Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_P12
         (338 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    23   1.1  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   1.5  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    21   2.6  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    20   6.0  

>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 22.6 bits (46), Expect = 1.1
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +3

Query: 255 GGKIERLKSSLFSILNELNT 314
           GG     KS++FSILN ++T
Sbjct: 293 GGFFHVKKSTIFSILNTVST 312


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 22.2 bits (45), Expect = 1.5
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +3

Query: 18   PAESILNSASQIRAVPGKSGXSGNPKFT 101
            PAE+   S  +  A P  S  SG P+ T
Sbjct: 922  PAETHAGSPCRNSASPASSDRSGTPRST 949



 Score = 21.8 bits (44), Expect = 2.0
 Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 4/55 (7%)
 Frame = -1

Query: 260 SSSSPALWGLKVPVFAPPIIGLFVVPTAGLTATGAN----*NVREPHLPTTGHAG 108
           SSS P ++ +  P+ +PP  G+      G  +   +     N+ +P  P +G  G
Sbjct: 184 SSSPPGVFPVDAPMHSPPGDGILDFSKRGQKSDADSDSDVVNLSKPGTPPSGEPG 238


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 2.6
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +3

Query: 276 KSSLFSILNELNT 314
           +S+LFS+LN L T
Sbjct: 228 RSTLFSVLNSLTT 240


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 20.2 bits (40), Expect = 6.0
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 139 SRTFQLAPVAVSPAVGTTNR 198
           S T+Q+ P  +  AVG+ +R
Sbjct: 421 SYTYQVLPFGLKTAVGSFSR 440


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,281
Number of Sequences: 336
Number of extensions: 2072
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6558670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)