDTVTIMKSRQ 194


>AC024817-54|AAF59564.1|  229|Caenorhabditis elegans Hypothetical
           protein Y54G2A.27 protein.
          Length = 229

 Score = 28.7 bits (61), Expect = 2.5
 Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
 Frame = -3

Query: 180 FLQ*CTFPDYCHLEQFLH---SAYIHTYS*LHCVSHGCIWTSCSTLHRNQ 40
           +LQ    P  C L   +H   S+YI+ YS LH +SH    T+ +T   N+
Sbjct: 63  YLQMLFRPSVCPLHPSIHLSSSSYIYIYSQLHMLSHNGGPTTTTTTTPNR 112


>AL032623-17|CAN86638.1| 1398|Caenorhabditis elegans Hypothetical
           protein Y43F8B.3b protein.
          Length = 1398

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
 Frame = +2

Query: 311 PCAQQHGASTGT*CY-GRQEPATRC*LPLPG*TK*LRCLFPMNV 439
           PCA   G  TG+ C+ G Q   T C  P P      RC  P+NV
Sbjct: 336 PCAPGQGCGTGSYCHVGAQTQTTVC-CPKPAAVD--RCQQPLNV 376


>AL032623-16|CAA21511.2| 1816|Caenorhabditis elegans Hypothetical
           protein Y43F8B.3a protein.
          Length = 1816

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
 Frame = +2

Query: 311 PCAQQHGASTGT*CY-GRQEPATRC*LPLPG*TK*LRCLFPMNV 439
           PCA   G  TG+ C+ G Q   T C  P P      RC  P+NV
Sbjct: 336 PCAPGQGCGTGSYCHVGAQTQTTVC-CPKPAAVD--RCQQPLNV 376


>U00032-9|AAA50631.1|  229|Caenorhabditis elegans Hypothetical
           protein F37A4.3 protein.
          Length = 229

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 10/38 (26%), Positives = 24/38 (63%)
 Frame = -1

Query: 263 KMSRKEKDERILWKKNEVADYEATTYSIFYNNALFLTI 150
           ++ +  +++++ W     A+YEA  +  ++N +LFLT+
Sbjct: 15  RVGKLMRNDKLAWS----AEYEAKKFKFYHNTSLFLTL 48


>Z73970-2|CAA98243.2| 1560|Caenorhabditis elegans Hypothetical
           protein C29A12.4 protein.
          Length = 1560

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -3

Query: 465 NSNLVVLEGTFIGNKHRNYLVYPGN 391
           ++NL++ +  FIGN   N LVYP +
Sbjct: 581 SANLIIDDPIFIGNVPNNSLVYPSS 605


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,375,793
Number of Sequences: 27780
Number of extensions: 231145
Number of successful extensions: 713
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 683
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 712
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 967231538
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)