Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_P14
(561 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein. 25 2.2
CR954256-3|CAJ14144.1| 659|Anopheles gambiae cyclin protein. 24 3.0
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi... 24 3.9
EF426178-1|ABO26421.1| 155|Anopheles gambiae unknown protein. 23 9.0
EF426177-1|ABO26420.1| 155|Anopheles gambiae unknown protein. 23 9.0
EF426173-1|ABO26416.1| 155|Anopheles gambiae unknown protein. 23 9.0
EF426172-1|ABO26415.1| 155|Anopheles gambiae unknown protein. 23 9.0
EF426171-1|ABO26414.1| 155|Anopheles gambiae unknown protein. 23 9.0
EF426170-1|ABO26413.1| 155|Anopheles gambiae unknown protein. 23 9.0
EF426163-1|ABO26406.1| 155|Anopheles gambiae unknown protein. 23 9.0
EF426161-1|ABO26404.1| 155|Anopheles gambiae unknown protein. 23 9.0
AF063021-4|AAC16248.1| 93|Anopheles gambiae unknown protein. 23 9.0
>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
Length = 1036
Score = 24.6 bits (51), Expect = 2.2
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Frame = -3
Query: 553 NENIQKKIDKKRKANKERKNSKDE-----TEIRDKKRKGTDDVRKTEDNKTDQGRKGRGE 389
++ + ++ DK R + +NS E E+R++KR + + K + K R+ +
Sbjct: 621 HQRLVRECDKIRNQRGQIENSIKELQERCAELREQKRDLQEQLSKYQQTKMKVKRQEQKC 680
Query: 388 PAEKRRTVNVTEE 350
R VNV EE
Sbjct: 681 KELTARLVNVDEE 693
>CR954256-3|CAJ14144.1| 659|Anopheles gambiae cyclin protein.
Length = 659
Score = 24.2 bits (50), Expect = 3.0
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = -3
Query: 523 KRKANKERKNSKDETEIRDKKRKGTDDVRKTEDNKTDQGRKGRG 392
+RK+ K K + R K + ++D R T D+G + +G
Sbjct: 527 RRKSTKRGKKDDKGYDRRSGKEERSNDNRYTNGADRDRGDRSKG 570
Score = 22.6 bits (46), Expect = 9.0
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = -1
Query: 396 EGSRRRKDEP*MSLRSCGPSCKRPAPRTS 310
EG RRR+ R C P +R P T+
Sbjct: 490 EGRRRRRAIARARRRRCRPRARRNPPATT 518
>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
channel alpha subunitprotein.
Length = 2139
Score = 23.8 bits (49), Expect = 3.9
Identities = 7/20 (35%), Positives = 14/20 (70%)
Frame = +3
Query: 3 HPLSCMHVLSTPLVGCVMFL 62
HPL + +++T LV C++ +
Sbjct: 151 HPLFSLFIITTILVNCILMI 170
>EF426178-1|ABO26421.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 22.6 bits (46), Expect = 9.0
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +1
Query: 223 SMFRRGVPHHRCCWTAGPAGSSHCQVS 303
++F + V RC A P+ S CQ S
Sbjct: 18 ALFAQSVSALRCYQCASPSSWSDCQAS 44
>EF426177-1|ABO26420.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 22.6 bits (46), Expect = 9.0
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +1
Query: 223 SMFRRGVPHHRCCWTAGPAGSSHCQVS 303
++F + V RC A P+ S CQ S
Sbjct: 18 ALFAQSVSALRCYQCASPSSWSDCQAS 44
>EF426173-1|ABO26416.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 22.6 bits (46), Expect = 9.0
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +1
Query: 223 SMFRRGVPHHRCCWTAGPAGSSHCQVS 303
++F + V RC A P+ S CQ S
Sbjct: 18 ALFAQSVSALRCYQCASPSSWSDCQAS 44
>EF426172-1|ABO26415.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 22.6 bits (46), Expect = 9.0
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +1
Query: 223 SMFRRGVPHHRCCWTAGPAGSSHCQVS 303
++F + V RC A P+ S CQ S
Sbjct: 18 ALFAQSVSALRCYQCASPSSWSDCQAS 44
>EF426171-1|ABO26414.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 22.6 bits (46), Expect = 9.0
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +1
Query: 223 SMFRRGVPHHRCCWTAGPAGSSHCQVS 303
++F + V RC A P+ S CQ S
Sbjct: 18 ALFAQSVSALRCYQCASPSSWSDCQAS 44
>EF426170-1|ABO26413.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 22.6 bits (46), Expect = 9.0
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +1
Query: 223 SMFRRGVPHHRCCWTAGPAGSSHCQVS 303
++F + V RC A P+ S CQ S
Sbjct: 18 ALFAQSVSALRCYQCASPSSWSDCQAS 44
>EF426163-1|ABO26406.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 22.6 bits (46), Expect = 9.0
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +1
Query: 223 SMFRRGVPHHRCCWTAGPAGSSHCQVS 303
++F + V RC A P+ S CQ S
Sbjct: 18 ALFAQSVSALRCYQCASPSSWSDCQAS 44
>EF426161-1|ABO26404.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 22.6 bits (46), Expect = 9.0
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +1
Query: 223 SMFRRGVPHHRCCWTAGPAGSSHCQVS 303
++F + V RC A P+ S CQ S
Sbjct: 18 ALFAQSVSALRCYQCASPSSWSDCQAS 44
>AF063021-4|AAC16248.1| 93|Anopheles gambiae unknown protein.
Length = 93
Score = 22.6 bits (46), Expect = 9.0
Identities = 10/33 (30%), Positives = 15/33 (45%)
Frame = +3
Query: 267 CWSCRVFPLSSVPLQKSLALGACRTGRSSSVTF 365
CW R L + L +L+ +C+ S S F
Sbjct: 33 CWPSRRSRLCIIALSLTLSSSSCKQSTSLSFVF 65
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 571,061
Number of Sequences: 2352
Number of extensions: 11528
Number of successful extensions: 36
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52563375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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