Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_P09
         (409 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A6P1E7 Cluster: Putative uncharacterized protein; n=1; ...    33   1.7  
UniRef50_A0THT1 Cluster: Outermembrane fimbrial usher protein pr...    33   2.2  
UniRef50_A2UHL8 Cluster: Putative uncharacterized protein; n=4; ...    33   2.9  
UniRef50_A0CSD7 Cluster: Chromosome undetermined scaffold_26, wh...    33   2.9  
UniRef50_Q5K252 Cluster: Putative regulatory subunit of protein ...    32   3.9  
UniRef50_Q8YFB6 Cluster: Sensor protein; n=12; Rhizobiales|Rep: ...    32   5.1  
UniRef50_A7RT79 Cluster: Predicted protein; n=1; Nematostella ve...    31   6.8  

>UniRef50_A6P1E7 Cluster: Putative uncharacterized protein; n=1;
           Bacteroides capillosus ATCC 29799|Rep: Putative
           uncharacterized protein - Bacteroides capillosus ATCC
           29799
          Length = 466

 Score = 33.5 bits (73), Expect = 1.7
 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = -3

Query: 218 IRTYIGRANITNNEKSKPVKILVSKSTSFLNMHAXFVIXL-KRREFVI 78
           +R  IG   +TN  K     I+V+    FLN H  + I L +RR +VI
Sbjct: 222 VRELIGTTAVTNRGKITAKNIIVATHFPFLNKHGSYFIKLYQRRSYVI 269


>UniRef50_A0THT1 Cluster: Outermembrane fimbrial usher protein
           precursor; n=3; Burkholderia cepacia complex|Rep:
           Outermembrane fimbrial usher protein precursor -
           Burkholderia ambifaria MC40-6
          Length = 900

 Score = 33.1 bits (72), Expect = 2.2
 Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
 Frame = -3

Query: 221 VIRTYIGRANITNNEKSKPVKILVSKSTSFLNMHAXFVIXLKRREFVIFVRDDD*EMRC- 45
           V  TY+G+A  +NN       ++++ +   ++ H  F+  L  +E  IFV D    MRC 
Sbjct: 782 VTYTYVGQA-FSNNGMPLSDSVILNGAMPMIDSHGGFIAELDHKEDEIFVVDGPTLMRCP 840

Query: 44  LFAKKE 27
           L  K++
Sbjct: 841 LHVKRQ 846


>UniRef50_A2UHL8 Cluster: Putative uncharacterized protein; n=4;
           Escherichia coli|Rep: Putative uncharacterized protein -
           Escherichia coli B
          Length = 49

 Score = 32.7 bits (71), Expect = 2.9
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = +3

Query: 207 VRSNDILWRREHSDQSLIILGYLEITLEWLIFLFDLYN 320
           + S+ I WR+   D+++I+LG L   LE + FL  L N
Sbjct: 12  MHSHSIAWRKRVIDKAIIVLGALIALLELIRFLLQLLN 49


>UniRef50_A0CSD7 Cluster: Chromosome undetermined scaffold_26, whole
           genome shotgun sequence; n=3; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_26,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 347

 Score = 32.7 bits (71), Expect = 2.9
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = -1

Query: 301 KISHSRVISKYPSMIKLWSECSRRHRMSLERTLAGLISQTTKNRSRL 161
           K  H R +SK+   +++W+E S +    ++     LI +  + RSRL
Sbjct: 170 KTQHERALSKHEKQMQVWNELSTKISSRMKNNSTTLIERQAQYRSRL 216


>UniRef50_Q5K252 Cluster: Putative regulatory subunit of protein
           phosphatase 2A; n=1; Guillardia theta|Rep: Putative
           regulatory subunit of protein phosphatase 2A -
           Guillardia theta (Cryptomonas phi)
          Length = 157

 Score = 32.3 bits (70), Expect = 3.9
 Identities = 10/27 (37%), Positives = 20/27 (74%)
 Frame = -1

Query: 256 KLWSECSRRHRMSLERTLAGLISQTTK 176
           +LW EC+++H+M++E+  A  +S+  K
Sbjct: 119 RLWEECTQKHKMNMEKNAAAHLSRKQK 145


>UniRef50_Q8YFB6 Cluster: Sensor protein; n=12; Rhizobiales|Rep:
           Sensor protein - Brucella melitensis
          Length = 1305

 Score = 31.9 bits (69), Expect = 5.1
 Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
 Frame = +1

Query: 22  ILSFFANRHLISQSSSLTKITNSRRFNXITKXACIFKKLVLFDTNI-LTGFDFSLFVILA 198
           I+S FA RHL  Q      I N+RR   I   A  F    L   NI L    F  F  +A
Sbjct: 365 IISSFAKRHLAEQRGLTKIILNTRRITIIVILALAFSYYRLTSNNIHLASIGFVSFAAVA 424

Query: 199 R 201
           +
Sbjct: 425 Q 425


>UniRef50_A7RT79 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 363

 Score = 31.5 bits (68), Expect = 6.8
 Identities = 18/52 (34%), Positives = 29/52 (55%)
 Frame = +1

Query: 7   IKT*QILSFFANRHLISQSSSLTKITNSRRFNXITKXACIFKKLVLFDTNIL 162
           IKT  ++     + L S  SSL+K+TN    N I+  A   ++LV++  NI+
Sbjct: 163 IKT-AVVGMIYQKVLSSSRSSLSKLTNGHIMNLISNDAKRMERLVMYTMNIV 213


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 369,121,696
Number of Sequences: 1657284
Number of extensions: 6353957
Number of successful extensions: 15934
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 15618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15928
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 18196175969
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)