Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_P05
         (655 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75552-5|CAA99938.1|  208|Caenorhabditis elegans Hypothetical pr...    60   1e-09

>Z75552-5|CAA99938.1|  208|Caenorhabditis elegans Hypothetical
           protein W04D2.5 protein.
          Length = 208

 Score = 60.1 bits (139), Expect = 1e-09
 Identities = 33/104 (31%), Positives = 49/104 (47%)
 Frame = -2

Query: 378 PTLESDYQLYNGIPYKDLPICNIRVSHNNTIFTLTEPDGKVRIIRSCGMEGFKNTKKGXX 199
           PT E+  Q ++G+ Y +LP+  IR S NNT+ T+ +   +V    SC +EGFKN +K   
Sbjct: 80  PTAETLKQQFDGVAYHELPLVYIRASKNNTLVTVMDNKNEVITSTSCRLEGFKNARKKTT 139

Query: 198 XXXXXXXXXXXTKAVVQGYNTXXXXXXRLGTRAIVCSQRLTNGG 67
                       + V +G  T       LG   + C + LT  G
Sbjct: 140 IAGQTTGVAAGQRLVRRGIRTVRVQVKGLGPGRMTCVKGLTVAG 183



 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 18/39 (46%), Positives = 30/39 (76%)
 Frame = -3

Query: 119 QGLGPGRLSAVKGLQMGGLNIVSITDNTHVSWNPPRXKE 3
           +GLGPGR++ VKGL + G+++VSI+D+T +    PR ++
Sbjct: 166 KGLGPGRMTCVKGLTVAGVHVVSISDHTPLCELGPRPRK 204


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,070,054
Number of Sequences: 27780
Number of extensions: 232171
Number of successful extensions: 536
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 496
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 536
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)