Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_P18
         (503 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g10720.1 68417.m01752 ankyrin repeat family protein contains ...    28   4.1  
At3g46920.1 68416.m05092 protein kinase family protein similar t...    27   7.2  
At4g22720.2 68417.m03278 glycoprotease M22 family protein simila...    27   9.5  
At4g22720.1 68417.m03277 glycoprotease M22 family protein simila...    27   9.5  

>At4g10720.1 68417.m01752 ankyrin repeat family protein contains
           Pfam domain, PF00023: Ankyrin repeat
          Length = 445

 Score = 27.9 bits (59), Expect = 4.1
 Identities = 11/41 (26%), Positives = 22/41 (53%)
 Frame = -1

Query: 479 FIVSAIPIWLFWRVHSLEISTAIIWFILVTAASTWLLALAY 357
           F+  A+P+++ + V    IS   +W++   A S  ++  AY
Sbjct: 369 FLWIAVPLYVSYLVSMSVISPDTVWYVSTNAGSVIIVVFAY 409


>At3g46920.1 68416.m05092 protein kinase family protein similar to
           MAP3K delta-1 protein kinase [Arabidopsis thaliana]
           GI:2253010; contains Pfam profile: PF00069 Eukaryotic
           protein kinase domain
          Length = 1171

 Score = 27.1 bits (57), Expect = 7.2
 Identities = 12/39 (30%), Positives = 15/39 (38%)
 Frame = +2

Query: 197 LHNLPPHSFSTRXXXXXXXXXXXYHQQVSWTFHGQQHPP 313
           +H  PPHSF                QQ  +T   + HPP
Sbjct: 281 VHADPPHSFQLETVSEKPIVGKMQQQQQGYTTPSEHHPP 319


>At4g22720.2 68417.m03278 glycoprotease M22 family protein similar
           to sialylglycoprotease [Haemophilus ducreyi] GI:6942294;
           contains Pfam profile PF00814: Glycoprotease family
          Length = 353

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -3

Query: 456 LVVLEGTFIGNKHRNYLVYPGNG 388
           +V L+GT + N    Y+  PG+G
Sbjct: 21  IVTLDGTILANPRHTYITPPGHG 43


>At4g22720.1 68417.m03277 glycoprotease M22 family protein similar
           to sialylglycoprotease [Haemophilus ducreyi] GI:6942294;
           contains Pfam profile PF00814: Glycoprotease family
          Length = 353

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -3

Query: 456 LVVLEGTFIGNKHRNYLVYPGNG 388
           +V L+GT + N    Y+  PG+G
Sbjct: 21  IVTLDGTILANPRHTYITPPGHG 43


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,553,436
Number of Sequences: 28952
Number of extensions: 203734
Number of successful extensions: 505
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 492
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 505
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 898188928
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)