Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_P07
         (526 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY320644-1|AAQ21949.1|   96|Homo sapiens immunoglobulin kappa ch...    31   3.3  
AY320799-1|AAQ22092.1|   95|Homo sapiens immunoglobulin kappa ch...    30   5.7  
X72492-1|CAA51160.1|  121|Homo sapiens Ig kappa light chain (VJ)...    29   7.6  

>AY320644-1|AAQ21949.1|   96|Homo sapiens immunoglobulin kappa chain
           variable region protein.
          Length = 96

 Score = 30.7 bits (66), Expect = 3.3
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +3

Query: 243 QNNLHNDTSD*HIGWYQRRSAQPSRSL 323
           Q+ LHN  +  H+ WYQ++  QP + L
Sbjct: 19  QSVLHNSDNKNHLAWYQQKPGQPPKLL 45


>AY320799-1|AAQ22092.1|   95|Homo sapiens immunoglobulin kappa chain
           variable region protein.
          Length = 95

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +3

Query: 243 QNNLHNDTSD*HIGWYQRRSAQPSRSL 323
           Q+ LH+  +  H+ WYQ++S QP + L
Sbjct: 18  QSVLHSFNNKNHLAWYQQKSGQPPKLL 44


>X72492-1|CAA51160.1|  121|Homo sapiens Ig kappa light chain (VJ)
           protein.
          Length = 121

 Score = 29.5 bits (63), Expect = 7.6
 Identities = 10/27 (37%), Positives = 19/27 (70%)
 Frame = +3

Query: 243 QNNLHNDTSD*HIGWYQRRSAQPSRSL 323
           Q+ L+N  ++ ++ WYQ++S QP + L
Sbjct: 34  QSVLYNSNNEDYLAWYQQKSGQPPKLL 60


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,721,975
Number of Sequences: 237096
Number of extensions: 1030067
Number of successful extensions: 1876
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1876
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5046825278
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)