Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_P08
         (559 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68338-7|CAA92756.2|  866|Caenorhabditis elegans Hypothetical pr...    27   6.9  
AL031627-16|CAA20968.1|  262|Caenorhabditis elegans Hypothetical...    27   9.1  
AF022980-12|AAG24186.1|  515|Caenorhabditis elegans Hypothetical...    27   9.1  

>Z68338-7|CAA92756.2|  866|Caenorhabditis elegans Hypothetical
           protein T24B8.4 protein.
          Length = 866

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 13/46 (28%), Positives = 24/46 (52%)
 Frame = +2

Query: 230 LIRRPFRRSLSHLQLLATTKKKNYNYNSTTLKYNKKVNHTIQNNYG 367
           L R  FRRS     +++++ + N N+++ TL+        +  NYG
Sbjct: 307 LPRATFRRSPLRSSMMSSSSEVNNNFDNDTLRPKPVSKWHVDTNYG 352


>AL031627-16|CAA20968.1|  262|Caenorhabditis elegans Hypothetical
           protein Y102A5C.27 protein.
          Length = 262

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +1

Query: 313 DNIKIQ*KSKSYHSK*LWLTNSQTLEDND 399
           +N +IQ   +SY  K LW+   +T  +ND
Sbjct: 51  NNYRIQSSDRSYAGKSLWILYKETAANND 79


>AF022980-12|AAG24186.1|  515|Caenorhabditis elegans Hypothetical
           protein T03D3.1 protein.
          Length = 515

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = -2

Query: 186 GRNLSLIFCVLFILIHGLL 130
           G  L L+FC+LFI++H +L
Sbjct: 484 GDILLLVFCILFIILHTVL 502


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,031,719
Number of Sequences: 27780
Number of extensions: 168191
Number of successful extensions: 407
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 391
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 407
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1144922904
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)