Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_P09
         (409 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_02_0460 + 9567656-9567766,9567849-9567949,9568527-9568647,956...    28   3.3  
02_04_0477 + 23257196-23257289,23257881-23257989,23258093-232582...    27   5.7  

>09_02_0460 +
           9567656-9567766,9567849-9567949,9568527-9568647,
           9568733-9568792,9569022-9569089,9569469-9569535,
           9569586-9569666,9570152-9570217,9570372-9570410,
           9570527-9570609,9570712-9570823,9570902-9570982,
           9571132-9571290,9571397-9571504,9571570-9571674,
           9571765-9571905,9572007-9572147,9572205-9572426,
           9573617-9573730,9573830-9574045,9574373-9574432,
           9574513-9574626,9574735-9574820,9574904-9575012,
           9575099-9575277,9575357-9575429
          Length = 938

 Score = 27.9 bits (59), Expect = 3.3
 Identities = 12/18 (66%), Positives = 15/18 (83%)
 Frame = +3

Query: 270 YLEITLEWLIFLFDLYNI 323
           YLEITLE+ +FLF L+ I
Sbjct: 156 YLEITLEFSVFLFPLFVI 173


>02_04_0477 +
           23257196-23257289,23257881-23257989,23258093-23258285,
           23258406-23258542,23258878-23259166,23259265-23259371,
           23259448-23259592,23259817-23260015,23260095-23260338,
           23260418-23260658
          Length = 585

 Score = 27.1 bits (57), Expect = 5.7
 Identities = 14/51 (27%), Positives = 26/51 (50%)
 Frame = -1

Query: 289 SRVISKYPSMIKLWSECSRRHRMSLERTLAGLISQTTKNRSRLKYWYQKVL 137
           +R IS+YP+  + + +  R     LERT+ G  S +     +L+    ++L
Sbjct: 511 TRSISRYPTAKRRFDDLVRSLSEELERTMGGSQSGSVSQMQKLRSGISRML 561


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,401,180
Number of Sequences: 37544
Number of extensions: 157627
Number of successful extensions: 321
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 318
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 321
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 718652880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)