Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_P05
(655 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VEN6 Cluster: CG5184-PA, isoform A; n=7; Endopterygot... 120 4e-26
UniRef50_UPI00015B62C0 Cluster: PREDICTED: similar to CG5184-PA;... 101 1e-20
UniRef50_Q8SXD7 Cluster: RH70248p; n=2; Drosophila melanogaster|... 81 2e-14
UniRef50_UPI00003C036B Cluster: PREDICTED: similar to mitochondr... 78 2e-13
UniRef50_UPI0000586F02 Cluster: PREDICTED: hypothetical protein ... 74 3e-12
UniRef50_Q4S8D4 Cluster: Chromosome undetermined SCAF14706, whol... 63 5e-09
UniRef50_Q23155 Cluster: Putative uncharacterized protein; n=2; ... 63 6e-09
UniRef50_P82912 Cluster: 28S ribosomal protein S11, mitochondria... 55 2e-06
UniRef50_P46746 Cluster: Mitochondrial ribosomal protein S11; n=... 46 8e-04
UniRef50_Q5DCW6 Cluster: SJCHGC02467 protein; n=1; Schistosoma j... 42 0.013
UniRef50_A2QQ89 Cluster: Contig An08c0050, complete genome; n=6;... 40 0.039
UniRef50_P27419 Cluster: Chloroplast 30S ribosomal protein S11; ... 40 0.052
UniRef50_A6YE90 Cluster: Ribosomal protein S11; n=5; cellular or... 40 0.069
UniRef50_Q1IS96 Cluster: 30S ribosomal protein S11; n=274; cellu... 38 0.16
UniRef50_Q12G79 Cluster: 30S ribosomal protein S11; n=186; cellu... 37 0.49
UniRef50_Q98Q07 Cluster: 30S ribosomal protein S11; n=33; Bacter... 36 0.64
UniRef50_A6BM57 Cluster: Ribosomal protein S11; n=1; Gnetum parv... 36 0.85
UniRef50_P56802 Cluster: Chloroplast 30S ribosomal protein S11; ... 36 0.85
UniRef50_Q9TLV1 Cluster: Chloroplast 30S ribosomal protein S11; ... 36 1.1
UniRef50_Q5A3W6 Cluster: Potential spliceosomal U4/U6 snRNP prot... 35 2.0
UniRef50_Q9TCB8 Cluster: Ribosomal protein S11; n=1; Nephroselmi... 34 2.6
UniRef50_Q6SGQ1 Cluster: Putative uncharacterized protein; n=1; ... 34 3.4
UniRef50_P04969 Cluster: 30S ribosomal protein S11; n=155; cellu... 34 3.4
UniRef50_P30059 Cluster: Plastid 30S ribosomal protein S11; n=4;... 34 3.4
UniRef50_Q5ZRS8 Cluster: DnaA-like family protein; n=4; Legionel... 33 4.5
UniRef50_Q0QIP5 Cluster: Ribosomal protein S11; n=1; Oltmannsiel... 33 4.5
UniRef50_Q7R835 Cluster: Putative uncharacterized protein PY0738... 33 4.5
UniRef50_Q9PQN5 Cluster: 30S ribosomal protein S11; n=1; Ureapla... 33 4.5
UniRef50_Q49081 Cluster: 30S ribosomal protein; n=1; Mycoplasma ... 33 6.0
UniRef50_Q9G885 Cluster: Ribosomal protein S11; n=1; Malawimonas... 33 6.0
UniRef50_Q05FK3 Cluster: 30S ribosomal protein S11; n=2; cellula... 33 6.0
UniRef50_P59375 Cluster: 30S ribosomal protein S11; n=85; cellul... 33 7.9
>UniRef50_Q9VEN6 Cluster: CG5184-PA, isoform A; n=7;
Endopterygota|Rep: CG5184-PA, isoform A - Drosophila
melanogaster (Fruit fly)
Length = 200
Score = 120 bits (288), Expect = 4e-26
Identities = 56/131 (42%), Positives = 76/131 (58%)
Frame = -2
Query: 459 IPAPDEGVQGEKIIDLDSALKTKQNLFPTLESDYQLYNGIPYKDLPICNIRVSHNNTIFT 280
+PA DEG GEK +D+D+ + K FP + L+NGIP+ +LPICNIRVS NNTI +
Sbjct: 45 LPAKDEGTVGEKTVDIDTLINRKAKFFPDASTANTLFNGIPFNELPICNIRVSPNNTIIS 104
Query: 279 LTEPDGKVRIIRSCGMEGFKNTKKGXXXXXXXXXXXXXTKAVVQGYNTXXXXXXRLGTRA 100
+T+ G +R+IRSCG+EGFKNT+KG KA+ G+ T LG
Sbjct: 105 VTDHKGVLRLIRSCGIEGFKNTRKGTNIAAQATAVTISGKAIELGWKTVRVKVRGLGPGR 164
Query: 99 IVCSQRLTNGG 67
+ + L GG
Sbjct: 165 MSAIKGLQMGG 175
Score = 74.9 bits (176), Expect = 1e-12
Identities = 32/39 (82%), Positives = 38/39 (97%)
Frame = -3
Query: 119 QGLGPGRLSAVKGLQMGGLNIVSITDNTHVSWNPPRXKE 3
+GLGPGR+SA+KGLQMGGLNIVSITDNTHVS+NPPR ++
Sbjct: 158 RGLGPGRMSAIKGLQMGGLNIVSITDNTHVSFNPPRPRK 196
>UniRef50_UPI00015B62C0 Cluster: PREDICTED: similar to CG5184-PA;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
CG5184-PA - Nasonia vitripennis
Length = 212
Score = 101 bits (243), Expect = 1e-20
Identities = 52/131 (39%), Positives = 73/131 (55%)
Frame = -2
Query: 459 IPAPDEGVQGEKIIDLDSALKTKQNLFPTLESDYQLYNGIPYKDLPICNIRVSHNNTIFT 280
+P DEG GEK +D+D L +++LFP + +L++GIPYK+LPI NI+V+ NNTI T
Sbjct: 58 MPGKDEGTAGEKSVDIDG-LGVQEDLFPDENTPNRLFDGIPYKELPIFNIKVTPNNTIIT 116
Query: 279 LTEPDGKVRIIRSCGMEGFKNTKKGXXXXXXXXXXXXXTKAVVQGYNTXXXXXXRLGTRA 100
LT+ G V I++SCG EGF+ +KG TKA G T +G
Sbjct: 117 LTDFKGGVHILKSCGTEGFRTARKGTNIAAQTTAISISTKAQSIGVRTARVRIRGIGPGR 176
Query: 99 IVCSQRLTNGG 67
+ + L GG
Sbjct: 177 LAAIKGLQMGG 187
Score = 72.1 bits (169), Expect = 1e-11
Identities = 30/39 (76%), Positives = 36/39 (92%)
Frame = -3
Query: 119 QGLGPGRLSAVKGLQMGGLNIVSITDNTHVSWNPPRXKE 3
+G+GPGRL+A+KGLQMGG NIVSITDNTHVSW PPR ++
Sbjct: 170 RGIGPGRLAAIKGLQMGGTNIVSITDNTHVSWCPPRPRK 208
>UniRef50_Q8SXD7 Cluster: RH70248p; n=2; Drosophila
melanogaster|Rep: RH70248p - Drosophila melanogaster
(Fruit fly)
Length = 178
Score = 81.4 bits (192), Expect = 2e-14
Identities = 48/131 (36%), Positives = 65/131 (49%)
Frame = -2
Query: 459 IPAPDEGVQGEKIIDLDSALKTKQNLFPTLESDYQLYNGIPYKDLPICNIRVSHNNTIFT 280
+PA DEG GEK +D+D+ + +LPICNIRVS NNTI +
Sbjct: 45 LPAKDEGTVGEKTVDIDTLIN----------------------ELPICNIRVSPNNTIIS 82
Query: 279 LTEPDGKVRIIRSCGMEGFKNTKKGXXXXXXXXXXXXXTKAVVQGYNTXXXXXXRLGTRA 100
+T+ G +R+IRSCG+EGFKNT+KG KA+ G+ T LG
Sbjct: 83 VTDHKGVLRLIRSCGIEGFKNTRKGTNIAAQATAVTISGKAIELGWKTVRVKVRGLGPGR 142
Query: 99 IVCSQRLTNGG 67
+ + L GG
Sbjct: 143 MSAIKGLQMGG 153
Score = 74.9 bits (176), Expect = 1e-12
Identities = 32/39 (82%), Positives = 38/39 (97%)
Frame = -3
Query: 119 QGLGPGRLSAVKGLQMGGLNIVSITDNTHVSWNPPRXKE 3
+GLGPGR+SA+KGLQMGGLNIVSITDNTHVS+NPPR ++
Sbjct: 136 RGLGPGRMSAIKGLQMGGLNIVSITDNTHVSFNPPRPRK 174
>UniRef50_UPI00003C036B Cluster: PREDICTED: similar to mitochondrial
ribosomal protein S11 CG5184-PA, isoform A; n=1; Apis
mellifera|Rep: PREDICTED: similar to mitochondrial
ribosomal protein S11 CG5184-PA, isoform A - Apis
mellifera
Length = 196
Score = 77.8 bits (183), Expect = 2e-13
Identities = 42/110 (38%), Positives = 60/110 (54%)
Frame = -2
Query: 438 VQGEKIIDLDSALKTKQNLFPTLESDYQLYNGIPYKDLPICNIRVSHNNTIFTLTEPDGK 259
++GEK ID +K+K +LFP + YQ ++G+ Y L + NI+ SHNNTI +LT+ G
Sbjct: 50 MEGEKAIDFID-VKSK-SLFPDASTLYQFFDGVQYTQLHVINIKSSHNNTIMSLTDFKGS 107
Query: 258 VRIIRSCGMEGFKNTKKGXXXXXXXXXXXXXTKAVVQGYNTXXXXXXRLG 109
I+ S G+EGFKNTKKG T+ + G T +G
Sbjct: 108 GIILHSAGLEGFKNTKKGTNIAAQQAAITFGTRVLNHGIKTVKLRIQGIG 157
Score = 65.3 bits (152), Expect = 1e-09
Identities = 27/39 (69%), Positives = 34/39 (87%)
Frame = -3
Query: 119 QGLGPGRLSAVKGLQMGGLNIVSITDNTHVSWNPPRXKE 3
QG+GPGR+ A+KGLQ+ LNIVSITD+T VSWNPPR ++
Sbjct: 154 QGIGPGRMGAIKGLQLTELNIVSITDDTRVSWNPPRPRK 192
>UniRef50_UPI0000586F02 Cluster: PREDICTED: hypothetical protein
isoform 1; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: hypothetical protein isoform 1 -
Strongylocentrotus purpuratus
Length = 261
Score = 73.7 bits (173), Expect = 3e-12
Identities = 55/170 (32%), Positives = 73/170 (42%), Gaps = 13/170 (7%)
Frame = -2
Query: 531 SVTSVVRLFQTSTPQATEKFVHKRIPAPDEGVQGEKIIDLDSALKTKQ------------ 388
S+ S+ RL Q +T AT P PD G + D A +T +
Sbjct: 71 SLVSIRRLQQDTT--ATTSATGASSPIPDPSSGGHSLEDAAIAEETAEGNETLFEDEHGS 128
Query: 387 NLFPTLESDYQL-YNGIPYKDLPICNIRVSHNNTIFTLTEPDGKVRIIRSCGMEGFKNTK 211
N+F S L +NGIPY LPI NI+ ++NNT ++ E G+ SCG EGFKN K
Sbjct: 129 NMFIAPSSTESLIFNGIPYDQLPIVNIKATYNNTHVSVAEHTGRTVARTSCGTEGFKNAK 188
Query: 210 KGXXXXXXXXXXXXXTKAVVQGYNTXXXXXXRLGTRAIVCSQRLTNGGFE 61
KG TKAV +G N +G + L GG +
Sbjct: 189 KGTAIAAQTAAIAAATKAVDKGMNAVRVVIKGIGPGRQTSIKGLQMGGLD 238
Score = 53.2 bits (122), Expect = 5e-06
Identities = 24/39 (61%), Positives = 32/39 (82%)
Frame = -3
Query: 119 QGLGPGRLSAVKGLQMGGLNIVSITDNTHVSWNPPRXKE 3
+G+GPGR +++KGLQMGGL+IVSITDNT V N R ++
Sbjct: 219 KGIGPGRQTSIKGLQMGGLDIVSITDNTPVPHNGCRPRK 257
>UniRef50_Q4S8D4 Cluster: Chromosome undetermined SCAF14706, whole
genome shotgun sequence; n=3; cellular organisms|Rep:
Chromosome undetermined SCAF14706, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 215
Score = 63.3 bits (147), Expect = 5e-09
Identities = 31/95 (32%), Positives = 44/95 (46%)
Frame = -2
Query: 345 GIPYKDLPICNIRVSHNNTIFTLTEPDGKVRIIRSCGMEGFKNTKKGXXXXXXXXXXXXX 166
G P++ LPI +++ ++NNT +T+ GK + SCG EGFKN KK
Sbjct: 98 GTPFEQLPIAHVKATYNNTHIQVTDSAGKSMVRTSCGTEGFKNIKKSTPIAAQTAGISAA 157
Query: 165 TKAVVQGYNTXXXXXXRLGTRAIVCSQRLTNGGFE 61
KA +G LG + + LT GG E
Sbjct: 158 AKATAKGVTFVRVVVKGLGPGRLSAIKGLTMGGLE 192
Score = 55.6 bits (128), Expect = 1e-06
Identities = 26/39 (66%), Positives = 31/39 (79%)
Frame = -3
Query: 119 QGLGPGRLSAVKGLQMGGLNIVSITDNTHVSWNPPRXKE 3
+GLGPGRLSA+KGL MGGL +VSITDNT V N R ++
Sbjct: 173 KGLGPGRLSAIKGLTMGGLEVVSITDNTPVPHNGCRPRK 211
>UniRef50_Q23155 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 208
Score = 62.9 bits (146), Expect = 6e-09
Identities = 33/104 (31%), Positives = 49/104 (47%)
Frame = -2
Query: 378 PTLESDYQLYNGIPYKDLPICNIRVSHNNTIFTLTEPDGKVRIIRSCGMEGFKNTKKGXX 199
PT E+ Q ++G+ Y +LP+ IR S NNT+ T+ + +V SC +EGFKN +K
Sbjct: 80 PTAETLKQQFDGVAYHELPLVYIRASKNNTLVTVMDNKNEVITSTSCRLEGFKNARKKTT 139
Query: 198 XXXXXXXXXXXTKAVVQGYNTXXXXXXRLGTRAIVCSQRLTNGG 67
+ V +G T LG + C + LT G
Sbjct: 140 IAGQTTGVAAGQRLVRRGIRTVRVQVKGLGPGRMTCVKGLTVAG 183
Score = 42.7 bits (96), Expect = 0.007
Identities = 18/39 (46%), Positives = 30/39 (76%)
Frame = -3
Query: 119 QGLGPGRLSAVKGLQMGGLNIVSITDNTHVSWNPPRXKE 3
+GLGPGR++ VKGL + G+++VSI+D+T + PR ++
Sbjct: 166 KGLGPGRMTCVKGLTVAGVHVVSISDHTPLCELGPRPRK 204
>UniRef50_P82912 Cluster: 28S ribosomal protein S11, mitochondrial
precursor; n=31; cellular organisms|Rep: 28S ribosomal
protein S11, mitochondrial precursor - Homo sapiens
(Human)
Length = 194
Score = 54.8 bits (126), Expect = 2e-06
Identities = 31/114 (27%), Positives = 48/114 (42%), Gaps = 2/114 (1%)
Frame = -2
Query: 396 TKQNLFPTL--ESDYQLYNGIPYKDLPICNIRVSHNNTIFTLTEPDGKVRIIRSCGMEGF 223
TK +++P + E + G ++++PI +I+ SHNNT + + SCG EGF
Sbjct: 58 TKFSIYPPIPGEESSLRWAGKKFEEIPIAHIKASHNNTQIQVVSASNEPLAFASCGTEGF 117
Query: 222 KNTKKGXXXXXXXXXXXXXTKAVVQGYNTXXXXXXRLGTRAIVCSQRLTNGGFE 61
+N KKG +A +G LG + L GG E
Sbjct: 118 RNAKKGTGIAAQTAGIAAAARAKQKGVIHIRVVVKGLGPGRLSAMHGLIMGGLE 171
Score = 50.8 bits (116), Expect = 3e-05
Identities = 23/39 (58%), Positives = 30/39 (76%)
Frame = -3
Query: 119 QGLGPGRLSAVKGLQMGGLNIVSITDNTHVSWNPPRXKE 3
+GLGPGRLSA+ GL MGGL ++SITDNT + N R ++
Sbjct: 152 KGLGPGRLSAMHGLIMGGLEVISITDNTPIPHNGCRPRK 190
>UniRef50_P46746 Cluster: Mitochondrial ribosomal protein S11; n=1;
Prototheca wickerhamii|Rep: Mitochondrial ribosomal
protein S11 - Prototheca wickerhamii
Length = 128
Score = 46.0 bits (104), Expect = 8e-04
Identities = 23/71 (32%), Positives = 34/71 (47%)
Frame = -2
Query: 321 ICNIRVSHNNTIFTLTEPDGKVRIIRSCGMEGFKNTKKGXXXXXXXXXXXXXTKAVVQGY 142
I +I+ + NNT+ TLT+ +G + S G GFKN++K +KA +GY
Sbjct: 19 IVHIQSTTNNTLITLTDLEGNTQFFVSAGTLGFKNSRKSTVYASGAAAEALASKAFNEGY 78
Query: 141 NTXXXXXXRLG 109
T LG
Sbjct: 79 RTIIVKIKGLG 89
>UniRef50_Q5DCW6 Cluster: SJCHGC02467 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC02467 protein - Schistosoma
japonicum (Blood fluke)
Length = 185
Score = 41.9 bits (94), Expect = 0.013
Identities = 19/43 (44%), Positives = 28/43 (65%)
Frame = -2
Query: 336 YKDLPICNIRVSHNNTIFTLTEPDGKVRIIRSCGMEGFKNTKK 208
Y ++PI ++ NN I TLT+ +G+V SCG EGF+N +K
Sbjct: 70 YYEIPILHLISRKNNLIATLTDCNGRVLNGTSCGAEGFRNARK 112
Score = 37.1 bits (82), Expect = 0.37
Identities = 16/32 (50%), Positives = 24/32 (75%)
Frame = -3
Query: 119 QGLGPGRLSAVKGLQMGGLNIVSITDNTHVSW 24
+G G +LSA+ GL + GL IVS+TD+T+V +
Sbjct: 142 RGKGSDKLSALSGLNISGLKIVSLTDDTNVHY 173
>UniRef50_A2QQ89 Cluster: Contig An08c0050, complete genome; n=6;
Eurotiomycetidae|Rep: Contig An08c0050, complete genome
- Aspergillus niger
Length = 235
Score = 40.3 bits (90), Expect = 0.039
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Frame = -2
Query: 438 VQGEKIIDLDSALKTKQNLFPTLESDYQLYNGIPYKDL-PICNIRV--SHNNTIFTLTEP 268
+QGEK+ + + +LE++ L N PY D P ++ V +NTI TLT P
Sbjct: 77 MQGEKVRSNQGVSRDYSRMAESLEAE--LINQ-PYADRSPPYHLHVYCHKHNTILTLTRP 133
Query: 267 DGKVRIIRSCGMEGFKNTKK 208
+G + +SCG GF+ +K+
Sbjct: 134 NGDPMLAKSCGHLGFRKSKR 153
>UniRef50_P27419 Cluster: Chloroplast 30S ribosomal protein S11;
n=1; Euglena gracilis|Rep: Chloroplast 30S ribosomal
protein S11 - Euglena gracilis
Length = 129
Score = 39.9 bits (89), Expect = 0.052
Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
Frame = -2
Query: 321 ICNIRVSHNNTIFTLTEPDGKVRIIRSCGMEGFKNTKKGXXXXXXXXXXXXXTKAVVQGY 142
I +I+ ++NN + ++++P G V S G GFK++KK KA+ QG
Sbjct: 20 IVHIKTTYNNVLVSVSDPKGNVIAWSSSGACGFKSSKKATPLATKTTTAIAVKKAIEQGL 79
Query: 141 NTXXXXXXRLGT---RAIVCSQRL 79
GT A+ C Q L
Sbjct: 80 QKVEINISGPGTGRETALKCVQSL 103
>UniRef50_A6YE90 Cluster: Ribosomal protein S11; n=5; cellular
organisms|Rep: Ribosomal protein S11 - Chlorokybus
atmophyticus (Soil alga)
Length = 262
Score = 39.5 bits (88), Expect = 0.069
Identities = 19/39 (48%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Frame = -3
Query: 119 QGLGPGRLSAVKGLQMGGLNIVSITDNT---HVSWNPPR 12
+G GPGR S+++GLQ+GGL I I D T H PP+
Sbjct: 220 RGFGPGRDSSLRGLQIGGLKIYKIQDTTPLPHNGCRPPK 258
Score = 36.7 bits (81), Expect = 0.49
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = -2
Query: 327 LPICNIRVSHNNTIFTLTEPDGKVRIIRSCGMEGFKNTKKGXXXXXXXXXXXXXTKAVVQ 148
L + +I+ + NNTI T+T+ DG + S G GFK +++ K++
Sbjct: 151 LGVAHIQTTLNNTIITITDLDGNTKSWSSSGSIGFKGSRRKTSYAAQAAAETAAKKSIQL 210
Query: 147 G 145
G
Sbjct: 211 G 211
>UniRef50_Q1IS96 Cluster: 30S ribosomal protein S11; n=274; cellular
organisms|Rep: 30S ribosomal protein S11 - Acidobacteria
bacterium (strain Ellin345)
Length = 142
Score = 38.3 bits (85), Expect = 0.16
Identities = 16/39 (41%), Positives = 26/39 (66%)
Frame = -2
Query: 321 ICNIRVSHNNTIFTLTEPDGKVRIIRSCGMEGFKNTKKG 205
+ +I+ S NNTI T+++P G V +S G GF+ ++KG
Sbjct: 33 LAHIQASFNNTIVTISDPSGNVVSWKSSGSLGFRGSRKG 71
>UniRef50_Q12G79 Cluster: 30S ribosomal protein S11; n=186; cellular
organisms|Rep: 30S ribosomal protein S11 - Polaromonas
sp. (strain JS666 / ATCC BAA-500)
Length = 134
Score = 36.7 bits (81), Expect = 0.49
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = -2
Query: 321 ICNIRVSHNNTIFTLTEPDGKVRIIRSCGMEGFKNTKKGXXXXXXXXXXXXXTKAVVQG 145
I ++ S NNTI T+T+ G S G +GFK ++K A+ QG
Sbjct: 25 IAHVHASFNNTIITITDRQGNALSWASSGGQGFKGSRKSTPFAAQVASEVAGRAAIEQG 83
>UniRef50_Q98Q07 Cluster: 30S ribosomal protein S11; n=33;
Bacteria|Rep: 30S ribosomal protein S11 - Mycoplasma
pulmonis
Length = 136
Score = 36.3 bits (80), Expect = 0.64
Identities = 22/89 (24%), Positives = 32/89 (35%)
Frame = -2
Query: 321 ICNIRVSHNNTIFTLTEPDGKVRIIRSCGMEGFKNTKKGXXXXXXXXXXXXXTKAVVQGY 142
+ +I +HNNTI T ++ G V S G G+K TKK KA G
Sbjct: 22 VAHIHSTHNNTIVTFSDEKGNVISWASSGTIGYKGTKKKTAYAAGLAAQNASEKAKEHGI 81
Query: 141 NTXXXXXXRLGTRAIVCSQRLTNGGFEYS 55
+G +++ G S
Sbjct: 82 REVSVRVKGIGQGRDAARKQIEVSGISVS 110
>UniRef50_A6BM57 Cluster: Ribosomal protein S11; n=1; Gnetum
parvifolium|Rep: Ribosomal protein S11 - Gnetum
parvifolium
Length = 132
Score = 35.9 bits (79), Expect = 0.85
Identities = 21/42 (50%), Positives = 23/42 (54%)
Frame = -2
Query: 330 DLPICNIRVSHNNTIFTLTEPDGKVRIIRSCGMEGFKNTKKG 205
D I +IR S NNTI T+T G V S G GFK KKG
Sbjct: 23 DKGIIHIRASFNNTIITVTNVLGCVISWSSAGACGFKGPKKG 64
>UniRef50_P56802 Cluster: Chloroplast 30S ribosomal protein S11;
n=85; Tracheophyta|Rep: Chloroplast 30S ribosomal
protein S11 - Arabidopsis thaliana (Mouse-ear cress)
Length = 138
Score = 35.9 bits (79), Expect = 0.85
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = -2
Query: 321 ICNIRVSHNNTIFTLTEPDGKVRIIRSCGMEGFKNTKKGXXXXXXXXXXXXXTKAVVQG 145
+ +++ S NNTI T+T+ G+V S G GF+ T++G V QG
Sbjct: 29 VIHVQASFNNTIVTVTDVRGRVISWSSAGTCGFRGTRRGTPFAAQTAAGNAIRAVVDQG 87
>UniRef50_Q9TLV1 Cluster: Chloroplast 30S ribosomal protein S11;
n=10; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S11 - Cyanidium caldarium
Length = 129
Score = 35.5 bits (78), Expect = 1.1
Identities = 19/36 (52%), Positives = 21/36 (58%)
Frame = -2
Query: 312 IRVSHNNTIFTLTEPDGKVRIIRSCGMEGFKNTKKG 205
I + NNTI T T+ GKV S G EGFK KKG
Sbjct: 23 INSTFNNTIVTATDCYGKVIAWASGGTEGFKGAKKG 58
>UniRef50_Q5A3W6 Cluster: Potential spliceosomal U4/U6 snRNP protein
Prp4p; n=1; Candida albicans|Rep: Potential spliceosomal
U4/U6 snRNP protein Prp4p - Candida albicans (Yeast)
Length = 458
Score = 34.7 bits (76), Expect = 2.0
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = -2
Query: 402 LKTKQNLFPTLESDYQLYNG--IPYKDLPICNIRVSHNNTIFTLTEPDGKVRIIRSCGME 229
LK+++ L L S Y++Y IP I NI++S+N+ DG + ++ S +
Sbjct: 86 LKSRRQLNSNL-SKYEIYGSQFIPGTTRTISNIKISNNDKYIACGSWDGSINLLNSQDLS 144
Query: 228 GFKNTKKG 205
FK T G
Sbjct: 145 IFKKTPSG 152
>UniRef50_Q9TCB8 Cluster: Ribosomal protein S11; n=1; Nephroselmis
olivacea|Rep: Ribosomal protein S11 - Nephroselmis
olivacea
Length = 128
Score = 34.3 bits (75), Expect = 2.6
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = -3
Query: 119 QGLGPGRLSAVKGLQMGGLNIVSITDNTHVSWN 21
+GLG GR S+++GL++GGL I I D T + N
Sbjct: 86 KGLGNGRRSSLRGLKLGGLKIRKIQDITPLPHN 118
>UniRef50_Q6SGQ1 Cluster: Putative uncharacterized protein; n=1;
uncultured bacterium 463|Rep: Putative uncharacterized
protein - uncultured bacterium 463
Length = 506
Score = 33.9 bits (74), Expect = 3.4
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = -2
Query: 537 RASVTSVVRLFQTSTPQATEKFVHKRIPAPDEG-VQGEKIIDLDSALKTKQNLFP-TLES 364
RA++ RL + +ATEK + + PD+G V E+I L LK L P TL S
Sbjct: 382 RAAMLQPDRLSDVAVAEATEKLLTYAVTIPDQGPVLKEQIATLQVLLKQANTLVPLTLRS 441
Query: 363 D 361
D
Sbjct: 442 D 442
>UniRef50_P04969 Cluster: 30S ribosomal protein S11; n=155; cellular
organisms|Rep: 30S ribosomal protein S11 - Bacillus
subtilis
Length = 131
Score = 33.9 bits (74), Expect = 3.4
Identities = 21/87 (24%), Positives = 32/87 (36%)
Frame = -2
Query: 321 ICNIRVSHNNTIFTLTEPDGKVRIIRSCGMEGFKNTKKGXXXXXXXXXXXXXTKAVVQGY 142
I +IR + NNTI T+T+ G S G GF+ ++K ++ G
Sbjct: 22 IAHIRSTFNNTIVTITDTHGNAISWSSAGALGFRGSRKSTPFAAQMAAETAAKGSIEHGL 81
Query: 141 NTXXXXXXRLGTRAIVCSQRLTNGGFE 61
T G+ + L G E
Sbjct: 82 KTLEVTVKGPGSGREAAIRALQAAGLE 108
>UniRef50_P30059 Cluster: Plastid 30S ribosomal protein S11; n=4;
Streptophyta|Rep: Plastid 30S ribosomal protein S11 -
Epifagus virginiana (Beechdrops)
Length = 136
Score = 33.9 bits (74), Expect = 3.4
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = -2
Query: 321 ICNIRVSHNNTIFTLTEPDGKVRIIRSCGMEGFKNTKKG 205
+ +++ S NNTI +T+ G+V S G GFK T++G
Sbjct: 29 VIHVQTSFNNTIVAVTDIKGRVVSWSSAGTCGFKGTRRG 67
>UniRef50_Q5ZRS8 Cluster: DnaA-like family protein; n=4; Legionella
pneumophila|Rep: DnaA-like family protein - Legionella
pneumophila subsp. pneumophila (strain Philadelphia 1
/ATCC 33152 / DSM 7513)
Length = 245
Score = 33.5 bits (73), Expect = 4.5
Identities = 21/80 (26%), Positives = 34/80 (42%)
Frame = +1
Query: 394 RLQSRIKINDLLSLDSFVWSRNTFMNKLFSSLRRTRLEQSHYACN*SPSSAGRIHLNSL* 573
+L IK+ND +LD F W NT + + + + ++ Y P +G+ HL
Sbjct: 19 QLALAIKLNDEATLDDFNWGNNTLLQQQLIEMLSFKADRLLYLW--GPKGSGKSHLLQAC 76
Query: 574 *VVLNTYWPSFYTRAAFXAE 633
+N + Y AF E
Sbjct: 77 CQAINLTQSAIYLPLAFLKE 96
>UniRef50_Q0QIP5 Cluster: Ribosomal protein S11; n=1;
Oltmannsiellopsis viridis|Rep: Ribosomal protein S11 -
Oltmannsiellopsis viridis (Marine flagellate)
Length = 194
Score = 33.5 bits (73), Expect = 4.5
Identities = 21/99 (21%), Positives = 37/99 (37%), Gaps = 1/99 (1%)
Frame = -2
Query: 354 LYNGIPYKDLP-ICNIRVSHNNTIFTLTEPDGKVRIIRSCGMEGFKNTKKGXXXXXXXXX 178
++N + YK + +++ + NNTI LT GKV+ + S G G ++
Sbjct: 73 IWNLVSYKKADAVLHLKKTRNNTIIALTNKIGKVKSVLSAGCLGLTGPRRATVYAGERVC 132
Query: 177 XXXXTKAVVQGYNTXXXXXXRLGTRAIVCSQRLTNGGFE 61
A+ GY G C + + G +
Sbjct: 133 EQMAKLALKMGYKRVIVKTRGTGYGRSQCVKAIAKTGLK 171
>UniRef50_Q7R835 Cluster: Putative uncharacterized protein PY07388;
n=1; Plasmodium yoelii yoelii|Rep: Putative
uncharacterized protein PY07388 - Plasmodium yoelii
yoelii
Length = 197
Score = 33.5 bits (73), Expect = 4.5
Identities = 20/54 (37%), Positives = 31/54 (57%)
Frame = -2
Query: 438 VQGEKIIDLDSALKTKQNLFPTLESDYQLYNGIPYKDLPICNIRVSHNNTIFTL 277
V E IID+D + +NLF TL D ++YN I D + N+ ++++IF L
Sbjct: 39 VLNEPIIDIDFS----ENLFHTLLFDLEIYNNIYTLDETLLNLEKLNHSSIFKL 88
>UniRef50_Q9PQN5 Cluster: 30S ribosomal protein S11; n=1; Ureaplasma
parvum|Rep: 30S ribosomal protein S11 - Ureaplasma
parvum (Ureaplasma urealyticum biotype 1)
Length = 121
Score = 33.5 bits (73), Expect = 4.5
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = -2
Query: 321 ICNIRVSHNNTIFTLTEPDGKVRIIRSCGMEGFKNTKK 208
I I + NNTI TL + G V S G G+K TKK
Sbjct: 13 IAYIHATKNNTIITLADEQGSVLSWASSGSIGYKGTKK 50
>UniRef50_Q49081 Cluster: 30S ribosomal protein; n=1; Mycoplasma
capricolum|Rep: 30S ribosomal protein - Mycoplasma
capricolum
Length = 80
Score = 33.1 bits (72), Expect = 6.0
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = -2
Query: 333 KDLP--ICNIRVSHNNTIFTLTEPDGKVRIIRSCGMEGFKNTKK 208
K++P I +I + NNTI T+++ G V S G GFK +KK
Sbjct: 6 KNIPKGIAHIHSTFNNTIVTVSDEKGNVLSWSSAGAIGFKGSKK 49
>UniRef50_Q9G885 Cluster: Ribosomal protein S11; n=1; Malawimonas
jakobiformis|Rep: Ribosomal protein S11 - Malawimonas
jakobiformis
Length = 134
Score = 33.1 bits (72), Expect = 6.0
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = -2
Query: 336 YKDLPICNIRV--SHNNTIFTLTEPDGKVRIIRSCGMEGFKNTKK 208
YK IC + V + NNT TLT G + S G GFK K+
Sbjct: 18 YKKYKICKLFVKKTQNNTFVTLTNIKGNTLVYYSTGKLGFKGAKR 62
>UniRef50_Q05FK3 Cluster: 30S ribosomal protein S11; n=2; cellular
organisms|Rep: 30S ribosomal protein S11 - Carsonella
ruddii (strain PV)
Length = 118
Score = 33.1 bits (72), Expect = 6.0
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = -2
Query: 336 YKDLPICNIRVSHNNTIFTLTEPDGKVRIIRSCGMEGFKNTKK 208
YK I I + NNTI TLT+ G + S G+ G+K KK
Sbjct: 4 YKKRGIIYIHSTFNNTISTLTDVFGNTIVWYSAGILGYKGPKK 46
>UniRef50_P59375 Cluster: 30S ribosomal protein S11; n=85; cellular
organisms|Rep: 30S ribosomal protein S11 - Shewanella
oneidensis
Length = 130
Score = 32.7 bits (71), Expect = 7.9
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Frame = -3
Query: 119 QGLGPGRLSAVKGLQMGGLNIVSITDNTHVSWN---PPRXK 6
+G GPGR SA++ L G I +ITD T + N PP+ +
Sbjct: 88 KGPGPGRESAIRALNAVGYKITNITDVTPIPHNGCRPPKKR 128
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 568,023,423
Number of Sequences: 1657284
Number of extensions: 9634634
Number of successful extensions: 21955
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 21254
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21942
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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