Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_P05
         (655 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ062760-1|AAY56633.1|  200|Drosophila melanogaster mitochondria...   116   2e-26
AY095194-1|AAM12287.1|  200|Drosophila melanogaster RE01527p pro...   116   2e-26
AE014297-2304|AAF55385.1|  200|Drosophila melanogaster CG5184-PA...   116   2e-26
AY089696-1|AAL90434.1|  178|Drosophila melanogaster RH70248p pro...    78   9e-15
BT023950-1|ABB36454.1|  654|Drosophila melanogaster GH10459p pro...    29   7.3  
AE014297-2305|AAN13731.1|   91|Drosophila melanogaster CG5184-PB...    29   7.3  
AE014297-1645|AAF54919.1|  654|Drosophila melanogaster CG8449-PA...    29   7.3  

>DQ062760-1|AAY56633.1|  200|Drosophila melanogaster mitochondrial
           ribosomal proteinS11 protein.
          Length = 200

 Score =  116 bits (280), Expect = 2e-26
 Identities = 56/131 (42%), Positives = 76/131 (58%)
 Frame = -2

Query: 459 IPAPDEGVQGEKIIDLDSALKTKQNLFPTLESDYQLYNGIPYKDLPICNIRVSHNNTIFT 280
           +PA DEG  GEK +D+D+ +  K   FP   +   L+NGIP+ +LPICNIRVS NNTI +
Sbjct: 45  LPAKDEGTVGEKTVDIDTLINRKAKFFPDASTANTLFNGIPFNELPICNIRVSPNNTIIS 104

Query: 279 LTEPDGKVRIIRSCGMEGFKNTKKGXXXXXXXXXXXXXTKAVVQGYNTXXXXXXRLGTRA 100
           +T+  G +R+IRSCG+EGFKNT+KG              KA+  G+ T       LG   
Sbjct: 105 VTDHKGVLRLIRSCGIEGFKNTRKGTNIAAQATAVTISGKAIELGWKTVRVKVRGLGPGR 164

Query: 99  IVCSQRLTNGG 67
           +   + L  GG
Sbjct: 165 MSAIKGLQMGG 175



 Score = 75.4 bits (177), Expect = 6e-14
 Identities = 32/39 (82%), Positives = 38/39 (97%)
 Frame = -3

Query: 119 QGLGPGRLSAVKGLQMGGLNIVSITDNTHVSWNPPRXKE 3
           +GLGPGR+SA+KGLQMGGLNIVSITDNTHVS+NPPR ++
Sbjct: 158 RGLGPGRMSAIKGLQMGGLNIVSITDNTHVSFNPPRPRK 196


>AY095194-1|AAM12287.1|  200|Drosophila melanogaster RE01527p
           protein.
          Length = 200

 Score =  116 bits (280), Expect = 2e-26
 Identities = 56/131 (42%), Positives = 76/131 (58%)
 Frame = -2

Query: 459 IPAPDEGVQGEKIIDLDSALKTKQNLFPTLESDYQLYNGIPYKDLPICNIRVSHNNTIFT 280
           +PA DEG  GEK +D+D+ +  K   FP   +   L+NGIP+ +LPICNIRVS NNTI +
Sbjct: 45  LPAKDEGTVGEKTVDIDTLINRKAKFFPDASTANTLFNGIPFNELPICNIRVSPNNTIIS 104

Query: 279 LTEPDGKVRIIRSCGMEGFKNTKKGXXXXXXXXXXXXXTKAVVQGYNTXXXXXXRLGTRA 100
           +T+  G +R+IRSCG+EGFKNT+KG              KA+  G+ T       LG   
Sbjct: 105 VTDHKGVLRLIRSCGIEGFKNTRKGTNIAAQATAVTISGKAIELGWKTVRVKVRGLGPGR 164

Query: 99  IVCSQRLTNGG 67
           +   + L  GG
Sbjct: 165 MSAIKGLQMGG 175



 Score = 75.4 bits (177), Expect = 6e-14
 Identities = 32/39 (82%), Positives = 38/39 (97%)
 Frame = -3

Query: 119 QGLGPGRLSAVKGLQMGGLNIVSITDNTHVSWNPPRXKE 3
           +GLGPGR+SA+KGLQMGGLNIVSITDNTHVS+NPPR ++
Sbjct: 158 RGLGPGRMSAIKGLQMGGLNIVSITDNTHVSFNPPRPRK 196


>AE014297-2304|AAF55385.1|  200|Drosophila melanogaster CG5184-PA,
           isoform A protein.
          Length = 200

 Score =  116 bits (280), Expect = 2e-26
 Identities = 56/131 (42%), Positives = 76/131 (58%)
 Frame = -2

Query: 459 IPAPDEGVQGEKIIDLDSALKTKQNLFPTLESDYQLYNGIPYKDLPICNIRVSHNNTIFT 280
           +PA DEG  GEK +D+D+ +  K   FP   +   L+NGIP+ +LPICNIRVS NNTI +
Sbjct: 45  LPAKDEGTVGEKTVDIDTLINRKAKFFPDASTANTLFNGIPFNELPICNIRVSPNNTIIS 104

Query: 279 LTEPDGKVRIIRSCGMEGFKNTKKGXXXXXXXXXXXXXTKAVVQGYNTXXXXXXRLGTRA 100
           +T+  G +R+IRSCG+EGFKNT+KG              KA+  G+ T       LG   
Sbjct: 105 VTDHKGVLRLIRSCGIEGFKNTRKGTNIAAQATAVTISGKAIELGWKTVRVKVRGLGPGR 164

Query: 99  IVCSQRLTNGG 67
           +   + L  GG
Sbjct: 165 MSAIKGLQMGG 175



 Score = 75.4 bits (177), Expect = 6e-14
 Identities = 32/39 (82%), Positives = 38/39 (97%)
 Frame = -3

Query: 119 QGLGPGRLSAVKGLQMGGLNIVSITDNTHVSWNPPRXKE 3
           +GLGPGR+SA+KGLQMGGLNIVSITDNTHVS+NPPR ++
Sbjct: 158 RGLGPGRMSAIKGLQMGGLNIVSITDNTHVSFNPPRPRK 196


>AY089696-1|AAL90434.1|  178|Drosophila melanogaster RH70248p
           protein.
          Length = 178

 Score = 78.2 bits (184), Expect = 9e-15
 Identities = 48/131 (36%), Positives = 65/131 (49%)
 Frame = -2

Query: 459 IPAPDEGVQGEKIIDLDSALKTKQNLFPTLESDYQLYNGIPYKDLPICNIRVSHNNTIFT 280
           +PA DEG  GEK +D+D+ +                       +LPICNIRVS NNTI +
Sbjct: 45  LPAKDEGTVGEKTVDIDTLIN----------------------ELPICNIRVSPNNTIIS 82

Query: 279 LTEPDGKVRIIRSCGMEGFKNTKKGXXXXXXXXXXXXXTKAVVQGYNTXXXXXXRLGTRA 100
           +T+  G +R+IRSCG+EGFKNT+KG              KA+  G+ T       LG   
Sbjct: 83  VTDHKGVLRLIRSCGIEGFKNTRKGTNIAAQATAVTISGKAIELGWKTVRVKVRGLGPGR 142

Query: 99  IVCSQRLTNGG 67
           +   + L  GG
Sbjct: 143 MSAIKGLQMGG 153



 Score = 75.4 bits (177), Expect = 6e-14
 Identities = 32/39 (82%), Positives = 38/39 (97%)
 Frame = -3

Query: 119 QGLGPGRLSAVKGLQMGGLNIVSITDNTHVSWNPPRXKE 3
           +GLGPGR+SA+KGLQMGGLNIVSITDNTHVS+NPPR ++
Sbjct: 136 RGLGPGRMSAIKGLQMGGLNIVSITDNTHVSFNPPRPRK 174


>BT023950-1|ABB36454.1|  654|Drosophila melanogaster GH10459p
           protein.
          Length = 654

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +3

Query: 54  NYIQTPHL*AFDCRQSPWSQALXLLLVQYY 143
           +Y++ PH  A DC   P SQ+   +  QY+
Sbjct: 112 DYVRNPHQLAVDCNDDPLSQSTQSVWNQYF 141


>AE014297-2305|AAN13731.1|   91|Drosophila melanogaster CG5184-PB,
           isoform B protein.
          Length = 91

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = -2

Query: 459 IPAPDEGVQGEKIIDLDSAL 400
           +PA DEG  GEK +D+D+ +
Sbjct: 45  LPAKDEGTVGEKTVDIDTLI 64


>AE014297-1645|AAF54919.1|  654|Drosophila melanogaster CG8449-PA
           protein.
          Length = 654

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +3

Query: 54  NYIQTPHL*AFDCRQSPWSQALXLLLVQYY 143
           +Y++ PH  A DC   P SQ+   +  QY+
Sbjct: 112 DYVRNPHQLAVDCNDDPLSQSTQSVWNQYF 141


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,386,027
Number of Sequences: 53049
Number of extensions: 443258
Number of successful extensions: 1036
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 976
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1032
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)