Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_P10
         (778 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058430-1|AAL13659.1|  538|Drosophila melanogaster GH20840p pro...    30   4.1  
AE014297-2707|AAF55699.1|  538|Drosophila melanogaster CG11407-P...    30   4.1  
X95845-1|CAA65103.1|  398|Drosophila melanogaster tap protein.         29   9.4  
AY119146-1|AAM51006.1|  398|Drosophila melanogaster RE52048p pro...    29   9.4  
AF022883-1|AAC80572.1|  398|Drosophila melanogaster basic helix-...    29   9.4  
AE014296-2893|AAF49352.1|  398|Drosophila melanogaster CG7659-PA...    29   9.4  

>AY058430-1|AAL13659.1|  538|Drosophila melanogaster GH20840p
           protein.
          Length = 538

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 16/37 (43%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
 Frame = +2

Query: 365 IILSNTYNILNIFFSC--NVIAIHVININY*QLTIKQ 469
           II  NT +I  + ++C  N IA H +NI+Y Q TI++
Sbjct: 86  IIARNTTHISAVAYACFFNGIAFHSLNISYEQSTIEK 122


>AE014297-2707|AAF55699.1|  538|Drosophila melanogaster CG11407-PA
           protein.
          Length = 538

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 16/37 (43%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
 Frame = +2

Query: 365 IILSNTYNILNIFFSC--NVIAIHVININY*QLTIKQ 469
           II  NT +I  + ++C  N IA H +NI+Y Q TI++
Sbjct: 86  IIARNTTHISAVAYACFFNGIAFHSLNISYEQSTIEK 122


>X95845-1|CAA65103.1|  398|Drosophila melanogaster tap protein.
          Length = 398

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +2

Query: 20  PPGGGRAHGMSHPSLTPGSLFIGFQKFIY 106
           P  GG  HGM +P   PG  F G  +F +
Sbjct: 279 PAMGGFQHGMDYPQQPPGFDFTGSMRFYH 307


>AY119146-1|AAM51006.1|  398|Drosophila melanogaster RE52048p
           protein.
          Length = 398

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +2

Query: 20  PPGGGRAHGMSHPSLTPGSLFIGFQKFIY 106
           P  GG  HGM +P   PG  F G  +F +
Sbjct: 279 PAMGGFQHGMDYPQQPPGFDFTGSMRFYH 307


>AF022883-1|AAC80572.1|  398|Drosophila melanogaster basic
           helix-loop-helix neuraltranscription factor BIPAROUS
           protein.
          Length = 398

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +2

Query: 20  PPGGGRAHGMSHPSLTPGSLFIGFQKFIY 106
           P  GG  HGM +P   PG  F G  +F +
Sbjct: 279 PAMGGFQHGMDYPQQPPGFDFTGSMRFYH 307


>AE014296-2893|AAF49352.1|  398|Drosophila melanogaster CG7659-PA
           protein.
          Length = 398

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +2

Query: 20  PPGGGRAHGMSHPSLTPGSLFIGFQKFIY 106
           P  GG  HGM +P   PG  F G  +F +
Sbjct: 279 PAMGGFQHGMDYPQQPPGFDFTGSMRFYH 307


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,357,436
Number of Sequences: 53049
Number of extensions: 412424
Number of successful extensions: 1139
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1139
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3602427675
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)