Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_O24
         (734 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.1  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    23   3.4  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   4.5  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   5.9  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   7.8  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -2

Query: 286  LXGFNEXQTMMYDRLINSPS 227
            L G+N+ Q   Y RL+N+P+
Sbjct: 1475 LGGWNDSQGDKYSRLVNNPA 1494



 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 286  LXGFNEXQTMMYDRLINSPS 227
            + G+N+     Y RL+N+PS
Sbjct: 1900 IGGWNDSAGDKYSRLVNNPS 1919



 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -2

Query: 286  LXGFNEXQTMMYDRLINSP 230
            L G+N+     Y RL+N P
Sbjct: 2398 LGGWNDSAGNKYSRLVNDP 2416


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/40 (25%), Positives = 22/40 (55%)
 Frame = +2

Query: 188 LLFNYPIEYVPIVAG*VYETIVHHSLXFIKTXQILLRKSA 307
           + F +P+  + IV   + +T++HH +    T  ++  +SA
Sbjct: 244 IFFIFPLAILIIVYILIAKTLMHHPVAMTGTKTVMPSQSA 283



 Score = 22.2 bits (45), Expect = 4.5
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = -2

Query: 511 TRTLNLSYNALKNVQKVAFSSNTTNNMDTTYMEIPLYD 398
           T T   + +AL +   + F+ +T+N + T    I LY+
Sbjct: 11  TTTTTTTSSALNSTPLIEFNISTSNYLYTPSSTIDLYN 48


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = -2

Query: 511 TRTLNLSYNALKNVQKVAFSSNTTNNMDTTYMEIPLYD 398
           T T   + +AL +   + F+ +T+N + T    I LY+
Sbjct: 11  TTTTTTTSSALNSTPLIEFNISTSNYLYTPSSTIDLYN 48


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +3

Query: 222 SLLGEFMRRSYIIVCXSLKPXKYFFAKVLSRRSFSNIPL 338
           +LL E + +SY     +LK       K+L++ SF  I L
Sbjct: 50  ALLQEIIPKSYFGTTTNLKRFYKVVEKILTQSSFECIHL 88


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = -1

Query: 701 TYLIRLTIGNLNELVILSKKEEGD 630
           T LIR  I NLN  +I S    GD
Sbjct: 184 TVLIRNKISNLNTSLIHSTHLNGD 207


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,075
Number of Sequences: 336
Number of extensions: 3218
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19675845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)