Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_P02
(737 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g65360.1 68418.m08221 histone H3 identical to histone H3 from... 219 2e-57
At5g10400.1 68418.m01206 histone H3 identical to several histone... 219 2e-57
At5g10390.1 68418.m01205 histone H3 identical to histone H3 from... 219 2e-57
At3g27360.1 68416.m03421 histone H3 identical to histone H3 from... 219 2e-57
At1g09200.1 68414.m01027 histone H3 identical to histone H3 from... 219 2e-57
At5g10980.1 68418.m01277 histone H3 identical to HISTONE H3.2, M... 218 4e-57
At4g40040.1 68417.m05668 histone H3.2 identical to Histone H3.2,... 218 4e-57
At4g40030.1 68417.m05667 histone H3.2 identical to Histone H3.2,... 218 4e-57
At1g75600.1 68414.m08784 histone H3.2, putative strong similarit... 216 1e-56
At5g65350.1 68418.m08220 histone H3 nearly identical to histone ... 214 6e-56
At1g13370.1 68414.m01554 histone H3, putative strong similarity ... 210 5e-55
At1g19890.1 68414.m02494 histone H3, putative similar to histone... 194 5e-50
At5g12910.1 68418.m01481 histone H3, putative similar to histone... 172 2e-43
At1g01370.1 68414.m00052 centromeric histone H3 HTR12 (HTR12) si... 110 1e-24
At5g66410.1 68418.m08376 expressed protein 30 1.8
At5g56280.1 68418.m07024 COP9 signalosome subunit 6 / CSN subuni... 28 7.4
At2g44210.1 68415.m05502 expressed protein Pfam profile PF03080... 28 7.4
At1g18350.1 68414.m02293 mitogen-activated protein kinase kinase... 28 7.4
At4g04570.1 68417.m00670 protein kinase family protein contains ... 27 9.8
>At5g65360.1 68418.m08221 histone H3 identical to histone H3 from
Zea mays SP|P05203, Medicago sativa GI:166384,
Encephalartos altensteinii SP|P08903, Pisum sativum
SP|P02300; contains Pfam profile PF00125 Core histone
H2A/H2B/H3/H4
Length = 136
Score = 219 bits (535), Expect = 2e-57
Identities = 105/112 (93%), Positives = 111/112 (99%)
Frame = -3
Query: 735 AARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLR 556
AARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLR
Sbjct: 25 AARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLR 84
Query: 555 FQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 400
FQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 85 FQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
>At5g10400.1 68418.m01206 histone H3 identical to several histone H3
proteins, including Zea mays SP|P05203, Medicago sativa
GI:166384, Encephalartos altensteinii SP|P08903, Pisum
sativum SP|P02300; contains Pfam profile PF00125 Core
histone H2A/H2B/H3/H4
Length = 136
Score = 219 bits (535), Expect = 2e-57
Identities = 105/112 (93%), Positives = 111/112 (99%)
Frame = -3
Query: 735 AARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLR 556
AARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLR
Sbjct: 25 AARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLR 84
Query: 555 FQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 400
FQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 85 FQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
>At5g10390.1 68418.m01205 histone H3 identical to histone H3 from
Zea mays SP|P05203, Medicago sativa GI:166384,
Encephalartos altensteinii SP|P08903, Pisum sativum
SP|P02300; contains Pfam profile PF00125 Core histone
H2A/H2B/H3/H4
Length = 136
Score = 219 bits (535), Expect = 2e-57
Identities = 105/112 (93%), Positives = 111/112 (99%)
Frame = -3
Query: 735 AARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLR 556
AARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLR
Sbjct: 25 AARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLR 84
Query: 555 FQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 400
FQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 85 FQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
>At3g27360.1 68416.m03421 histone H3 identical to histone H3 from
Zea mays SP|P05203, Medicago sativa GI:166384,
Encephalartos altensteinii SP|P08903, Pisum sativum
SP|P02300; contains Pfam profile PF00125 Core histone
H2A/H2B/H3/H4
Length = 136
Score = 219 bits (535), Expect = 2e-57
Identities = 105/112 (93%), Positives = 111/112 (99%)
Frame = -3
Query: 735 AARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLR 556
AARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLR
Sbjct: 25 AARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLR 84
Query: 555 FQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 400
FQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 85 FQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
>At1g09200.1 68414.m01027 histone H3 identical to histone H3 from
Zea mays SP|P05203, Medicago sativa GI:166384,
Encephalartos altensteinii SP|P08903, Pisum sativum
SP|P02300; contains Pfam profile PF00125 Core histone
H2A/H2B/H3/H4
Length = 136
Score = 219 bits (535), Expect = 2e-57
Identities = 105/112 (93%), Positives = 111/112 (99%)
Frame = -3
Query: 735 AARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLR 556
AARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLR
Sbjct: 25 AARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLR 84
Query: 555 FQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 400
FQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 85 FQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
>At5g10980.1 68418.m01277 histone H3 identical to HISTONE H3.2,
MINOR, Medicago sativa, SWISSPROT:P11105, histone H3
variant H3.3 Lycopersicon esculentum GI:1435157;
contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4
Length = 136
Score = 218 bits (532), Expect = 4e-57
Identities = 106/112 (94%), Positives = 110/112 (98%)
Frame = -3
Query: 735 AARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLR 556
AARKSAP+TGGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLR
Sbjct: 25 AARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLR 84
Query: 555 FQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 400
FQS A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 85 FQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
>At4g40040.1 68417.m05668 histone H3.2 identical to Histone H3.2,
minor Lolium temulentum SP|P11105, nearly identical to
histone H3.2 Mus pahari GI:515005; contains Pfam profile
PF00125 Core histone H2A/H2B/H3/H4
Length = 136
Score = 218 bits (532), Expect = 4e-57
Identities = 106/112 (94%), Positives = 110/112 (98%)
Frame = -3
Query: 735 AARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLR 556
AARKSAP+TGGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLR
Sbjct: 25 AARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLR 84
Query: 555 FQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 400
FQS A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 85 FQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
>At4g40030.1 68417.m05667 histone H3.2 identical to Histone H3.2,
minor Lolium temulentum SP|P11105, nearly identical to
histone H3.2 Mus pahari GI:515005; contains Pfam profile
PF00125 Core histone H2A/H2B/H3/H4
Length = 136
Score = 218 bits (532), Expect = 4e-57
Identities = 106/112 (94%), Positives = 110/112 (98%)
Frame = -3
Query: 735 AARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLR 556
AARKSAP+TGGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLR
Sbjct: 25 AARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLR 84
Query: 555 FQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 400
FQS A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 85 FQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
>At1g75600.1 68414.m08784 histone H3.2, putative strong similarity
to histone H3.2 SP|P11105 GI:417103 from Lolium
temulentum, histone H3.2 from Mus pahari GI:515005;
contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4
Length = 136
Score = 216 bits (528), Expect = 1e-56
Identities = 104/112 (92%), Positives = 110/112 (98%)
Frame = -3
Query: 735 AARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLR 556
AARKSAP+TGGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQD+KTDLR
Sbjct: 25 AARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDYKTDLR 84
Query: 555 FQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 400
FQS A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKD+QLARRIRGERA
Sbjct: 85 FQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDVQLARRIRGERA 136
>At5g65350.1 68418.m08220 histone H3 nearly identical to histone H3
from Zea mays SP|P05203, Medicago sativa GI:166384,
Encephalartos altensteinii SP|P08903, Pisum sativum
SP|P02300; contains Pfam profile PF00125 Core histone
H2A/H2B/H3/H4
Length = 139
Score = 214 bits (522), Expect = 6e-56
Identities = 101/112 (90%), Positives = 111/112 (99%)
Frame = -3
Query: 735 AARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLR 556
AAR+SAP+TGGVKKPHR+RPGTVALR+IR+YQKSTE+LIRKLPFQRLVREIAQDFKTDLR
Sbjct: 25 AARQSAPATGGVKKPHRFRPGTVALRDIRKYQKSTEILIRKLPFQRLVREIAQDFKTDLR 84
Query: 555 FQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 400
FQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPK+IQLARRIRGERA
Sbjct: 85 FQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKEIQLARRIRGERA 136
>At1g13370.1 68414.m01554 histone H3, putative strong similarity to
Histone H3.2, minor Medicago sativa SP|P11105, histone
H3 Rubus idaeus GI:10732809; contains Pfam profile
PF00125 Core histone H2A/H2B/H3/H4
Length = 136
Score = 210 bits (514), Expect = 5e-55
Identities = 102/112 (91%), Positives = 108/112 (96%)
Frame = -3
Query: 735 AARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLR 556
AARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTELL RKLPFQRLVREIAQDFKTDLR
Sbjct: 25 AARKSAPTTGGVKKPHRFRPGTVALREIRKYQKSTELLNRKLPFQRLVREIAQDFKTDLR 84
Query: 555 FQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 400
FQS A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKD+QLARRIR ERA
Sbjct: 85 FQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDVQLARRIRAERA 136
>At1g19890.1 68414.m02494 histone H3, putative similar to histone H3
from Chlamydomonas reinhardtii GI:571470, Volvox carteri
SP|P08437, histone H3.2 minor from Lolium temulentum
SP|P11105; contains Pfam profile PF00125 Core histone
H2A/H2B/H3/H4
Length = 137
Score = 194 bits (473), Expect = 5e-50
Identities = 97/113 (85%), Positives = 104/113 (92%), Gaps = 1/113 (0%)
Frame = -3
Query: 735 AARKSA-PSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDL 559
AARK+ P GGVK+ HR+RPGTVALREIR+YQKST+LLIRKLPFQRLVREIAQDFK DL
Sbjct: 25 AARKTRRPYRGGVKRAHRFRPGTVALREIRKYQKSTDLLIRKLPFQRLVREIAQDFKVDL 84
Query: 558 RFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 400
RFQS A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIM KDIQLARRIRGERA
Sbjct: 85 RFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMSKDIQLARRIRGERA 137
>At5g12910.1 68418.m01481 histone H3, putative similar to histone H3
from Mus musculus GI:51301, Gallus gallus GI:211859,
Medicago sativa GI:166384, Pisum sativum SP|P02300;
contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4
Length = 131
Score = 172 bits (419), Expect = 2e-43
Identities = 78/104 (75%), Positives = 96/104 (92%)
Frame = -3
Query: 714 STGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIG 535
ST +KKP+RY+PGTVALREIR+YQK+T+L+IRKLPFQRLV+EIAQ K DLRFQ+ A+
Sbjct: 27 STPPLKKPYRYKPGTVALREIRKYQKTTDLVIRKLPFQRLVKEIAQSLKADLRFQTGAVS 86
Query: 534 ALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 403
ALQEA+EA++VG+FEDTNLCA+HAKR TIMPKDIQLA+R+RG+R
Sbjct: 87 ALQEAAEAFMVGMFEDTNLCAMHAKRSTIMPKDIQLAKRLRGDR 130
>At1g01370.1 68414.m00052 centromeric histone H3 HTR12 (HTR12)
similar to histone H3 GB:X17141 GI:10795 from
Tetrahymena pyriformis, GI:161790 from Tetrahymena
thermophila; contains Pfam profile PF00125 Core histone
H2A/H2B/H3/H4
Length = 178
Score = 110 bits (264), Expect = 1e-24
Identities = 59/109 (54%), Positives = 73/109 (66%), Gaps = 2/109 (1%)
Frame = -3
Query: 726 KSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDL--RF 553
+ A G KK +RYRPGTVAL+EIR +QK T LLI F R VR I R+
Sbjct: 66 RQAMPRGSQKKSYRYRPGTVALKEIRHFQKQTNLLIPAASFIREVRSITHMLAPPQINRW 125
Query: 552 QSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 406
+ A+ ALQEA+E YLVGLF D+ LCAIHA+RVT+M KD +LARR+ G+
Sbjct: 126 TAEALVALQEAAEDYLVGLFSDSMLCAIHARRVTLMRKDFELARRLGGK 174
>At5g66410.1 68418.m08376 expressed protein
Length = 230
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/64 (23%), Positives = 31/64 (48%)
Frame = -3
Query: 621 IRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMP 442
+ L F ++ A+D+K ++ A G+ E L L +D L +HA R+ +
Sbjct: 10 LSNLAFGNVLAAAARDYKKEVLANEKAQGSRPVNEEVDLDELMDDPELEKLHADRIAALR 69
Query: 441 KDIQ 430
++++
Sbjct: 70 REVE 73
>At5g56280.1 68418.m07024 COP9 signalosome subunit 6 / CSN subunit 6
(CSN6A) identical to CSN complex subunit 6A [Arabidopsis
thaliana] GI:18056665, COP9 complex subunit 6
[Arabidopsis thaliana] GI:15809663; contains Pfam
profile PF01398: Mov34/MPN/PAD-1 family; identical to
cDNA CSN complex subunit 6A (CSN6A) GI:18056664
Length = 317
Score = 27.9 bits (59), Expect = 7.4
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Frame = +1
Query: 394 NLSTFTTDSSSKLN---ILRHDGHTFGVNSTQVGVFEQANEISLACLLESSDGGRLETQI 564
N+S T ++LN + GH G N+ + +F+Q N C++ G +E
Sbjct: 20 NISDHYTRVKTQLNPPASICASGH--GSNNGEA-MFQQ-NPRVYGCVIGVQRGRTVEIFN 75
Query: 565 SFEILSDFSHKTLERQLTDKQ 627
SFE+L D S +TL+R +K+
Sbjct: 76 SFELLYDPSTQTLDRSFLEKK 96
>At2g44210.1 68415.m05502 expressed protein Pfam profile PF03080:
Arabidopsis proteins of unknown function
Length = 415
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +1
Query: 358 YRITSNQNYN*TNLSTFTTDSSSKL-NILRHDGHTFGVNSTQVGVF 492
YR +S +NY N + SS+ N+L +GH + + GVF
Sbjct: 133 YRASSVENYGMKNQKSIPKPKSSEPPNVLTQNGHQHAIMYVEDGVF 178
>At1g18350.1 68414.m02293 mitogen-activated protein kinase kinase
(MAPKK), putative (MKK7) mitogen-activated protein
kinase kinase (MAPKK) family, PMID:12119167
Length = 307
Score = 27.9 bits (59), Expect = 7.4
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Frame = +1
Query: 406 FTTDSSSKLNILRHDGHTFGVNSTQVGVFEQANEISLACLLESSDGGRLET---QISFEI 576
FT + ++ ILR + V G+FE+ ++ L+E DGG LE+ ++ +
Sbjct: 84 FTRQLAREMEILRRTDSPYVVRCQ--GIFEKPIVGEVSILMEYMDGGNLESLRGAVTEKQ 141
Query: 577 LSDFSHKTLE 606
L+ FS + L+
Sbjct: 142 LAGFSRQILK 151
>At4g04570.1 68417.m00670 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 654
Score = 27.5 bits (58), Expect = 9.8
Identities = 20/68 (29%), Positives = 30/68 (44%)
Frame = +1
Query: 412 TDSSSKLNILRHDGHTFGVNSTQVGVFEQANEISLACLLESSDGGRLETQISFEILSDFS 591
TD S N L G FG + G F E+++ L + S G +E + +L+
Sbjct: 345 TDDFSSENTLGQGG--FG--TVYKGTFPNGQEVAVKRLTKGSGQGDMEFKNEVSLLTRLQ 400
Query: 592 HKTLERQL 615
HK L + L
Sbjct: 401 HKNLVKLL 408
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,751,020
Number of Sequences: 28952
Number of extensions: 270323
Number of successful extensions: 618
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 605
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 617
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1624036432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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