Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_P07
         (526 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0DQJ9 Cluster: Chromosome undetermined scaffold_6, who...    33   5.3  
UniRef50_Q4Q3R0 Cluster: Putative uncharacterized protein; n=1; ...    32   7.0  

>UniRef50_A0DQJ9 Cluster: Chromosome undetermined scaffold_6, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_6,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 1145

 Score = 32.7 bits (71), Expect = 5.3
 Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
 Frame = -2

Query: 351 MF*LPTFL--LIRNETVVLIDADTSLCASLMYHYVNYFVY 238
           +F LP ++  LI  + + LIDADT     L+YH   YFVY
Sbjct: 117 LFYLPNYIAVLIFLKVISLIDADTYTQQQLLYHASIYFVY 156


>UniRef50_Q4Q3R0 Cluster: Putative uncharacterized protein; n=1;
            Leishmania major|Rep: Putative uncharacterized protein -
            Leishmania major
          Length = 1145

 Score = 32.3 bits (70), Expect = 7.0
 Identities = 14/24 (58%), Positives = 14/24 (58%)
 Frame = +1

Query: 433  WRMVNPHLTIVMRSGLTNTSSGER 504
            WR VNPH   VM  G T  SS ER
Sbjct: 936  WRAVNPHELAVMDGGCTGVSSSER 959


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 440,700,086
Number of Sequences: 1657284
Number of extensions: 7590737
Number of successful extensions: 13313
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 13038
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13310
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 33037407449
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)