Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_P08
         (559 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    23   1.8  
AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine 3-mon...    23   1.8  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    23   1.8  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    23   1.8  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   5.4  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   5.4  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   9.5  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   9.5  

>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 8/25 (32%), Positives = 18/25 (72%)
 Frame = +2

Query: 323 KYNKKVNHTIQNNYG*LIHKLLRTM 397
           K  K+++ T+Q N+G + + +L++M
Sbjct: 304 KLQKEIDLTLQENHGKISYNVLQSM 328


>AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 212

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 383 VCELVSHNYFEWYDLL 336
           +CEL  +NY E  DL+
Sbjct: 122 ICELAMYNYVEMRDLV 137


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 383 VCELVSHNYFEWYDLL 336
           +CEL  +NY E  DL+
Sbjct: 355 ICELAMYNYVEMRDLV 370


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 383 VCELVSHNYFEWYDLL 336
           +CEL  +NY E  DL+
Sbjct: 355 ICELAMYNYVEMRDLV 370


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = +2

Query: 284 TKKKNYNYNSTTLKYNKKVNHTIQNNY 364
           ++ + YNY +   +Y    NH    NY
Sbjct: 345 SRGRQYNYPNPQQQYYYNKNHPNSENY 371


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = +2

Query: 284 TKKKNYNYNSTTLKYNKKVNHTIQNNY 364
           ++ + YNY +   +Y    NH    NY
Sbjct: 293 SRGRQYNYPNPQQQYYYNKNHPNSENY 319


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +2

Query: 287 KKKNYNYNSTTLKYNKKVNHTIQNNY 364
           +K N N+N    KY  K     +N+Y
Sbjct: 321 EKSNLNHNEQLRKYLCKNEDETKNHY 346


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +2

Query: 287 KKKNYNYNSTTLKYNKKVNHTIQNNY 364
           +K N N+N    KY  K     +N+Y
Sbjct: 213 EKSNLNHNEQLRKYLCKNEDETKNHY 238


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,221
Number of Sequences: 336
Number of extensions: 1804
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13681771
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)