Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_P03
         (635 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82287-1|CAB05316.1|  366|Caenorhabditis elegans Hypothetical pr...    29   3.7  
U97009-10|AAC69033.1|  533|Caenorhabditis elegans Udp-glucuronos...    28   4.9  
Z68219-5|CAJ43449.1|  343|Caenorhabditis elegans Hypothetical pr...    27   8.5  
Z68219-4|CAA92482.2|  359|Caenorhabditis elegans Hypothetical pr...    27   8.5  

>Z82287-1|CAB05316.1|  366|Caenorhabditis elegans Hypothetical
           protein ZK550.1 protein.
          Length = 366

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = -1

Query: 416 MCFLIRGFLYQLIYKSTGNV*ITGKQLLCFGKMRHVSSNI 297
           M +L     Y+ IY+ T N+  TG  ++  GK+  +SS I
Sbjct: 115 MAYLFLVHFYRWIYQETYNLGFTGSMMVAVGKITLLSSAI 154


>U97009-10|AAC69033.1|  533|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein11 protein.
          Length = 533

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +2

Query: 242 QRFKWLLDVFVYSAVSPALYLMKHVAF 322
           Q+ K LLDV     + P + LMKH+ F
Sbjct: 446 QKAKELLDVLTNQPIDPVMNLMKHLEF 472


>Z68219-5|CAJ43449.1|  343|Caenorhabditis elegans Hypothetical
           protein T05A1.5b protein.
          Length = 343

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 15/48 (31%), Positives = 20/48 (41%)
 Frame = +2

Query: 278 SAVSPALYLMKHVAFFQNITVACL*FIHYQSICRSIGIENHESESTLF 421
           +A +P   +M    FFQ      L  I++   C SI    H   S LF
Sbjct: 166 AAYAPTFEIMLIGRFFQGSCFTALTMINWVMCCESISFSGHGYASVLF 213


>Z68219-4|CAA92482.2|  359|Caenorhabditis elegans Hypothetical
           protein T05A1.5a protein.
          Length = 359

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 15/48 (31%), Positives = 20/48 (41%)
 Frame = +2

Query: 278 SAVSPALYLMKHVAFFQNITVACL*FIHYQSICRSIGIENHESESTLF 421
           +A +P   +M    FFQ      L  I++   C SI    H   S LF
Sbjct: 182 AAYAPTFEIMLIGRFFQGSCFTALTMINWVMCCESISFSGHGYASVLF 229


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,801,209
Number of Sequences: 27780
Number of extensions: 243625
Number of successful extensions: 538
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 533
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 538
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)