Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_O24
         (734 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC002331-1|AAH02331.1|  166|Homo sapiens chromosome 11 open read...   120   4e-27
AK000494-1|BAA91204.1|  166|Homo sapiens protein ( Homo sapiens ...   120   4e-27

>BC002331-1|AAH02331.1|  166|Homo sapiens chromosome 11 open reading
           frame 79 protein.
          Length = 166

 Score =  120 bits (290), Expect = 4e-27
 Identities = 59/120 (49%), Positives = 78/120 (65%), Gaps = 1/120 (0%)
 Frame = -2

Query: 451 SNTTNNMDTTYMEIPLYDVEKQQPLEKRKARLHYQSRKRGMLENDLLLSTFAKKYLXGFN 272
           S T +  D   + +P +     + +E ++ARL Y+SRKRGMLEN +LLS FAK++L    
Sbjct: 39  SPTDSQKDMIEIPLPPWQERTDESIETKRARLLYESRKRGMLENCILLSLFAKEHLQHMT 98

Query: 271 EXQTMMYDRLINSPSNDWDIFYWIVEKKPTRXEFDNEIMNLLXXHAKNED-QIALRQPDL 95
           E Q  +YDRLIN PSNDWDI+YW  E KP    F+NE+M LL   AKN++ +  LR PDL
Sbjct: 99  EKQLNLYDRLINEPSNDWDIYYWATEAKPAPEIFENEVMALLRDFAKNKNKEQRLRAPDL 158


>AK000494-1|BAA91204.1|  166|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20487 fis, clone KAT08245. ).
          Length = 166

 Score =  120 bits (290), Expect = 4e-27
 Identities = 59/120 (49%), Positives = 78/120 (65%), Gaps = 1/120 (0%)
 Frame = -2

Query: 451 SNTTNNMDTTYMEIPLYDVEKQQPLEKRKARLHYQSRKRGMLENDLLLSTFAKKYLXGFN 272
           S T +  D   + +P +     + +E ++ARL Y+SRKRGMLEN +LLS FAK++L    
Sbjct: 39  SPTDSQKDMIEIPLPPWQERTDESIETKRARLLYESRKRGMLENCILLSLFAKEHLQHMT 98

Query: 271 EXQTMMYDRLINSPSNDWDIFYWIVEKKPTRXEFDNEIMNLLXXHAKNED-QIALRQPDL 95
           E Q  +YDRLIN PSNDWDI+YW  E KP    F+NE+M LL   AKN++ +  LR PDL
Sbjct: 99  EKQLNLYDRLINEPSNDWDIYYWATEAKPAPEIFENEVMALLRDFAKNKNKEQRLRAPDL 158


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,946,135
Number of Sequences: 237096
Number of extensions: 1660229
Number of successful extensions: 6491
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6365
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6491
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8735159784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)