Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_P17
         (576 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     23   2.2  
M29489-1|AAA27724.1|  109|Apis mellifera protein ( Bee homeobox-...    23   2.9  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   5.0  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       22   5.0  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   5.0  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   6.6  
AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    21   8.7  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   8.7  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   8.7  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   8.7  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            21   8.7  

>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +1

Query: 442 DRQGAPRAGEVGFGSEGL 495
           D  G P   E+GF +EGL
Sbjct: 206 DHYGVPTLEELGFDTEGL 223


>M29489-1|AAA27724.1|  109|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone E60. ).
          Length = 109

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -1

Query: 462 SRRTLPINERGSGGDVVAKEPKTQPSG 382
           +RR    + RG+GG    K P+T  SG
Sbjct: 3   TRRVKRSDGRGNGGTPEEKRPRTAFSG 29


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = -2

Query: 407 KNQKLSPQVRSTATLPVRDDVSLLMLHSIH 318
           +N    PQ  + AT+P+     + M+H +H
Sbjct: 301 RNGLAFPQRETGATVPLHMQKYVQMIHDLH 330


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 194 IVITCENKFSKSWLH 238
           I+ITC  + SKS +H
Sbjct: 60  ILITCRKRVSKSRIH 74


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = -2

Query: 407 KNQKLSPQVRSTATLPVRDDVSLLMLHSIH 318
           +N    PQ  + AT+P+     + M+H +H
Sbjct: 301 RNGLAFPQRETGATVPLHMQKYVQMIHDLH 330


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +2

Query: 455 RREQERLALAQKVLVEPLTPPSA 523
           RR++  +A A  +L E L  PS+
Sbjct: 102 RRQRYNIAAANPLLAEKLAAPSS 124


>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +3

Query: 48  FHNYSNSHIFDYIKKHSYDIERLNI 122
           ++NY+N++  +Y KK  Y    +NI
Sbjct: 330 YNNYNNNNYNNYNKKLYYKNYIINI 354


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 530 FGRPMGV*VALPRPSEP 480
           FG P+GV  A+P    P
Sbjct: 263 FGLPVGVTAAIPTSENP 279


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 530 FGRPMGV*VALPRPSEP 480
           FG P+GV  A+P    P
Sbjct: 263 FGLPVGVTAAIPTSENP 279


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 530 FGRPMGV*VALPRPSEP 480
           FG P+GV  A+P    P
Sbjct: 263 FGLPVGVTAAIPTSENP 279


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = +1

Query: 472 VGFGSEGLGRATYTPIGRPNSFKF 543
           + +G+E + +  Y  IG    FK+
Sbjct: 246 IDYGNEAISKREYNGIGAVIEFKY 269


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,353
Number of Sequences: 438
Number of extensions: 2559
Number of successful extensions: 20
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16626408
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)