Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_P13
(317 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC926.04c |hsp90|swo1|heat shock protein Hsp90|Schizosaccharom... 29 0.17
SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces po... 26 1.2
SPAC22F8.11 |plc1||phosphoinositide phospholipase C Plc1|Schizos... 26 1.2
SPCC1450.14c |ero12||ER oxidoreductin Ero1b|Schizosaccharomyces ... 25 2.8
SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein homolog|Schizosacch... 25 2.8
SPBC418.02 |||NatA N-acetyltransferase complex subunit |Schizosa... 25 3.7
SPCC1322.01 ||SPCC23B6.06|3'-5' exonuclease for RNA 3' ss-tail|S... 24 4.8
SPBC646.06c |agn2||glucan endo-1,3-alpha-glucosidase Agn2|Schizo... 24 6.4
SPAC11E3.11c |||guanyl-nucleotide exchange factor |Schizosacchar... 23 8.5
SPBP4H10.06c |cut14|smc2, smc2|condensin subunit Cut14|Schizosac... 23 8.5
SPCC1682.15 |mug122||PX/PXA domain protein|Schizosaccharomyces p... 23 8.5
SPBC16G5.07c |||prohibitin |Schizosaccharomyces pombe|chr 2|||Ma... 23 8.5
SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-gluca... 23 8.5
SPAC1142.01 ||SPAC17G6.18|DUF654 family protein|Schizosaccharomy... 23 8.5
>SPAC926.04c |hsp90|swo1|heat shock protein
Hsp90|Schizosaccharomyces pombe|chr 1|||Manual
Length = 704
Score = 29.1 bits (62), Expect = 0.17
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +2
Query: 152 VVAVTRVDLLRSC-QSYNEDGEQNEQFREHFEQFSK 256
++ V R +L+R C +NE E E F+ ++ FSK
Sbjct: 383 IMKVIRKNLVRRCLDMFNEIAEDKENFKTFYDAFSK 418
>SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 658
Score = 26.2 bits (55), Expect = 1.2
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = -3
Query: 168 LVTATTITDIRIQATSVIPDTVPWPMDRTVAMLPL 64
+V TTIT + +++ +T+ PM+ T +LP+
Sbjct: 120 MVETTTITPMVEAMITLMEETMTTPMEETTTILPM 154
>SPAC22F8.11 |plc1||phosphoinositide phospholipase C
Plc1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 899
Score = 26.2 bits (55), Expect = 1.2
Identities = 16/50 (32%), Positives = 21/50 (42%)
Frame = -1
Query: 302 DFFKSSRAGVLDHQSTLKTAQNVRETVHSVRRPRCSSGKTSTDLLWLRLQ 153
DFFK + D STL+ N + S + S K L WL L+
Sbjct: 61 DFFKMLSSRDRDAHSTLRKRSNSLSSFLSTKSTSASENKFHGGLNWLSLK 110
>SPCC1450.14c |ero12||ER oxidoreductin Ero1b|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 571
Score = 25.0 bits (52), Expect = 2.8
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 221 EQFREHFEQFSKLTDDLGHRR 283
E FREHF+ S L D +G R
Sbjct: 375 EDFREHFKTVSALMDCVGCER 395
>SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2609
Score = 25.0 bits (52), Expect = 2.8
Identities = 11/27 (40%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
Frame = -1
Query: 257 TLKTAQNVRETVHSVRR--PRCSSGKT 183
T+ Q +R+ +H++R+ PR SS KT
Sbjct: 1161 TITAEQEMRDLLHNIRQPLPRSSSSKT 1187
>SPBC418.02 |||NatA N-acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 24.6 bits (51), Expect = 3.7
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -3
Query: 270 RSSVNFENCSKCSRNCSFCSPSSL*LWQD 184
R + ++ N KC +N SP++ LW D
Sbjct: 87 RETKDYNNSLKCYQNALAISPNNESLWYD 115
>SPCC1322.01 ||SPCC23B6.06|3'-5' exonuclease for RNA 3'
ss-tail|Schizosaccharomyces pombe|chr 3|||Manual
Length = 957
Score = 24.2 bits (50), Expect = 4.8
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2
Query: 188 CQSYNEDGEQNEQFREHFEQFSKLTDDLG 274
CQ Y E G Q + +QF+K D+G
Sbjct: 422 CQVYKEVGLQTHERGLTSDQFAKFLTDIG 450
>SPBC646.06c |agn2||glucan endo-1,3-alpha-glucosidase
Agn2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 433
Score = 23.8 bits (49), Expect = 6.4
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -1
Query: 104 SPGLWIVRWLCCLSIQP 54
S GLW RW+ + QP
Sbjct: 225 SEGLWFTRWMQLIKDQP 241
>SPAC11E3.11c |||guanyl-nucleotide exchange factor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 942
Score = 23.4 bits (48), Expect = 8.5
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -1
Query: 218 SVRRPRCSSGKTSTDLLWLRLQQLRIYVSRLRR 120
S R + K +D L L L +LR+Y+S L +
Sbjct: 902 STFRRAVENWKYKSDYLQLNLVRLRVYISVLEK 934
>SPBP4H10.06c |cut14|smc2, smc2|condensin subunit
Cut14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1172
Score = 23.4 bits (48), Expect = 8.5
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 4/50 (8%)
Frame = +1
Query: 82 RTIHRPGDCIRDNRRSLDTYIRNCCSRN----QSRSVEVLPELQRGRRTE 219
+TIHR I+D +S+D + R+ + S E+ EL G E
Sbjct: 1007 KTIHRDKKKIQDTVKSIDRFKRSALEKTWREVNSSFGEIFDELLPGNSAE 1056
>SPCC1682.15 |mug122||PX/PXA domain protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 749
Score = 23.4 bits (48), Expect = 8.5
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -1
Query: 293 KSSRAGVLDHQSTL 252
+S R G+L HQSTL
Sbjct: 468 RSERTGLLSHQSTL 481
>SPBC16G5.07c |||prohibitin |Schizosaccharomyces pombe|chr
2|||Manual
Length = 354
Score = 23.4 bits (48), Expect = 8.5
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -1
Query: 155 QQLRIYVSRLRRLSRIQSPGL 93
QQ+ V R+ R SRI +PG+
Sbjct: 58 QQVAYVVERMGRFSRILTPGV 78
>SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-glucan
synthase Ags1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 2410
Score = 23.4 bits (48), Expect = 8.5
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -1
Query: 272 LDHQSTLKTAQNVRETVHSVRR 207
LDH +NV +HS+RR
Sbjct: 557 LDHFDIASAHRNVYRNIHSIRR 578
>SPAC1142.01 ||SPAC17G6.18|DUF654 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 667
Score = 23.4 bits (48), Expect = 8.5
Identities = 14/60 (23%), Positives = 25/60 (41%)
Frame = -1
Query: 269 DHQSTLKTAQNVRETVHSVRRPRCSSGKTSTDLLWLRLQQLRIYVSRLRRLSRIQSPGLW 90
DH+ + + S+ PR + +T L + R+++ R L +QS G W
Sbjct: 309 DHELSAELVARGLYAFDSILHPRFNLATGATRLPFAIPSNRRLFLCIWRYLQSLQSRGCW 368
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 999,788
Number of Sequences: 5004
Number of extensions: 15874
Number of successful extensions: 65
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 65
length of database: 2,362,478
effective HSP length: 63
effective length of database: 2,047,226
effective search space used: 85983492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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