Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_P09
         (409 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    27   0.094
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    24   0.66 

>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 26.6 bits (56), Expect = 0.094
 Identities = 13/32 (40%), Positives = 23/32 (71%)
 Frame = +3

Query: 246 DQSLIILGYLEITLEWLIFLFDLYNITMYLIV 341
           D SLI+   + IT+ +++ L DLY +T+Y+I+
Sbjct: 210 DNSLILDLLVFITINFVVLLGDLY-VTLYIIL 240



 Score = 23.0 bits (47), Expect = 1.2
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = +3

Query: 258 IILGYLEITLEWLIFLFDLYN 320
           ++LG + +T++  +F F L+N
Sbjct: 107 VLLGVMVVTVDLHVFFFTLFN 127


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 23.8 bits (49), Expect = 0.66
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +2

Query: 263 TGIFRNYSGMANLFIRLIQYYNVFNR 340
           T  FRN +    +FI  I+ YNV  R
Sbjct: 215 TNGFRNVAESRKIFIECIEQYNVILR 240


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,627
Number of Sequences: 336
Number of extensions: 1768
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8857716
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)