Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_P10
         (778 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8ID34 Cluster: Putative uncharacterized protein PF13_0...    38   0.28 
UniRef50_Q237R3 Cluster: Putative uncharacterized protein; n=1; ...    37   0.49 
UniRef50_Q7VAX4 Cluster: Glycosyltransferase; n=1; Prochlorococc...    36   0.85 
UniRef50_Q98R18 Cluster: Putative uncharacterized protein MYPU_1...    36   1.1  
UniRef50_Q7RA10 Cluster: TERT gene; n=5; Plasmodium (Vinckeia)|R...    35   2.0  
UniRef50_A5N1M4 Cluster: Predicted ABC transporter, permease com...    33   8.0  
UniRef50_Q7RKN2 Cluster: Putative uncharacterized protein PY0286...    33   8.0  

>UniRef50_Q8ID34 Cluster: Putative uncharacterized protein
           PF13_0352; n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein PF13_0352 - Plasmodium
           falciparum (isolate 3D7)
          Length = 1046

 Score = 37.9 bits (84), Expect = 0.28
 Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
 Frame = +2

Query: 191 FIRKNTSNICTANTTMKHQKYLIASLSTKKKSLNNFLIYSFIYIQKKRYYIFRFMV*NII 370
           +I K   N CT +   K QK ++ + +   K++NN+  Y+++ I    YYI  +++ +  
Sbjct: 636 YINKGDDN-CT-DINSKEQKDILYNKNNLGKNINNYNFYNYLKIDINGYYILSYLL-SFP 692

Query: 371 LSNTYNILNIF-FSCNVIAIHVININ 445
             +  N+ N F + CN   I  +NIN
Sbjct: 693 KESITNLTNSFKYFCNF--IKTVNIN 716


>UniRef50_Q237R3 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1582

 Score = 37.1 bits (82), Expect = 0.49
 Identities = 31/125 (24%), Positives = 54/125 (43%), Gaps = 2/125 (1%)
 Frame = +2

Query: 77  LFIGFQKFIYTKIITLHIVTRISDITLISYSFFFKILPFIRKNTSNICTANTTMKHQKYL 256
           +F+    F  +  +      ++ +I +I+         FI+   +N+   +TT+  Q+ L
Sbjct: 602 IFVDSSNFFNSNFLETQSDIQLQNIQIINSKIVQS--QFIKALNANLKLTSTTITFQQQL 659

Query: 257 IAS--LSTKKKSLNNFLIYSFIYIQKKRYYIFRFMV*NIILSNTYNILNIFFSCNVIAIH 430
           I S  LS      NNF     IYI     Y+   ++  I   N YN + +    N + I+
Sbjct: 660 INSQLLSFNSLQQNNFDKQQLIYINNITLYVDESLINQIFQINGYNSIQL----NSLNIN 715

Query: 431 VININ 445
           +IN N
Sbjct: 716 IINSN 720


>UniRef50_Q7VAX4 Cluster: Glycosyltransferase; n=1; Prochlorococcus
           marinus|Rep: Glycosyltransferase - Prochlorococcus
           marinus
          Length = 388

 Score = 36.3 bits (80), Expect = 0.85
 Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 2/95 (2%)
 Frame = +2

Query: 122 LHIVTRISDITLISYSFFFKILPFIRKNTSNICTANTTMKHQKYLIASLSTKKKSLNNFL 301
           + +V+ I D+T I    FF    FI+K  S I    T       L  SL+TK++ ++ + 
Sbjct: 116 IKVVSTIHDLTFIKVKNFFPKYSFIKKIISEIRILITIFTSNYILTVSLATKRQLISKYK 175

Query: 302 IYSFIYIQKK--RYYIFRFMV*NIILSNTYNILNI 400
             + I+I KK     I    + +I+ S   N +NI
Sbjct: 176 ALN-IFIGKKLSNITIIPNAISHIVSSKESNSINI 209


>UniRef50_Q98R18 Cluster: Putative uncharacterized protein
           MYPU_1920; n=1; Mycoplasma pulmonis|Rep: Putative
           uncharacterized protein MYPU_1920 - Mycoplasma pulmonis
          Length = 167

 Score = 35.9 bits (79), Expect = 1.1
 Identities = 21/51 (41%), Positives = 31/51 (60%)
 Frame = +2

Query: 275 KKKSLNNFLIYSFIYIQKKRYYIFRFMV*NIILSNTYNILNIFFSCNVIAI 427
           KKK++N     S IY +KK  Y+ R +V NIIL N  +I  IF +  +++I
Sbjct: 6   KKKTINK----SRIYFEKKSAYMKRSLVINIILDNLLSIGIIFLNLTIVSI 52


>UniRef50_Q7RA10 Cluster: TERT gene; n=5; Plasmodium (Vinckeia)|Rep:
            TERT gene - Plasmodium yoelii yoelii
          Length = 1518

 Score = 35.1 bits (77), Expect = 2.0
 Identities = 31/126 (24%), Positives = 55/126 (43%)
 Frame = +2

Query: 200  KNTSNICTANTTMKHQKYLIASLSTKKKSLNNFLIYSFIYIQKKRYYIFRFMV*NIILSN 379
            KN SN+   +T  K   Y+  +       +NN   +S+   +K  +Y       NI+  N
Sbjct: 1150 KNESNLINDDTNSKQSNYMKKNDDNSSGYINN--EHSYKNFEKSNFYREEKKKKNIVREN 1207

Query: 380  TYNILNIFFSCNVIAIHVININY*QLTIKQYILQFIVLMF*ICQRQTGFVQNIIIPLECL 559
               I+NI+   N++ I    I++       Y L F   +   C+ +  ++ NI I L  L
Sbjct: 1208 KLKIINIYSLKNLVIILYTIISH-----IPYFLFFKNKIKVECKNRKDYMHNIDILLIIL 1262

Query: 560  AKVSVD 577
             ++ +D
Sbjct: 1263 NEIKLD 1268


>UniRef50_A5N1M4 Cluster: Predicted ABC transporter, permease
           component; n=1; Clostridium kluyveri DSM 555|Rep:
           Predicted ABC transporter, permease component -
           Clostridium kluyveri DSM 555
          Length = 389

 Score = 33.1 bits (72), Expect = 8.0
 Identities = 17/52 (32%), Positives = 28/52 (53%)
 Frame = +2

Query: 149 ITLISYSFFFKILPFIRKNTSNICTANTTMKHQKYLIASLSTKKKSLNNFLI 304
           + +I Y   FKI+ F  K+T+     N T+ ++    +S+ T  K+LNN  I
Sbjct: 28  LPIIMYPAMFKIIDFTMKDTTKSIEKNITIAYKGNESSSVYTMLKNLNNITI 79


>UniRef50_Q7RKN2 Cluster: Putative uncharacterized protein PY02868;
           n=3; cellular organisms|Rep: Putative uncharacterized
           protein PY02868 - Plasmodium yoelii yoelii
          Length = 1562

 Score = 33.1 bits (72), Expect = 8.0
 Identities = 29/136 (21%), Positives = 60/136 (44%), Gaps = 4/136 (2%)
 Frame = +2

Query: 101 IYTKIITLHIVTRISD---ITLISYSFFFKILPFIRKNT-SNICTANTTMKHQKYLIASL 268
           IY  II L  + ++S      + +Y   ++    I+K    +    N  +K+ ++     
Sbjct: 126 IYNSIIFLTEIIKLSSHVGTKIFAYYQIYRSYAIIQKILFKDFLIHNLNIKNNEHFYVLK 185

Query: 269 STKKKSLNNFLIYSFIYIQKKRYYIFRFMV*NIILSNTYNILNIFFSCNVIAIHVININY 448
             +   ++N +I + I +      + +    NI L   +  +NI   CN I  +++ I +
Sbjct: 186 KNEAIFIDNHIILNIINMLNSENKLLK----NIGLYLCHIFINIISQCNYIINYILLIIF 241

Query: 449 *QLTIKQYILQFIVLM 496
            Q+   +YIL F +L+
Sbjct: 242 HQINYDEYILAFSLLV 257


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 574,245,010
Number of Sequences: 1657284
Number of extensions: 9548421
Number of successful extensions: 27099
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 25678
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27086
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 65438977305
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)